DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0490961 |
| rosa_laevigata | RLG00000003376 RLG00000009552 RLG00000030034 RLG00000030420 |
| rosa_roxburghii | Rroxscaffold_3G00221510 Rroxscaffold_5G00337500 |
| rosa_rugosa | Rorug01G0065900 Rorug04G0009000 Rorug05G0079800 |
| rosa_samantha | Rh2DG569000 Rh3AG337800 Rh3DG302200 Rh5CG578600 Rh6AG091900 Rh6CG079600 Rh6CG206700 Rh6DG075100 Rh7BG186300 Rh7BG186400 |
| rosa_wichuraiana | Rw4G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 148 |
| AcyI | GRCGYC | 1 cut(s) | 131 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 119 |
| AgsI | TTSAA | 1 cut(s) | 80 |
| AluBI | AGCT | 1 cut(s) | 27 |
| AluI | AGCT | 1 cut(s) | 27 |
| Alw21I | GWGCWC | 1 cut(s) | 58 |
| ApoI | RAATTY | 1 cut(s) | 148 |
| AspS9I | GGNCC | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 1 cut(s) | 203 |
| AvaII | GGWCC | 1 cut(s) | 110 |
| Bbv12I | GWGCWC | 1 cut(s) | 58 |
| BccI | CCATC | 3 cut(s) | 101, 113, 194 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 26, 60 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BfaI | CTAG | 1 cut(s) | 156 |
| Bme18I | GGWCC | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 1 cut(s) | 110 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BmsI | GCATC | 1 cut(s) | 34 |
| BsaHI | GRCGYC | 1 cut(s) | 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 119 |
| Bse3DI | GCAATG | 1 cut(s) | 183 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BseMI | GCAATG | 1 cut(s) | 183 |
| BsiHKAI | GWGCWC | 1 cut(s) | 58 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 119 |
| Bsp1286I | GDGCHC | 1 cut(s) | 58 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BsrDI | GCAATG | 1 cut(s) | 183 |
| BssMI | GATC | 1 cut(s) | 193 |
| BssNI | GRCGYC | 1 cut(s) | 131 |
| BstACI | GRCGYC | 1 cut(s) | 131 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 53 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 33, 53 |
| Cfr13I | GGNCC | 1 cut(s) | 110 |
| CseI | GACGC | 1 cut(s) | 120 |
| CviJI | RGCY | 2 cut(s) | 27, 207 |
| CviKI_1 | RGCY | 2 cut(s) | 27, 207 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| Eco47I | GGWCC | 1 cut(s) | 110 |
| FaiI | YATR | 3 cut(s) | 74, 143, 185 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 119, 151 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FspBI | CTAG | 1 cut(s) | 156 |
| HgaI | GACGC | 1 cut(s) | 120 |
| Hin1I | GRCGYC | 1 cut(s) | 131 |
| HinfI | GANTC | 2 cut(s) | 14, 76 |
| HphI | GGTGA | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 1 cut(s) | 13 |
| Hpy188III | TCNNGA | 4 cut(s) | 20, 59, 156, 197 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 47, 176 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 33, 53 |
| Hsp92I | GRCGYC | 1 cut(s) | 131 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LpnPI | CCDG | 6 cut(s) | 5, 44, 54, 108, 117, 126 |
| LweI | GCATC | 1 cut(s) | 34 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MhlI | GDGCHC | 1 cut(s) | 58 |
| MluCI | AATT | 1 cut(s) | 148 |
| MnlI | CCTC | 2 cut(s) | 82, 197 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 33, 53 |
| NdeII | GATC | 1 cut(s) | 193 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| PfeI | GAWTC | 2 cut(s) | 14, 76 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 1 cut(s) | 110 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 84, 116 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| Sau96I | GGNCC | 1 cut(s) | 110 |
| SduI | GDGCHC | 1 cut(s) | 58 |
| SetI | ASST | 4 cut(s) | 29, 97, 106, 115 |
| SfaNI | GCATC | 1 cut(s) | 34 |
| SgeI | CNNG | 9 cut(s) | 32, 60, 71, 81, 107, 116, 125, 168, 200 |
| SinI | GGWCC | 1 cut(s) | 110 |
| Sse9I | AATT | 1 cut(s) | 148 |
| SspMI | CTAG | 1 cut(s) | 156 |
| TasI | AATT | 1 cut(s) | 148 |
| TfiI | GAWTC | 2 cut(s) | 14, 76 |
| TspDTI | ATGAA | 3 cut(s) | 161, 177, 194 |
| VpaK11BI | GGWCC | 1 cut(s) | 110 |
| XapI | RAATTY | 1 cut(s) | 148 |
| XbaI | TCTAGA | 1 cut(s) | 155 |
| XspI | CTAG | 1 cut(s) | 156 |