DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0490961 |
| rosa_laevigata | RLG00000003376 RLG00000009552 RLG00000030034 RLG00000030420 |
| rosa_roxburghii | Rroxscaffold_3G00221510 Rroxscaffold_5G00337500 |
| rosa_rugosa | Rorug01G0065900 Rorug04G0009000 Rorug05G0079800 |
| rosa_samantha | Rh2DG569000 Rh3AG337800 Rh3DG302200 Rh5CG578600 Rh6AG091900 Rh6CG079600 Rh6CG206700 Rh6DG075100 Rh7BG186300 Rh7BG186400 |
| rosa_wichuraiana | Rw4G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 107, 149 |
| AluBI | AGCT | 1 cut(s) | 54 |
| AluI | AGCT | 1 cut(s) | 54 |
| Alw21I | GWGCWC | 2 cut(s) | 85, 222 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 29 |
| Bbv12I | GWGCWC | 2 cut(s) | 85, 222 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 53, 87 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BfmI | CTRYAG | 1 cut(s) | 235 |
| BmsI | GCATC | 2 cut(s) | 61, 142 |
| BpuEI | CTTGAG | 1 cut(s) | 230 |
| Bse3DI | GCAATG | 1 cut(s) | 183 |
| BseMI | GCAATG | 1 cut(s) | 183 |
| BseMII | CTCAG | 1 cut(s) | 206 |
| BsiHKAI | GWGCWC | 2 cut(s) | 85, 222 |
| Bsp1286I | GDGCHC | 2 cut(s) | 85, 222 |
| BspCNI | CTCAG | 1 cut(s) | 205 |
| BsrDI | GCAATG | 1 cut(s) | 183 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 80 |
| BstC8I | GCNNGC | 1 cut(s) | 76 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 60, 80 |
| BstSFI | CTRYAG | 1 cut(s) | 235 |
| BtsI | GCAGTG | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 1 cut(s) | 85 |
| Cac8I | GCNNGC | 1 cut(s) | 76 |
| CaiI | CAGNNNCTG | 1 cut(s) | 29 |
| CviJI | RGCY | 2 cut(s) | 54, 119 |
| CviKI_1 | RGCY | 2 cut(s) | 54, 119 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| Eco32I | GATATC | 1 cut(s) | 198 |
| EcoRV | GATATC | 1 cut(s) | 198 |
| FaiI | YATR | 3 cut(s) | 101, 231, 237 |
| FspBI | CTAG | 1 cut(s) | 96 |
| HinfI | GANTC | 3 cut(s) | 26, 41, 103 |
| Hpy188I | TCNGA | 3 cut(s) | 25, 40, 195 |
| Hpy188III | TCNNGA | 3 cut(s) | 16, 47, 86 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 60, 80 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| LmnI | GCTCC | 1 cut(s) | 160 |
| LpnPI | CCDG | 3 cut(s) | 15, 32, 71 |
| LweI | GCATC | 2 cut(s) | 61, 142 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MboII | GAAGA | 1 cut(s) | 161 |
| MhlI | GDGCHC | 2 cut(s) | 85, 222 |
| MnlI | CCTC | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 60, 80 |
| PfeI | GAWTC | 3 cut(s) | 26, 41, 103 |
| PstNI | CAGNNNCTG | 1 cut(s) | 29 |
| SduI | GDGCHC | 2 cut(s) | 85, 222 |
| SetI | ASST | 2 cut(s) | 56, 242 |
| SfaNI | GCATC | 2 cut(s) | 61, 142 |
| SfcI | CTRYAG | 1 cut(s) | 235 |
| SgeI | CNNG | 8 cut(s) | 28, 42, 59, 87, 98, 108, 181, 221 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| SspMI | CTAG | 1 cut(s) | 96 |
| TfiI | GAWTC | 3 cut(s) | 26, 41, 103 |
| TscAI | CASTG | 1 cut(s) | 85 |
| TspRI | CASTG | 1 cut(s) | 85 |
| XspI | CTAG | 1 cut(s) | 96 |