Rroxscaffold_6G00411310

white-brown complex homolog protein 30

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
33819308 .. 33826994
7687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00411310.1

Sequence Viewer

Length: 3411 bp
ATGGCCGTGCATTTCTCCCCGCCGTTTCTTTTCACCCCCAAATTCCGGTCCTCCTTCAGAATCCACACGCTCCCCTCTCCCAGCTATTGTCGTTGCTCTCTAGCCCTCGCCGCGTTTCGGCCTTCATCCTCCATTGTTTGGCTATCACGCAACCGCCTGTTGCTCCTTGCGAACGGAGCATTTGAATTTTCACCATTATCAATTGCATTGTCGTCGGCGAAAGGGCTCATCACTCGAGACGAAGATGATTTCAGTAAGAACAAAAACCCGGCCACCCTTCCTCTTGTTACTCAGCTCTTGGAGAGCAAGCTTTCAAATCTCACCAAGTATTTAAGCAAAGACCTTAGAGGTCATATGGAGTACTGCATTAAGAATGTGGAAGATGATTGGAATGGAGCATTCAATTATACAGGGAAGCTTGAATTCCTGTCTAATTGTATAAAAAACTCGAAAGGTTTGATACTAACAGGAGAAGTCAGTAGTCGAATATGTACAGCAGCGGAAATGAGGTACTATTTCTCGAGTTTCACTAACATTGGGATCACTGACGATGGGGTACCGCATCAGTTAACCTACTTGAAACCAAACCTGAACTGCAACTTGACCAATTGGGAAGCCGGATGCGAACCTGGTTGGGGTTGTAGTCTTGATGGTGAGGACAAGGTTGACCTCAAAGCTTCACACATTCCTGCTAGAACTAGTGATTGTCAGCCTTGTTGTGAAGGTTTTTTCTGCCCTGAGGGAATCACTTGCATGATCCGTAAATATACTTACCAAGTACCTGCAGGAGAACCAAATCATACTTGTGGTGGTGCAGATGTTTGGACTGATGCTGGTAAAACTGATGTATTTTGTTCACCTGGTTCATACTGCCCCTCTACCATAAAGAAATACACTTGCAGTAGTGGGATGGGTTCCACTTATCAAAAACCATGCTTGAAGTTGACTGACTGTGGTCGAGGTACTGCAAATCAAAAGATTCATGCATACGGGATCTTCCTTGTTGTTGCACTGAGTTTTATTTTGATCATAATTTATAACTGCTCTGATCAAGTTCTGCTGATTCGGGAAAGAAAAGCAGCTAAGTCTAGGGAAGCTGCAGCAAGACATGCACGAGAAACTGCACAAGCACGCGAAAGATGGAAAACTGCAAAAGAAGGCCTTAAGAAGCGTAAAGTGGGATTGCAAGAGCAGATGTCCCGCACATTTTCTCGCAAAAAATCTGCAAGGAATTCAGAGCCTCTGAAGATTTCAGGTCAGCTTAAACCTGGTACAGATAATACTTCAACAGCACCAAAGATACCTGGTACATTAAGCTCATCTGAGCAATTATCACCAGCTTCAAAATCAAAGAATAAGGAACCAAGCAACCTTACCAAAATGTTGCAATCCCTAGACGATGATCCGCATAGTACTGAAGGCTTTAATCTTCAGATTGGTGATAAAAATATTAAAAAGCAAGCCCCAAAAGTTAAAAATCTGCACACTCACAGTCAAATTTTTAAGTATGCATATGGGCAACTCGAGAAGGAGAAAGCTATGCAACAAGAAAGCAAGAACTTGACCTTTACGGGTATAATCCAAATGGCCAAGGACACTGAGGTCAAGACTCGCCCTGCAATCGAAGTAGATTTTAAAGATTTAACTCTCACTCTGAAAGGAAAAGATAAAAATCTTTTGAGGAGTGTTACTGGAAAACTTTTTCCTGGTCGAGTTTCAGCAGTCATGGGTCCTTCAGGAGCTGGGAAAACAACATTTCTGTCTGCATTATCAGGAAAAGTAGCTGGATGCACTGTGACAGGTTCAATTCTAATAAATGGAAAAGCTGAACCAATGACTGCCTACAAGAGAATCATTGGCTTTGTGCCTCAAGACGATATTGTGCATGGAAACTTGACTGTGGAGGAGAATCTCCGATTTAGTGCAAGGTGCAGACTGTCTGCCAACATGCCAAAACCTGATAAAGTCCTGGTTGTTGAAAGAGTTATTGAGGCTCTGGGACTAGGGGCAGTGAGAGATTCTGTGGTTGGTACTGTGGAGAGGCGTGGAATCTCTGGAGGGCAAAGGAAACGTGTTAATGTTGGGTTAGAGATGGTCATGGAACCTTCATTGCTGATCTTGGATGAGCCTACGACGGGTTTGGACAGTGCATCTTCCCAGTTACTTCTTAAAGCCCTTCGACGTGAAGCTCGTGAAGGGGTAAACATCTGTATGGTACTTCACCAGCCAAGGATGTTTGATGATTTCATTCTTTTAGCCAAAGGTGGTCTTACTGTATATCATGGATCTGTAAAGAAAGTTGAAGAGTATTTTGCTGGCATCGGGATTGTTGTACCAGAACGTGTTAATCCTCCGGACTACTTCATTGACATTTTGGAAGGTATAGTGAAACCAAGCTCAGGTGTGAATCATGAAGAACTTCCAGTTAGATGGATGCTACATAATGGGTACCCAGTACCTCAAGATATGATGCACTATCTAGATGGAATTGCTGCAAGCTCAGCAGGCCCAAAACCTGTAATGAGGAGAGATCAATCTTTTGCTGGAGATTTGTGGCGGGATGTGAAGACTAATGTTGAGGTGAAAAAAGATCACCTAAGACATAACTTCCTAGTGTCCCAGGATTTATCAGAACGAATTACTCCTGGTATCTTCCGGCAGTACAGATATTACCTAGGGAGGGTAGGTAAGCAGCGGCTACGAGACGCTCAAATGCTGGCAGCGGATTATCTGATTATGTTACTTGCAGGAGCCATCTTAGGGATTTTTTCAAAAATGAATGATGAAACATTTGGTTTCAACGGCTACACTTACACTGTCATTGCTGTTTCACTACTTTGCAAAATATCAGCATTGAGAACCTTCTCTCTTGACAAATTACACTACTGGAGAGAGAGTGCATCCGGGATCAGCAGTCTGGCTCATTTTCTATCCAAAGATACAATGGACCATTTCAATACAGTCATCAAACCTTTGGTGTATCTGTCCACATTCTATTTCTTTAGCAACCCAAGGTCATCGTTTCAAGACAATTACATTGTTTTGCTCTGCCTTGTGTACTGTACGACTGGCATAGGTTACGCACTTGCCATCTACCTTGACCCGAGTCCTGCCCAACTGAGCTCAGTGCTTCTTCCCGTTGTACTGACCCTCATTGCAACCCAAGCTAAAGATAGTAAAATTGCAGGGCATGTAGCCAAGTTTTGCTACACAAAGTGGGCACTAGAAGCTTTTGTTATTGCAAATGCTGAAAGGTACTCTGGGGTGTGGCTGATCAGTCGCTGCACGGCATTATATAGAAGAGGCTATGACCTTAATGATTGGACCCTCTGTCTGGTCACCCTCATGGTCATCGGTTTACTTACTCGTATCTTGGCTTTCATTCTGTTGTTGATAACTCAAAAGAGGTAG

Protein Analysis

1136

Amino Acids

126.15

Weight (kDa)

9.22

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 560 - 712 3e-23 ABC transporter
ABC2_membrane_7 PF19055 744 - 1136 2.5e-206 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1038
AasI GACNNNNNNGTC 1 cut(s) 1601
Acc36I ACCTGC 1 cut(s) 790
Acc65I GGTACC 2 cut(s) 556, 2448
AccB1I GGYRCC 2 cut(s) 556, 2448
AccB7I CCANNNNNTGG 1 cut(s) 138
AccII CGCG 2 cut(s) 113, 1134
AccIII TCCGGA 1 cut(s) 2353
AclWI GGATC 6 cut(s) 548, 751, 1001, 1397, 2293, 2915
AcoI YGGCCR 3 cut(s) 3, 270, 1587
AcsI RAATTY 5 cut(s) 41, 185, 422, 1231, 1497
AcuI CTGAAG 5 cut(s) 40, 1265, 1415, 1437, 1719
AdeI CACNNNGTG 1 cut(s) 3216
AfiI CCNNNNNNNGG 9 cut(s) 45, 117, 138, 635, 2135, 2399, 2680, 2760, 3334
AflII CTTAAG 1 cut(s) 1163
AflIII ACRYGT 2 cut(s) 2071, 2341
AhdI GACNNNNNGTC 1 cut(s) 3330
AhlI ACTAGT 1 cut(s) 698
AjiI CACGTC 1 cut(s) 2183
AjnI CCWGG 8 cut(s) 628, 859, 1267, 1303, 1705, 1968, 2619, 2644
Alw21I GWGCWC 1 cut(s) 3125
Alw26I GTCTC 2 cut(s) 231, 2697
AlwI GGATC 6 cut(s) 548, 751, 1001, 1397, 2293, 2915
AlwNI CAGNNNCTG 2 cut(s) 1742, 3282
Ama87I CYCGRG 4 cut(s) 234, 520, 1523, 3103
Aor13HI TCCGGA 1 cut(s) 2353
AoxI GGCC 6 cut(s) 3, 119, 270, 1159, 1587, 2506
ApeKI GCWGC 8 cut(s) 497, 1079, 1097, 1100, 2492, 2692, 2720, 3282
ApoI RAATTY 5 cut(s) 41, 185, 422, 1231, 1497
Asp700I GAANNNNTTC 1 cut(s) 2418
Asp718I GGTACC 2 cut(s) 556, 2448
AspA2I CCTAGG 1 cut(s) 2674
AspS9I GGNCC 5 cut(s) 48, 1730, 2507, 2947, 3324
AsuC2I CCSGG 2 cut(s) 269, 2905
AvaI CYCGRG 4 cut(s) 234, 520, 1523, 3103
AvaII GGWCC 4 cut(s) 48, 1730, 2947, 3324
AvrII CCTAGG 1 cut(s) 2674
AxyI CCTNAGG 1 cut(s) 738
BaeGI GKGCMC 1 cut(s) 3223
BalI TGGCCA 1 cut(s) 1589
BanI GGYRCC 2 cut(s) 556, 2448
BanII GRGCYC 2 cut(s) 228, 3125
BauI CACGAG 2 cut(s) 1113, 2190
BbsI GAAGAC 1 cut(s) 2573
Bbv12I GWGCWC 1 cut(s) 3125
BbvI GCAGC 8 cut(s) 509, 1084, 1091, 1112, 2479, 2704, 2732, 3269
BccI CCATC 9 cut(s) 545, 644, 904, 1134, 2086, 2424, 2477, 2762, 3098
BceAI ACGGC 3 cut(s) 7, 2818, 3303
BcgI CGANNNNNNTGC 2 cut(s) 195, 229
BciT130I CCWGG 8 cut(s) 630, 861, 1269, 1305, 1707, 1970, 2621, 2646
BclI TGATCA 3 cut(s) 1026, 1048, 3273
BcnI CCSGG 2 cut(s) 269, 2905
BcoDI GTCTC 2 cut(s) 231, 2697
BcuI ACTAGT 1 cut(s) 698
BfmI CTRYAG 2 cut(s) 783, 1098
BfrI CTTAAG 1 cut(s) 1163
BfuAI ACCTGC 1 cut(s) 790
BlnI CCTAGG 1 cut(s) 2674
BlpI GCTNAGC 1 cut(s) 2500
BmcAI AGTACT 2 cut(s) 362, 1414
Bme18I GGWCC 4 cut(s) 48, 1730, 2947, 3324
BmeRI GACNNNNNGTC 1 cut(s) 3330
BmeT110I CYCGRG 4 cut(s) 234, 520, 1523, 3103
BmgBI CACGTC 1 cut(s) 2183
BmgT120I GGNCC 5 cut(s) 48, 1730, 2507, 2947, 3324
BmiI GGNNCC 8 cut(s) 558, 916, 1362, 1731, 2103, 2450, 2752, 3326
BmrI ACTGGG 2 cut(s) 2152, 2447
BmsI GCATC 9 cut(s) 571, 611, 820, 1778, 2159, 2328, 2424, 2460, 2909
BmuI ACTGGG 2 cut(s) 2152, 2447
BoxI GACNNNNGTC 2 cut(s) 954, 3105
BpiI GAAGAC 1 cut(s) 2573
BpmI CTGGAG 3 cut(s) 2076, 2565, 2908
Bpu10I CCTNAGC 1 cut(s) 2398
Bpu1102I GCTNAGC 1 cut(s) 2500
BpuEI CTTGAG 2 cut(s) 1854, 2445
BpuMI CCSGG 2 cut(s) 269, 2905
BsaBI GATNNNNATC 1 cut(s) 1671
BsaJI CCNNGG 5 cut(s) 1590, 2228, 2619, 2674, 3011
BsaWI WCCGGW 2 cut(s) 45, 2353
BsaXI ACNNNNNCTCC 4 cut(s) 2671, 2701, 2881, 2911
Bsc4I CCNNNNNNNGG 9 cut(s) 45, 117, 138, 635, 2135, 2399, 2680, 2760, 3334
Bse1I ACTGG 6 cut(s) 1696, 2158, 2423, 2453, 2891, 3073
Bse21I CCTNAGG 1 cut(s) 738
Bse3DI GCAATG 3 cut(s) 2108, 2820, 3153
Bse8I GATNNNNATC 1 cut(s) 1671
BseAI TCCGGA 1 cut(s) 2353
BseBI CCWGG 8 cut(s) 630, 861, 1269, 1305, 1707, 1970, 2621, 2646
BseDI CCNNGG 5 cut(s) 1590, 2228, 2619, 2674, 3011
BseGI GGATG 9 cut(s) 125, 626, 915, 1793, 2128, 2238, 2439, 2566, 2900
BseJI GATNNNNATC 1 cut(s) 1671
BseLI CCNNNNNNNGG 9 cut(s) 45, 117, 138, 635, 2135, 2399, 2680, 2760, 3334
BseMI GCAATG 3 cut(s) 2108, 2820, 3153
BseMII CTCAG 9 cut(s) 305, 729, 1004, 1314, 1590, 2412, 2514, 3110, 3138
BseNI ACTGG 6 cut(s) 1696, 2158, 2423, 2453, 2891, 3073
BseRI GAGGAG 3 cut(s) 1696, 1919, 2539
BseSI GKGCMC 1 cut(s) 3223
BseXI GCAGC 8 cut(s) 509, 1084, 1091, 1112, 2479, 2704, 2732, 3269
BseYI CCCAGC 2 cut(s) 80, 1742
BsgI GTGCAG 5 cut(s) 834, 1107, 1466, 1951, 3268
Bsh1236I CGCG 2 cut(s) 113, 1134
BshFI GGCC 6 cut(s) 5, 121, 272, 1161, 1589, 2508
BshNI GGYRCC 2 cut(s) 556, 2448
BsiHKAI GWGCWC 1 cut(s) 3125
BsiHKCI CYCGRG 4 cut(s) 234, 520, 1523, 3103
BsiSI CCGG 6 cut(s) 46, 269, 618, 2354, 2656, 2904
BslFI GGGAC 3 cut(s) 1183, 2013, 2602
BslI CCNNNNNNNGG 9 cut(s) 45, 117, 138, 635, 2135, 2399, 2680, 2760, 3334
BsmAI GTCTC 2 cut(s) 231, 2697
BsmBI CGTCTC 2 cut(s) 231, 2697
BsmFI GGGAC 3 cut(s) 1183, 2013, 2602
BsmI GAATGC 1 cut(s) 398
BsnI GGCC 6 cut(s) 5, 121, 272, 1161, 1589, 2508
BsoBI CYCGRG 4 cut(s) 234, 520, 1523, 3103
Bsp1286I GDGCHC 3 cut(s) 228, 3125, 3223
Bsp13I TCCGGA 1 cut(s) 2353
Bsp1407I TGTACA 1 cut(s) 491
Bsp1720I GCTNAGC 1 cut(s) 2500
BspANI GGCC 6 cut(s) 5, 121, 272, 1161, 1589, 2508
BspCNI CTCAG 9 cut(s) 304, 730, 1005, 1315, 1591, 2411, 2513, 3111, 3137
BspEI TCCGGA 1 cut(s) 2353
BspFNI CGCG 2 cut(s) 113, 1134
BspHI TCATGA 1 cut(s) 2410
BspLI GGNNCC 8 cut(s) 558, 916, 1362, 1731, 2103, 2450, 2752, 3326
BspMAI CTGCAG 2 cut(s) 787, 1102
BspMI ACCTGC 1 cut(s) 790
BspPI GGATC 6 cut(s) 548, 751, 1001, 1397, 2293, 2915
BspT107I GGYRCC 2 cut(s) 556, 2448
BspTI CTTAAG 1 cut(s) 1163
BsrDI GCAATG 3 cut(s) 2108, 2820, 3153
BsrGI TGTACA 1 cut(s) 491
BsrI ACTGG 6 cut(s) 1696, 2158, 2423, 2453, 2891, 3073
BssECI CCNNGG 5 cut(s) 1590, 2228, 2619, 2674, 3011
BssSI CACGAG 2 cut(s) 1113, 2190
BssT1I CCWWGG 4 cut(s) 1590, 2228, 2674, 3011
Bst2BI CACGAG 2 cut(s) 1113, 2190
Bst2UI CCWGG 8 cut(s) 630, 861, 1269, 1305, 1707, 1970, 2621, 2646
Bst6I CTCTTC 2 cut(s) 2298, 3295
BstAFI CTTAAG 1 cut(s) 1163
BstAPI GCANNNNNTGC 1 cut(s) 1109
BstAUI TGTACA 1 cut(s) 491
BstC8I GCNNGC 7 cut(s) 308, 1132, 1461, 2317, 2497, 2506, 2718
BstEII GGTNACC 1 cut(s) 3337
BstF5I GGATG 9 cut(s) 125, 626, 915, 1793, 2128, 2238, 2439, 2566, 2900
BstFNI CGCG 2 cut(s) 113, 1134
BstMAI GTCTC 2 cut(s) 231, 2697
BstMWI GCNNNNNNNGC 7 cut(s) 110, 176, 1109, 2501, 2505, 3164, 3227
BstNI CCWGG 8 cut(s) 630, 861, 1269, 1305, 1707, 1970, 2621, 2646
BstNSI RCATGY 3 cut(s) 1112, 1951, 3194
BstPAI GACNNNNGTC 2 cut(s) 954, 3105
BstPI GGTNACC 1 cut(s) 3337
BstSFI CTRYAG 2 cut(s) 783, 1098
BstSLI GKGCMC 1 cut(s) 3223
BstUI CGCG 2 cut(s) 113, 1134
BstV1I GCAGC 8 cut(s) 509, 1084, 1091, 1112, 2479, 2704, 2732, 3269
BstV2I GAAGAC 1 cut(s) 2573
BstX2I RGATCY 2 cut(s) 993, 2285
BstXI CCANNNNNNTGG 1 cut(s) 2430
BstYI RGATCY 2 cut(s) 993, 2285
Bsu36I CCTNAGG 1 cut(s) 738
BsuRI GGCC 6 cut(s) 5, 121, 272, 1161, 1589, 2508
BtrI CACGTC 1 cut(s) 2183
BtsCI GGATG 9 cut(s) 125, 626, 915, 1793, 2128, 2238, 2439, 2566, 2900
BtsI GCAGTG 1 cut(s) 2016
BtsIMutI CAGTG 8 cut(s) 543, 1010, 1596, 1791, 2016, 2152, 2814, 3132
BveI ACCTGC 1 cut(s) 790
Cac8I GCNNGC 7 cut(s) 308, 1132, 1461, 2317, 2497, 2506, 2718
CaiI CAGNNNCTG 2 cut(s) 1742, 3282
CciI TCATGA 1 cut(s) 2410
Cfr13I GGNCC 5 cut(s) 48, 1730, 2507, 2947, 3324
CseI GACGC 1 cut(s) 2714
CsiI ACCWGGT 4 cut(s) 628, 859, 1267, 1303
DraI TTTAAA 1 cut(s) 1636
DraIII CACNNNGTG 1 cut(s) 3216
DrdI GACNNNNNNGTC 1 cut(s) 1601
DriI GACNNNNNGTC 1 cut(s) 3330
DseDI GACNNNNNNGTC 1 cut(s) 1601
EaeI YGGCCR 3 cut(s) 3, 270, 1587
Eam1104I CTCTTC 2 cut(s) 2298, 3295
Eam1105I GACNNNNNGTC 1 cut(s) 3330
EarI CTCTTC 2 cut(s) 2298, 3295
Ecl136II GAGCTC 1 cut(s) 3123
Eco130I CCWWGG 4 cut(s) 1590, 2228, 2674, 3011
Eco147I AGGCCT 1 cut(s) 1161
Eco24I GRGCYC 2 cut(s) 228, 3125
Eco47I GGWCC 4 cut(s) 48, 1730, 2947, 3324
Eco53kI GAGCTC 1 cut(s) 3123
Eco57I CTGAAG 5 cut(s) 40, 1265, 1415, 1437, 1719
Eco81I CCTNAGG 1 cut(s) 738
Eco88I CYCGRG 4 cut(s) 234, 520, 1523, 3103
Eco91I GGTNACC 1 cut(s) 3337
EcoICRI GAGCTC 1 cut(s) 3123
EcoO109I RGGNCCY 1 cut(s) 1730
EcoO65I GGTNACC 1 cut(s) 3337
EcoRI GAATTC 2 cut(s) 422, 1231
EcoRII CCWGG 8 cut(s) 628, 859, 1267, 1303, 1705, 1968, 2619, 2644
EcoT14I CCWWGG 4 cut(s) 1590, 2228, 2674, 3011
EcoT22I ATGCAT 2 cut(s) 988, 1513
EcoT38I GRGCYC 2 cut(s) 228, 3125
ErhI CCWWGG 4 cut(s) 1590, 2228, 2674, 3011
Esp3I CGTCTC 2 cut(s) 231, 2697
FalI AAGNNNNNCTT 4 cut(s) 1146, 1178, 2253, 2285
FaqI GGGAC 3 cut(s) 1183, 2013, 2602
FauI CCCGC 3 cut(s) 27, 1208, 2550
FauNDI CATATG 2 cut(s) 354, 1513
FbaI TGATCA 3 cut(s) 1026, 1048, 3273
FokI GGATG 9 cut(s) 112, 633, 922, 1800, 2135, 2245, 2446, 2573, 2887
FriOI GRGCYC 2 cut(s) 228, 3125
GsaI CCCAGC 2 cut(s) 84, 1746
GsuI CTGGAG 3 cut(s) 2076, 2565, 2908
HaeIII GGCC 6 cut(s) 5, 121, 272, 1161, 1589, 2508
HapII CCGG 6 cut(s) 46, 269, 618, 2354, 2656, 2904
HgaI GACGC 1 cut(s) 2714
HincII GTYRAC 3 cut(s) 570, 667, 945
HindII GTYRAC 3 cut(s) 570, 667, 945
HindIII AAGCTT 4 cut(s) 308, 416, 675, 3228
HpaI GTTAAC 1 cut(s) 570
HpaII CCGG 6 cut(s) 46, 269, 618, 2354, 2656, 2904
Hpy166II GTNNAC 8 cut(s) 570, 667, 857, 945, 2203, 2988, 3058, 3359
Hpy8I GTNNAC 8 cut(s) 570, 667, 857, 945, 2203, 2988, 3058, 3359
Hpy99I CGWCG 3 cut(s) 217, 2137, 2184
HpyCH4IV ACGT 3 cut(s) 2071, 2182, 2341
HpyF10VI GCNNNNNNNGC 7 cut(s) 110, 176, 1109, 2501, 2505, 3164, 3227
HpySE526I ACGT 3 cut(s) 2071, 2182, 2341
Kpn2I TCCGGA 1 cut(s) 2353
KpnI GGTACC 2 cut(s) 560, 2452
Ksp22I TGATCA 3 cut(s) 1026, 1048, 3273
KspAI GTTAAC 1 cut(s) 570
LmnI GCTCC 6 cut(s) 75, 168, 176, 395, 1739, 2750
Lsp1109I GCAGC 8 cut(s) 509, 1084, 1091, 1112, 2479, 2704, 2732, 3269
LweI GCATC 9 cut(s) 571, 611, 820, 1778, 2159, 2328, 2424, 2460, 2909
MabI ACCWGGT 4 cut(s) 628, 859, 1267, 1303
MaeII ACGT 3 cut(s) 2071, 2182, 2341
MaeIII GTNAC 7 cut(s) 286, 1687, 1795, 2160, 2739, 3077, 3337
MfeI CAATTG 2 cut(s) 201, 607
MflI RGATCY 2 cut(s) 993, 2285
MhlI GDGCHC 3 cut(s) 228, 3125, 3223
MlsI TGGCCA 1 cut(s) 1589
MluNI TGGCCA 1 cut(s) 1589
MlyI GAGTC 2 cut(s) 1603, 3115
Mox20I TGGCCA 1 cut(s) 1589
Mph1103I ATGCAT 2 cut(s) 988, 1513
MroI TCCGGA 1 cut(s) 2353
MroXI GAANNNNTTC 1 cut(s) 2418
MscI TGGCCA 1 cut(s) 1589
MslI CAYNNNNRTG 4 cut(s) 752, 804, 2210, 3344
Msp20I TGGCCA 1 cut(s) 1589
MspA1I CMGCKG 3 cut(s) 500, 2695, 2723
MspCI CTTAAG 1 cut(s) 1163
MspI CCGG 6 cut(s) 46, 269, 618, 2354, 2656, 2904
MunI CAATTG 2 cut(s) 201, 607
Mva1269I GAATGC 1 cut(s) 398
MvaI CCWGG 8 cut(s) 630, 861, 1269, 1305, 1707, 1970, 2621, 2646
MvnI CGCG 2 cut(s) 113, 1134
MwoI GCNNNNNNNGC 7 cut(s) 110, 176, 1109, 2501, 2505, 3164, 3227
NciI CCSGG 2 cut(s) 269, 2905
NdeI CATATG 2 cut(s) 354, 1513
NlaIV GGNNCC 8 cut(s) 558, 916, 1362, 1731, 2103, 2450, 2752, 3326
NmuCI GTSAC 2 cut(s) 1795, 3337
NsiI ATGCAT 2 cut(s) 988, 1513
NspI RCATGY 3 cut(s) 1112, 1951, 3194
PaeR7I CTCGAG 3 cut(s) 234, 520, 1523
PagI TCATGA 1 cut(s) 2410
PceI AGGCCT 1 cut(s) 1161
PcsI WCGNNNNNNNCGW 1 cut(s) 2188
PctI GAATGC 1 cut(s) 398
PdmI GAANNNNTTC 1 cut(s) 2418
PfeI GAWTC 9 cut(s) 60, 744, 979, 1063, 1851, 1909, 2018, 2049, 2407
PflMI CCANNNNNTGG 1 cut(s) 138
PfoI TCCNGGA 1 cut(s) 2903
PleI GAGTC 2 cut(s) 1603, 3114
PpsI GAGTC 2 cut(s) 1603, 3114
PpuMI RGGWCCY 1 cut(s) 1730
PshAI GACNNNNGTC 2 cut(s) 954, 3105
PsiI TTATAA 1 cut(s) 1038
Psp124BI GAGCTC 1 cut(s) 3125
Psp5II RGGWCCY 1 cut(s) 1730
Psp6I CCWGG 8 cut(s) 628, 859, 1267, 1303, 1705, 1968, 2619, 2644
PspEI GGTNACC 1 cut(s) 3337
PspFI CCCAGC 2 cut(s) 80, 1742
PspGI CCWGG 8 cut(s) 628, 859, 1267, 1303, 1705, 1968, 2619, 2644
PspN4I GGNNCC 8 cut(s) 558, 916, 1362, 1731, 2103, 2450, 2752, 3326
PspPI GGNCC 5 cut(s) 48, 1730, 2507, 2947, 3324
PspPPI RGGWCCY 1 cut(s) 1730
PstI CTGCAG 2 cut(s) 787, 1102
PstNI CAGNNNCTG 2 cut(s) 1742, 3282
PsuI RGATCY 2 cut(s) 993, 2285
RseI CAYNNNNRTG 4 cut(s) 752, 804, 2210, 3344
SacI GAGCTC 1 cut(s) 3125
Sau96I GGNCC 5 cut(s) 48, 1730, 2507, 2947, 3324
SbfI CCTGCAGG 1 cut(s) 787
ScaI AGTACT 2 cut(s) 362, 1414
SchI GAGTC 2 cut(s) 1603, 3115
SdaI CCTGCAGG 1 cut(s) 787
SduI GDGCHC 3 cut(s) 228, 3125, 3223
SexAI ACCWGGT 4 cut(s) 628, 859, 1267, 1303
SfaNI GCATC 9 cut(s) 571, 611, 820, 1778, 2159, 2328, 2424, 2460, 2909
SfcI CTRYAG 2 cut(s) 783, 1098
Sfr274I CTCGAG 3 cut(s) 234, 520, 1523
SinI GGWCC 4 cut(s) 48, 1730, 2947, 3324
SlaI CTCGAG 3 cut(s) 234, 520, 1523
SmiMI CAYNNNNRTG 4 cut(s) 752, 804, 2210, 3344
SmlI CTYRAG 6 cut(s) 234, 520, 1163, 1523, 1869, 2460
SmoI CTYRAG 6 cut(s) 234, 520, 1163, 1523, 1869, 2460
SpeI ACTAGT 1 cut(s) 698
Sse8387I CCTGCAGG 1 cut(s) 787
SseBI AGGCCT 1 cut(s) 1161
SspI AATATT 1 cut(s) 1450
SstI GAGCTC 1 cut(s) 3125
StuI AGGCCT 1 cut(s) 1161
StyI CCWWGG 4 cut(s) 1590, 2228, 2674, 3011
TaiI ACGT 3 cut(s) 2074, 2185, 2344
TaqI TCGA 9 cut(s) 235, 449, 484, 521, 958, 1524, 1623, 1711, 2179
TatI WGTACW 6 cut(s) 360, 491, 1412, 2661, 3057, 3142
TauI GCSGC 2 cut(s) 113, 2698
TfiI GAWTC 9 cut(s) 60, 744, 979, 1063, 1851, 1909, 2018, 2049, 2407
TscAI CASTG 8 cut(s) 550, 1017, 1603, 1798, 2016, 2152, 2821, 3132
TseFI GTSAC 2 cut(s) 1795, 3337
TseI GCWGC 8 cut(s) 497, 1079, 1097, 1100, 2492, 2692, 2720, 3282
Tsp45I GTSAC 2 cut(s) 1795, 3337
TspGWI ACGGA 2 cut(s) 189, 749
TspRI CASTG 8 cut(s) 550, 1017, 1603, 1798, 2016, 2152, 2821, 3132
Van91I CCANNNNNTGG 1 cut(s) 138
Vha464I CTTAAG 1 cut(s) 1163
VpaK11BI GGWCC 4 cut(s) 48, 1730, 2947, 3324
XapI RAATTY 5 cut(s) 41, 185, 422, 1231, 1497
XbaI TCTAGA 1 cut(s) 2479
XceI RCATGY 3 cut(s) 1112, 1951, 3194
XcmI CCANNNNNNNNNTGG 1 cut(s) 2941
XhoI CTCGAG 3 cut(s) 234, 520, 1523
XmaJI CCTAGG 1 cut(s) 2674
XmnI GAANNNNTTC 1 cut(s) 2418
ZrmI AGTACT 2 cut(s) 362, 1414
Zsp2I ATGCAT 2 cut(s) 988, 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.