Rroxscaffold_3G00221510

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0010622
Physical Location & Seq
Forward (+)
4275350 .. 4279196
3847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00221510.1

Sequence Viewer

Length: 474 bp
ATGTCTGCAACTGCTGATATTGGAAGGTACAGGGATTACTTTAAAGATCTTGGCGGAGATGAACAGGTGGAAGTGCTTGCAATCCCTAACTCTGGCCAGAAAACCATTTTTCAGAAAAGGTTTCTTATCTTGAAGAGGCAATTACTTCTTTTCTATACTGGAATTTTTAATTGCTTTGCTGTATACTTCTTACATTTATTTAAGACTACCACCTCAACTGCTAACTGCTACAAAGTTGAGCATTTGAAAAGACCAGAAAACTGGGCATTAGTTGAGAAGGCCAAGTACATCTATGTTGTTAGTTTTTTCTCAACTGTATATCCAGAATCCATTCAGCTTGTTACTGAACATGTAGCTGCAAATAACAAGGTTTTCAGCATGAACCTTTCTACCCCATTTATCTGGGAATTTTTCAAGGATGTCCAGGAGAAAGCTAGCTGTGCTTGCCATGAAGATGTTTATCAAGTAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

157

Amino Acids

18.28

Weight (kDa)

6.9

Isoelectric Point (pI)

29.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 183
AciI CCGC 1 cut(s) 54
AcoI YGGCCR 1 cut(s) 94
AcsI RAATTY 2 cut(s) 162, 407
AfaI GTAC 2 cut(s) 29, 287
AfiI CCNNNNNNNGG 1 cut(s) 92
AflIII ACRYGT 1 cut(s) 349
AgsI TTSAA 3 cut(s) 133, 247, 415
AjnI CCWGG 1 cut(s) 423
AluBI AGCT 4 cut(s) 337, 356, 434, 438
AluI AGCT 4 cut(s) 337, 356, 434, 438
AoxI GGCC 2 cut(s) 94, 279
ApeKI GCWGC 1 cut(s) 356
ApoI RAATTY 2 cut(s) 162, 407
Asp700I GAANNNNTTC 1 cut(s) 330
AsuNHI GCTAGC 1 cut(s) 434
BalI TGGCCA 1 cut(s) 96
BarI GAAGNNNNNNTAC 2 cut(s) 269, 301
BbvI GCAGC 1 cut(s) 343
BciT130I CCWGG 1 cut(s) 425
BfaI CTAG 1 cut(s) 435
BglII AGATCT 1 cut(s) 46
BisI GCNGC 1 cut(s) 357
BlsI GCNGC 1 cut(s) 358
Bme1390I CCNGG 1 cut(s) 425
BmrFI CCNGG 1 cut(s) 425
BmrI ACTGGG 1 cut(s) 271
BmtI GCTAGC 1 cut(s) 438
BmuI ACTGGG 1 cut(s) 271
BsaBI GATNNNNATC 1 cut(s) 459
Bsc4I CCNNNNNNNGG 1 cut(s) 92
Bse1I ACTGG 2 cut(s) 163, 266
Bse8I GATNNNNATC 1 cut(s) 459
BseBI CCWGG 1 cut(s) 425
BseGI GGATG 1 cut(s) 424
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 1 cut(s) 92
BseNI ACTGG 2 cut(s) 163, 266
BseXI GCAGC 1 cut(s) 343
BshFI GGCC 2 cut(s) 96, 281
BslI CCNNNNNNNGG 1 cut(s) 92
BsnI GGCC 2 cut(s) 96, 281
Bsp143I GATC 1 cut(s) 46
BspACI CCGC 1 cut(s) 54
BspANI GGCC 2 cut(s) 96, 281
BspOI GCTAGC 1 cut(s) 438
BsrI ACTGG 2 cut(s) 163, 266
BssMI GATC 1 cut(s) 46
BssNAI GTATAC 1 cut(s) 184
Bst1107I GTATAC 1 cut(s) 184
Bst2UI CCWGG 1 cut(s) 425
Bst4CI ACNGT 1 cut(s) 316
Bst6I CTCTTC 1 cut(s) 128
BstC8I GCNNGC 3 cut(s) 78, 436, 445
BstF5I GGATG 1 cut(s) 424
BstKTI GATC 1 cut(s) 49
BstMBI GATC 1 cut(s) 46
BstMWI GCNNNNNNNGC 2 cut(s) 440, 444
BstNI CCWGG 1 cut(s) 425
BstNSI RCATGY 1 cut(s) 353
BstSCI CCNGG 1 cut(s) 423
BstV1I GCAGC 1 cut(s) 343
BstX2I RGATCY 1 cut(s) 46
BstXI CCANNNNNNTGG 2 cut(s) 261, 402
BstYI RGATCY 1 cut(s) 46
BstZ17I GTATAC 1 cut(s) 184
BsuRI GGCC 2 cut(s) 96, 281
BtsCI GGATG 1 cut(s) 424
Cac8I GCNNGC 3 cut(s) 78, 436, 445
Csp6I GTAC 2 cut(s) 28, 286
CviAII CATG 3 cut(s) 350, 379, 449
CviJI RGCY 6 cut(s) 96, 281, 337, 356, 434, 438
CviKI_1 RGCY 6 cut(s) 96, 281, 337, 356, 434, 438
CviQI GTAC 2 cut(s) 28, 286
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
DraI TTTAAA 1 cut(s) 43
EaeI YGGCCR 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 128
EarI CTCTTC 1 cut(s) 128
EciI GGCGGA 1 cut(s) 69
EcoRII CCWGG 1 cut(s) 423
FaeI CATG 3 cut(s) 353, 382, 452
FaiI YATR 7 cut(s) 156, 184, 294, 319, 351, 380, 450
FatI CATG 3 cut(s) 349, 378, 448
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 1 cut(s) 357
FokI GGATG 1 cut(s) 431
Fsp4HI GCNGC 1 cut(s) 357
FspBI CTAG 1 cut(s) 435
GluI GCNGC 1 cut(s) 357
HaeIII GGCC 2 cut(s) 96, 281
Hin1II CATG 3 cut(s) 353, 382, 452
HinfI GANTC 1 cut(s) 326
Hpy166II GTNNAC 1 cut(s) 184
Hpy188I TCNGA 1 cut(s) 114
Hpy188III TCNNGA 2 cut(s) 130, 323
Hpy8I GTNNAC 1 cut(s) 184
HpyAV CCTTC 2 cut(s) 18, 271
HpyCH4III ACNGT 1 cut(s) 316
HpyCH4V TGCA 3 cut(s) 8, 80, 359
HpyF10VI GCNNNNNNNGC 2 cut(s) 440, 444
Hsp92II CATG 3 cut(s) 353, 382, 452
Kzo9I GATC 1 cut(s) 46
Lsp1109I GCAGC 1 cut(s) 343
MaeI CTAG 1 cut(s) 435
MaeIII GTNAC 1 cut(s) 340
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MboII GAAGA 2 cut(s) 145, 464
MflI RGATCY 1 cut(s) 46
MlsI TGGCCA 1 cut(s) 96
MluCI AATT 4 cut(s) 140, 162, 169, 407
MluNI TGGCCA 1 cut(s) 96
MnlI CCTC 2 cut(s) 129, 223
Mox20I TGGCCA 1 cut(s) 96
MroXI GAANNNNTTC 1 cut(s) 330
MscI TGGCCA 1 cut(s) 96
MseI TTAA 3 cut(s) 42, 168, 201
MslI CAYNNNNRTG 1 cut(s) 453
Msp20I TGGCCA 1 cut(s) 96
MspR9I CCNGG 1 cut(s) 425
MvaI CCWGG 1 cut(s) 425
MwoI GCNNNNNNNGC 2 cut(s) 440, 444
NdeII GATC 1 cut(s) 46
NheI GCTAGC 1 cut(s) 434
NlaIII CATG 3 cut(s) 353, 382, 452
NspI RCATGY 1 cut(s) 353
PciI ACATGT 1 cut(s) 349
PdmI GAANNNNTTC 1 cut(s) 330
PfeI GAWTC 1 cut(s) 326
PfoI TCCNGGA 1 cut(s) 423
PkrI GCNGC 1 cut(s) 358
PscI ACATGT 1 cut(s) 349
Psp6I CCWGG 1 cut(s) 423
PspGI CCWGG 1 cut(s) 423
PsuI RGATCY 1 cut(s) 46
RsaI GTAC 2 cut(s) 29, 287
RsaNI GTAC 2 cut(s) 28, 286
RseI CAYNNNNRTG 1 cut(s) 453
SaqAI TTAA 3 cut(s) 42, 168, 201
SatI GCNGC 1 cut(s) 357
Sau3AI GATC 1 cut(s) 46
ScrFI CCNGG 1 cut(s) 425
SmiMI CAYNNNNRTG 1 cut(s) 453
Sse9I AATT 4 cut(s) 140, 162, 169, 407
SsiI CCGC 1 cut(s) 54
SspMI CTAG 1 cut(s) 435
StyD4I CCNGG 1 cut(s) 423
TaaI ACNGT 1 cut(s) 316
TasI AATT 4 cut(s) 140, 162, 169, 407
TatI WGTACW 1 cut(s) 285
TfiI GAWTC 1 cut(s) 326
Tru1I TTAA 3 cut(s) 42, 168, 201
Tru9I TTAA 3 cut(s) 42, 168, 201
TseI GCWGC 1 cut(s) 356
TspDTI ATGAA 3 cut(s) 75, 395, 465
XapI RAATTY 2 cut(s) 162, 407
XceI RCATGY 1 cut(s) 353
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 330
XspI CTAG 1 cut(s) 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.