Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002359

Physical Location & Seq

Genomic Coordinates Reverse (-)

49892115 .. 49895906

Gene Structure 3792 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009263

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGTCTTCGTGTTTTACCGGTGGCGGAAGAACCTATGCATTTGAGCTTGACATAGTCAAATCCCCTTCCACTTCAACCCGGACTTCACAAACATCCTCACCTTCTTCCACTCTCTCAGAATCAAGCAATTCGGCACTCGCAATCTCCACCCGAAAACCCCGTACCCCTCGAAAACGTCCCAACCAGACTTACAATGAAGCCGCTGCATTACTCTCCACTGCTTACCCCAACGTCTTCTCCACCAAAATCCTCACAAATCCTCGCAAATCCACCAAACCCCACGACTCCTTCCTCGACCAATCTTCCGAATTGCTCCTCCCTTTCAGACTCATCGACAATTCCGCCACTTTCCTCCTCCACAACCCCATCCGAGAAAAACCCAATTCTCGTTTCGAGCCGAAAGCCATCAATTCCTTTGAAAAGTCGTCTTGTAATTCGCCTGGGGAGTTCAATTCCCCGGTGAATTTCGACTCCAATCCCAACTCCTCCATGGAGCTATGCGATGACTTCGACGCGGAATCTATGCTGGACGAGGAAATTGAAGAGGGTATTGATAGTATCATGGGGAGTAGCACCAGCATGAACATCGATTCCGTCGATGAGTCCACTAGTAGTGACCCAATGATGACGAACTCCTGCTATGGCTACCCAATGGGGTTGGGATTTGGCGGGAATTTCGAACTCGGGTTCGGATTCAGAAGAGGAGGAGTGAGACCGTTGAGGCAAGTCGACGATGGAGTGAACTGGTGGAGTTTCCCGACTGTCGATGTTGTTGAAATCTCGCCCAGATTCAACAAATCTCGGCCGTCCGTTCCGGCTCCGTCGTCTGCCGCCGGGAAGAAGAAGAAGAAGAAGATGGAGAAGCTAGCGGTGGTGGAGTCCAAGCTGGCGGAGTTGCCGCTAAAGGAGAAGAGTCCGAACGTCCCGAAGGAGGAGTCGGAGCCTGGGCTGATGCTGAAGCTGGACTACGACGACGTTTTGAGTGCTTGGTCCGACAAAGCGTCGCCGTTTCCGGAGGAGTTGCAGGGCGGCGCTGATGGAAACGACGTCTCTGCCAGACTGGCGCAGATTGATCTATTCACGGACGCCGGTGGTTTGAGAGAGGCTAGCGTGCTCCGCTATAAGGAAAAGCGACGTACGCGCCTCTTTTCGAAGAAGATCAGGTATCAAGTCCGCAAAGTCAATGCCGATCGACGGCCAAGAATGAAGGGTAGATTTGTGAGAAGGCCAAACTCTAGCACAAATGACGGCGCCGTTTTGGGCACCATCGTCGCCTTCGCCGCTGTCGATTCCTTCCTCAGCTTCAAATCCACTTCCTTCGCCCTCCGCAAGATCCGCCAAGCCCTCTCCGTCAAAGTCTCCGATCTCCACTCCCTAATCCACGAAGACTCCAATCAGCCGCAGCAGTCCGATGCCTCCAAGCTCGTCGTCCTCTGTGGCCGCGTCCAAGCCACACCAGACGCCGACGGAATCTACAAGACCCTCAAGTCCAGCCCAATCATCAACCCCGAAACTAATAAGAACAGAACACCACCATCGACGCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0015031 GO:0015833 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT

Protein Analysis

516

Amino Acids

56.69

Weight (kDa)

9.03

Isoelectric Point (pI)

51.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCT	PF06203	367 - 409	3e-17	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25990 AT4G25990 AT4G25990 AT5G57180 AT5G57180 AT5G57180 AT5G57180
fragaria_vesca	FvH4_2g01490 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780
malus_domestica	MD13G1239300.v1.1 MD16G1248400.v1.1
prunus_persica	Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1
pyrus_communis	pycom13g21340 pycom16g20820
rosa_chinensis	RchiOBHm_Chr4g0399481
rosa_laevigata	RLG00000009263
rosa_multiflora	Rmu_sc0002285.1_g000032 Rmu_sc0004311.1_g000007
rosa_roxburghii	Rroxscaffold_5G00344410
rosa_rugosa	Rorug04G0017200 Rorug04G0017300 Rorug04G0017300
rosa_samantha	Rh4AG095100 Rh4BG092500 Rh4CG103600 Rh4DG087400
rosa_wichuraiana	Rw4G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1486
AatII	GACGTC	1 cut(s)	1050
AccB1I	GGYRCC	2 cut(s)	1250, 1262
AccI	GTMKAC	1 cut(s)	729
AccII	CGCG	3 cut(s)	515, 1141, 1443
AccIII	TCCGGA	1 cut(s)	1012
AclWI	GGATC	1 cut(s)	1327
AcoI	YGGCCR	3 cut(s)	803, 1196, 1438
AcsI	RAATTY	2 cut(s)	463, 673
AcuI	CTGAAG	1 cut(s)	977
AcyI	GRCGYC	5 cut(s)	1047, 1086, 1251, 1461, 1541
AfaI	GTAC	2 cut(s)	163, 1138
AfiI	CCNNNNNNNGG	3 cut(s)	931, 1123, 1194
AgeI	ACCGGT	1 cut(s)	17
AgsI	TTSAA	7 cut(s)	75, 419, 451, 542, 776, 793, 1306
AhdI	GACNNNNNGTC	1 cut(s)	1000
AhlI	ACTAGT	1 cut(s)	608
AjnI	CCWGG	2 cut(s)	439, 943
AjuI	GAANNNNNNNTTGG	2 cut(s)	374, 406
AloI	GAACNNNNNNTCC	2 cut(s)	575, 607
AluBI	AGCT	7 cut(s)	46, 496, 865, 886, 961, 1302, 1423
AluI	AGCT	7 cut(s)	46, 496, 865, 886, 961, 1302, 1423
Alw21I	GWGCWC	1 cut(s)	1116
Alw26I	GTCTC	3 cut(s)	706, 1054, 1363
AlwI	GGATC	1 cut(s)	1327
Ama87I	CYCGRG	1 cut(s)	683
Aor13HI	TCCGGA	1 cut(s)	1012
AoxI	GGCC	4 cut(s)	803, 1196, 1226, 1438
ApeKI	GCWGC	2 cut(s)	203, 1402
ApoI	RAATTY	2 cut(s)	463, 673
ArsI	GACNNNNNNTTYG	2 cut(s)	920, 952
AsiGI	ACCGGT	1 cut(s)	17
AspLEI	GCGC	4 cut(s)	1034, 1066, 1143, 1253
AspS9I	GGNCC	1 cut(s)	990
AsuC2I	CCSGG	3 cut(s)	79, 458, 835
AsuHPI	GGTGA	2 cut(s)	90, 472
AsuII	TTCGAA	2 cut(s)	678, 1151
AsuNHI	GCTAGC	2 cut(s)	865, 1106
AvaI	CYCGRG	1 cut(s)	683
AvaII	GGWCC	1 cut(s)	990
BaeGI	GKGCMC	1 cut(s)	1265
BanI	GGYRCC	2 cut(s)	1250, 1262
BarI	GAAGNNNNNNTAC	2 cut(s)	950, 982
BbsI	GAAGAC	2 cut(s)	226, 1392
Bbv12I	GWGCWC	1 cut(s)	1116
BbvCI	CCTCAGC	1 cut(s)	1298
BbvI	GCAGC	2 cut(s)	190, 1414
BccI	CCATC	7 cut(s)	374, 413, 728, 850, 1031, 1274, 1543
BceAI	ACGGC	6 cut(s)	790, 991, 1211, 1238, 1264, 1528
BcgI	CGANNNNNNTGC	6 cut(s)	568, 602, 1034, 1068, 1252, 1286
BciT130I	CCWGG	2 cut(s)	441, 945
BcnI	CCSGG	3 cut(s)	79, 458, 835
BcoDI	GTCTC	3 cut(s)	706, 1054, 1363
BcuI	ACTAGT	1 cut(s)	608
BfaI	CTAG	4 cut(s)	609, 866, 1107, 1236
BfoI	RGCGCY	2 cut(s)	1035, 1254
BglI	GCCNNNNNGGC	1 cut(s)	1061
BisI	GCNGC	9 cut(s)	201, 204, 831, 899, 1030, 1281, 1400, 1403, 1441
BlsI	GCNGC	9 cut(s)	202, 205, 832, 900, 1031, 1282, 1401, 1404, 1442
Bme1390I	CCNGG	5 cut(s)	79, 441, 458, 835, 945
Bme18I	GGWCC	1 cut(s)	990
BmeRI	GACNNNNNGTC	1 cut(s)	1000
BmeT110I	CYCGRG	1 cut(s)	683
BmgT120I	GGNCC	1 cut(s)	990
BmiI	GGNNCC	4 cut(s)	819, 942, 1252, 1264
BmrFI	CCNGG	5 cut(s)	79, 441, 458, 835, 945
BmsI	GCATC	2 cut(s)	942, 1402
BmtI	GCTAGC	2 cut(s)	869, 1110
BpiI	GAAGAC	2 cut(s)	226, 1392
Bpu10I	CCTNAGC	1 cut(s)	1298
Bpu14I	TTCGAA	2 cut(s)	678, 1151
BpuEI	CTTGAG	1 cut(s)	1469
BpuMI	CCSGG	3 cut(s)	79, 458, 835
Bsa29I	ATCGAT	1 cut(s)	588
BsaHI	GRCGYC	5 cut(s)	1047, 1086, 1251, 1461, 1541
BsaI	GGTCTC	1 cut(s)	706
BsaJI	CCNNGG	4 cut(s)	440, 456, 489, 944
BsaWI	WCCGGW	2 cut(s)	17, 1012
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 1373, 1403
Bsc4I	CCNNNNNNNGG	3 cut(s)	931, 1123, 1194
Bse118I	RCCGGY	2 cut(s)	17, 1088
Bse1I	ACTGG	2 cut(s)	749, 1065
BseAI	TCCGGA	1 cut(s)	1012
BseBI	CCWGG	2 cut(s)	441, 945
BseCI	ATCGAT	1 cut(s)	588
BseDI	CCNNGG	4 cut(s)	440, 456, 489, 944
BseGI	GGATG	2 cut(s)	92, 366
BseLI	CCNNNNNNNGG	3 cut(s)	931, 1123, 1194
BseMII	CTCAG	2 cut(s)	129, 1312
BseNI	ACTGG	2 cut(s)	749, 1065
BseRI	GAGGAG	7 cut(s)	305, 344, 475, 717, 720, 947, 1031
BseSI	GKGCMC	1 cut(s)	1265
BseX3I	CGGCCG	1 cut(s)	803
BseXI	GCAGC	2 cut(s)	190, 1414
Bsh1236I	CGCG	3 cut(s)	515, 1141, 1443
Bsh1285I	CGRYCG	2 cut(s)	806, 1192
BshFI	GGCC	4 cut(s)	805, 1198, 1228, 1440
BshNI	GGYRCC	2 cut(s)	1250, 1262
BshTI	ACCGGT	1 cut(s)	17
BshVI	ATCGAT	1 cut(s)	588
BsiEI	CGRYCG	2 cut(s)	806, 1192
BsiHKAI	GWGCWC	1 cut(s)	1116
BsiHKCI	CYCGRG	1 cut(s)	683
BsiSI	CCGG	7 cut(s)	18, 79, 458, 815, 834, 1013, 1089
BsiWI	CGTACG	1 cut(s)	1136
BslFI	GGGAC	2 cut(s)	162, 908
BslI	CCNNNNNNNGG	3 cut(s)	931, 1123, 1194
BsmAI	GTCTC	3 cut(s)	706, 1054, 1363
BsmBI	CGTCTC	1 cut(s)	1054
BsmFI	GGGAC	2 cut(s)	162, 908
BsnI	GGCC	4 cut(s)	805, 1198, 1228, 1440
Bso31I	GGTCTC	1 cut(s)	706
BsoBI	CYCGRG	1 cut(s)	683
Bsp119I	TTCGAA	2 cut(s)	678, 1151
Bsp1286I	GDGCHC	2 cut(s)	1116, 1265
Bsp13I	TCCGGA	1 cut(s)	1012
Bsp143I	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
Bsp19I	CCATGG	1 cut(s)	489
BspANI	GGCC	4 cut(s)	805, 1198, 1228, 1440
BspCNI	CTCAG	2 cut(s)	128, 1311
BspDI	ATCGAT	1 cut(s)	588
BspEI	TCCGGA	1 cut(s)	1012
BspFNI	CGCG	3 cut(s)	515, 1141, 1443
BspLI	GGNNCC	4 cut(s)	819, 942, 1252, 1264
BspOI	GCTAGC	2 cut(s)	869, 1110
BspPI	GGATC	1 cut(s)	1327
BspT104I	TTCGAA	2 cut(s)	678, 1151
BspT107I	GGYRCC	2 cut(s)	1250, 1262
BspTNI	GGTCTC	1 cut(s)	706
BsrFI	RCCGGY	2 cut(s)	17, 1088
BsrI	ACTGG	2 cut(s)	749, 1065
BssAI	RCCGGY	2 cut(s)	17, 1088
BssECI	CCNNGG	4 cut(s)	440, 456, 489, 944
BssMI	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
BssNI	GRCGYC	5 cut(s)	1047, 1086, 1251, 1461, 1541
BssT1I	CCWWGG	1 cut(s)	489
Bst2UI	CCWGG	2 cut(s)	441, 945
Bst4CI	ACNGT	2 cut(s)	717, 763
Bst6I	CTCTTC	3 cut(s)	537, 694, 905
BstACI	GRCGYC	5 cut(s)	1047, 1086, 1251, 1461, 1541
BstBI	TTCGAA	2 cut(s)	678, 1151
BstC8I	GCNNGC	4 cut(s)	867, 888, 1108, 1112
BstDEI	CTNAG	2 cut(s)	115, 1298
BstDSI	CCRYGG	1 cut(s)	489
BstF5I	GGATG	2 cut(s)	92, 366
BstFNI	CGCG	3 cut(s)	515, 1141, 1443
BstH2I	RGCGCY	2 cut(s)	1035, 1254
BstHHI	GCGC	4 cut(s)	1034, 1066, 1143, 1253
BstKTI	GATC	5 cut(s)	1075, 1161, 1192, 1335, 1366
BstMAI	GTCTC	3 cut(s)	706, 1054, 1363
BstMBI	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
BstMCI	CGRYCG	2 cut(s)	806, 1192
BstMWI	GCNNNNNNNGC	5 cut(s)	1061, 1116, 1138, 1280, 1335
BstNI	CCWGG	2 cut(s)	441, 945
BstSCI	CCNGG	5 cut(s)	77, 439, 456, 833, 943
BstSLI	GKGCMC	1 cut(s)	1265
BstUI	CGCG	3 cut(s)	515, 1141, 1443
BstV1I	GCAGC	2 cut(s)	190, 1414
BstV2I	GAAGAC	2 cut(s)	226, 1392
BstX2I	RGATCY	1 cut(s)	1332
BstYI	RGATCY	1 cut(s)	1332
BstZI	CGGCCG	1 cut(s)	803
Bsu15I	ATCGAT	1 cut(s)	588
BsuRI	GGCC	4 cut(s)	805, 1198, 1228, 1440
BsuTUI	ATCGAT	1 cut(s)	588
BtgI	CCRYGG	1 cut(s)	489
BtgZI	GCGATG	1 cut(s)	516
BtsCI	GGATG	2 cut(s)	92, 366
BtsI	GCAGTG	1 cut(s)	216
BtsIMutI	CAGTG	1 cut(s)	216
Cac8I	GCNNGC	4 cut(s)	867, 888, 1108, 1112
CfoI	GCGC	4 cut(s)	1034, 1066, 1143, 1253
Cfr10I	RCCGGY	2 cut(s)	17, 1088
Cfr13I	GGNCC	1 cut(s)	990
ClaI	ATCGAT	1 cut(s)	588
CseI	GACGC	5 cut(s)	521, 990, 1094, 1432, 1469
Csp6I	GTAC	2 cut(s)	162, 1137
CspAI	ACCGGT	1 cut(s)	17
CviAII	CATG	3 cut(s)	490, 562, 580
CviQI	GTAC	2 cut(s)	162, 1137
DdeI	CTNAG	2 cut(s)	115, 1298
DinI	GGCGCC	1 cut(s)	1252
DpnI	GATC	5 cut(s)	1074, 1160, 1191, 1334, 1365
DpnII	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
DrdI	GACNNNNNNGTC	1 cut(s)	1486
DriI	GACNNNNNGTC	1 cut(s)	1000
DseDI	GACNNNNNNGTC	1 cut(s)	1486
EaeI	YGGCCR	3 cut(s)	803, 1196, 1438
EagI	CGGCCG	1 cut(s)	803
Eam1104I	CTCTTC	3 cut(s)	537, 694, 905
Eam1105I	GACNNNNNGTC	1 cut(s)	1000
EarI	CTCTTC	3 cut(s)	537, 694, 905
EciI	GGCGGA	4 cut(s)	39, 331, 905, 1325
EclXI	CGGCCG	1 cut(s)	803
Eco130I	CCWWGG	1 cut(s)	489
Eco31I	GGTCTC	1 cut(s)	706
Eco47I	GGWCC	1 cut(s)	990
Eco52I	CGGCCG	1 cut(s)	803
Eco57I	CTGAAG	1 cut(s)	977
Eco88I	CYCGRG	1 cut(s)	683
EcoRII	CCWGG	2 cut(s)	439, 943
EcoT14I	CCWWGG	1 cut(s)	489
EcoT22I	ATGCAT	1 cut(s)	40
EgeI	GGCGCC	1 cut(s)	1252
EheI	GGCGCC	1 cut(s)	1252
ErhI	CCWWGG	1 cut(s)	489
Esp3I	CGTCTC	1 cut(s)	1054
FaeI	CATG	3 cut(s)	493, 565, 583
FaiI	YATR	9 cut(s)	36, 53, 491, 499, 524, 563, 581, 642, 1122
FaqI	GGGAC	2 cut(s)	162, 908
FatI	CATG	3 cut(s)	489, 561, 579
FauI	CCCGC	1 cut(s)	662
FblI	GTMKAC	1 cut(s)	729
Fnu4HI	GCNGC	9 cut(s)	201, 204, 831, 899, 1030, 1281, 1400, 1403, 1441
FokI	GGATG	2 cut(s)	79, 353
Fsp4HI	GCNGC	9 cut(s)	201, 204, 831, 899, 1030, 1281, 1400, 1403, 1441
FspBI	CTAG	4 cut(s)	609, 866, 1107, 1236
GlaI	GCGC	4 cut(s)	1033, 1065, 1142, 1252
GluI	GCNGC	9 cut(s)	201, 204, 831, 899, 1030, 1281, 1400, 1403, 1441
HaeII	RGCGCY	2 cut(s)	1035, 1254
HaeIII	GGCC	4 cut(s)	805, 1198, 1228, 1440
HapII	CCGG	7 cut(s)	18, 79, 458, 815, 834, 1013, 1089
HgaI	GACGC	5 cut(s)	521, 990, 1094, 1432, 1469
HhaI	GCGC	4 cut(s)	1034, 1066, 1143, 1253
Hin1I	GRCGYC	5 cut(s)	1047, 1086, 1251, 1461, 1541
Hin1II	CATG	3 cut(s)	493, 565, 583
Hin6I	GCGC	4 cut(s)	1032, 1064, 1141, 1251
HinP1I	GCGC	4 cut(s)	1032, 1064, 1141, 1251
HincII	GTYRAC	1 cut(s)	730
HindII	GTYRAC	1 cut(s)	730
HpaII	CCGG	7 cut(s)	18, 79, 458, 815, 834, 1013, 1089
HphI	GGTGA	2 cut(s)	90, 472
Hpy166II	GTNNAC	3 cut(s)	606, 730, 742
Hpy188III	TCNNGA	3 cut(s)	757, 925, 1013
Hpy8I	GTNNAC	3 cut(s)	606, 730, 742
HpyAV	CCTTC	9 cut(s)	75, 111, 298, 922, 1201, 1218, 1285, 1303, 1327
HpyCH4III	ACNGT	2 cut(s)	717, 763
HpyCH4IV	ACGT	6 cut(s)	175, 231, 921, 975, 1047, 1135
HpyCH4V	TGCA	3 cut(s)	38, 206, 1024
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1061, 1116, 1138, 1280, 1335
HpyF3I	CTNAG	2 cut(s)	115, 1298
HpySE526I	ACGT	6 cut(s)	175, 231, 921, 975, 1047, 1135
Hsp92I	GRCGYC	5 cut(s)	1047, 1086, 1251, 1461, 1541
Hsp92II	CATG	3 cut(s)	493, 565, 583
HspAI	GCGC	4 cut(s)	1032, 1064, 1141, 1251
KasI	GGCGCC	1 cut(s)	1250
Kpn2I	TCCGGA	1 cut(s)	1012
Kzo9I	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
LmnI	GCTCC	5 cut(s)	318, 493, 823, 940, 1119
Lsp1109I	GCAGC	2 cut(s)	190, 1414
LweI	GCATC	2 cut(s)	942, 1402
MaeI	CTAG	4 cut(s)	609, 866, 1107, 1236
MaeII	ACGT	6 cut(s)	175, 231, 921, 975, 1047, 1135
MaeIII	GTNAC	1 cut(s)	614
MalI	GATC	5 cut(s)	1074, 1160, 1191, 1334, 1365
MboI	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
MflI	RGATCY	1 cut(s)	1332
MhlI	GDGCHC	2 cut(s)	1116, 1265
Mly113I	GGCGCC	1 cut(s)	1251
MlyI	GAGTC	8 cut(s)	278, 321, 464, 611, 887, 922, 944, 1382
MmeI	TCCRAC	2 cut(s)	918, 1017
Mph1103I	ATGCAT	1 cut(s)	40
MroI	TCCGGA	1 cut(s)	1012
MslI	CAYNNNNRTG	1 cut(s)	578
MspA1I	CMGCKG	2 cut(s)	203, 1283
MspI	CCGG	7 cut(s)	18, 79, 458, 815, 834, 1013, 1089
MspR9I	CCNGG	5 cut(s)	79, 441, 458, 835, 945
MvaI	CCWGG	2 cut(s)	441, 945
MvnI	CGCG	3 cut(s)	515, 1141, 1443
MwoI	GCNNNNNNNGC	5 cut(s)	1061, 1116, 1138, 1280, 1335
NarI	GGCGCC	1 cut(s)	1251
NciI	CCSGG	3 cut(s)	79, 458, 835
NcoI	CCATGG	1 cut(s)	489
NdeII	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
NheI	GCTAGC	2 cut(s)	865, 1106
NlaIII	CATG	3 cut(s)	493, 565, 583
NlaIV	GGNNCC	4 cut(s)	819, 942, 1252, 1264
NmeAIII	GCCGAG	1 cut(s)	781
NmuCI	GTSAC	1 cut(s)	614
NsiI	ATGCAT	1 cut(s)	40
NspV	TTCGAA	2 cut(s)	678, 1151
PcsI	WCGNNNNNNNCGW	2 cut(s)	594, 1284
PfeI	GAWTC	7 cut(s)	119, 518, 590, 693, 789, 1289, 1470
Pfl23II	CGTACG	1 cut(s)	1136
PflFI	GACNNNGTC	1 cut(s)	53
PinAI	ACCGGT	1 cut(s)	17
PkrI	GCNGC	9 cut(s)	202, 205, 832, 900, 1031, 1282, 1401, 1404, 1442
Ple19I	CGATCG	1 cut(s)	1192
PleI	GAGTC	8 cut(s)	278, 321, 464, 610, 886, 921, 943, 1382
PluTI	GGCGCC	1 cut(s)	1254
PpsI	GAGTC	8 cut(s)	278, 321, 464, 610, 886, 921, 943, 1382
Psp6I	CCWGG	2 cut(s)	439, 943
PspGI	CCWGG	2 cut(s)	439, 943
PspLI	CGTACG	1 cut(s)	1136
PspN4I	GGNNCC	4 cut(s)	819, 942, 1252, 1264
PspPI	GGNCC	1 cut(s)	990
PsuI	RGATCY	1 cut(s)	1332
PsyI	GACNNNGTC	1 cut(s)	53
PvuI	CGATCG	1 cut(s)	1192
RsaI	GTAC	2 cut(s)	163, 1138
RsaNI	GTAC	2 cut(s)	162, 1137
RseI	CAYNNNNRTG	1 cut(s)	578
SalI	GTCGAC	1 cut(s)	728
SatI	GCNGC	9 cut(s)	201, 204, 831, 899, 1030, 1281, 1400, 1403, 1441
Sau3AI	GATC	5 cut(s)	1072, 1158, 1189, 1332, 1363
Sau96I	GGNCC	1 cut(s)	990
SchI	GAGTC	8 cut(s)	278, 321, 464, 611, 887, 922, 944, 1382
ScrFI	CCNGG	5 cut(s)	79, 441, 458, 835, 945
SduI	GDGCHC	2 cut(s)	1116, 1265
SfaNI	GCATC	2 cut(s)	942, 1402
SfoI	GGCGCC	1 cut(s)	1252
SfuI	TTCGAA	2 cut(s)	678, 1151
SgrAI	CRCCGGYG	1 cut(s)	1088
SinI	GGWCC	1 cut(s)	990
SmiMI	CAYNNNNRTG	1 cut(s)	578
SmlI	CTYRAG	1 cut(s)	1484
SmoI	CTYRAG	1 cut(s)	1484
SpeI	ACTAGT	1 cut(s)	608
SspDI	GGCGCC	1 cut(s)	1250
SspMI	CTAG	4 cut(s)	609, 866, 1107, 1236
StyD4I	CCNGG	5 cut(s)	77, 439, 456, 833, 943
StyI	CCWWGG	1 cut(s)	489
TaaI	ACNGT	2 cut(s)	717, 763
TaiI	ACGT	6 cut(s)	178, 234, 924, 978, 1050, 1138
TauI	GCSGC	7 cut(s)	203, 833, 901, 1032, 1283, 1402, 1443
TfiI	GAWTC	7 cut(s)	119, 518, 590, 693, 789, 1289, 1470
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	1 cut(s)	614
TseI	GCWGC	2 cut(s)	203, 1402
Tsp45I	GTSAC	1 cut(s)	614
TspDTI	ATGAA	3 cut(s)	210, 596, 1220
TspGWI	ACGGA	6 cut(s)	583, 799, 810, 1097, 1339, 1482
TspRI	CASTG	1 cut(s)	223
Tth111I	GACNNNGTC	1 cut(s)	53
VpaK11BI	GGWCC	1 cut(s)	990
XapI	RAATTY	2 cut(s)	463, 673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	487
XmiI	GTMKAC	1 cut(s)	729
XspI	CTAG	4 cut(s)	609, 866, 1107, 1236
ZraI	GACGTC	1 cut(s)	1048
Zsp2I	ATGCAT	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.