Rorug04G0009000

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0010622
Physical Location & Seq
Reverse (-)
1444484 .. 1445353
870 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0009000.1

Sequence Viewer

Length: 870 bp
ATGGCTCACCCGGTGGAGAGTGATCTTTCTCTGGCGGACACGGCGCGAGTTTCTTTGGGTTCGACGGGGCTTGCGGCTTTGCAGGCTGACCGGTGGTATCTGGTGGGTCGCCTGCTTGGCCCGAAGAGTAAGTTCCCGGGTTTCATAGGGACTATAGCTACGATATGGCGTATCAAATCTGGATTGACGATCCATGAAGTGGGAGAGCGATTTGTGTTTCAATTTGAGCGTGAGGCTGAAAGAAACAAGATCCTACATGGAGGACCTTGGTTTTATAGAAATACGATGGTGGTGCTAGGAGGTTATGACGGTATCGGTCCGGTGCACGAGGTTCCACTGCATCTGGTGGAAGCATGGGTTGCAGTTAAGGGCCTTCCGGTGGGTCTTCCAAATAAGGCTGCGCTGAACTTGGTGGGATCAGCCCTGGGGCGTGTGATCCGGTTCGACCAGAATGCCCTATATCAGAAGGAAGCAGAGCAAAGGATTCGATTGGTTTTTGATGTTCGACGGCGACTTAGGGTTTGGATGCTTTTCGAGCGTTCACCGACGGTAGTGCCTGAACTGTCGTTTAACTTTGAAAAGGTCAGAGGTTTCTGTAGGAGCTGTGGCTTTTTTATGCATGGTGAGACAGGATGTGATGACTGGTTGACTAAGGAGAGAGATGAGATCTTGGCTCAGATCCAAGCCACGGCTATGGCTGGACTATCATTAACTGCAGGGGAACGTGGGCCTCGGATTGAGGGAGAGGAGATGCAAGTTCAGAGGGTGATGGTGATTGCGTCGGAACTGGTGGTAGAGGGGCCGGTGTTAGTGGGGACTGATCCACCACATCATTCCTCACTGGCTAGTAATTTTCAGCTTTTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

289

Amino Acids

32.18

Weight (kDa)

7.11

Isoelectric Point (pI)

37.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 31 - 99 5.7e-12 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 166 - 213 3.3e-06 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 199
AccII CGCG 1 cut(s) 46
AciI CCGC 2 cut(s) 35, 74
AclWI GGATC 6 cut(s) 184, 244, 424, 430, 673, 815
AdeI CACNNNGTG 1 cut(s) 13
AfiI CCNNNNNNNGG 3 cut(s) 199, 379, 688
AgeI ACCGGT 1 cut(s) 90
AgsI TTSAA 2 cut(s) 221, 578
AjnI CCWGG 1 cut(s) 423
AluBI AGCT 3 cut(s) 158, 603, 859
AluI AGCT 3 cut(s) 158, 603, 859
Alw21I GWGCWC 1 cut(s) 327
Alw26I GTCTC 1 cut(s) 620
Alw44I GTGCAC 1 cut(s) 323
AlwI GGATC 6 cut(s) 184, 244, 424, 430, 673, 815
Ama87I CYCGRG 1 cut(s) 136
AoxI GGCC 4 cut(s) 118, 370, 728, 800
ApaLI GTGCAC 1 cut(s) 323
ApeKI GCWGC 1 cut(s) 398
ArsI GACNNNNNNTTYG 2 cut(s) 504, 536
AsiGI ACCGGT 1 cut(s) 90
AspLEI GCGC 2 cut(s) 46, 403
AspS9I GGNCC 6 cut(s) 119, 263, 317, 370, 728, 800
AsuC2I CCSGG 3 cut(s) 11, 137, 138
AsuHPI GGTGA 4 cut(s) 534, 635, 778, 784
AvaI CYCGRG 1 cut(s) 136
AvaII GGWCC 2 cut(s) 263, 317
BaeGI GKGCMC 1 cut(s) 327
BauI CACGAG 1 cut(s) 326
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 327
BbvI GCAGC 1 cut(s) 385
BccI CCATC 2 cut(s) 280, 763
BceAI ACGGC 3 cut(s) 57, 524, 705
BcgI CGANNNNNNTGC 8 cut(s) 274, 308, 434, 467, 468, 501, 535, 569
BciT130I CCWGG 1 cut(s) 425
BcnI CCSGG 3 cut(s) 11, 137, 138
BcoDI GTCTC 1 cut(s) 620
BfaI CTAG 2 cut(s) 296, 846
BfmI CTRYAG 3 cut(s) 153, 595, 714
BglI GCCNNNNNGGC 1 cut(s) 117
BglII AGATCT 1 cut(s) 666
BisI GCNGC 2 cut(s) 75, 399
BlsI GCNGC 2 cut(s) 76, 400
Bme1390I CCNGG 4 cut(s) 11, 137, 138, 425
Bme18I GGWCC 2 cut(s) 263, 317
BmeT110I CYCGRG 1 cut(s) 136
BmgT120I GGNCC 6 cut(s) 119, 263, 317, 370, 728, 800
BmiI GGNNCC 2 cut(s) 333, 801
BmrFI CCNGG 4 cut(s) 11, 137, 138, 425
BmsI GCATC 3 cut(s) 349, 516, 741
BpiI GAAGAC 1 cut(s) 377
BpuMI CCSGG 3 cut(s) 11, 137, 138
BsaJI CCNNGG 6 cut(s) 136, 266, 423, 424, 687, 731
BsaWI WCCGGW 4 cut(s) 90, 319, 376, 438
Bsc4I CCNNNNNNNGG 3 cut(s) 199, 379, 688
Bse118I RCCGGY 2 cut(s) 90, 802
Bse1I ACTGG 3 cut(s) 647, 792, 846
BseBI CCWGG 1 cut(s) 425
BseDI CCNNGG 6 cut(s) 136, 266, 423, 424, 687, 731
BseGI GGATG 2 cut(s) 531, 638
BseLI CCNNNNNNNGG 3 cut(s) 199, 379, 688
BseMII CTCAG 1 cut(s) 689
BseNI ACTGG 3 cut(s) 647, 792, 846
BseRI GAGGAG 1 cut(s) 761
BseSI GKGCMC 1 cut(s) 327
BseXI GCAGC 1 cut(s) 385
Bsh1236I CGCG 1 cut(s) 46
BshFI GGCC 4 cut(s) 120, 372, 730, 802
BshTI ACCGGT 1 cut(s) 90
BsiHKAI GWGCWC 1 cut(s) 327
BsiHKCI CYCGRG 1 cut(s) 136
BsiSI CCGG 7 cut(s) 11, 91, 137, 320, 377, 439, 803
BslFI GGGAC 2 cut(s) 163, 829
BslI CCNNNNNNNGG 3 cut(s) 199, 379, 688
BsmAI GTCTC 1 cut(s) 620
BsmFI GGGAC 2 cut(s) 163, 829
BsmI GAATGC 1 cut(s) 457
BsnI GGCC 4 cut(s) 120, 372, 730, 802
BsoBI CYCGRG 1 cut(s) 136
Bsp1286I GDGCHC 1 cut(s) 327
Bsp143I GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
BspACI CCGC 2 cut(s) 35, 74
BspANI GGCC 4 cut(s) 120, 372, 730, 802
BspCNI CTCAG 1 cut(s) 688
BspFNI CGCG 1 cut(s) 46
BspLI GGNNCC 2 cut(s) 333, 801
BspMAI CTGCAG 1 cut(s) 718
BspPI GGATC 6 cut(s) 184, 244, 424, 430, 673, 815
BsrFI RCCGGY 2 cut(s) 90, 802
BsrI ACTGG 3 cut(s) 647, 792, 846
BssAI RCCGGY 2 cut(s) 90, 802
BssECI CCNNGG 6 cut(s) 136, 266, 423, 424, 687, 731
BssMI GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 1 cut(s) 266
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 1 cut(s) 425
Bst4CI ACNGT 3 cut(s) 311, 550, 564
Bst6I CTCTTC 1 cut(s) 119
BstAPI GCANNNNNTGC 1 cut(s) 359
BstC8I GCNNGC 3 cut(s) 72, 84, 113
BstDEI CTNAG 4 cut(s) 515, 651, 675, 867
BstDSI CCRYGG 1 cut(s) 687
BstF5I GGATG 2 cut(s) 531, 638
BstFNI CGCG 1 cut(s) 46
BstHHI GCGC 2 cut(s) 46, 403
BstKTI GATC 8 cut(s) 25, 192, 252, 419, 438, 669, 681, 823
BstMAI GTCTC 1 cut(s) 620
BstMBI GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
BstMWI GCNNNNNNNGC 5 cut(s) 41, 83, 117, 359, 535
BstNI CCWGG 1 cut(s) 425
BstSCI CCNGG 4 cut(s) 9, 135, 136, 423
BstSFI CTRYAG 3 cut(s) 153, 595, 714
BstSLI GKGCMC 1 cut(s) 327
BstUI CGCG 1 cut(s) 46
BstV1I GCAGC 1 cut(s) 385
BstV2I GAAGAC 1 cut(s) 377
BstX2I RGATCY 3 cut(s) 249, 666, 678
BstXI CCANNNNNNTGG 1 cut(s) 694
BstYI RGATCY 3 cut(s) 249, 666, 678
BsuRI GGCC 4 cut(s) 120, 372, 730, 802
BtgI CCRYGG 1 cut(s) 687
BtsCI GGATG 2 cut(s) 531, 638
BtsI GCAGTG 1 cut(s) 335
BtsIMutI CAGTG 2 cut(s) 335, 839
Cac8I GCNNGC 3 cut(s) 72, 84, 113
CfoI GCGC 2 cut(s) 46, 403
Cfr10I RCCGGY 2 cut(s) 90, 802
Cfr13I GGNCC 6 cut(s) 119, 263, 317, 370, 728, 800
Cfr9I CCCGGG 1 cut(s) 136
CpoI CGGWCCG 1 cut(s) 317
CseI GACGC 1 cut(s) 768
CspAI ACCGGT 1 cut(s) 90
CspI CGGWCCG 1 cut(s) 317
CviAII CATG 4 cut(s) 194, 257, 354, 620
DdeI CTNAG 4 cut(s) 515, 651, 675, 867
DpnI GATC 8 cut(s) 24, 191, 251, 418, 437, 668, 680, 822
DpnII GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
DraIII CACNNNGTG 1 cut(s) 13
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
EciI GGCGGA 1 cut(s) 50
Eco130I CCWWGG 1 cut(s) 266
Eco47I GGWCC 2 cut(s) 263, 317
Eco88I CYCGRG 1 cut(s) 136
EcoO109I RGGNCCY 2 cut(s) 263, 370
EcoRII CCWGG 1 cut(s) 423
EcoT14I CCWWGG 1 cut(s) 266
EcoT22I ATGCAT 1 cut(s) 621
ErhI CCWWGG 1 cut(s) 266
FaeI CATG 4 cut(s) 197, 260, 357, 623
FaqI GGGAC 2 cut(s) 163, 829
FatI CATG 4 cut(s) 193, 256, 353, 619
Fnu4HI GCNGC 2 cut(s) 75, 399
FokI GGATG 2 cut(s) 538, 645
Fsp4HI GCNGC 2 cut(s) 75, 399
FspBI CTAG 2 cut(s) 296, 846
GlaI GCGC 2 cut(s) 45, 402
GluI GCNGC 2 cut(s) 75, 399
HaeIII GGCC 4 cut(s) 120, 372, 730, 802
HapII CCGG 7 cut(s) 11, 91, 137, 320, 377, 439, 803
HgaI GACGC 1 cut(s) 768
HhaI GCGC 2 cut(s) 46, 403
Hin1II CATG 4 cut(s) 197, 260, 357, 623
Hin6I GCGC 2 cut(s) 44, 401
HinP1I GCGC 2 cut(s) 44, 401
HincII GTYRAC 1 cut(s) 648
HindII GTYRAC 1 cut(s) 648
HinfI GANTC 1 cut(s) 484
HpaII CCGG 7 cut(s) 11, 91, 137, 320, 377, 439, 803
HphI GGTGA 4 cut(s) 534, 635, 778, 784
Hpy166II GTNNAC 3 cut(s) 325, 542, 648
Hpy188I TCNGA 6 cut(s) 465, 587, 678, 735, 762, 784
Hpy188III TCNNGA 1 cut(s) 180
Hpy8I GTNNAC 3 cut(s) 325, 542, 648
Hpy99I CGWCG 4 cut(s) 67, 510, 550, 784
HpyAV CCTTC 2 cut(s) 383, 460
HpyCH4III ACNGT 3 cut(s) 311, 550, 564
HpyCH4IV ACGT 1 cut(s) 724
HpyCH4V TGCA 7 cut(s) 82, 325, 340, 362, 619, 716, 754
HpyF10VI GCNNNNNNNGC 5 cut(s) 41, 83, 117, 359, 535
HpyF3I CTNAG 4 cut(s) 515, 651, 675, 867
HpySE526I ACGT 1 cut(s) 724
Hsp92II CATG 4 cut(s) 197, 260, 357, 623
HspAI GCGC 2 cut(s) 44, 401
Kzo9I GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
LmnI GCTCC 1 cut(s) 600
Lsp1109I GCAGC 1 cut(s) 385
LweI GCATC 3 cut(s) 349, 516, 741
MaeI CTAG 2 cut(s) 296, 846
MaeII ACGT 1 cut(s) 724
MalI GATC 8 cut(s) 24, 191, 251, 418, 437, 668, 680, 822
MboI GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
MboII GAAGA 2 cut(s) 136, 377
MflI RGATCY 3 cut(s) 249, 666, 678
MhlI GDGCHC 1 cut(s) 327
MluCI AATT 2 cut(s) 221, 850
MmeI TCCRAC 1 cut(s) 762
Mph1103I ATGCAT 1 cut(s) 621
MseI TTAA 3 cut(s) 366, 570, 710
MslI CAYNNNNRTG 1 cut(s) 692
MspI CCGG 7 cut(s) 11, 91, 137, 320, 377, 439, 803
MspR9I CCNGG 4 cut(s) 11, 137, 138, 425
Mva1269I GAATGC 1 cut(s) 457
MvaI CCWGG 1 cut(s) 425
MvnI CGCG 1 cut(s) 46
MwoI GCNNNNNNNGC 5 cut(s) 41, 83, 117, 359, 535
NciI CCSGG 3 cut(s) 11, 137, 138
NdeII GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
NlaIII CATG 4 cut(s) 197, 260, 357, 623
NlaIV GGNNCC 2 cut(s) 333, 801
NsiI ATGCAT 1 cut(s) 621
PasI CCCWGGG 1 cut(s) 424
PctI GAATGC 1 cut(s) 457
PfeI GAWTC 1 cut(s) 484
PflMI CCANNNNNTGG 1 cut(s) 199
PinAI ACCGGT 1 cut(s) 90
PkrI GCNGC 2 cut(s) 76, 400
PpuMI RGGWCCY 1 cut(s) 263
Psp5II RGGWCCY 1 cut(s) 263
Psp6I CCWGG 1 cut(s) 423
PspGI CCWGG 1 cut(s) 423
PspN4I GGNNCC 2 cut(s) 333, 801
PspPI GGNCC 6 cut(s) 119, 263, 317, 370, 728, 800
PspPPI RGGWCCY 1 cut(s) 263
PstI CTGCAG 1 cut(s) 718
PsuI RGATCY 3 cut(s) 249, 666, 678
RseI CAYNNNNRTG 1 cut(s) 692
Rsr2I CGGWCCG 1 cut(s) 317
RsrII CGGWCCG 1 cut(s) 317
SaqAI TTAA 3 cut(s) 366, 570, 710
SatI GCNGC 2 cut(s) 75, 399
Sau3AI GATC 8 cut(s) 22, 189, 249, 416, 435, 666, 678, 820
Sau96I GGNCC 6 cut(s) 119, 263, 317, 370, 728, 800
ScrFI CCNGG 4 cut(s) 11, 137, 138, 425
SduI GDGCHC 1 cut(s) 327
SetI ASST 9 cut(s) 160, 268, 304, 333, 585, 592, 605, 727, 861
SfaNI GCATC 3 cut(s) 349, 516, 741
SfcI CTRYAG 3 cut(s) 153, 595, 714
SinI GGWCC 2 cut(s) 263, 317
SmaI CCCGGG 1 cut(s) 138
SmiMI CAYNNNNRTG 1 cut(s) 692
Sse9I AATT 2 cut(s) 221, 850
SsiI CCGC 2 cut(s) 35, 74
SspMI CTAG 2 cut(s) 296, 846
StyD4I CCNGG 4 cut(s) 9, 135, 136, 423
StyI CCWWGG 1 cut(s) 266
TaaI ACNGT 3 cut(s) 311, 550, 564
TaiI ACGT 1 cut(s) 727
TaqI TCGA 5 cut(s) 62, 444, 487, 505, 534
TaqII GACCGA 1 cut(s) 305
TasI AATT 2 cut(s) 221, 850
TauI GCSGC 1 cut(s) 77
TfiI GAWTC 1 cut(s) 484
Tru1I TTAA 3 cut(s) 366, 570, 710
Tru9I TTAA 3 cut(s) 366, 570, 710
TscAI CASTG 2 cut(s) 342, 846
TseI GCWGC 1 cut(s) 398
TspDTI ATGAA 2 cut(s) 133, 210
TspMI CCCGGG 1 cut(s) 136
TspRI CASTG 2 cut(s) 342, 846
Van91I CCANNNNNTGG 1 cut(s) 199
VneI GTGCAC 1 cut(s) 323
VpaK11BI GGWCC 2 cut(s) 263, 317
XmaI CCCGGG 1 cut(s) 136
XspI CTAG 2 cut(s) 296, 846
Zsp2I ATGCAT 1 cut(s) 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.