Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002359

Physical Location & Seq

Genomic Coordinates Forward (+)

16764614 .. 16768669

Gene Structure 4056 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ37160

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1266 bp

ATGTCTTCGTGTTTTACCGGTGGCGGAAGAACCTATGCATTTGAGCTTGACATAGTCAAATCCCCTTCCACTTCAACCCGGACTTCACAAACATCCTCACCTTCTTCCACTCTCTCGGAATCAAGCAATTCGGCACTCGCAATCTCCACCCGAAAACCCCGCACCCCTCGAAAACGCCCCAACCAGACTTACAATGAAGCCGCTGCATTACTCTCCACTGCTTACCCCAACGTCTTCTCCACCAAAATCCTCACAAATCCTCGCAAATCCACCAAACCCCACGACTCCTTCCTCGACCCATCTTCCGAACTGCTCCTCCCTTTCAGACTCATCGACAATTCCGCCACTTTCCTCCTCCACAACCCCCCCATCCGAGAAAAACCCAATTCCCGATTCGAGCCGAAAGCCATCAATTCATTTGAAAAGTCTTGCAATTCGCCCGGGGAGTTCAATTCCCCGGTGAATTTCGACCCCAATCCCAACTCCTCCATGGAGCTCTGCGATGACTTCGACGCGGAATCTATGCTGGACGAGGAAATTGAGGAGGGTATTGATAGCATCATGGGGAGTAGCACCAGCATGAACATCGATTCCGTCGATGAGTCCACCAGCAGTGACCCAATGATGACGGACTCCTGCTATGGCTACCCAATGGGGTTGGGATTTGGCGGGAATTTCGAACTCGGGTTCGGATTCAGAAGAGGAGGAGTGAGACCGTTGAGGCAAGTCGACGATGGAGTGAATTGGTGGAGTTTCCCGACCGTCGATGTTGTTGAAATCTCGCCCAGATTCAACAAATCTCGGCCGTCTGTTCCGGCTCCGTCGGCCCCACCTTCTGCCGGGAAGAAGAAGAAGAAGAAGATGGAGAAGCTAGCGGTGGTGGAGTCCAAGCTGGCGGAGTTGCCGCTGAAGGAGAAGAGTCCGAAGGAGGAGTCGGAGCCTGGGCTGATGCTGAAGCTGGACTACGACGACGTTTTGAGTGCTTGGTCCGACAAAGCGTCGCCGTTTCCGGAGGAGCTGCAGGGCGGCGCTGATGGAAACGACGTCTCTGCCAGACTGGCGCAGATTGATTTATTCACGGATGCCGGTGGTTTGAGAGAGGCTAGCGTGCTCCGCTACAAGGAAAAGCGACGTACGCGCCTCTTTTCGAAGAAGATCAGGTATCAAGTCCGCAAAGTCAATGCTGATCGACGGCCAAGAATGAAGGGTAGATTTGTGAGAAGGCCAAACTCTAGCACAAATGGTCAAAGACAAAAGGAAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0015031 GO:0015833 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT

Protein Analysis

421

Amino Acids

46.71

Weight (kDa)

8.95

Isoelectric Point (pI)

56.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCT	PF06203	366 - 408	2.3e-17	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25990 AT4G25990 AT4G25990 AT5G57180 AT5G57180 AT5G57180 AT5G57180
fragaria_vesca	FvH4_2g01490 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780
malus_domestica	MD13G1239300.v1.1 MD16G1248400.v1.1
prunus_persica	Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1
pyrus_communis	pycom13g21340 pycom16g20820
rosa_chinensis	RchiOBHm_Chr4g0399481
rosa_laevigata	RLG00000009263
rosa_multiflora	Rmu_sc0002285.1_g000032 Rmu_sc0004311.1_g000007
rosa_roxburghii	Rroxscaffold_5G00344410
rosa_rugosa	Rorug04G0017200 Rorug04G0017300 Rorug04G0017300
rosa_samantha	Rh4AG095100 Rh4BG092500 Rh4CG103600 Rh4DG087400
rosa_wichuraiana	Rw4G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1047
AccI	GTMKAC	1 cut(s)	729
AccII	CGCG	2 cut(s)	515, 1138
AccIII	TCCGGA	1 cut(s)	1009
AcoI	YGGCCR	2 cut(s)	803, 1193
AcsI	RAATTY	2 cut(s)	463, 673
AcuI	CTGAAG	2 cut(s)	929, 974
AcyI	GRCGYC	1 cut(s)	1044
AfaI	GTAC	1 cut(s)	1135
AfiI	CCNNNNNNNGG	2 cut(s)	839, 1120
AgeI	ACCGGT	1 cut(s)	17
AgsI	TTSAA	5 cut(s)	75, 422, 451, 776, 793
AhdI	GACNNNNNGTC	1 cut(s)	997
AjnI	CCWGG	1 cut(s)	940
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
AloI	GAACNNNNNNTCC	4 cut(s)	300, 332, 575, 607
AluBI	AGCT	6 cut(s)	46, 496, 871, 892, 958, 1018
AluI	AGCT	6 cut(s)	46, 496, 871, 892, 958, 1018
Alw21I	GWGCWC	2 cut(s)	498, 1113
Alw26I	GTCTC	2 cut(s)	706, 1051
Ama87I	CYCGRG	2 cut(s)	440, 683
Aor13HI	TCCGGA	1 cut(s)	1009
AoxI	GGCC	4 cut(s)	803, 825, 1193, 1223
ApeKI	GCWGC	2 cut(s)	203, 1018
ApoI	RAATTY	2 cut(s)	463, 673
ArsI	GACNNNNNNTTYG	2 cut(s)	917, 949
AsiGI	ACCGGT	1 cut(s)	17
AspLEI	GCGC	3 cut(s)	1031, 1063, 1140
AspS9I	GGNCC	2 cut(s)	826, 987
AsuC2I	CCSGG	5 cut(s)	79, 441, 442, 458, 841
AsuHPI	GGTGA	2 cut(s)	90, 472
AsuII	TTCGAA	2 cut(s)	678, 1148
AsuNHI	GCTAGC	2 cut(s)	871, 1103
AvaI	CYCGRG	2 cut(s)	440, 683
AvaII	GGWCC	1 cut(s)	987
BanII	GRGCYC	1 cut(s)	498
BarI	GAAGNNNNNNTAC	2 cut(s)	947, 979
BbsI	GAAGAC	1 cut(s)	226
Bbv12I	GWGCWC	2 cut(s)	498, 1113
BbvI	GCAGC	2 cut(s)	190, 1005
BccI	CCATC	6 cut(s)	307, 377, 416, 728, 856, 1028
BceAI	ACGGC	3 cut(s)	790, 988, 1208
BcgI	CGANNNNNNTGC	4 cut(s)	568, 602, 1031, 1065
BciT130I	CCWGG	1 cut(s)	942
BcnI	CCSGG	5 cut(s)	79, 441, 442, 458, 841
BcoDI	GTCTC	2 cut(s)	706, 1051
BfaI	CTAG	3 cut(s)	872, 1104, 1233
BfmI	CTRYAG	1 cut(s)	1019
BfoI	RGCGCY	1 cut(s)	1032
BglI	GCCNNNNNGGC	1 cut(s)	1058
BisI	GCNGC	5 cut(s)	201, 204, 905, 1019, 1027
BlsI	GCNGC	5 cut(s)	202, 205, 906, 1020, 1028
Bme1390I	CCNGG	6 cut(s)	79, 441, 442, 458, 841, 942
Bme18I	GGWCC	1 cut(s)	987
BmeRI	GACNNNNNGTC	1 cut(s)	997
BmeT110I	CYCGRG	2 cut(s)	440, 683
BmgT120I	GGNCC	2 cut(s)	826, 987
BmiI	GGNNCC	3 cut(s)	819, 828, 939
BmrFI	CCNGG	6 cut(s)	79, 441, 442, 458, 841, 942
BmsI	GCATC	3 cut(s)	567, 939, 1072
BmtI	GCTAGC	2 cut(s)	875, 1107
BpiI	GAAGAC	1 cut(s)	226
Bpu14I	TTCGAA	2 cut(s)	678, 1148
BpuMI	CCSGG	5 cut(s)	79, 441, 442, 458, 841
Bsa29I	ATCGAT	1 cut(s)	588
BsaHI	GRCGYC	1 cut(s)	1044
BsaI	GGTCTC	1 cut(s)	706
BsaJI	CCNNGG	5 cut(s)	440, 441, 456, 489, 941
BsaWI	WCCGGW	2 cut(s)	17, 1009
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 300, 330
Bsc4I	CCNNNNNNNGG	2 cut(s)	839, 1120
Bse118I	RCCGGY	2 cut(s)	17, 1085
Bse1I	ACTGG	1 cut(s)	1062
BseAI	TCCGGA	1 cut(s)	1009
BseBI	CCWGG	1 cut(s)	942
BseCI	ATCGAT	1 cut(s)	588
BseDI	CCNNGG	5 cut(s)	440, 441, 456, 489, 941
BseGI	GGATG	3 cut(s)	92, 369, 1087
BseLI	CCNNNNNNNGG	2 cut(s)	839, 1120
BseNI	ACTGG	1 cut(s)	1062
BseRI	GAGGAG	8 cut(s)	305, 344, 475, 557, 717, 720, 944, 1028
BseX3I	CGGCCG	1 cut(s)	803
BseXI	GCAGC	2 cut(s)	190, 1005
Bsh1236I	CGCG	2 cut(s)	515, 1138
Bsh1285I	CGRYCG	2 cut(s)	762, 806
BshFI	GGCC	4 cut(s)	805, 827, 1195, 1225
BshTI	ACCGGT	1 cut(s)	17
BshVI	ATCGAT	1 cut(s)	588
BsiEI	CGRYCG	2 cut(s)	762, 806
BsiHKAI	GWGCWC	2 cut(s)	498, 1113
BsiHKCI	CYCGRG	2 cut(s)	440, 683
BsiSI	CCGG	8 cut(s)	18, 79, 441, 458, 815, 840, 1010, 1086
BsiWI	CGTACG	1 cut(s)	1133
BslI	CCNNNNNNNGG	2 cut(s)	839, 1120
BsmAI	GTCTC	2 cut(s)	706, 1051
BsmBI	CGTCTC	1 cut(s)	1051
BsnI	GGCC	4 cut(s)	805, 827, 1195, 1225
Bso31I	GGTCTC	1 cut(s)	706
BsoBI	CYCGRG	2 cut(s)	440, 683
Bsp119I	TTCGAA	2 cut(s)	678, 1148
Bsp1286I	GDGCHC	2 cut(s)	498, 1113
Bsp13I	TCCGGA	1 cut(s)	1009
Bsp143I	GATC	2 cut(s)	1155, 1186
Bsp19I	CCATGG	1 cut(s)	489
BspANI	GGCC	4 cut(s)	805, 827, 1195, 1225
BspDI	ATCGAT	1 cut(s)	588
BspEI	TCCGGA	1 cut(s)	1009
BspFNI	CGCG	2 cut(s)	515, 1138
BspLI	GGNNCC	3 cut(s)	819, 828, 939
BspMAI	CTGCAG	1 cut(s)	1023
BspOI	GCTAGC	2 cut(s)	875, 1107
BspT104I	TTCGAA	2 cut(s)	678, 1148
BspTNI	GGTCTC	1 cut(s)	706
BsrFI	RCCGGY	2 cut(s)	17, 1085
BsrI	ACTGG	1 cut(s)	1062
BssAI	RCCGGY	2 cut(s)	17, 1085
BssECI	CCNNGG	5 cut(s)	440, 441, 456, 489, 941
BssMI	GATC	2 cut(s)	1155, 1186
BssNI	GRCGYC	1 cut(s)	1044
BssT1I	CCWWGG	1 cut(s)	489
Bst2UI	CCWGG	1 cut(s)	942
Bst4CI	ACNGT	2 cut(s)	717, 763
Bst6I	CTCTTC	2 cut(s)	694, 911
BstACI	GRCGYC	1 cut(s)	1044
BstBI	TTCGAA	2 cut(s)	678, 1148
BstC8I	GCNNGC	4 cut(s)	873, 894, 1105, 1109
BstDSI	CCRYGG	1 cut(s)	489
BstF5I	GGATG	3 cut(s)	92, 369, 1087
BstFNI	CGCG	2 cut(s)	515, 1138
BstH2I	RGCGCY	1 cut(s)	1032
BstHHI	GCGC	3 cut(s)	1031, 1063, 1140
BstKTI	GATC	2 cut(s)	1158, 1189
BstMAI	GTCTC	2 cut(s)	706, 1051
BstMBI	GATC	2 cut(s)	1155, 1186
BstMCI	CGRYCG	2 cut(s)	762, 806
BstMWI	GCNNNNNNNGC	4 cut(s)	824, 1058, 1113, 1135
BstNI	CCWGG	1 cut(s)	942
BstSCI	CCNGG	6 cut(s)	77, 439, 440, 456, 839, 940
BstSFI	CTRYAG	1 cut(s)	1019
BstUI	CGCG	2 cut(s)	515, 1138
BstV1I	GCAGC	2 cut(s)	190, 1005
BstV2I	GAAGAC	1 cut(s)	226
BstZI	CGGCCG	1 cut(s)	803
Bsu15I	ATCGAT	1 cut(s)	588
BsuRI	GGCC	4 cut(s)	805, 827, 1195, 1225
BsuTUI	ATCGAT	1 cut(s)	588
BtgI	CCRYGG	1 cut(s)	489
BtgZI	GCGATG	1 cut(s)	516
BtsCI	GGATG	3 cut(s)	92, 369, 1087
BtsI	GCAGTG	2 cut(s)	216, 619
BtsIMutI	CAGTG	2 cut(s)	216, 619
Cac8I	GCNNGC	4 cut(s)	873, 894, 1105, 1109
CfoI	GCGC	3 cut(s)	1031, 1063, 1140
Cfr10I	RCCGGY	2 cut(s)	17, 1085
Cfr13I	GGNCC	2 cut(s)	826, 987
Cfr9I	CCCGGG	1 cut(s)	440
ClaI	ATCGAT	1 cut(s)	588
CseI	GACGC	2 cut(s)	521, 987
Csp6I	GTAC	1 cut(s)	1134
CspAI	ACCGGT	1 cut(s)	17
CviAII	CATG	3 cut(s)	490, 562, 580
CviQI	GTAC	1 cut(s)	1134
DpnI	GATC	2 cut(s)	1157, 1188
DpnII	GATC	2 cut(s)	1155, 1186
DriI	GACNNNNNGTC	1 cut(s)	997
EaeI	YGGCCR	2 cut(s)	803, 1193
EagI	CGGCCG	1 cut(s)	803
Eam1104I	CTCTTC	2 cut(s)	694, 911
Eam1105I	GACNNNNNGTC	1 cut(s)	997
EarI	CTCTTC	2 cut(s)	694, 911
EciI	GGCGGA	3 cut(s)	39, 331, 911
Ecl136II	GAGCTC	1 cut(s)	496
EclXI	CGGCCG	1 cut(s)	803
Eco130I	CCWWGG	1 cut(s)	489
Eco24I	GRGCYC	1 cut(s)	498
Eco31I	GGTCTC	1 cut(s)	706
Eco47I	GGWCC	1 cut(s)	987
Eco52I	CGGCCG	1 cut(s)	803
Eco53kI	GAGCTC	1 cut(s)	496
Eco57I	CTGAAG	2 cut(s)	929, 974
Eco88I	CYCGRG	2 cut(s)	440, 683
EcoICRI	GAGCTC	1 cut(s)	496
EcoRII	CCWGG	1 cut(s)	940
EcoT14I	CCWWGG	1 cut(s)	489
EcoT22I	ATGCAT	1 cut(s)	40
EcoT38I	GRGCYC	1 cut(s)	498
ErhI	CCWWGG	1 cut(s)	489
Esp3I	CGTCTC	1 cut(s)	1051
FaeI	CATG	3 cut(s)	493, 565, 583
FaiI	YATR	8 cut(s)	36, 53, 491, 524, 563, 581, 642, 1264
FatI	CATG	3 cut(s)	489, 561, 579
FauI	CCCGC	2 cut(s)	167, 662
FblI	GTMKAC	1 cut(s)	729
Fnu4HI	GCNGC	5 cut(s)	201, 204, 905, 1019, 1027
FokI	GGATG	3 cut(s)	79, 356, 1094
FriOI	GRGCYC	1 cut(s)	498
Fsp4HI	GCNGC	5 cut(s)	201, 204, 905, 1019, 1027
FspBI	CTAG	3 cut(s)	872, 1104, 1233
GlaI	GCGC	3 cut(s)	1030, 1062, 1139
GluI	GCNGC	5 cut(s)	201, 204, 905, 1019, 1027
HaeII	RGCGCY	1 cut(s)	1032
HaeIII	GGCC	4 cut(s)	805, 827, 1195, 1225
HapII	CCGG	8 cut(s)	18, 79, 441, 458, 815, 840, 1010, 1086
HgaI	GACGC	2 cut(s)	521, 987
HhaI	GCGC	3 cut(s)	1031, 1063, 1140
Hin1I	GRCGYC	1 cut(s)	1044
Hin1II	CATG	3 cut(s)	493, 565, 583
Hin6I	GCGC	3 cut(s)	1029, 1061, 1138
HinP1I	GCGC	3 cut(s)	1029, 1061, 1138
HincII	GTYRAC	1 cut(s)	730
HindII	GTYRAC	1 cut(s)	730
HpaII	CCGG	8 cut(s)	18, 79, 441, 458, 815, 840, 1010, 1086
HphI	GGTGA	2 cut(s)	90, 472
Hpy166II	GTNNAC	2 cut(s)	606, 730
Hpy188I	TCNGA	9 cut(s)	118, 307, 326, 374, 692, 698, 924, 937, 991
Hpy188III	TCNNGA	3 cut(s)	390, 757, 1010
Hpy8I	GTNNAC	2 cut(s)	606, 730
HpyAV	CCTTC	8 cut(s)	75, 111, 298, 843, 904, 919, 1198, 1215
HpyCH4III	ACNGT	2 cut(s)	717, 763
HpyCH4IV	ACGT	4 cut(s)	231, 972, 1044, 1132
HpyCH4V	TGCA	4 cut(s)	38, 206, 432, 1021
HpyF10VI	GCNNNNNNNGC	4 cut(s)	824, 1058, 1113, 1135
HpySE526I	ACGT	4 cut(s)	231, 972, 1044, 1132
Hsp92I	GRCGYC	1 cut(s)	1044
Hsp92II	CATG	3 cut(s)	493, 565, 583
HspAI	GCGC	3 cut(s)	1029, 1061, 1138
Kpn2I	TCCGGA	1 cut(s)	1009
Kzo9I	GATC	2 cut(s)	1155, 1186
LmnI	GCTCC	6 cut(s)	318, 493, 823, 937, 1015, 1116
Lsp1109I	GCAGC	2 cut(s)	190, 1005
LweI	GCATC	3 cut(s)	567, 939, 1072
MaeI	CTAG	3 cut(s)	872, 1104, 1233
MaeII	ACGT	4 cut(s)	231, 972, 1044, 1132
MaeIII	GTNAC	1 cut(s)	614
MalI	GATC	2 cut(s)	1157, 1188
MboI	GATC	2 cut(s)	1155, 1186
MhlI	GDGCHC	2 cut(s)	498, 1113
MlyI	GAGTC	7 cut(s)	278, 321, 611, 626, 893, 928, 941
MmeI	TCCRAC	2 cut(s)	915, 1014
Mph1103I	ATGCAT	1 cut(s)	40
MroI	TCCGGA	1 cut(s)	1009
MslI	CAYNNNNRTG	1 cut(s)	578
MspA1I	CMGCKG	2 cut(s)	203, 907
MspI	CCGG	8 cut(s)	18, 79, 441, 458, 815, 840, 1010, 1086
MspR9I	CCNGG	6 cut(s)	79, 441, 442, 458, 841, 942
MvaI	CCWGG	1 cut(s)	942
MvnI	CGCG	2 cut(s)	515, 1138
MwoI	GCNNNNNNNGC	4 cut(s)	824, 1058, 1113, 1135
NciI	CCSGG	5 cut(s)	79, 441, 442, 458, 841
NcoI	CCATGG	1 cut(s)	489
NdeII	GATC	2 cut(s)	1155, 1186
NheI	GCTAGC	2 cut(s)	871, 1103
NlaIII	CATG	3 cut(s)	493, 565, 583
NlaIV	GGNNCC	3 cut(s)	819, 828, 939
NmeAIII	GCCGAG	1 cut(s)	781
NmuCI	GTSAC	1 cut(s)	614
NsiI	ATGCAT	1 cut(s)	40
NspV	TTCGAA	2 cut(s)	678, 1148
PcsI	WCGNNNNNNNCGW	1 cut(s)	594
PfeI	GAWTC	6 cut(s)	119, 393, 518, 590, 693, 789
Pfl23II	CGTACG	1 cut(s)	1133
PflFI	GACNNNGTC	1 cut(s)	53
PinAI	ACCGGT	1 cut(s)	17
PkrI	GCNGC	5 cut(s)	202, 205, 906, 1020, 1028
PleI	GAGTC	7 cut(s)	278, 321, 610, 626, 892, 927, 940
PpsI	GAGTC	7 cut(s)	278, 321, 610, 626, 892, 927, 940
Psp124BI	GAGCTC	1 cut(s)	498
Psp6I	CCWGG	1 cut(s)	940
PspGI	CCWGG	1 cut(s)	940
PspLI	CGTACG	1 cut(s)	1133
PspN4I	GGNNCC	3 cut(s)	819, 828, 939
PspPI	GGNCC	2 cut(s)	826, 987
PstI	CTGCAG	1 cut(s)	1023
PsyI	GACNNNGTC	1 cut(s)	53
RsaI	GTAC	1 cut(s)	1135
RsaNI	GTAC	1 cut(s)	1134
RseI	CAYNNNNRTG	1 cut(s)	578
SacI	GAGCTC	1 cut(s)	498
SalI	GTCGAC	1 cut(s)	728
SatI	GCNGC	5 cut(s)	201, 204, 905, 1019, 1027
Sau3AI	GATC	2 cut(s)	1155, 1186
Sau96I	GGNCC	2 cut(s)	826, 987
SchI	GAGTC	7 cut(s)	278, 321, 611, 626, 893, 928, 941
ScrFI	CCNGG	6 cut(s)	79, 441, 442, 458, 841, 942
SduI	GDGCHC	2 cut(s)	498, 1113
SfaNI	GCATC	3 cut(s)	567, 939, 1072
SfcI	CTRYAG	1 cut(s)	1019
SfuI	TTCGAA	2 cut(s)	678, 1148
SinI	GGWCC	1 cut(s)	987
SmaI	CCCGGG	1 cut(s)	442
SmiMI	CAYNNNNRTG	1 cut(s)	578
SspMI	CTAG	3 cut(s)	872, 1104, 1233
SstI	GAGCTC	1 cut(s)	498
StyD4I	CCNGG	6 cut(s)	77, 439, 440, 456, 839, 940
StyI	CCWWGG	1 cut(s)	489
TaaI	ACNGT	2 cut(s)	717, 763
TaiI	ACGT	4 cut(s)	234, 975, 1047, 1135
TauI	GCSGC	3 cut(s)	203, 907, 1029
TfiI	GAWTC	6 cut(s)	119, 393, 518, 590, 693, 789
TscAI	CASTG	2 cut(s)	223, 619
TseFI	GTSAC	1 cut(s)	614
TseI	GCWGC	2 cut(s)	203, 1018
Tsp45I	GTSAC	1 cut(s)	614
TspDTI	ATGAA	4 cut(s)	210, 405, 596, 1217
TspGWI	ACGGA	4 cut(s)	583, 644, 810, 1094
TspMI	CCCGGG	1 cut(s)	440
TspRI	CASTG	2 cut(s)	223, 619
Tth111I	GACNNNGTC	1 cut(s)	53
VpaK11BI	GGWCC	1 cut(s)	987
XapI	RAATTY	2 cut(s)	463, 673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	487
XmaI	CCCGGG	1 cut(s)	440
XmiI	GTMKAC	1 cut(s)	729
XspI	CTAG	3 cut(s)	872, 1104, 1233
ZraI	GACGTC	1 cut(s)	1045
Zsp2I	ATGCAT	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.