No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0490961 |
| rosa_laevigata | RLG00000003376 RLG00000009552 RLG00000030034 RLG00000030420 |
| rosa_roxburghii | Rroxscaffold_3G00221510 Rroxscaffold_5G00337500 |
| rosa_rugosa | Rorug01G0065900 Rorug04G0009000 Rorug05G0079800 |
| rosa_samantha | Rh2DG569000 Rh3AG337800 Rh3DG302200 Rh5CG578600 Rh6AG091900 Rh6CG079600 Rh6CG206700 Rh6DG075100 Rh7BG186300 Rh7BG186400 |
| rosa_wichuraiana | Rw4G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 123 |
| AcuI | CTGAAG | 1 cut(s) | 185 |
| AgsI | TTSAA | 2 cut(s) | 109, 193 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 163, 195 |
| AluBI | AGCT | 2 cut(s) | 119, 223 |
| AluI | AGCT | 2 cut(s) | 119, 223 |
| ApoI | RAATTY | 1 cut(s) | 123 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 74 |
| AspLEI | GCGC | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 1 cut(s) | 79 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfmI | CTRYAG | 1 cut(s) | 224 |
| BfoI | RGCGCY | 1 cut(s) | 189 |
| BmrI | ACTGGG | 1 cut(s) | 41 |
| BmuI | ACTGGG | 1 cut(s) | 41 |
| Bse1I | ACTGG | 1 cut(s) | 36 |
| BseNI | ACTGG | 1 cut(s) | 36 |
| BslFI | GGGAC | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 50 |
| BsrI | ACTGG | 1 cut(s) | 36 |
| Bst4CI | ACNGT | 1 cut(s) | 9 |
| Bst6I | CTCTTC | 2 cut(s) | 161, 166 |
| BstC8I | GCNNGC | 1 cut(s) | 241 |
| BstH2I | RGCGCY | 1 cut(s) | 189 |
| BstHHI | GCGC | 1 cut(s) | 188 |
| BstSFI | CTRYAG | 1 cut(s) | 224 |
| BtgZI | GCGATG | 1 cut(s) | 220 |
| Cac8I | GCNNGC | 1 cut(s) | 241 |
| CfoI | GCGC | 1 cut(s) | 188 |
| CviAII | CATG | 1 cut(s) | 244 |
| CviJI | RGCY | 2 cut(s) | 119, 223 |
| CviKI_1 | RGCY | 2 cut(s) | 119, 223 |
| Eam1104I | CTCTTC | 2 cut(s) | 161, 166 |
| EarI | CTCTTC | 2 cut(s) | 161, 166 |
| Eco57I | CTGAAG | 1 cut(s) | 185 |
| FaeI | CATG | 1 cut(s) | 247 |
| FaiI | YATR | 4 cut(s) | 12, 204, 206, 245 |
| FaqI | GGGAC | 1 cut(s) | 50 |
| FatI | CATG | 1 cut(s) | 243 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GlaI | GCGC | 1 cut(s) | 187 |
| HaeII | RGCGCY | 1 cut(s) | 189 |
| HhaI | GCGC | 1 cut(s) | 188 |
| Hin1II | CATG | 1 cut(s) | 247 |
| Hin6I | GCGC | 1 cut(s) | 186 |
| HinP1I | GCGC | 1 cut(s) | 186 |
| HinfI | GANTC | 1 cut(s) | 70 |
| HphI | GGTGA | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 165 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 109 |
| Hpy99I | CGWCG | 1 cut(s) | 221 |
| HpyCH4III | ACNGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 1 cut(s) | 247 |
| HspAI | GCGC | 1 cut(s) | 186 |
| LmnI | GCTCC | 1 cut(s) | 183 |
| LpnPI | CCDG | 4 cut(s) | 17, 96, 253, 269 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 85 |
| MboII | GAAGA | 2 cut(s) | 178, 183 |
| MluCI | AATT | 3 cut(s) | 123, 207, 259 |
| MmeI | TCCRAC | 1 cut(s) | 161 |
| MnlI | CCTC | 4 cut(s) | 58, 89, 146, 167 |
| MroXI | GAANNNNTTC | 1 cut(s) | 74 |
| MseI | TTAA | 1 cut(s) | 277 |
| NlaIII | CATG | 1 cut(s) | 247 |
| PdmI | GAANNNNTTC | 1 cut(s) | 74 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| SaqAI | TTAA | 1 cut(s) | 277 |
| SetI | ASST | 3 cut(s) | 69, 121, 225 |
| SfcI | CTRYAG | 1 cut(s) | 224 |
| Sse9I | AATT | 3 cut(s) | 123, 207, 259 |
| SspI | AATATT | 1 cut(s) | 27 |
| SspMI | CTAG | 1 cut(s) | 50 |
| TaaI | ACNGT | 1 cut(s) | 9 |
| TaqI | TCGA | 1 cut(s) | 219 |
| TasI | AATT | 3 cut(s) | 123, 207, 259 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| Tru1I | TTAA | 1 cut(s) | 277 |
| Tru9I | TTAA | 1 cut(s) | 277 |
| TspDTI | ATGAA | 2 cut(s) | 17, 223 |
| XapI | RAATTY | 1 cut(s) | 123 |
| XmnI | GAANNNNTTC | 1 cut(s) | 74 |
| XspI | CTAG | 1 cut(s) | 50 |