Rh7CG089300
NAC Family

Nascent polypeptide-associated complex subunit alpha-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007551
Physical Location & Seq
Forward (+)
6732613 .. 6746441
13829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG089300.1

Sequence Viewer

Length: 453 bp
ATGCTGAAGCTGGGTATGAAGAAAGACGTCACTGGTGTTAGCAGGGTCACCATCAAGAGAACCAAAAACATTCTGTTTTTCATCTCGAAACCTGATGTGTTCAAAAAAGAAATGCATATGTTTTGTGAAGGAATTGTGATCAAGTTCATGTTGTTTCTACTTGCAATCAACATATGCTGCGAGTCACCGGTCGGAGACGAAGTAATCTTTATAGAGTTTAAGAAGCTCGAGTTTGTGGGTGGGTTGAAGAACTGTGAATTTTTGGAGAAAGTCAAGTCCAGCTTGGGTTATTTCCTGGAGGCCTACCGCCTAGTGAGGAAGGGTGATCGATCTCTTCATTGTGAGAGTTGGAATGAGGAGTGTCGAGTTCAAGCTCCAGACATTGAAATATTTCCAATAGGGTTTACTAAAGTGGCAACAGATAAGAATTCTAAAGCTGGATCAAATGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAC

Protein Analysis

150

Amino Acids

17.14

Weight (kDa)

8.88

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAC PF01849 1 - 35 5.8e-08 NAC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 30
AciI CCGC 1 cut(s) 307
AclWI GGATC 1 cut(s) 448
AcsI RAATTY 2 cut(s) 257, 427
AcuI CTGAAG 1 cut(s) 26
AcyI GRCGYC 1 cut(s) 27
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 4 cut(s) 103, 247, 371, 386
AjnI CCWGG 1 cut(s) 294
AluBI AGCT 5 cut(s) 10, 226, 282, 374, 437
AluI AGCT 5 cut(s) 10, 226, 282, 374, 437
Alw26I GTCTC 1 cut(s) 189
AlwI GGATC 1 cut(s) 448
Ama87I CYCGRG 1 cut(s) 227
AoxI GGCC 1 cut(s) 300
ApeKI GCWGC 1 cut(s) 177
ApoI RAATTY 2 cut(s) 257, 427
AsiGI ACCGGT 1 cut(s) 187
Asp700I GAANNNNTTC 1 cut(s) 390
AsuHPI GGTGA 3 cut(s) 40, 177, 335
AvaI CYCGRG 1 cut(s) 227
BbvI GCAGC 1 cut(s) 164
BccI CCATC 1 cut(s) 59
BciT130I CCWGG 1 cut(s) 296
BclI TGATCA 1 cut(s) 138
BcoDI GTCTC 1 cut(s) 189
BfaI CTAG 2 cut(s) 311, 451
BisI GCNGC 1 cut(s) 178
BlsI GCNGC 1 cut(s) 179
Bme1390I CCNGG 1 cut(s) 296
BmeT110I CYCGRG 1 cut(s) 227
BmrFI CCNGG 1 cut(s) 296
BpmI CTGGAG 2 cut(s) 317, 360
Bsa29I ATCGAT 1 cut(s) 328
BsaHI GRCGYC 1 cut(s) 27
BsaWI WCCGGW 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 1 cut(s) 37
BseBI CCWGG 1 cut(s) 296
BseCI ATCGAT 1 cut(s) 328
BseNI ACTGG 1 cut(s) 37
BseRI GAGGAG 1 cut(s) 371
BseXI GCAGC 1 cut(s) 164
BseYI CCCAGC 1 cut(s) 10
Bsh1285I CGRYCG 1 cut(s) 192
BshFI GGCC 1 cut(s) 302
BshTI ACCGGT 1 cut(s) 187
BshVI ATCGAT 1 cut(s) 328
BsiEI CGRYCG 1 cut(s) 192
BsiHKCI CYCGRG 1 cut(s) 227
BsiSI CCGG 1 cut(s) 188
BsmAI GTCTC 1 cut(s) 189
BsmBI CGTCTC 1 cut(s) 189
BsnI GGCC 1 cut(s) 302
BsoBI CYCGRG 1 cut(s) 227
Bsp143I GATC 4 cut(s) 138, 325, 329, 440
BspACI CCGC 1 cut(s) 307
BspANI GGCC 1 cut(s) 302
BspDI ATCGAT 1 cut(s) 328
BspPI GGATC 1 cut(s) 448
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 1 cut(s) 37
BssAI RCCGGY 1 cut(s) 187
BssMI GATC 4 cut(s) 138, 325, 329, 440
BssNI GRCGYC 1 cut(s) 27
Bst2UI CCWGG 1 cut(s) 296
Bst4CI ACNGT 1 cut(s) 254
Bst6I CTCTTC 1 cut(s) 339
BstACI GRCGYC 1 cut(s) 27
BstEII GGTNACC 1 cut(s) 46
BstKTI GATC 4 cut(s) 141, 328, 332, 443
BstMAI GTCTC 1 cut(s) 189
BstMBI GATC 4 cut(s) 138, 325, 329, 440
BstMCI CGRYCG 1 cut(s) 192
BstNI CCWGG 1 cut(s) 296
BstPI GGTNACC 1 cut(s) 46
BstSCI CCNGG 1 cut(s) 294
BstV1I GCAGC 1 cut(s) 164
Bsu15I ATCGAT 1 cut(s) 328
BsuRI GGCC 1 cut(s) 302
BsuTUI ATCGAT 1 cut(s) 328
BtsIMutI CAGTG 1 cut(s) 30
Cfr10I RCCGGY 1 cut(s) 187
ClaI ATCGAT 1 cut(s) 328
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 1 cut(s) 148
CviJI RGCY 6 cut(s) 10, 226, 282, 302, 374, 437
CviKI_1 RGCY 6 cut(s) 10, 226, 282, 302, 374, 437
DpnI GATC 4 cut(s) 140, 327, 331, 442
DpnII GATC 4 cut(s) 138, 325, 329, 440
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
Eco147I AGGCCT 1 cut(s) 302
Eco57I CTGAAG 1 cut(s) 26
Eco88I CYCGRG 1 cut(s) 227
Eco91I GGTNACC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 46
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 1 cut(s) 294
EcoT22I ATGCAT 1 cut(s) 117
Esp3I CGTCTC 1 cut(s) 189
FaeI CATG 1 cut(s) 151
FaiI YATR 7 cut(s) 17, 117, 119, 149, 173, 175, 212
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FatI CATG 1 cut(s) 147
FauNDI CATATG 2 cut(s) 117, 173
FbaI TGATCA 1 cut(s) 138
Fnu4HI GCNGC 1 cut(s) 178
Fsp4HI GCNGC 1 cut(s) 178
FspBI CTAG 2 cut(s) 311, 451
GluI GCNGC 1 cut(s) 178
GsaI CCCAGC 1 cut(s) 14
GsuI CTGGAG 2 cut(s) 317, 360
HaeIII GGCC 1 cut(s) 302
HapII CCGG 1 cut(s) 188
Hin1I GRCGYC 1 cut(s) 27
Hin1II CATG 1 cut(s) 151
HinfI GANTC 1 cut(s) 182
HpaII CCGG 1 cut(s) 188
HphI GGTGA 3 cut(s) 40, 177, 335
Hpy166II GTNNAC 1 cut(s) 405
Hpy188I TCNGA 1 cut(s) 194
Hpy188III TCNNGA 3 cut(s) 55, 85, 377
Hpy8I GTNNAC 1 cut(s) 405
HpyAV CCTTC 2 cut(s) 122, 313
HpyCH4III ACNGT 1 cut(s) 254
HpyCH4IV ACGT 1 cut(s) 27
HpyCH4V TGCA 2 cut(s) 115, 164
HpySE526I ACGT 1 cut(s) 27
Hsp92I GRCGYC 1 cut(s) 27
Hsp92II CATG 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 138
Kzo9I GATC 4 cut(s) 138, 325, 329, 440
LmnI GCTCC 1 cut(s) 379
LpnPI CCDG 9 cut(s) 18, 28, 105, 201, 281, 292, 308, 390, 423
Lsp1109I GCAGC 1 cut(s) 164
MaeI CTAG 2 cut(s) 311, 451
MaeII ACGT 1 cut(s) 27
MaeIII GTNAC 3 cut(s) 28, 46, 183
MalI GATC 4 cut(s) 140, 327, 331, 442
MboI GATC 4 cut(s) 138, 325, 329, 440
MboII GAAGA 3 cut(s) 31, 259, 326
MluCI AATT 3 cut(s) 132, 257, 427
MlyI GAGTC 1 cut(s) 191
MmeI TCCRAC 2 cut(s) 172, 329
MnlI CCTC 3 cut(s) 292, 309, 349
Mph1103I ATGCAT 1 cut(s) 117
MroXI GAANNNNTTC 1 cut(s) 390
MseI TTAA 1 cut(s) 219
MspI CCGG 1 cut(s) 188
MspR9I CCNGG 1 cut(s) 296
MvaI CCWGG 1 cut(s) 296
NdeI CATATG 2 cut(s) 117, 173
NdeII GATC 4 cut(s) 138, 325, 329, 440
NlaIII CATG 1 cut(s) 151
NmuCI GTSAC 3 cut(s) 28, 46, 183
NsiI ATGCAT 1 cut(s) 117
PaeR7I CTCGAG 1 cut(s) 227
PceI AGGCCT 1 cut(s) 302
PdmI GAANNNNTTC 1 cut(s) 390
PfoI TCCNGGA 1 cut(s) 294
PinAI ACCGGT 1 cut(s) 187
PkrI GCNGC 1 cut(s) 179
PleI GAGTC 1 cut(s) 190
PpsI GAGTC 1 cut(s) 190
Psp6I CCWGG 1 cut(s) 294
PspEI GGTNACC 1 cut(s) 46
PspFI CCCAGC 1 cut(s) 10
PspGI CCWGG 1 cut(s) 294
PspXI VCTCGAGB 1 cut(s) 227
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 1 cut(s) 178
Sau3AI GATC 4 cut(s) 138, 325, 329, 440
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 1 cut(s) 296
SetI ASST 7 cut(s) 12, 30, 94, 228, 284, 376, 439
Sfr274I CTCGAG 1 cut(s) 227
SlaI CTCGAG 1 cut(s) 227
SmlI CTYRAG 1 cut(s) 227
SmoI CTYRAG 1 cut(s) 227
Sse9I AATT 3 cut(s) 132, 257, 427
SseBI AGGCCT 1 cut(s) 302
SsiI CCGC 1 cut(s) 307
SspI AATATT 1 cut(s) 390
SspMI CTAG 2 cut(s) 311, 451
StuI AGGCCT 1 cut(s) 302
StyD4I CCNGG 1 cut(s) 294
TaaI ACNGT 1 cut(s) 254
TaiI ACGT 1 cut(s) 30
TaqI TCGA 4 cut(s) 86, 228, 328, 364
TasI AATT 3 cut(s) 132, 257, 427
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TscAI CASTG 1 cut(s) 37
TseFI GTSAC 3 cut(s) 28, 46, 183
TseI GCWGC 1 cut(s) 177
Tsp45I GTSAC 3 cut(s) 28, 46, 183
TspDTI ATGAA 4 cut(s) 32, 70, 136, 326
TspRI CASTG 1 cut(s) 37
XapI RAATTY 2 cut(s) 257, 427
XhoI CTCGAG 1 cut(s) 227
XmnI GAANNNNTTC 1 cut(s) 390
XspI CTAG 2 cut(s) 311, 451
ZraI GACGTC 1 cut(s) 28
Zsp2I ATGCAT 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.