DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0490961 |
| rosa_laevigata | RLG00000003376 RLG00000009552 RLG00000030034 RLG00000030420 |
| rosa_roxburghii | Rroxscaffold_3G00221510 Rroxscaffold_5G00337500 |
| rosa_rugosa | Rorug01G0065900 Rorug04G0009000 Rorug05G0079800 |
| rosa_samantha | Rh2DG569000 Rh3AG337800 Rh3DG302200 Rh5CG578600 Rh6AG091900 Rh6CG079600 Rh6CG206700 Rh6DG075100 Rh7BG186300 Rh7BG186400 |
| rosa_wichuraiana | Rw4G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 347 |
| AciI | CCGC | 2 cut(s) | 345, 347 |
| AgsI | TTSAA | 2 cut(s) | 221, 263 |
| AluBI | AGCT | 1 cut(s) | 168 |
| AluI | AGCT | 1 cut(s) | 168 |
| Alw21I | GWGCWC | 1 cut(s) | 199 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 143 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 386 |
| Bbv12I | GWGCWC | 1 cut(s) | 199 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 167, 201 |
| BfaI | CTAG | 2 cut(s) | 200, 210 |
| BmsI | GCATC | 2 cut(s) | 175, 256 |
| BpmI | CTGGAG | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 1 cut(s) | 345 |
| Bse1I | ACTGG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 345 |
| BseMII | CTCAG | 2 cut(s) | 315, 320 |
| BseNI | ACTGG | 1 cut(s) | 93 |
| Bsh1236I | CGCG | 1 cut(s) | 347 |
| BsiHKAI | GWGCWC | 1 cut(s) | 199 |
| Bsp1286I | GDGCHC | 1 cut(s) | 199 |
| BspACI | CCGC | 2 cut(s) | 345, 347 |
| BspCNI | CTCAG | 2 cut(s) | 316, 319 |
| BspFNI | CGCG | 1 cut(s) | 347 |
| BspHI | TCATGA | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 93 |
| BssECI | CCNNGG | 1 cut(s) | 345 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 1 cut(s) | 190 |
| BstDEI | CTNAG | 2 cut(s) | 306, 324 |
| BstDSI | CCRYGG | 1 cut(s) | 345 |
| BstFNI | CGCG | 1 cut(s) | 347 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 174, 194 |
| BstUI | CGCG | 1 cut(s) | 347 |
| BtgI | CCRYGG | 1 cut(s) | 345 |
| BtsI | GCAGTG | 1 cut(s) | 199 |
| BtsIMutI | CAGTG | 1 cut(s) | 199 |
| Cac8I | GCNNGC | 1 cut(s) | 190 |
| CaiI | CAGNNNCTG | 1 cut(s) | 143 |
| CciI | TCATGA | 1 cut(s) | 33 |
| Cfr42I | CCGCGG | 1 cut(s) | 348 |
| CviAII | CATG | 2 cut(s) | 34, 95 |
| CviJI | RGCY | 2 cut(s) | 168, 233 |
| CviKI_1 | RGCY | 2 cut(s) | 168, 233 |
| DdeI | CTNAG | 2 cut(s) | 306, 324 |
| Eco32I | GATATC | 1 cut(s) | 312 |
| EcoRV | GATATC | 1 cut(s) | 312 |
| FaeI | CATG | 2 cut(s) | 37, 98 |
| FaiI | YATR | 6 cut(s) | 29, 35, 42, 96, 126, 215 |
| FatI | CATG | 2 cut(s) | 33, 94 |
| FspBI | CTAG | 2 cut(s) | 200, 210 |
| GsuI | CTGGAG | 1 cut(s) | 110 |
| Hin1II | CATG | 2 cut(s) | 37, 98 |
| HinfI | GANTC | 5 cut(s) | 13, 20, 140, 155, 217 |
| HphI | GGTGA | 2 cut(s) | 77, 386 |
| Hpy188I | TCNGA | 3 cut(s) | 139, 154, 309 |
| Hpy188III | TCNNGA | 4 cut(s) | 17, 34, 161, 200 |
| HpyCH4V | TGCA | 2 cut(s) | 188, 384 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 174, 194 |
| HpyF3I | CTNAG | 2 cut(s) | 306, 324 |
| Hsp92II | CATG | 2 cut(s) | 37, 98 |
| KspI | CCGCGG | 1 cut(s) | 348 |
| LmnI | GCTCC | 2 cut(s) | 91, 274 |
| LpnPI | CCDG | 6 cut(s) | 30, 48, 74, 129, 146, 336 |
| LweI | GCATC | 2 cut(s) | 175, 256 |
| MaeI | CTAG | 2 cut(s) | 200, 210 |
| MaeIII | GTNAC | 1 cut(s) | 110 |
| MboII | GAAGA | 3 cut(s) | 22, 275, 368 |
| MhlI | GDGCHC | 1 cut(s) | 199 |
| MnlI | CCTC | 2 cut(s) | 223, 358 |
| MslI | CAYNNNNRTG | 1 cut(s) | 32 |
| MspA1I | CMGCKG | 1 cut(s) | 347 |
| MvnI | CGCG | 1 cut(s) | 347 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 174, 194 |
| NlaIII | CATG | 2 cut(s) | 37, 98 |
| PagI | TCATGA | 1 cut(s) | 33 |
| PfeI | GAWTC | 5 cut(s) | 13, 20, 140, 155, 217 |
| PstNI | CAGNNNCTG | 1 cut(s) | 143 |
| RseI | CAYNNNNRTG | 1 cut(s) | 32 |
| SacII | CCGCGG | 1 cut(s) | 348 |
| SduI | GDGCHC | 1 cut(s) | 199 |
| SetI | ASST | 2 cut(s) | 170, 325 |
| SfaNI | GCATC | 2 cut(s) | 175, 256 |
| Sfr303I | CCGCGG | 1 cut(s) | 348 |
| SgrBI | CCGCGG | 1 cut(s) | 348 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 32 |
| SsiI | CCGC | 2 cut(s) | 345, 347 |
| SspMI | CTAG | 2 cut(s) | 200, 210 |
| TfiI | GAWTC | 5 cut(s) | 13, 20, 140, 155, 217 |
| TscAI | CASTG | 1 cut(s) | 199 |
| TspDTI | ATGAA | 3 cut(s) | 22, 50, 369 |
| TspRI | CASTG | 1 cut(s) | 199 |
| XbaI | TCTAGA | 1 cut(s) | 199 |
| XspI | CTAG | 2 cut(s) | 200, 210 |