DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0490961 |
| rosa_laevigata | RLG00000003376 RLG00000009552 RLG00000030034 RLG00000030420 |
| rosa_roxburghii | Rroxscaffold_3G00221510 Rroxscaffold_5G00337500 |
| rosa_rugosa | Rorug01G0065900 Rorug04G0009000 Rorug05G0079800 |
| rosa_samantha | Rh2DG569000 Rh3AG337800 Rh3DG302200 Rh5CG578600 Rh6AG091900 Rh6CG079600 Rh6CG206700 Rh6DG075100 Rh7BG186300 Rh7BG186400 |
| rosa_wichuraiana | Rw4G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 273 |
| AgsI | TTSAA | 2 cut(s) | 95, 137 |
| AluBI | AGCT | 1 cut(s) | 42 |
| AluI | AGCT | 1 cut(s) | 42 |
| Alw21I | GWGCWC | 2 cut(s) | 73, 210 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| AseI | ATTAAT | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 2 cut(s) | 73, 210 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 41, 75 |
| BfaI | CTAG | 1 cut(s) | 84 |
| BfmI | CTRYAG | 1 cut(s) | 223 |
| BmsI | GCATC | 2 cut(s) | 49, 130 |
| BpuEI | CTTGAG | 1 cut(s) | 218 |
| Bse3DI | GCAATG | 1 cut(s) | 171 |
| BseMI | GCAATG | 1 cut(s) | 171 |
| BseMII | CTCAG | 1 cut(s) | 194 |
| BsiHKAI | GWGCWC | 2 cut(s) | 73, 210 |
| Bsp1286I | GDGCHC | 2 cut(s) | 73, 210 |
| BspCNI | CTCAG | 1 cut(s) | 193 |
| BsrDI | GCAATG | 1 cut(s) | 171 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 68 |
| BstC8I | GCNNGC | 1 cut(s) | 64 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 48, 68 |
| BstSFI | CTRYAG | 1 cut(s) | 223 |
| BtsI | GCAGTG | 1 cut(s) | 73 |
| BtsIMutI | CAGTG | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 1 cut(s) | 64 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| Csp6I | GTAC | 1 cut(s) | 272 |
| CviJI | RGCY | 2 cut(s) | 42, 107 |
| CviKI_1 | RGCY | 2 cut(s) | 42, 107 |
| CviQI | GTAC | 1 cut(s) | 272 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| Eco32I | GATATC | 1 cut(s) | 186 |
| EcoRV | GATATC | 1 cut(s) | 186 |
| FaiI | YATR | 3 cut(s) | 89, 219, 225 |
| FspBI | CTAG | 1 cut(s) | 84 |
| HinfI | GANTC | 4 cut(s) | 14, 29, 91, 267 |
| Hpy188I | TCNGA | 5 cut(s) | 13, 28, 183, 251, 261 |
| Hpy188III | TCNNGA | 2 cut(s) | 35, 74 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 62, 306 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 48, 68 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| LmnI | GCTCC | 1 cut(s) | 148 |
| LpnPI | CCDG | 3 cut(s) | 3, 20, 59 |
| LweI | GCATC | 2 cut(s) | 49, 130 |
| MaeI | CTAG | 1 cut(s) | 84 |
| MboII | GAAGA | 1 cut(s) | 149 |
| MhlI | GDGCHC | 2 cut(s) | 73, 210 |
| MluCI | AATT | 2 cut(s) | 240, 254 |
| MmeI | TCCRAC | 1 cut(s) | 229 |
| MnlI | CCTC | 2 cut(s) | 97, 255 |
| MseI | TTAA | 2 cut(s) | 243, 282 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 48, 68 |
| PfeI | GAWTC | 4 cut(s) | 14, 29, 91, 267 |
| PshBI | ATTAAT | 1 cut(s) | 282 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| RsaI | GTAC | 1 cut(s) | 273 |
| RsaNI | GTAC | 1 cut(s) | 272 |
| SaqAI | TTAA | 2 cut(s) | 243, 282 |
| SduI | GDGCHC | 2 cut(s) | 73, 210 |
| SetI | ASST | 3 cut(s) | 44, 230, 292 |
| SfaNI | GCATC | 2 cut(s) | 49, 130 |
| SfcI | CTRYAG | 1 cut(s) | 223 |
| SgeI | CNNG | 9 cut(s) | 30, 47, 75, 86, 96, 169, 209, 243, 287 |
| SmlI | CTYRAG | 1 cut(s) | 197 |
| SmoI | CTYRAG | 1 cut(s) | 197 |
| Sse9I | AATT | 2 cut(s) | 240, 254 |
| SspMI | CTAG | 1 cut(s) | 84 |
| TasI | AATT | 2 cut(s) | 240, 254 |
| TfiI | GAWTC | 4 cut(s) | 14, 29, 91, 267 |
| Tru1I | TTAA | 2 cut(s) | 243, 282 |
| Tru9I | TTAA | 2 cut(s) | 243, 282 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TspRI | CASTG | 1 cut(s) | 73 |
| VspI | ATTAAT | 1 cut(s) | 282 |
| XspI | CTAG | 1 cut(s) | 84 |