Rh6DG075100

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0010622
Physical Location & Seq
Forward (+)
8465962 .. 8470669
4708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG075100.1

Sequence Viewer

Length: 720 bp
ATGCAGAAATCAGATTCTGGGTCATCAGATTCTCTGGATAGCTTATTTGGCGACAAAGATGCAAGCAGTGCTCTGGAAGTTTCTAGTATGATTCAACCAAAAGAGGCTGATTACCCATTTTGTTGCCTATCAGTTGAAGATGCTCTAATCAATGACTTGGTAGATTTTATCATTGCTTCTCAGATATCTGTGAAACTTGAGAATGAGCACAACTGCCATATCTATAGGTCTTGTGTGAAAATTAAAGTCGGACAATTTCAGAGGGGAATCGTACTTGGTATTAATAAAGGTGGTGTTGATGTGGAAGTGCTTGCAATCCCTAACTCTGGCCAGAAAACCATTTTTCAGAAAAGGTCACTTATTGTCAATTTGGCAACTGCTAACTGCTACAAAGTTGAGCATTTGAAAAGACCAGAAAACTGGGCATTAGTTGAGAAGGCCAAGTACATCTATGTTGCTGGTTTTTTCTCAACTGTATATCCAGAATCCATTCAGCTTGTTACTGAAGATGTAGCTGCAAATAACAAGGTTTTCAGCATGAACCTTTCTACCCCATTTATCTGTGAATTTTTCAAGGATGTCCAGGAGAAAGCTAGCTGTGCTTATGCCTCTTTAGAAAGGCTAAGGAATTCTAAGATTCTAGTGATAGATATCGTGGAAAAAGCCTCCATGAGATTGCTCGACTTTCAAGTCTTTTCCAATCTGTCCATAACCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

239

Amino Acids

26.63

Weight (kDa)

5.49

Isoelectric Point (pI)

30.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 94 - 197 1.9e-09 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 689
AcoI YGGCCR 1 cut(s) 328
AcsI RAATTY 2 cut(s) 566, 628
AcuI CTGAAG 1 cut(s) 525
AfaI GTAC 2 cut(s) 273, 446
AfiI CCNNNNNNNGG 1 cut(s) 326
AgsI TTSAA 5 cut(s) 95, 137, 406, 574, 689
AjnI CCWGG 1 cut(s) 582
AluBI AGCT 5 cut(s) 42, 496, 515, 593, 597
AluI AGCT 5 cut(s) 42, 496, 515, 593, 597
Alw21I GWGCWC 2 cut(s) 73, 210
AlwNI CAGNNNCTG 1 cut(s) 17
AoxI GGCC 2 cut(s) 328, 438
ApeKI GCWGC 1 cut(s) 515
ApoI RAATTY 2 cut(s) 566, 628
AseI ATTAAT 1 cut(s) 282
Asp700I GAANNNNTTC 1 cut(s) 489
AsuNHI GCTAGC 1 cut(s) 593
BalI TGGCCA 1 cut(s) 330
BarI GAAGNNNNNNTAC 2 cut(s) 428, 460
Bbv12I GWGCWC 2 cut(s) 73, 210
BbvI GCAGC 1 cut(s) 502
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BciT130I CCWGG 1 cut(s) 584
BfaI CTAG 4 cut(s) 84, 594, 641, 718
BfmI CTRYAG 1 cut(s) 223
BisI GCNGC 1 cut(s) 516
BlsI GCNGC 1 cut(s) 517
Bme1390I CCNGG 1 cut(s) 584
BmrFI CCNGG 1 cut(s) 584
BmrI ACTGGG 1 cut(s) 430
BmsI GCATC 2 cut(s) 49, 130
BmtI GCTAGC 1 cut(s) 597
BmuI ACTGGG 1 cut(s) 430
Bpu10I CCTNAGC 1 cut(s) 623
BpuEI CTTGAG 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 650
Bsc4I CCNNNNNNNGG 1 cut(s) 326
Bse1I ACTGG 1 cut(s) 425
Bse3DI GCAATG 1 cut(s) 171
Bse8I GATNNNNATC 1 cut(s) 650
BseBI CCWGG 1 cut(s) 584
BseGI GGATG 1 cut(s) 583
BseJI GATNNNNATC 1 cut(s) 650
BseLI CCNNNNNNNGG 1 cut(s) 326
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 1 cut(s) 194
BseNI ACTGG 1 cut(s) 425
BseXI GCAGC 1 cut(s) 502
BshFI GGCC 2 cut(s) 330, 440
BsiHKAI GWGCWC 2 cut(s) 73, 210
BslI CCNNNNNNNGG 1 cut(s) 326
BsnI GGCC 2 cut(s) 330, 440
Bsp1286I GDGCHC 2 cut(s) 73, 210
BspANI GGCC 2 cut(s) 330, 440
BspCNI CTCAG 1 cut(s) 193
BspOI GCTAGC 1 cut(s) 597
BsrDI GCAATG 1 cut(s) 171
BsrI ACTGG 1 cut(s) 425
Bst2UI CCWGG 1 cut(s) 584
Bst4CI ACNGT 1 cut(s) 475
BstAPI GCANNNNNTGC 1 cut(s) 68
BstC8I GCNNGC 3 cut(s) 64, 312, 595
BstDEI CTNAG 3 cut(s) 180, 623, 633
BstF5I GGATG 1 cut(s) 583
BstMWI GCNNNNNNNGC 3 cut(s) 48, 68, 599
BstNI CCWGG 1 cut(s) 584
BstSCI CCNGG 1 cut(s) 582
BstSFI CTRYAG 1 cut(s) 223
BstV1I GCAGC 1 cut(s) 502
BstXI CCANNNNNNTGG 1 cut(s) 420
BsuRI GGCC 2 cut(s) 330, 440
BtsCI GGATG 1 cut(s) 583
BtsI GCAGTG 1 cut(s) 73
BtsIMutI CAGTG 1 cut(s) 73
Cac8I GCNNGC 3 cut(s) 64, 312, 595
CaiI CAGNNNCTG 1 cut(s) 17
Csp6I GTAC 2 cut(s) 272, 445
CviAII CATG 2 cut(s) 538, 670
CviQI GTAC 2 cut(s) 272, 445
DdeI CTNAG 3 cut(s) 180, 623, 633
DrdI GACNNNNNNGTC 1 cut(s) 689
DseDI GACNNNNNNGTC 1 cut(s) 689
EaeI YGGCCR 1 cut(s) 328
Eco32I GATATC 2 cut(s) 186, 652
Eco57I CTGAAG 1 cut(s) 525
EcoRI GAATTC 1 cut(s) 628
EcoRII CCWGG 1 cut(s) 582
EcoRV GATATC 2 cut(s) 186, 652
FaeI CATG 2 cut(s) 541, 673
FaiI YATR 9 cut(s) 89, 219, 225, 453, 478, 539, 606, 671, 710
FatI CATG 2 cut(s) 537, 669
Fnu4HI GCNGC 1 cut(s) 516
FokI GGATG 1 cut(s) 590
Fsp4HI GCNGC 1 cut(s) 516
FspBI CTAG 4 cut(s) 84, 594, 641, 718
GluI GCNGC 1 cut(s) 516
HaeIII GGCC 2 cut(s) 330, 440
Hin1II CATG 2 cut(s) 541, 673
HinfI GANTC 6 cut(s) 14, 29, 91, 267, 485, 637
Hpy188I TCNGA 6 cut(s) 13, 28, 183, 251, 261, 348
Hpy188III TCNNGA 3 cut(s) 35, 74, 482
HpyAV CCTTC 1 cut(s) 430
HpyCH4III ACNGT 1 cut(s) 475
HpyCH4V TGCA 4 cut(s) 4, 62, 314, 518
HpyF10VI GCNNNNNNNGC 3 cut(s) 48, 68, 599
HpyF3I CTNAG 3 cut(s) 180, 623, 633
Hsp92II CATG 2 cut(s) 541, 673
Lsp1109I GCAGC 1 cut(s) 502
LweI GCATC 2 cut(s) 49, 130
MaeI CTAG 4 cut(s) 84, 594, 641, 718
MaeIII GTNAC 2 cut(s) 354, 499
MboII GAAGA 2 cut(s) 149, 518
MhlI GDGCHC 2 cut(s) 73, 210
MlsI TGGCCA 1 cut(s) 330
MluCI AATT 5 cut(s) 240, 254, 367, 566, 628
MluNI TGGCCA 1 cut(s) 330
MmeI TCCRAC 1 cut(s) 229
MnlI CCTC 4 cut(s) 97, 255, 619, 676
Mox20I TGGCCA 1 cut(s) 330
MroXI GAANNNNTTC 1 cut(s) 489
MscI TGGCCA 1 cut(s) 330
MseI TTAA 2 cut(s) 243, 282
Msp20I TGGCCA 1 cut(s) 330
MspR9I CCNGG 1 cut(s) 584
MvaI CCWGG 1 cut(s) 584
MwoI GCNNNNNNNGC 3 cut(s) 48, 68, 599
NheI GCTAGC 1 cut(s) 593
NlaIII CATG 2 cut(s) 541, 673
NmuCI GTSAC 1 cut(s) 354
PdmI GAANNNNTTC 1 cut(s) 489
PfeI GAWTC 6 cut(s) 14, 29, 91, 267, 485, 637
PfoI TCCNGGA 1 cut(s) 582
PkrI GCNGC 1 cut(s) 517
PshBI ATTAAT 1 cut(s) 282
Psp6I CCWGG 1 cut(s) 582
PspGI CCWGG 1 cut(s) 582
PstNI CAGNNNCTG 1 cut(s) 17
RsaI GTAC 2 cut(s) 273, 446
RsaNI GTAC 2 cut(s) 272, 445
SaqAI TTAA 2 cut(s) 243, 282
SatI GCNGC 1 cut(s) 516
ScrFI CCNGG 1 cut(s) 584
SduI GDGCHC 2 cut(s) 73, 210
SfaNI GCATC 2 cut(s) 49, 130
SfcI CTRYAG 1 cut(s) 223
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
Sse9I AATT 5 cut(s) 240, 254, 367, 566, 628
SspMI CTAG 4 cut(s) 84, 594, 641, 718
StyD4I CCNGG 1 cut(s) 582
TaaI ACNGT 1 cut(s) 475
TaqI TCGA 1 cut(s) 681
TasI AATT 5 cut(s) 240, 254, 367, 566, 628
TatI WGTACW 1 cut(s) 444
TfiI GAWTC 6 cut(s) 14, 29, 91, 267, 485, 637
Tru1I TTAA 2 cut(s) 243, 282
Tru9I TTAA 2 cut(s) 243, 282
TscAI CASTG 1 cut(s) 73
TseFI GTSAC 1 cut(s) 354
TseI GCWGC 1 cut(s) 515
Tsp45I GTSAC 1 cut(s) 354
TspDTI ATGAA 1 cut(s) 554
TspRI CASTG 1 cut(s) 73
VspI ATTAAT 1 cut(s) 282
XapI RAATTY 2 cut(s) 566, 628
XmnI GAANNNNTTC 1 cut(s) 489
XspI CTAG 4 cut(s) 84, 594, 641, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.