V-type proton ATPase subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0478911 |
| rosa_laevigata | RLG00000026511 |
| rosa_multiflora | Rmu_sc0000389.1_g000007 Rmu_sc0000928.1_g000027 Rmu_sc0002095.1_g000017 Rmu_sc0002638.1_g000012 Rmu_sc0002758.1_g000004 Rmu_sc0009858.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00073970 |
| rosa_rugosa | Rorug04G0136700 Rorug04G0136700 Rorug04G0136800 |
| rosa_samantha | Rh1AG191900 Rh1CG176800 Rh2BG338400 Rh2CG545100 Rh3BG252700 Rh6AG125800 Rh7AG444700 Rh7CG089300 |
| rosa_wichuraiana | Rw1G012980 Rw1G015750 Rw4G030500 Rw5G014980 Rw7G032850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 148 |
| AfaI | GTAC | 1 cut(s) | 103 |
| AgsI | TTSAA | 1 cut(s) | 190 |
| AjnI | CCWGG | 1 cut(s) | 104 |
| AluBI | AGCT | 2 cut(s) | 39, 75 |
| AluI | AGCT | 2 cut(s) | 39, 75 |
| Ama87I | CYCGRG | 1 cut(s) | 199 |
| AoxI | GGCC | 2 cut(s) | 107, 195 |
| ApoI | RAATTY | 1 cut(s) | 148 |
| AvaI | CYCGRG | 1 cut(s) | 199 |
| BccI | CCATC | 1 cut(s) | 128 |
| BciT130I | CCWGG | 1 cut(s) | 106 |
| BfaI | CTAG | 1 cut(s) | 211 |
| Bme1390I | CCNGG | 1 cut(s) | 106 |
| BmeT110I | CYCGRG | 1 cut(s) | 199 |
| BmrFI | CCNGG | 1 cut(s) | 106 |
| BsaJI | CCNNGG | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 106 |
| BseDI | CCNNGG | 1 cut(s) | 198 |
| BseMII | CTCAG | 1 cut(s) | 5 |
| BshFI | GGCC | 2 cut(s) | 109, 197 |
| BsiHKCI | CYCGRG | 1 cut(s) | 199 |
| BsnI | GGCC | 2 cut(s) | 109, 197 |
| BsoBI | CYCGRG | 1 cut(s) | 199 |
| Bsp143I | GATC | 1 cut(s) | 17 |
| BspANI | GGCC | 2 cut(s) | 109, 197 |
| BspCNI | CTCAG | 1 cut(s) | 6 |
| BssECI | CCNNGG | 1 cut(s) | 198 |
| BssMI | GATC | 1 cut(s) | 17 |
| Bst2UI | CCWGG | 1 cut(s) | 106 |
| Bst4CI | ACNGT | 1 cut(s) | 127 |
| Bst6I | CTCTTC | 1 cut(s) | 41 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstKTI | GATC | 1 cut(s) | 20 |
| BstMBI | GATC | 1 cut(s) | 17 |
| BstNI | CCWGG | 1 cut(s) | 106 |
| BstSCI | CCNGG | 1 cut(s) | 104 |
| BsuRI | GGCC | 2 cut(s) | 109, 197 |
| Csp6I | GTAC | 1 cut(s) | 102 |
| CviJI | RGCY | 6 cut(s) | 11, 39, 75, 109, 143, 197 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 39, 75, 109, 143, 197 |
| CviQI | GTAC | 1 cut(s) | 102 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 1 cut(s) | 19 |
| DpnII | GATC | 1 cut(s) | 17 |
| Eam1104I | CTCTTC | 1 cut(s) | 41 |
| EarI | CTCTTC | 1 cut(s) | 41 |
| Eco147I | AGGCCT | 1 cut(s) | 197 |
| Eco88I | CYCGRG | 1 cut(s) | 199 |
| EcoRII | CCWGG | 1 cut(s) | 104 |
| FaiI | YATR | 2 cut(s) | 78, 80 |
| FspBI | CTAG | 1 cut(s) | 211 |
| HaeIII | GGCC | 2 cut(s) | 109, 197 |
| HinfI | GANTC | 1 cut(s) | 25 |
| Hpy166II | GTNNAC | 1 cut(s) | 60 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 2 cut(s) | 179, 201 |
| Hpy8I | GTNNAC | 1 cut(s) | 60 |
| HpyAV | CCTTC | 2 cut(s) | 113, 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 1 cut(s) | 131 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Kzo9I | GATC | 1 cut(s) | 17 |
| LpnPI | CCDG | 3 cut(s) | 26, 91, 118 |
| MaeI | CTAG | 1 cut(s) | 211 |
| MalI | GATC | 1 cut(s) | 19 |
| MboI | GATC | 1 cut(s) | 17 |
| MboII | GAAGA | 2 cut(s) | 58, 202 |
| MluCI | AATT | 2 cut(s) | 52, 148 |
| MlyI | GAGTC | 1 cut(s) | 34 |
| MmeI | TCCRAC | 1 cut(s) | 23 |
| MnlI | CCTC | 2 cut(s) | 154, 208 |
| MseI | TTAA | 1 cut(s) | 92 |
| MspR9I | CCNGG | 1 cut(s) | 106 |
| MvaI | CCWGG | 1 cut(s) | 106 |
| NdeII | GATC | 1 cut(s) | 17 |
| PceI | AGGCCT | 1 cut(s) | 197 |
| PleI | GAGTC | 1 cut(s) | 33 |
| PpsI | GAGTC | 1 cut(s) | 33 |
| Psp6I | CCWGG | 1 cut(s) | 104 |
| PspGI | CCWGG | 1 cut(s) | 104 |
| RsaI | GTAC | 1 cut(s) | 103 |
| RsaNI | GTAC | 1 cut(s) | 102 |
| SaqAI | TTAA | 1 cut(s) | 92 |
| Sau3AI | GATC | 1 cut(s) | 17 |
| SchI | GAGTC | 1 cut(s) | 34 |
| ScrFI | CCNGG | 1 cut(s) | 106 |
| SetI | ASST | 2 cut(s) | 41, 77 |
| SgeI | CNNG | 8 cut(s) | 25, 36, 77, 98, 117, 118, 128, 191 |
| Sse9I | AATT | 2 cut(s) | 52, 148 |
| SseBI | AGGCCT | 1 cut(s) | 197 |
| SspMI | CTAG | 1 cut(s) | 211 |
| StuI | AGGCCT | 1 cut(s) | 197 |
| StyD4I | CCNGG | 1 cut(s) | 104 |
| TaaI | ACNGT | 1 cut(s) | 127 |
| TaqI | TCGA | 2 cut(s) | 23, 117 |
| TasI | AATT | 2 cut(s) | 52, 148 |
| Tru1I | TTAA | 1 cut(s) | 92 |
| Tru9I | TTAA | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 148 |
| XspI | CTAG | 1 cut(s) | 211 |