Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008347.1

Orthogroup ID

OG0003497

Physical Location & Seq

Genomic Coordinates Reverse (-)

24286 .. 32305

Gene Structure 8020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008347.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3072 bp

atggccgcacatttctccccgccttttctttacaccaccaaattccggtcctccttcagaatccacacgctcccctctcccagctattgtcgttgctctccagccctcgccgcgtttcggccttcatcctccattgtttggctatcacgcaaccgcctgttgctccttgcaagcggagcatttgaattttcaccattctcaattgcattgtcgtcggagaaggggctcattactcgagttttgttttggtggtgtcgcatgcaagtgaggatcagagcccgttggtttccccatgttgtgttcatcgtcgttttgagattgttgccgtgctttttgtgtcaggacgaagatgatttcagtaagaacaaaaacccggccacgcttcctcttgttactcagctcttggagagcaagctttcaaatctcaccaagtatttaagcaaagaccttagaggtcatatggagtactgcattaagaatgtggaagatgattggaatggagcattcaattatacggggaggcttgaattcctgtctaattgtataaaaaactcgaaaggagaagtcagtagtcgaatatgtacagcagcggaaatgaggtactatttctcgagtttcactaacattgggatcactgacgatggggtaccgcatcagttaacctacttgaaaccaaacctgaactgcaacttgaccaattgggaagccggatgcgaacctggttggggttgtagtcttgatggtgaggacaaggttgacctcaaagtttcacacattcctgctagaaccactgattgtcagccttgttgtgaaggttttttctgccctgagggaatcacttgcatgatcccatgcttgaagttgactgactgtggtcgaggtactgcaaatcaaaagattcatgcatacgggatcttccttgttgttgcactgagttttattttgatcataatttataactgctctgatcaagttctgctgattcgggaaagaaaagcagctaagtctagggaagctgcagcaagacatgcacgagaaactgcacaagcacgcgaaagatggaaagctgcaaaagaaggccttaagaagcgtaaagtgggattgcaagagcagatgtcccgcacattttctcgcaaaaaatctacaaggaattcagagcctctgaagatttcaggtcatcttaaacctggtacagatcatacttcaacagcacctaagatacctggtacattaagctcatctgagcaattatcaccagcttcaaaatcaaagaataaggaaccaagcaaccttacccaaatgttgcaatccctagacgatgatccgcatagtactgaaggctttaatcttcagattggtgataaaaatattaaaaggcaagccccaaaagttaaaaatctgcatactcacagtcaaatttttaagtatgcatatggccaactcgagaaggagaaagctatgcaacaagaaagcaagaacttgacctttacgggtataatccaaatggccaaggacactgaggtcaagactcgccctgcgatcgaagtagattttaaagatttaactctcactctgaaaggaaaagataaaaatcttttgaggagtgttactggaaaactttttcctggtcgagtttcagcagtcatgggcccttcaggagctgggaaaacaacatttctgtctgcattatcaggaaaagtaactggatgcactgtgacaggttcaattctaataaatggaaaagctgaaccaatgactgcctacaagagaatcattggctttgtgcctcaagacgatgttgtgcacggaaacttgactgtggaggagaatctccgatttagtgcaaggtgcagactgtctgccaacatgccaaaacctgataaagtcctggttgttgaaagagttattgaggctctgggactaggggcagtgagagattccgtggttggtactgtggagaagcgtggaatctctggagggcaaaggaaacgtgttaatgttgggttagagatggtcatggaaccttcattgctgatcttggatgagcctacgacgggtttggacagtgcatcttcccagttacttcttaaagcccttcgacgtgaagctcgtgaaggggtaaacatctgtatggtacttcaccagccaagctattccttattcaggatgtttgatgatttcattcttttagccaaaggtggtcttactgtatatcatggatctgtaaagaaagttgaagagtattttgctggcatcgggattgttgtaccagaacgtgttaatcctccggactacttcattgacattttggaaggtatagtgaaaccaagctcaggtgtgaatcatgaagaacttccagttagatggatgctacataatgggtacccagtgcctcaagatatgatgcactatctagatggaattgctgcaagctcagcaggcccaaaacctgtaatgaggagagatcaatcttttgctggagatttgtggcgggatgtgaagactaatgttgaggtgaaaaaagatcacttaagacataacttcctagtgtcccaggatttatcagaccgaattactcctggtatcttccggcagtacagatattacctagggagggtaggtaagcagcggcttcgagacgctcaaatgctggcagcggattatctgattatgttacttgccggagccatcttggggattttttcaaaaatgaatgatgaaacatttggtttcaacggctacacttatactgtcattgctgttttgagcggctcagaatttggtctggatgttgaagactatcttgttggtatttgcttcatgtctaatgaactgcctaggtatgtggttaaccaagtgacagctggggattatgattgcccaagaaaggtgatgaagtttttgacagacctccatgcagccttccgactgctcaatcttcgaaatgactttttgcgcaagaaatttgatggtatgaagtatgacctaagaagagttgaagaggtttactatgatgtaaagatccgaggcttggcagccaatgtggattctgtggaaaaggcagcagcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1023

Amino Acids

114.6

Weight (kDa)

9.18

Isoelectric Point (pI)

39.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37010 AT2G37010
fragaria_vesca	FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150
malus_domestica	MD12G1115400.v1.1
prunus_persica	Prupe.6G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0469991
rosa_laevigata	RLG00000024306
rosa_multiflora	Rmu_sc0000831.1_g000026 Rmu_sc0003342.1_g000004 Rmu_sc0007963.1_g000003 Rmu_sc0008347.1_g000006 Rmu_sc0020091.1_g000002 Rmu_ssc0000397.1_g000046
rosa_roxburghii	Rroxscaffold_6G00411310
rosa_rugosa	Rorug03G0105900 Rorug03G0105900
rosa_samantha	Rh1AG175800 Rh1CG163700 Rh2BG425000 Rh3AG155000 Rh3BG179100 Rh3CG169700 Rh3DG196100 Rh4CG158900 Rh5AG391600 Rh5CG032200 Rh7CG425900
rosa_wichuraiana	Rw3G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	957
AasI	GACNNNNNNGTC	1 cut(s)	1520
Acc16I	TGCGCA	1 cut(s)	2957
Acc65I	GGTACC	2 cut(s)	646, 2382
AccB1I	GGYRCC	2 cut(s)	646, 2382
AccB7I	CCANNNNNTGG	1 cut(s)	138
AccBSI	CCGCTC	1 cut(s)	2769
AccII	CGCG	2 cut(s)	113, 1053
AccIII	TCCGGA	1 cut(s)	2287
AclWI	GGATC	7 cut(s)	278, 638, 841, 920, 1316, 2227, 3016
AcoI	YGGCCR	4 cut(s)	3, 375, 1435, 1506
AcsI	RAATTY	7 cut(s)	41, 185, 527, 1150, 1416, 2777, 2963
AcuI	CTGAAG	5 cut(s)	40, 1184, 1334, 1356, 1638
AflII	CTTAAG	2 cut(s)	1082, 2530
AflIII	ACRYGT	2 cut(s)	1990, 2275
AjiI	CACGTC	1 cut(s)	2102
AjnI	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
Alw21I	GWGCWC	1 cut(s)	1806
Alw26I	GTCTC	1 cut(s)	2631
Alw44I	GTGCAC	1 cut(s)	1802
AlwI	GGATC	7 cut(s)	278, 638, 841, 920, 1316, 2227, 3016
AlwNI	CAGNNNCTG	1 cut(s)	1661
Ama87I	CYCGRG	3 cut(s)	234, 610, 1442
Aor13HI	TCCGGA	1 cut(s)	2287
AoxI	GGCC	8 cut(s)	3, 119, 375, 1078, 1435, 1506, 1648, 2440
ApaI	GGGCCC	1 cut(s)	1652
ApaLI	GTGCAC	1 cut(s)	1802
ApoI	RAATTY	7 cut(s)	41, 185, 527, 1150, 1416, 2777, 2963
Asp700I	GAANNNNTTC	1 cut(s)	2352
Asp718I	GGTACC	2 cut(s)	646, 2382
AspA2I	CCTAGG	2 cut(s)	2608, 2837
AspLEI	GCGC	1 cut(s)	2958
AspS9I	GGNCC	4 cut(s)	48, 1648, 1649, 2441
AsuC2I	CCSGG	1 cut(s)	374
AsuHPI	GGTGA	8 cut(s)	183, 418, 755, 1245, 1370, 2132, 2527, 2902
AsuII	TTCGAA	1 cut(s)	2941
AvaI	CYCGRG	3 cut(s)	234, 610, 1442
AvaII	GGWCC	1 cut(s)	48
AvrII	CCTAGG	2 cut(s)	2608, 2837
AxyI	CCTNAGG	1 cut(s)	828
BaeGI	GKGCMC	2 cut(s)	1652, 1806
BalI	TGGCCA	2 cut(s)	1437, 1508
BanI	GGYRCC	2 cut(s)	646, 2382
BanII	GRGCYC	3 cut(s)	228, 280, 1652
BauI	CACGAG	2 cut(s)	1032, 2109
BbsI	GAAGAC	2 cut(s)	2507, 2802
Bbv12I	GWGCWC	1 cut(s)	1806
BccI	CCATC	8 cut(s)	635, 734, 1053, 2005, 2358, 2411, 2696, 2963
BceAI	ACGGC	2 cut(s)	310, 2752
BcgI	CGANNNNNNTGC	4 cut(s)	195, 229, 2615, 2649
BciT130I	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
BclI	TGATCA	2 cut(s)	945, 967
BcnI	CCSGG	1 cut(s)	374
BcoDI	GTCTC	1 cut(s)	2631
BfaI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 2838
BfmI	CTRYAG	1 cut(s)	1017
BfrI	CTTAAG	2 cut(s)	1082, 2530
BlnI	CCTAGG	2 cut(s)	2608, 2837
BlpI	GCTNAGC	1 cut(s)	2434
BmcAI	AGTACT	2 cut(s)	467, 1333
Bme1390I	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
Bme18I	GGWCC	1 cut(s)	48
BmeT110I	CYCGRG	3 cut(s)	234, 610, 1442
BmgBI	CACGTC	1 cut(s)	2102
BmgT120I	GGNCC	4 cut(s)	48, 1648, 1649, 2441
BmiI	GGNNCC	6 cut(s)	648, 1281, 1650, 2022, 2384, 2686
BmrFI	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
BmrI	ACTGGG	2 cut(s)	2071, 2381
BmsI	GCATC	7 cut(s)	661, 701, 1697, 2078, 2262, 2358, 2394
BmuI	ACTGGG	2 cut(s)	2071, 2381
BoxI	GACNNNNGTC	1 cut(s)	873
BpiI	GAAGAC	2 cut(s)	2507, 2802
BpmI	CTGGAG	3 cut(s)	84, 1995, 2499
Bpu10I	CCTNAGC	1 cut(s)	2332
Bpu1102I	GCTNAGC	1 cut(s)	2434
Bpu14I	TTCGAA	1 cut(s)	2941
BpuEI	CTTGAG	2 cut(s)	1773, 2379
BpuMI	CCSGG	1 cut(s)	374
BsaBI	GATNNNNATC	1 cut(s)	1590
BsaJI	CCNNGG	6 cut(s)	1509, 1941, 2553, 2608, 2837, 3025
BsaWI	WCCGGW	2 cut(s)	45, 2287
BsaXI	ACNNNNNCTCC	2 cut(s)	2605, 2635
Bse1I	ACTGG	5 cut(s)	1615, 1708, 2077, 2357, 2387
Bse21I	CCTNAGG	1 cut(s)	828
Bse3DI	GCAATG	2 cut(s)	2027, 2754
Bse8I	GATNNNNATC	1 cut(s)	1590
BseAI	TCCGGA	1 cut(s)	2287
BseBI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
BseDI	CCNNGG	6 cut(s)	1509, 1941, 2553, 2608, 2837, 3025
BseGI	GGATG	8 cut(s)	125, 716, 1712, 2047, 2172, 2373, 2500, 2794
BseJI	GATNNNNATC	1 cut(s)	1590
BseMI	GCAATG	2 cut(s)	2027, 2754
BseMII	CTCAG	8 cut(s)	410, 819, 923, 1233, 1509, 2346, 2448, 2787
BseNI	ACTGG	5 cut(s)	1615, 1708, 2077, 2357, 2387
BseRI	GAGGAG	3 cut(s)	1615, 1838, 2473
BseSI	GKGCMC	2 cut(s)	1652, 1806
BseYI	CCCAGC	3 cut(s)	80, 1661, 2864
BsgI	GTGCAG	2 cut(s)	1026, 1870
Bsh1236I	CGCG	2 cut(s)	113, 1053
Bsh1285I	CGRYCG	1 cut(s)	1542
BshFI	GGCC	8 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2442
BshNI	GGYRCC	2 cut(s)	646, 2382
BsiEI	CGRYCG	1 cut(s)	1542
BsiHKAI	GWGCWC	1 cut(s)	1806
BsiHKCI	CYCGRG	3 cut(s)	234, 610, 1442
BsiSI	CCGG	6 cut(s)	46, 374, 708, 2288, 2590, 2682
BslFI	GGGAC	3 cut(s)	1102, 1932, 2536
BsmAI	GTCTC	1 cut(s)	2631
BsmBI	CGTCTC	1 cut(s)	2631
BsmFI	GGGAC	3 cut(s)	1102, 1932, 2536
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	8 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2442
BsoBI	CYCGRG	3 cut(s)	234, 610, 1442
Bsp119I	TTCGAA	1 cut(s)	2941
Bsp120I	GGGCCC	1 cut(s)	1648
Bsp1286I	GDGCHC	4 cut(s)	228, 280, 1652, 1806
Bsp13I	TCCGGA	1 cut(s)	2287
Bsp1407I	TGTACA	1 cut(s)	581
Bsp1720I	GCTNAGC	1 cut(s)	2434
BspANI	GGCC	8 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2442
BspCNI	CTCAG	8 cut(s)	409, 820, 924, 1234, 1510, 2345, 2447, 2786
BspEI	TCCGGA	1 cut(s)	2287
BspFNI	CGCG	2 cut(s)	113, 1053
BspHI	TCATGA	1 cut(s)	2344
BspLI	GGNNCC	6 cut(s)	648, 1281, 1650, 2022, 2384, 2686
BspMAI	CTGCAG	1 cut(s)	1021
BspPI	GGATC	7 cut(s)	278, 638, 841, 920, 1316, 2227, 3016
BspT104I	TTCGAA	1 cut(s)	2941
BspT107I	GGYRCC	2 cut(s)	646, 2382
BspTI	CTTAAG	2 cut(s)	1082, 2530
BsrBI	CCGCTC	1 cut(s)	2769
BsrDI	GCAATG	2 cut(s)	2027, 2754
BsrGI	TGTACA	1 cut(s)	581
BsrI	ACTGG	5 cut(s)	1615, 1708, 2077, 2357, 2387
BssECI	CCNNGG	6 cut(s)	1509, 1941, 2553, 2608, 2837, 3025
BssSI	CACGAG	2 cut(s)	1032, 2109
BssT1I	CCWWGG	3 cut(s)	1509, 2608, 2837
Bst2BI	CACGAG	2 cut(s)	1032, 2109
Bst2UI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
Bst4CI	ACNGT	9 cut(s)	872, 1412, 1714, 1819, 1857, 1954, 2066, 2209, 2752
Bst6I	CTCTTC	3 cut(s)	2232, 2986, 2994
BstAFI	CTTAAG	2 cut(s)	1082, 2530
BstAPI	GCANNNNNTGC	1 cut(s)	1028
BstAUI	TGTACA	1 cut(s)	581
BstBI	TTCGAA	1 cut(s)	2941
BstC8I	GCNNGC	9 cut(s)	172, 260, 413, 1051, 1380, 2251, 2431, 2440, 2652
BstDSI	CCRYGG	1 cut(s)	1941
BstENI	CCTNNNNNAGG	1 cut(s)	2161
BstF5I	GGATG	8 cut(s)	125, 716, 1712, 2047, 2172, 2373, 2500, 2794
BstFNI	CGCG	2 cut(s)	113, 1053
BstHHI	GCGC	1 cut(s)	2958
BstMAI	GTCTC	1 cut(s)	2631
BstMCI	CGRYCG	1 cut(s)	1542
BstMWI	GCNNNNNNNGC	5 cut(s)	110, 176, 1028, 2435, 2439
BstNI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
BstNSI	RCATGY	3 cut(s)	262, 1031, 1870
BstPAI	GACNNNNGTC	1 cut(s)	873
BstSCI	CCNGG	8 cut(s)	372, 718, 1186, 1222, 1624, 1887, 2553, 2578
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	2 cut(s)	1652, 1806
BstUI	CGCG	2 cut(s)	113, 1053
BstV2I	GAAGAC	2 cut(s)	2507, 2802
BstX2I	RGATCY	3 cut(s)	912, 2219, 3021
BstXI	CCANNNNNNTGG	1 cut(s)	2364
BstYI	RGATCY	3 cut(s)	912, 2219, 3021
Bsu36I	CCTNAGG	1 cut(s)	828
BsuRI	GGCC	8 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2442
BtgI	CCRYGG	1 cut(s)	1941
BtrI	CACGTC	1 cut(s)	2102
BtsCI	GGATG	8 cut(s)	125, 716, 1712, 2047, 2172, 2373, 2500, 2794
BtsI	GCAGTG	1 cut(s)	1935
BtsIMutI	CAGTG	8 cut(s)	633, 789, 929, 1515, 1710, 1935, 2071, 2394
Cac8I	GCNNGC	9 cut(s)	172, 260, 413, 1051, 1380, 2251, 2431, 2440, 2652
CaiI	CAGNNNCTG	1 cut(s)	1661
CciI	TCATGA	1 cut(s)	2344
CfoI	GCGC	1 cut(s)	2958
Cfr13I	GGNCC	4 cut(s)	48, 1648, 1649, 2441
CseI	GACGC	1 cut(s)	2648
CsiI	ACCWGGT	3 cut(s)	718, 1186, 1222
DraI	TTTAAA	1 cut(s)	1555
DrdI	GACNNNNNNGTC	1 cut(s)	1520
DseDI	GACNNNNNNGTC	1 cut(s)	1520
EaeI	YGGCCR	4 cut(s)	3, 375, 1435, 1506
Eam1104I	CTCTTC	3 cut(s)	2232, 2986, 2994
EarI	CTCTTC	3 cut(s)	2232, 2986, 2994
Eco130I	CCWWGG	3 cut(s)	1509, 2608, 2837
Eco147I	AGGCCT	1 cut(s)	1080
Eco24I	GRGCYC	3 cut(s)	228, 280, 1652
Eco47I	GGWCC	1 cut(s)	48
Eco57I	CTGAAG	5 cut(s)	40, 1184, 1334, 1356, 1638
Eco81I	CCTNAGG	1 cut(s)	828
Eco88I	CYCGRG	3 cut(s)	234, 610, 1442
EcoNI	CCTNNNNNAGG	1 cut(s)	2161
EcoO109I	RGGNCCY	1 cut(s)	1649
EcoRI	GAATTC	2 cut(s)	527, 1150
EcoRII	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
EcoT14I	CCWWGG	3 cut(s)	1509, 2608, 2837
EcoT22I	ATGCAT	2 cut(s)	907, 1432
EcoT38I	GRGCYC	3 cut(s)	228, 280, 1652
ErhI	CCWWGG	3 cut(s)	1509, 2608, 2837
Esp3I	CGTCTC	1 cut(s)	2631
FalI	AAGNNNNNCTT	6 cut(s)	1065, 1097, 2187, 2219, 2787, 2819
FaqI	GGGAC	3 cut(s)	1102, 1932, 2536
FauI	CCCGC	3 cut(s)	27, 1127, 2484
FauNDI	CATATG	2 cut(s)	459, 1432
FbaI	TGATCA	2 cut(s)	945, 967
FokI	GGATG	8 cut(s)	112, 723, 1719, 2054, 2179, 2380, 2507, 2801
FriOI	GRGCYC	3 cut(s)	228, 280, 1652
FspBI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 2838
FspI	TGCGCA	1 cut(s)	2957
GlaI	GCGC	1 cut(s)	2957
GsaI	CCCAGC	3 cut(s)	84, 1665, 2868
GsuI	CTGGAG	3 cut(s)	84, 1995, 2499
HaeIII	GGCC	8 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2442
HapII	CCGG	6 cut(s)	46, 374, 708, 2288, 2590, 2682
HgaI	GACGC	1 cut(s)	2648
HhaI	GCGC	1 cut(s)	2958
Hin6I	GCGC	1 cut(s)	2956
HinP1I	GCGC	1 cut(s)	2956
HincII	GTYRAC	4 cut(s)	660, 757, 864, 2851
HindII	GTYRAC	4 cut(s)	660, 757, 864, 2851
HindIII	AAGCTT	1 cut(s)	413
HpaI	GTTAAC	2 cut(s)	660, 2851
HpaII	CCGG	6 cut(s)	46, 374, 708, 2288, 2590, 2682
HphI	GGTGA	8 cut(s)	183, 418, 755, 1245, 1370, 2132, 2527, 2902
Hpy166II	GTNNAC	7 cut(s)	660, 757, 864, 1804, 2122, 2851, 3007
Hpy8I	GTNNAC	7 cut(s)	660, 757, 864, 1804, 2122, 2851, 3007
Hpy99I	CGWCG	4 cut(s)	217, 311, 2056, 2103
HpyCH4III	ACNGT	9 cut(s)	872, 1412, 1714, 1819, 1857, 1954, 2066, 2209, 2752
HpyCH4IV	ACGT	3 cut(s)	1990, 2101, 2275
HpyF10VI	GCNNNNNNNGC	5 cut(s)	110, 176, 1028, 2435, 2439
HpySE526I	ACGT	3 cut(s)	1990, 2101, 2275
HspAI	GCGC	1 cut(s)	2956
Kpn2I	TCCGGA	1 cut(s)	2287
KpnI	GGTACC	2 cut(s)	650, 2386
Ksp22I	TGATCA	2 cut(s)	945, 967
KspAI	GTTAAC	2 cut(s)	660, 2851
LmnI	GCTCC	6 cut(s)	75, 168, 176, 500, 1658, 2684
LweI	GCATC	7 cut(s)	661, 701, 1697, 2078, 2262, 2358, 2394
MabI	ACCWGGT	3 cut(s)	718, 1186, 1222
MaeI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 2838
MaeII	ACGT	3 cut(s)	1990, 2101, 2275
MaeIII	GTNAC	7 cut(s)	391, 1606, 1699, 1714, 2079, 2673, 2857
MbiI	CCGCTC	1 cut(s)	2769
MfeI	CAATTG	2 cut(s)	201, 697
MflI	RGATCY	3 cut(s)	912, 2219, 3021
MhlI	GDGCHC	4 cut(s)	228, 280, 1652, 1806
MlsI	TGGCCA	2 cut(s)	1437, 1508
MluNI	TGGCCA	2 cut(s)	1437, 1508
MlyI	GAGTC	1 cut(s)	1522
MmeI	TCCRAC	2 cut(s)	195, 2950
Mox20I	TGGCCA	2 cut(s)	1437, 1508
Mph1103I	ATGCAT	2 cut(s)	907, 1432
MroI	TCCGGA	1 cut(s)	2287
MroXI	GAANNNNTTC	1 cut(s)	2352
MscI	TGGCCA	2 cut(s)	1437, 1508
MslI	CAYNNNNRTG	3 cut(s)	263, 842, 2129
Msp20I	TGGCCA	2 cut(s)	1437, 1508
MspA1I	CMGCKG	4 cut(s)	590, 2629, 2657, 2864
MspCI	CTTAAG	2 cut(s)	1082, 2530
MspI	CCGG	6 cut(s)	46, 374, 708, 2288, 2590, 2682
MspR9I	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
MunI	CAATTG	2 cut(s)	201, 697
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
MvnI	CGCG	2 cut(s)	113, 1053
MwoI	GCNNNNNNNGC	5 cut(s)	110, 176, 1028, 2435, 2439
NciI	CCSGG	1 cut(s)	374
NdeI	CATATG	2 cut(s)	459, 1432
NlaIV	GGNNCC	6 cut(s)	648, 1281, 1650, 2022, 2384, 2686
NmuCI	GTSAC	2 cut(s)	1714, 2857
NsbI	TGCGCA	1 cut(s)	2957
NsiI	ATGCAT	2 cut(s)	907, 1432
NspI	RCATGY	3 cut(s)	262, 1031, 1870
NspV	TTCGAA	1 cut(s)	2941
PaeI	GCATGC	1 cut(s)	262
PaeR7I	CTCGAG	3 cut(s)	234, 610, 1442
PagI	TCATGA	1 cut(s)	2344
PceI	AGGCCT	1 cut(s)	1080
PcsI	WCGNNNNNNNCGW	1 cut(s)	2107
PctI	GAATGC	1 cut(s)	503
PdmI	GAANNNNTTC	1 cut(s)	2352
PflMI	CCANNNNNTGG	1 cut(s)	138
Ple19I	CGATCG	1 cut(s)	1542
PleI	GAGTC	1 cut(s)	1522
PpsI	GAGTC	1 cut(s)	1522
PshAI	GACNNNNGTC	1 cut(s)	873
PsiI	TTATAA	1 cut(s)	957
Psp6I	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
PspFI	CCCAGC	3 cut(s)	80, 1661, 2864
PspGI	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
PspN4I	GGNNCC	6 cut(s)	648, 1281, 1650, 2022, 2384, 2686
PspOMI	GGGCCC	1 cut(s)	1648
PspPI	GGNCC	4 cut(s)	48, 1648, 1649, 2441
PspXI	VCTCGAGB	1 cut(s)	234
PstI	CTGCAG	1 cut(s)	1021
PstNI	CAGNNNCTG	1 cut(s)	1661
PsuI	RGATCY	3 cut(s)	912, 2219, 3021
PvuI	CGATCG	1 cut(s)	1542
PvuII	CAGCTG	1 cut(s)	2864
RseI	CAYNNNNRTG	3 cut(s)	263, 842, 2129
Sau96I	GGNCC	4 cut(s)	48, 1648, 1649, 2441
ScaI	AGTACT	2 cut(s)	467, 1333
SchI	GAGTC	1 cut(s)	1522
ScrFI	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
SduI	GDGCHC	4 cut(s)	228, 280, 1652, 1806
SexAI	ACCWGGT	3 cut(s)	718, 1186, 1222
SfaNI	GCATC	7 cut(s)	661, 701, 1697, 2078, 2262, 2358, 2394
SfcI	CTRYAG	1 cut(s)	1017
Sfr274I	CTCGAG	3 cut(s)	234, 610, 1442
SfuI	TTCGAA	1 cut(s)	2941
SinI	GGWCC	1 cut(s)	48
SlaI	CTCGAG	3 cut(s)	234, 610, 1442
SmiMI	CAYNNNNRTG	3 cut(s)	263, 842, 2129
SmlI	CTYRAG	7 cut(s)	234, 610, 1082, 1442, 1788, 2394, 2530
SmoI	CTYRAG	7 cut(s)	234, 610, 1082, 1442, 1788, 2394, 2530
SphI	GCATGC	1 cut(s)	262
SseBI	AGGCCT	1 cut(s)	1080
SspI	AATATT	1 cut(s)	1369
SspMI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 2838
StuI	AGGCCT	1 cut(s)	1080
StyD4I	CCNGG	8 cut(s)	372, 718, 1186, 1222, 1624, 1887, 2553, 2578
StyI	CCWWGG	3 cut(s)	1509, 2608, 2837
TaaI	ACNGT	9 cut(s)	872, 1412, 1714, 1819, 1857, 1954, 2066, 2209, 2752
TaiI	ACGT	3 cut(s)	1993, 2104, 2278
TaqII	GACCGA	1 cut(s)	2583
TatI	WGTACW	4 cut(s)	465, 581, 1331, 2595
TauI	GCSGC	4 cut(s)	8, 113, 2632, 2772
TscAI	CASTG	8 cut(s)	640, 796, 936, 1522, 1717, 1935, 2071, 2394
TseFI	GTSAC	2 cut(s)	1714, 2857
Tsp45I	GTSAC	2 cut(s)	1714, 2857
TspGWI	ACGGA	2 cut(s)	1821, 1930
TspRI	CASTG	8 cut(s)	640, 796, 936, 1522, 1717, 1935, 2071, 2394
Van91I	CCANNNNNTGG	1 cut(s)	138
Vha464I	CTTAAG	2 cut(s)	1082, 2530
VneI	GTGCAC	1 cut(s)	1802
VpaK11BI	GGWCC	1 cut(s)	48
XagI	CCTNNNNNAGG	1 cut(s)	2161
XapI	RAATTY	7 cut(s)	41, 185, 527, 1150, 1416, 2777, 2963
XbaI	TCTAGA	1 cut(s)	2413
XceI	RCATGY	3 cut(s)	262, 1031, 1870
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2861
XhoI	CTCGAG	3 cut(s)	234, 610, 1442
XmaJI	CCTAGG	2 cut(s)	2608, 2837
XmnI	GAANNNNTTC	1 cut(s)	2352
XspI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 2838
ZrmI	AGTACT	2 cut(s)	467, 1333
Zsp2I	ATGCAT	2 cut(s)	907, 1432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.