Rh6AG091900

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0010622
Physical Location & Seq
Forward (+)
13628371 .. 13640763
12393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG091900.1

Sequence Viewer

Length: 903 bp
ATGGCAATTCCGAACCCACATGTGAATCCAACCTCAACTGGCCCAATATTATTCTTCGCCCCAGGCCTTGAATTTCCCAAGGCCGGGCTTGGATATGCTGATTACCCATTTTGTTGCCTATCAGTTGAAGATGCTCTAATCAATGACTTGGTAGATTTTATCATTGCTTCTCAGATATCTGTGAAACTTGAGAATGAGCACAACTGCCATATCTATAGGTCTTGTGTGAAAATTAAAGTCGGACAATTTCAGAGGGGAATCGTACTTGGTATTAATAAAGGTGGTGTTGATGTGGAAGTGCTTGCAATCCCTAACTCTGGCCAGAAAACCATTTTTCAGAAAAGGTCACTTATTGTCAATTTGGCAACTGCTAACTGCTACAAAGTTGAGCATTTGAAAAGACCAGAAAACTGGGCATTAGTTGAGAAGGCCAAGTACATCTATGTTGCTGGTTTTTTCTCAACTGTATATCCAGAATCCATTCAGCTTGTTACTGAAGATGTAGCTGCAAATAACAAGGTTTTCAGCATGAACCTTTCTACCCCATTTATCTGTGAATTTTTCAAGGATGTCCAGGAGAAAGCTAGCTGTGCTGCTAGGGACAAGGGATACAGGCAAGGGCGCATTGGTGATTGTCAATGCAGCAGCGAAGGGCTGACTCGACTGGTAGCCGCTGCCCACGATCCAGTCACCACCCTGCTGGCGCTGTTCCACCTCAGGAATCACTACCAGGAGAATCTTTTCTCCAATAGTGCTGGTCGACAATGTCTATTGAGTGGAGGAGAACAAGATAAAGCTGGACCCGACGATTGGACTGAGATGCGCTGCCGAGCCGAAGAAGTTGATGGCGACAGAGTTAAGGGTTTTGAGGAGGGTGAGAGAGCAATTTGTGGTTTATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

300

Amino Acids

33.25

Weight (kDa)

5.85

Isoelectric Point (pI)

30.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 91 - 193 4.6e-09 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 760
AciI CCGC 1 cut(s) 672
AclWI GGATC 1 cut(s) 677
AcoI YGGCCR 1 cut(s) 319
AcsI RAATTY 2 cut(s) 71, 557
AcuI CTGAAG 1 cut(s) 516
AfaI GTAC 2 cut(s) 264, 437
AfiI CCNNNNNNNGG 4 cut(s) 83, 84, 317, 810
AflIII ACRYGT 1 cut(s) 19
AgsI TTSAA 4 cut(s) 71, 128, 397, 565
AjnI CCWGG 3 cut(s) 61, 573, 729
AluBI AGCT 5 cut(s) 487, 506, 584, 588, 797
AluI AGCT 5 cut(s) 487, 506, 584, 588, 797
Alw21I GWGCWC 1 cut(s) 201
AlwI GGATC 1 cut(s) 677
AoxI GGCC 5 cut(s) 40, 64, 81, 319, 429
ApeKI GCWGC 6 cut(s) 506, 593, 642, 645, 674, 825
ApoI RAATTY 2 cut(s) 71, 557
AseI ATTAAT 1 cut(s) 273
Asp700I GAANNNNTTC 2 cut(s) 480, 740
AspLEI GCGC 3 cut(s) 624, 706, 825
AspS9I GGNCC 2 cut(s) 41, 800
AsuC2I CCSGG 1 cut(s) 85
AsuHPI GGTGA 3 cut(s) 641, 682, 887
AsuNHI GCTAGC 1 cut(s) 584
AvaII GGWCC 1 cut(s) 800
AxyI CCTNAGG 1 cut(s) 716
BalI TGGCCA 1 cut(s) 321
BarI GAAGNNNNNNTAC 2 cut(s) 419, 451
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 6 cut(s) 493, 580, 654, 657, 661, 812
BccI CCATC 1 cut(s) 839
BciT130I CCWGG 3 cut(s) 63, 575, 731
BciVI GTATCC 1 cut(s) 602
BcnI CCSGG 1 cut(s) 85
BfaI CTAG 2 cut(s) 585, 597
BfmI CTRYAG 1 cut(s) 214
BfoI RGCGCY 1 cut(s) 707
BfuI GTATCC 1 cut(s) 602
BisI GCNGC 7 cut(s) 507, 594, 643, 646, 672, 675, 826
BlsI GCNGC 7 cut(s) 508, 595, 644, 647, 673, 676, 827
Bme1390I CCNGG 4 cut(s) 63, 85, 575, 731
Bme18I GGWCC 1 cut(s) 800
BmgT120I GGNCC 2 cut(s) 41, 800
BmiI GGNNCC 1 cut(s) 802
BmrFI CCNGG 4 cut(s) 63, 85, 575, 731
BmrI ACTGGG 1 cut(s) 421
BmsI GCATC 2 cut(s) 121, 810
BmtI GCTAGC 1 cut(s) 588
BmuI ACTGGG 1 cut(s) 421
BpuEI CTTGAG 1 cut(s) 209
BpuMI CCSGG 1 cut(s) 85
BsaJI CCNNGG 2 cut(s) 61, 78
Bsc4I CCNNNNNNNGG 4 cut(s) 83, 84, 317, 810
Bse1I ACTGG 4 cut(s) 43, 416, 669, 686
Bse21I CCTNAGG 1 cut(s) 716
Bse3DI GCAATG 1 cut(s) 162
BseBI CCWGG 3 cut(s) 63, 575, 731
BseDI CCNNGG 2 cut(s) 61, 78
BseGI GGATG 1 cut(s) 574
BseLI CCNNNNNNNGG 4 cut(s) 83, 84, 317, 810
BseMI GCAATG 1 cut(s) 162
BseMII CTCAG 3 cut(s) 185, 730, 807
BseNI ACTGG 4 cut(s) 43, 416, 669, 686
BseRI GAGGAG 2 cut(s) 795, 884
BseXI GCAGC 6 cut(s) 493, 580, 654, 657, 661, 812
BshFI GGCC 5 cut(s) 42, 66, 83, 321, 431
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 1 cut(s) 84
BslFI GGGAC 1 cut(s) 614
BslI CCNNNNNNNGG 4 cut(s) 83, 84, 317, 810
BsmFI GGGAC 1 cut(s) 614
BsnI GGCC 5 cut(s) 42, 66, 83, 321, 431
Bsp1286I GDGCHC 1 cut(s) 201
Bsp143I GATC 1 cut(s) 682
BspACI CCGC 1 cut(s) 672
BspANI GGCC 5 cut(s) 42, 66, 83, 321, 431
BspCNI CTCAG 3 cut(s) 184, 729, 808
BspLI GGNNCC 1 cut(s) 802
BspOI GCTAGC 1 cut(s) 588
BspPI GGATC 1 cut(s) 677
BsrDI GCAATG 1 cut(s) 162
BsrI ACTGG 4 cut(s) 43, 416, 669, 686
BssECI CCNNGG 2 cut(s) 61, 78
BssMI GATC 1 cut(s) 682
BssT1I CCWWGG 1 cut(s) 78
Bst2UI CCWGG 3 cut(s) 63, 575, 731
Bst4CI ACNGT 1 cut(s) 466
BstC8I GCNNGC 3 cut(s) 303, 586, 702
BstDEI CTNAG 3 cut(s) 171, 716, 816
BstF5I GGATG 1 cut(s) 574
BstH2I RGCGCY 1 cut(s) 707
BstHHI GCGC 3 cut(s) 624, 706, 825
BstKTI GATC 1 cut(s) 685
BstMBI GATC 1 cut(s) 682
BstMWI GCNNNNNNNGC 1 cut(s) 590
BstNI CCWGG 3 cut(s) 63, 575, 731
BstNSI RCATGY 1 cut(s) 23
BstSCI CCNGG 4 cut(s) 61, 83, 573, 729
BstSFI CTRYAG 1 cut(s) 214
BstV1I GCAGC 6 cut(s) 493, 580, 654, 657, 661, 812
BstXI CCANNNNNNTGG 2 cut(s) 411, 700
Bsu36I CCTNAGG 1 cut(s) 716
BsuI GTATCC 1 cut(s) 602
BsuRI GGCC 5 cut(s) 42, 66, 83, 321, 431
BtsCI GGATG 1 cut(s) 574
Cac8I GCNNGC 3 cut(s) 303, 586, 702
CfoI GCGC 3 cut(s) 624, 706, 825
Cfr13I GGNCC 2 cut(s) 41, 800
Csp6I GTAC 2 cut(s) 263, 436
CviAII CATG 2 cut(s) 20, 529
CviQI GTAC 2 cut(s) 263, 436
DdeI CTNAG 3 cut(s) 171, 716, 816
DpnI GATC 1 cut(s) 684
DpnII GATC 1 cut(s) 682
EaeI YGGCCR 1 cut(s) 319
Eco130I CCWWGG 1 cut(s) 78
Eco147I AGGCCT 1 cut(s) 66
Eco32I GATATC 1 cut(s) 177
Eco47I GGWCC 1 cut(s) 800
Eco57I CTGAAG 1 cut(s) 516
Eco81I CCTNAGG 1 cut(s) 716
EcoRII CCWGG 3 cut(s) 61, 573, 729
EcoRV GATATC 1 cut(s) 177
EcoT14I CCWWGG 1 cut(s) 78
ErhI CCWWGG 1 cut(s) 78
FaeI CATG 2 cut(s) 23, 532
FaiI YATR 8 cut(s) 21, 96, 210, 216, 444, 469, 530, 898
FaqI GGGAC 1 cut(s) 614
FatI CATG 2 cut(s) 19, 528
FblI GTMKAC 1 cut(s) 760
Fnu4HI GCNGC 7 cut(s) 507, 594, 643, 646, 672, 675, 826
FokI GGATG 1 cut(s) 581
Fsp4HI GCNGC 7 cut(s) 507, 594, 643, 646, 672, 675, 826
FspBI CTAG 2 cut(s) 585, 597
GlaI GCGC 3 cut(s) 623, 705, 824
GluI GCNGC 7 cut(s) 507, 594, 643, 646, 672, 675, 826
HaeII RGCGCY 1 cut(s) 707
HaeIII GGCC 5 cut(s) 42, 66, 83, 321, 431
HapII CCGG 1 cut(s) 84
HhaI GCGC 3 cut(s) 624, 706, 825
Hin1II CATG 2 cut(s) 23, 532
Hin6I GCGC 3 cut(s) 622, 704, 823
HinP1I GCGC 3 cut(s) 622, 704, 823
HincII GTYRAC 1 cut(s) 761
HindII GTYRAC 1 cut(s) 761
HinfI GANTC 6 cut(s) 25, 258, 476, 658, 721, 736
HpaII CCGG 1 cut(s) 84
HphI GGTGA 3 cut(s) 641, 682, 887
Hpy166II GTNNAC 1 cut(s) 761
Hpy188I TCNGA 5 cut(s) 12, 174, 242, 252, 339
Hpy188III TCNNGA 2 cut(s) 473, 718
Hpy8I GTNNAC 1 cut(s) 761
Hpy99I CGWCG 1 cut(s) 809
HpyAV CCTTC 2 cut(s) 421, 644
HpyCH4III ACNGT 1 cut(s) 466
HpyCH4V TGCA 3 cut(s) 305, 509, 642
HpyF10VI GCNNNNNNNGC 1 cut(s) 590
HpyF3I CTNAG 3 cut(s) 171, 716, 816
Hsp92II CATG 2 cut(s) 23, 532
HspAI GCGC 3 cut(s) 622, 704, 823
Kzo9I GATC 1 cut(s) 682
Lsp1109I GCAGC 6 cut(s) 493, 580, 654, 657, 661, 812
LweI GCATC 2 cut(s) 121, 810
MaeI CTAG 2 cut(s) 585, 597
MaeIII GTNAC 3 cut(s) 345, 490, 688
MalI GATC 1 cut(s) 684
MboI GATC 1 cut(s) 682
MboII GAAGA 4 cut(s) 46, 140, 509, 848
MhlI GDGCHC 1 cut(s) 201
MlsI TGGCCA 1 cut(s) 321
MluCI AATT 7 cut(s) 6, 71, 231, 245, 358, 557, 885
MluNI TGGCCA 1 cut(s) 321
MlyI GAGTC 1 cut(s) 652
MmeI TCCRAC 2 cut(s) 53, 220
MnlI CCTC 6 cut(s) 43, 246, 725, 773, 862, 865
Mox20I TGGCCA 1 cut(s) 321
MroXI GAANNNNTTC 2 cut(s) 480, 740
MscI TGGCCA 1 cut(s) 321
MseI TTAA 3 cut(s) 234, 273, 858
Msp20I TGGCCA 1 cut(s) 321
MspA1I CMGCKG 1 cut(s) 674
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 4 cut(s) 63, 85, 575, 731
MvaI CCWGG 3 cut(s) 63, 575, 731
MwoI GCNNNNNNNGC 1 cut(s) 590
NciI CCSGG 1 cut(s) 85
NdeII GATC 1 cut(s) 682
NheI GCTAGC 1 cut(s) 584
NlaIII CATG 2 cut(s) 23, 532
NlaIV GGNNCC 1 cut(s) 802
NmeAIII GCCGAG 1 cut(s) 854
NmuCI GTSAC 2 cut(s) 345, 688
NspI RCATGY 1 cut(s) 23
PceI AGGCCT 1 cut(s) 66
PciI ACATGT 1 cut(s) 19
PdmI GAANNNNTTC 2 cut(s) 480, 740
PfeI GAWTC 5 cut(s) 25, 258, 476, 721, 736
PflFI GACNNNGTC 1 cut(s) 765
PfoI TCCNGGA 1 cut(s) 573
PkrI GCNGC 7 cut(s) 508, 595, 644, 647, 673, 676, 827
PleI GAGTC 1 cut(s) 652
PpsI GAGTC 1 cut(s) 652
PscI ACATGT 1 cut(s) 19
PshBI ATTAAT 1 cut(s) 273
Psp6I CCWGG 3 cut(s) 61, 573, 729
PspGI CCWGG 3 cut(s) 61, 573, 729
PspN4I GGNNCC 1 cut(s) 802
PspPI GGNCC 2 cut(s) 41, 800
PsyI GACNNNGTC 1 cut(s) 765
RsaI GTAC 2 cut(s) 264, 437
RsaNI GTAC 2 cut(s) 263, 436
SalI GTCGAC 1 cut(s) 759
SaqAI TTAA 3 cut(s) 234, 273, 858
SatI GCNGC 7 cut(s) 507, 594, 643, 646, 672, 675, 826
Sau3AI GATC 1 cut(s) 682
Sau96I GGNCC 2 cut(s) 41, 800
SchI GAGTC 1 cut(s) 652
ScrFI CCNGG 4 cut(s) 63, 85, 575, 731
SduI GDGCHC 1 cut(s) 201
SfaNI GCATC 2 cut(s) 121, 810
SfcI CTRYAG 1 cut(s) 214
SinI GGWCC 1 cut(s) 800
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
Sse9I AATT 7 cut(s) 6, 71, 231, 245, 358, 557, 885
SseBI AGGCCT 1 cut(s) 66
SsiI CCGC 1 cut(s) 672
SspI AATATT 1 cut(s) 48
SspMI CTAG 2 cut(s) 585, 597
StuI AGGCCT 1 cut(s) 66
StyD4I CCNGG 4 cut(s) 61, 83, 573, 729
StyI CCWWGG 1 cut(s) 78
TaaI ACNGT 1 cut(s) 466
TaqI TCGA 2 cut(s) 661, 760
TasI AATT 7 cut(s) 6, 71, 231, 245, 358, 557, 885
TatI WGTACW 1 cut(s) 435
TauI GCSGC 1 cut(s) 674
TfiI GAWTC 5 cut(s) 25, 258, 476, 721, 736
Tru1I TTAA 3 cut(s) 234, 273, 858
Tru9I TTAA 3 cut(s) 234, 273, 858
TseFI GTSAC 2 cut(s) 345, 688
TseI GCWGC 6 cut(s) 506, 593, 642, 645, 674, 825
Tsp45I GTSAC 2 cut(s) 345, 688
TspDTI ATGAA 1 cut(s) 545
Tth111I GACNNNGTC 1 cut(s) 765
VpaK11BI GGWCC 1 cut(s) 800
VspI ATTAAT 1 cut(s) 273
XapI RAATTY 2 cut(s) 71, 557
XceI RCATGY 1 cut(s) 23
XmiI GTMKAC 1 cut(s) 760
XmnI GAANNNNTTC 2 cut(s) 480, 740
XspI CTAG 2 cut(s) 585, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.