V-type proton ATPase subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0478911 |
| rosa_laevigata | RLG00000026511 |
| rosa_multiflora | Rmu_sc0000389.1_g000007 Rmu_sc0000928.1_g000027 Rmu_sc0002095.1_g000017 Rmu_sc0002638.1_g000012 Rmu_sc0002758.1_g000004 Rmu_sc0009858.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00073970 |
| rosa_rugosa | Rorug04G0136700 Rorug04G0136700 Rorug04G0136800 |
| rosa_samantha | Rh1AG191900 Rh1CG176800 Rh2BG338400 Rh2CG545100 Rh3BG252700 Rh6AG125800 Rh7AG444700 Rh7CG089300 |
| rosa_wichuraiana | Rw1G012980 Rw1G015750 Rw4G030500 Rw5G014980 Rw7G032850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 223 |
| AclWI | GGATC | 1 cut(s) | 8 |
| AcsI | RAATTY | 1 cut(s) | 211 |
| AfaI | GTAC | 1 cut(s) | 166 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 105 |
| AgsI | TTSAA | 2 cut(s) | 73, 253 |
| AjnI | CCWGG | 1 cut(s) | 167 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 274, 306 |
| AluBI | AGCT | 1 cut(s) | 138 |
| AluI | AGCT | 1 cut(s) | 138 |
| AlwI | GGATC | 1 cut(s) | 8 |
| AoxI | GGCC | 2 cut(s) | 170, 258 |
| ApoI | RAATTY | 1 cut(s) | 211 |
| AxyI | CCTNAGG | 1 cut(s) | 262 |
| BccI | CCATC | 1 cut(s) | 191 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 14, 48 |
| BciT130I | CCWGG | 1 cut(s) | 169 |
| Bme1390I | CCNGG | 1 cut(s) | 169 |
| BmrFI | CCNGG | 1 cut(s) | 169 |
| BsaBI | GATNNNNATC | 1 cut(s) | 375 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 105 |
| Bse1I | ACTGG | 1 cut(s) | 56 |
| Bse21I | CCTNAGG | 1 cut(s) | 262 |
| Bse3DI | GCAATG | 1 cut(s) | 36 |
| Bse8I | GATNNNNATC | 1 cut(s) | 375 |
| BseBI | CCWGG | 1 cut(s) | 169 |
| BseJI | GATNNNNATC | 1 cut(s) | 375 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 105 |
| BseMI | GCAATG | 1 cut(s) | 36 |
| BseNI | ACTGG | 1 cut(s) | 56 |
| BshFI | GGCC | 2 cut(s) | 172, 260 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 105 |
| BsnI | GGCC | 2 cut(s) | 172, 260 |
| Bsp143I | GATC | 2 cut(s) | 13, 376 |
| BspANI | GGCC | 2 cut(s) | 172, 260 |
| BspPI | GGATC | 1 cut(s) | 8 |
| BsrDI | GCAATG | 1 cut(s) | 36 |
| BsrI | ACTGG | 1 cut(s) | 56 |
| BssMI | GATC | 2 cut(s) | 13, 376 |
| Bst2UI | CCWGG | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 1 cut(s) | 190 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstDEI | CTNAG | 1 cut(s) | 262 |
| BstKTI | GATC | 2 cut(s) | 16, 379 |
| BstMBI | GATC | 2 cut(s) | 13, 376 |
| BstNI | CCWGG | 1 cut(s) | 169 |
| BstSCI | CCNGG | 1 cut(s) | 167 |
| Bsu36I | CCTNAGG | 1 cut(s) | 262 |
| BsuRI | GGCC | 2 cut(s) | 172, 260 |
| Csp6I | GTAC | 1 cut(s) | 165 |
| CviAII | CATG | 2 cut(s) | 32, 49 |
| CviJI | RGCY | 7 cut(s) | 30, 55, 138, 172, 206, 260, 338 |
| CviKI_1 | RGCY | 7 cut(s) | 30, 55, 138, 172, 206, 260, 338 |
| CviQI | GTAC | 1 cut(s) | 165 |
| DdeI | CTNAG | 1 cut(s) | 262 |
| DpnI | GATC | 2 cut(s) | 15, 378 |
| DpnII | GATC | 2 cut(s) | 13, 376 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| Eco147I | AGGCCT | 1 cut(s) | 260 |
| Eco32I | GATATC | 1 cut(s) | 322 |
| Eco81I | CCTNAGG | 1 cut(s) | 262 |
| EcoRII | CCWGG | 1 cut(s) | 167 |
| EcoRV | GATATC | 1 cut(s) | 322 |
| FaeI | CATG | 2 cut(s) | 35, 52 |
| FaiI | YATR | 4 cut(s) | 33, 50, 141, 143 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 245, 277 |
| FatI | CATG | 2 cut(s) | 31, 48 |
| FblI | GTMKAC | 1 cut(s) | 223 |
| HaeIII | GGCC | 2 cut(s) | 172, 260 |
| Hin1II | CATG | 2 cut(s) | 35, 52 |
| Hpy166II | GTNNAC | 2 cut(s) | 123, 224 |
| Hpy188I | TCNGA | 1 cut(s) | 217 |
| Hpy188III | TCNNGA | 3 cut(s) | 11, 242, 307 |
| Hpy8I | GTNNAC | 2 cut(s) | 123, 224 |
| HpyAV | CCTTC | 2 cut(s) | 176, 250 |
| HpyCH4III | ACNGT | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 1 cut(s) | 194 |
| HpyF3I | CTNAG | 1 cut(s) | 262 |
| Hsp92II | CATG | 2 cut(s) | 35, 52 |
| Kzo9I | GATC | 2 cut(s) | 13, 376 |
| LpnPI | CCDG | 9 cut(s) | 24, 56, 69, 112, 154, 181, 259, 292, 312 |
| MalI | GATC | 2 cut(s) | 15, 378 |
| MboI | GATC | 2 cut(s) | 13, 376 |
| MboII | GAAGA | 4 cut(s) | 121, 265, 322, 366 |
| MluCI | AATT | 3 cut(s) | 68, 115, 211 |
| MmeI | TCCRAC | 1 cut(s) | 86 |
| MnlI | CCTC | 4 cut(s) | 106, 217, 289, 324 |
| MseI | TTAA | 1 cut(s) | 155 |
| MspR9I | CCNGG | 1 cut(s) | 169 |
| MvaI | CCWGG | 1 cut(s) | 169 |
| NdeII | GATC | 2 cut(s) | 13, 376 |
| NlaIII | CATG | 2 cut(s) | 35, 52 |
| PceI | AGGCCT | 1 cut(s) | 260 |
| Psp6I | CCWGG | 1 cut(s) | 167 |
| PspGI | CCWGG | 1 cut(s) | 167 |
| RsaI | GTAC | 1 cut(s) | 166 |
| RsaNI | GTAC | 1 cut(s) | 165 |
| SaqAI | TTAA | 1 cut(s) | 155 |
| Sau3AI | GATC | 2 cut(s) | 13, 376 |
| ScrFI | CCNGG | 1 cut(s) | 169 |
| SetI | ASST | 3 cut(s) | 98, 140, 335 |
| Sse9I | AATT | 3 cut(s) | 68, 115, 211 |
| SseBI | AGGCCT | 1 cut(s) | 260 |
| StuI | AGGCCT | 1 cut(s) | 260 |
| StyD4I | CCNGG | 1 cut(s) | 167 |
| TaaI | ACNGT | 1 cut(s) | 190 |
| TaqI | TCGA | 2 cut(s) | 180, 379 |
| TasI | AATT | 3 cut(s) | 68, 115, 211 |
| Tru1I | TTAA | 1 cut(s) | 155 |
| Tru9I | TTAA | 1 cut(s) | 155 |
| TspDTI | ATGAA | 1 cut(s) | 65 |
| XapI | RAATTY | 1 cut(s) | 211 |
| XmiI | GTMKAC | 1 cut(s) | 223 |