Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002285.1

Orthogroup ID

OG0002359

Physical Location & Seq

Genomic Coordinates Forward (+)

130856 .. 135985

Gene Structure 5130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002285.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

atgtcttcgtgttttaccggtggcggaagaacctatgcatttgagcttgacatagtcaaatccccttccacttcaacccggacttcacaaacatcctcaccttcttccactctctcggaatcaagcaattcggcactcgcaatctccacccgaaaaccccgcacccctcgaaaacgccccaaccagacttacaatgaagccgctgcattactctccactgcttaccccaacgtcttctccaccaaaatcctcacaaatgcaaatcctcgcaaatccaccaaaccccacgactccttcctcgacccatcttccgaactgctcctccctttcagactcatcgacaactccgccactttcctcctccacaacccccccatccgacaaaaacccaactctcgattcgagccgaaagccatcaattcatttgataagtcttgtaattcgcccggggagttcaattccccggtgaatttcgaccccactcccaactcctccatggagctctgcgatgacttcgacgcggaatctatgctggacgaggaaattgaggagggtattgatagcatcatggggagtagcaccagcatgaacatcgattccgtcgatgactccaccagcagtgacccaatgatgacggactcctgctatggctacccaatggggttgggatttggcgggaatttcgaactcgggttcggtttcagaagaggaggagtgagaccgttgaggcaagtcgacgatggagtgaattggtggagtttcccgaccgtcgatgttgttgaaatctcgcccagattcaacaaatctcgcccgtccgttccggctccgtcggccccaccttctgccgggaagaaaaagaagaagaagatggagaagctagcggtggtggagtccaagctggcggagttgccgctaaaggagaagagtccgaatccgaatccgaaggaggagtcggagcccgggctgatgctgaagctggactacgacgacgttttgagtgcttggtccgacaaagcgtcgccgtttccggaggagctgcagggcggcgctgatggaaacgacgtctctgccagactggcgcagattgatttattcacggacgccggtggtttgagagaggctagcgtgctccgctacaaggaaaagcgacgtacgcgcctcttttcgaagaagatcaggtatcaagtccgcaaagtcaatgccgatcgacggccaagaatgaagggtagatttgtgagaaggccaaactctagcacaaatgtgtcagtgttggctctgactcgccgacgttgtgacgctgccggacgggtattgatggttatggtcctgttggctttgaggctggctatactcgggcttgccagtgccggtcgcggtgatggcgtcttcagaggggtttccggtggcggcttgaaggttgggatctatcggttggacccaagtgaccaagtctggctgttttggtgtcttctctgtggcggtggcatcgcggtggtggtgatcttccttgatgcgggcggcagtccctcaatcacggtgagtcgtggtggtgggatcgtcgttgtgtgcatgtggcaggtgcacagggaagtgaaggctgggctgggcatggccaggctggtttgggccttgtatattgctttcttttgggccagttggactgttgcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0015031 GO:0015833 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT

Protein Analysis

556

Amino Acids

60.84

Weight (kDa)

9.29

Isoelectric Point (pI)

50.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25990 AT4G25990 AT4G25990 AT5G57180 AT5G57180 AT5G57180 AT5G57180
fragaria_vesca	FvH4_2g01490 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780
malus_domestica	MD13G1239300.v1.1 MD16G1248400.v1.1
prunus_persica	Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1
pyrus_communis	pycom13g21340 pycom16g20820
rosa_chinensis	RchiOBHm_Chr4g0399481
rosa_laevigata	RLG00000009263
rosa_multiflora	Rmu_sc0002285.1_g000032 Rmu_sc0004311.1_g000007
rosa_roxburghii	Rroxscaffold_5G00344410
rosa_rugosa	Rorug04G0017200 Rorug04G0017300 Rorug04G0017300
rosa_samantha	Rh4AG095100 Rh4BG092500 Rh4CG103600 Rh4DG087400
rosa_wichuraiana	Rw4G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1567
AatII	GACGTC	1 cut(s)	1065
Acc36I	ACCTGC	1 cut(s)	1567
AccI	GTMKAC	1 cut(s)	735
AccII	CGCG	4 cut(s)	521, 1156, 1374, 1490
AccIII	TCCGGA	1 cut(s)	1027
AclWI	GGATC	2 cut(s)	1430, 1562
AcoI	YGGCCR	2 cut(s)	1211, 1611
AcsI	RAATTY	2 cut(s)	469, 679
AcuI	CTGAAG	2 cut(s)	992, 1372
AcyI	GRCGYC	3 cut(s)	1062, 1101, 1383
AfaI	GTAC	1 cut(s)	1153
AfiI	CCNNNNNNNGG	4 cut(s)	845, 1138, 1209, 1513
AgeI	ACCGGT	1 cut(s)	17
AgsI	TTSAA	5 cut(s)	75, 457, 782, 799, 1414
AhdI	GACNNNNNGTC	1 cut(s)	1015
AjnI	CCWGG	1 cut(s)	1613
AjuI	GAANNNNNNNTTGG	2 cut(s)	383, 415
AleI	CACNNNNGTG	1 cut(s)	1259
AloI	GAACNNNNNNTCC	4 cut(s)	306, 338, 581, 613
AluBI	AGCT	6 cut(s)	46, 502, 877, 898, 976, 1036
AluI	AGCT	6 cut(s)	46, 502, 877, 898, 976, 1036
Alw21I	GWGCWC	3 cut(s)	504, 1131, 1584
Alw26I	GTCTC	2 cut(s)	712, 1069
Alw44I	GTGCAC	1 cut(s)	1580
AlwI	GGATC	2 cut(s)	1430, 1562
Ama87I	CYCGRG	4 cut(s)	446, 689, 959, 1352
Aor13HI	TCCGGA	1 cut(s)	1027
AoxI	GGCC	6 cut(s)	831, 1211, 1241, 1611, 1626, 1650
ApaLI	GTGCAC	1 cut(s)	1580
ApeKI	GCWGC	3 cut(s)	203, 1036, 1298
ApoI	RAATTY	2 cut(s)	469, 679
ArsI	GACNNNNNNTTYG	2 cut(s)	935, 967
AsiGI	ACCGGT	1 cut(s)	17
AspLEI	GCGC	3 cut(s)	1049, 1081, 1158
AspS9I	GGNCC	6 cut(s)	832, 1005, 1324, 1435, 1626, 1650
AsuC2I	CCSGG	7 cut(s)	79, 447, 448, 464, 847, 960, 961
AsuHPI	GGTGA	5 cut(s)	90, 478, 1388, 1510, 1549
AsuII	TTCGAA	2 cut(s)	684, 1166
AsuNHI	GCTAGC	2 cut(s)	877, 1121
AvaI	CYCGRG	4 cut(s)	446, 689, 959, 1352
AvaII	GGWCC	3 cut(s)	1005, 1324, 1435
BaeGI	GKGCMC	1 cut(s)	1584
BalI	TGGCCA	1 cut(s)	1613
BanII	GRGCYC	2 cut(s)	504, 960
BarI	GAAGNNNNNNTAC	2 cut(s)	965, 997
BbsI	GAAGAC	3 cut(s)	226, 1378, 1460
Bbv12I	GWGCWC	3 cut(s)	504, 1131, 1584
BbvI	GCAGC	3 cut(s)	190, 1023, 1285
BccI	CCATC	8 cut(s)	313, 383, 422, 734, 862, 1046, 1309, 1373
BceAI	ACGGC	2 cut(s)	1006, 1226
BcgI	CGANNNNNNTGC	4 cut(s)	574, 608, 1049, 1083
BciT130I	CCWGG	1 cut(s)	1615
BcnI	CCSGG	7 cut(s)	79, 447, 448, 464, 847, 960, 961
BcoDI	GTCTC	2 cut(s)	712, 1069
BfaI	CTAG	3 cut(s)	878, 1122, 1251
BfmI	CTRYAG	1 cut(s)	1037
BfoI	RGCGCY	1 cut(s)	1050
BfuAI	ACCTGC	1 cut(s)	1567
BglI	GCCNNNNNGGC	1 cut(s)	1076
BisI	GCNGC	8 cut(s)	201, 204, 911, 1037, 1045, 1299, 1408, 1519
BlsI	GCNGC	8 cut(s)	202, 205, 912, 1038, 1046, 1300, 1409, 1520
Bme1390I	CCNGG	8 cut(s)	79, 447, 448, 464, 847, 960, 961, 1615
Bme18I	GGWCC	3 cut(s)	1005, 1324, 1435
BmeRI	GACNNNNNGTC	1 cut(s)	1015
BmeT110I	CYCGRG	4 cut(s)	446, 689, 959, 1352
BmgT120I	GGNCC	6 cut(s)	832, 1005, 1324, 1435, 1626, 1650
BmiI	GGNNCC	4 cut(s)	825, 834, 957, 1437
BmrFI	CCNGG	8 cut(s)	79, 447, 448, 464, 847, 960, 961, 1615
BmsI	GCATC	4 cut(s)	573, 957, 1494, 1501
BmtI	GCTAGC	2 cut(s)	881, 1125
BpiI	GAAGAC	3 cut(s)	226, 1378, 1460
Bpu14I	TTCGAA	2 cut(s)	684, 1166
BpuMI	CCSGG	7 cut(s)	79, 447, 448, 464, 847, 960, 961
Bsa29I	ATCGAT	1 cut(s)	594
BsaHI	GRCGYC	3 cut(s)	1062, 1101, 1383
BsaI	GGTCTC	1 cut(s)	712
BsaJI	CCNNGG	5 cut(s)	446, 447, 462, 495, 959
BsaWI	WCCGGW	3 cut(s)	17, 1027, 1400
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 306, 336
Bsc4I	CCNNNNNNNGG	4 cut(s)	845, 1138, 1209, 1513
Bse118I	RCCGGY	3 cut(s)	17, 1103, 1367
Bse1I	ACTGG	3 cut(s)	1080, 1362, 1653
BseAI	TCCGGA	1 cut(s)	1027
BseBI	CCWGG	1 cut(s)	1615
BseCI	ATCGAT	1 cut(s)	594
BseDI	CCNNGG	5 cut(s)	446, 447, 462, 495, 959
BseGI	GGATG	2 cut(s)	92, 375
BseLI	CCNNNNNNNGG	4 cut(s)	845, 1138, 1209, 1513
BseNI	ACTGG	3 cut(s)	1080, 1362, 1653
BseRI	GAGGAG	8 cut(s)	311, 350, 481, 563, 723, 726, 962, 1046
BseSI	GKGCMC	1 cut(s)	1584
BseXI	GCAGC	3 cut(s)	190, 1023, 1285
BseYI	CCCAGC	2 cut(s)	1598, 1603
Bsh1236I	CGCG	4 cut(s)	521, 1156, 1374, 1490
Bsh1285I	CGRYCG	3 cut(s)	768, 1207, 1372
BshFI	GGCC	6 cut(s)	833, 1213, 1243, 1613, 1628, 1652
BshTI	ACCGGT	1 cut(s)	17
BshVI	ATCGAT	1 cut(s)	594
BsiEI	CGRYCG	3 cut(s)	768, 1207, 1372
BsiHKAI	GWGCWC	3 cut(s)	504, 1131, 1584
BsiHKCI	CYCGRG	4 cut(s)	446, 689, 959, 1352
BsiWI	CGTACG	1 cut(s)	1151
BslFI	GGGAC	1 cut(s)	1509
BslI	CCNNNNNNNGG	4 cut(s)	845, 1138, 1209, 1513
BsmAI	GTCTC	2 cut(s)	712, 1069
BsmBI	CGTCTC	1 cut(s)	1069
BsmFI	GGGAC	1 cut(s)	1509
BsnI	GGCC	6 cut(s)	833, 1213, 1243, 1613, 1628, 1652
Bso31I	GGTCTC	1 cut(s)	712
BsoBI	CYCGRG	4 cut(s)	446, 689, 959, 1352
Bsp119I	TTCGAA	2 cut(s)	684, 1166
Bsp1286I	GDGCHC	4 cut(s)	504, 960, 1131, 1584
Bsp13I	TCCGGA	1 cut(s)	1027
Bsp143I	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
Bsp19I	CCATGG	1 cut(s)	495
BspANI	GGCC	6 cut(s)	833, 1213, 1243, 1613, 1628, 1652
BspDI	ATCGAT	1 cut(s)	594
BspEI	TCCGGA	1 cut(s)	1027
BspFNI	CGCG	4 cut(s)	521, 1156, 1374, 1490
BspLI	GGNNCC	4 cut(s)	825, 834, 957, 1437
BspMAI	CTGCAG	1 cut(s)	1041
BspMI	ACCTGC	1 cut(s)	1567
BspOI	GCTAGC	2 cut(s)	881, 1125
BspPI	GGATC	2 cut(s)	1430, 1562
BspT104I	TTCGAA	2 cut(s)	684, 1166
BspTNI	GGTCTC	1 cut(s)	712
BsrFI	RCCGGY	3 cut(s)	17, 1103, 1367
BsrI	ACTGG	3 cut(s)	1080, 1362, 1653
BssAI	RCCGGY	3 cut(s)	17, 1103, 1367
BssECI	CCNNGG	5 cut(s)	446, 447, 462, 495, 959
BssMI	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
BssNI	GRCGYC	3 cut(s)	1062, 1101, 1383
BssT1I	CCWWGG	1 cut(s)	495
Bst2UI	CCWGG	1 cut(s)	1615
Bst4CI	ACNGT	4 cut(s)	723, 769, 1537, 1663
Bst6I	CTCTTC	2 cut(s)	700, 917
BstACI	GRCGYC	3 cut(s)	1062, 1101, 1383
BstBI	TTCGAA	2 cut(s)	684, 1166
BstC8I	GCNNGC	7 cut(s)	879, 900, 1123, 1127, 1344, 1359, 1516
BstDSI	CCRYGG	1 cut(s)	495
BstF5I	GGATG	2 cut(s)	92, 375
BstFNI	CGCG	4 cut(s)	521, 1156, 1374, 1490
BstH2I	RGCGCY	1 cut(s)	1050
BstHHI	GCGC	3 cut(s)	1049, 1081, 1158
BstKTI	GATC	5 cut(s)	1176, 1207, 1425, 1503, 1557
BstMAI	GTCTC	2 cut(s)	712, 1069
BstMBI	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
BstMCI	CGRYCG	3 cut(s)	768, 1207, 1372
BstMWI	GCNNNNNNNGC	5 cut(s)	830, 1076, 1131, 1153, 1380
BstNI	CCWGG	1 cut(s)	1615
BstNSI	RCATGY	1 cut(s)	1573
BstSCI	CCNGG	8 cut(s)	77, 445, 446, 462, 845, 958, 959, 1613
BstSFI	CTRYAG	1 cut(s)	1037
BstSLI	GKGCMC	1 cut(s)	1584
BstUI	CGCG	4 cut(s)	521, 1156, 1374, 1490
BstV1I	GCAGC	3 cut(s)	190, 1023, 1285
BstV2I	GAAGAC	3 cut(s)	226, 1378, 1460
BstX2I	RGATCY	1 cut(s)	1422
BstYI	RGATCY	1 cut(s)	1422
Bsu15I	ATCGAT	1 cut(s)	594
BsuRI	GGCC	6 cut(s)	833, 1213, 1243, 1613, 1628, 1652
BsuTUI	ATCGAT	1 cut(s)	594
BtgI	CCRYGG	1 cut(s)	495
BtgZI	GCGATG	2 cut(s)	522, 1471
BtsCI	GGATG	2 cut(s)	92, 375
BtsI	GCAGTG	2 cut(s)	216, 625
BtsIMutI	CAGTG	4 cut(s)	216, 625, 1272, 1369
BveI	ACCTGC	1 cut(s)	1567
Cac8I	GCNNGC	7 cut(s)	879, 900, 1123, 1127, 1344, 1359, 1516
CfoI	GCGC	3 cut(s)	1049, 1081, 1158
Cfr10I	RCCGGY	3 cut(s)	17, 1103, 1367
Cfr13I	GGNCC	6 cut(s)	832, 1005, 1324, 1435, 1626, 1650
Cfr9I	CCCGGG	2 cut(s)	446, 959
ClaI	ATCGAT	1 cut(s)	594
CseI	GACGC	5 cut(s)	527, 1005, 1109, 1304, 1372
Csp6I	GTAC	1 cut(s)	1152
CspAI	ACCGGT	1 cut(s)	17
CviAII	CATG	6 cut(s)	496, 568, 586, 1570, 1609, 1668
CviQI	GTAC	1 cut(s)	1152
DpnI	GATC	5 cut(s)	1175, 1206, 1424, 1502, 1556
DpnII	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
DriI	GACNNNNNGTC	1 cut(s)	1015
EaeI	YGGCCR	2 cut(s)	1211, 1611
Eam1104I	CTCTTC	2 cut(s)	700, 917
Eam1105I	GACNNNNNGTC	1 cut(s)	1015
EarI	CTCTTC	2 cut(s)	700, 917
EciI	GGCGGA	3 cut(s)	39, 337, 917
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	1 cut(s)	495
Eco24I	GRGCYC	2 cut(s)	504, 960
Eco31I	GGTCTC	1 cut(s)	712
Eco47I	GGWCC	3 cut(s)	1005, 1324, 1435
Eco53kI	GAGCTC	1 cut(s)	502
Eco57I	CTGAAG	2 cut(s)	992, 1372
Eco88I	CYCGRG	4 cut(s)	446, 689, 959, 1352
EcoICRI	GAGCTC	1 cut(s)	502
EcoRII	CCWGG	1 cut(s)	1613
EcoT14I	CCWWGG	1 cut(s)	495
EcoT22I	ATGCAT	1 cut(s)	40
EcoT38I	GRGCYC	2 cut(s)	504, 960
ErhI	CCWWGG	1 cut(s)	495
Esp3I	CGTCTC	1 cut(s)	1069
FaeI	CATG	6 cut(s)	499, 571, 589, 1573, 1612, 1671
FaqI	GGGAC	1 cut(s)	1509
FatI	CATG	6 cut(s)	495, 567, 585, 1569, 1608, 1667
FauI	CCCGC	3 cut(s)	167, 668, 1507
FblI	GTMKAC	1 cut(s)	735
Fnu4HI	GCNGC	8 cut(s)	201, 204, 911, 1037, 1045, 1299, 1408, 1519
FokI	GGATG	2 cut(s)	79, 362
FriOI	GRGCYC	2 cut(s)	504, 960
Fsp4HI	GCNGC	8 cut(s)	201, 204, 911, 1037, 1045, 1299, 1408, 1519
FspBI	CTAG	3 cut(s)	878, 1122, 1251
GlaI	GCGC	3 cut(s)	1048, 1080, 1157
GluI	GCNGC	8 cut(s)	201, 204, 911, 1037, 1045, 1299, 1408, 1519
GsaI	CCCAGC	2 cut(s)	1602, 1607
HaeII	RGCGCY	1 cut(s)	1050
HaeIII	GGCC	6 cut(s)	833, 1213, 1243, 1613, 1628, 1652
HgaI	GACGC	5 cut(s)	527, 1005, 1109, 1304, 1372
HhaI	GCGC	3 cut(s)	1049, 1081, 1158
Hin1I	GRCGYC	3 cut(s)	1062, 1101, 1383
Hin1II	CATG	6 cut(s)	499, 571, 589, 1573, 1612, 1671
Hin6I	GCGC	3 cut(s)	1047, 1079, 1156
HinP1I	GCGC	3 cut(s)	1047, 1079, 1156
HincII	GTYRAC	1 cut(s)	736
HindII	GTYRAC	1 cut(s)	736
HphI	GGTGA	5 cut(s)	90, 478, 1388, 1510, 1549
Hpy166II	GTNNAC	2 cut(s)	736, 1582
Hpy188III	TCNNGA	3 cut(s)	396, 763, 1028
Hpy8I	GTNNAC	2 cut(s)	736, 1582
HpyAV	CCTTC	9 cut(s)	75, 111, 304, 849, 937, 1216, 1233, 1408, 1588
HpyCH4III	ACNGT	4 cut(s)	723, 769, 1537, 1663
HpyCH4IV	ACGT	5 cut(s)	231, 990, 1062, 1150, 1288
HpyCH4V	TGCA	7 cut(s)	38, 206, 260, 1039, 1569, 1582, 1667
HpyF10VI	GCNNNNNNNGC	5 cut(s)	830, 1076, 1131, 1153, 1380
HpySE526I	ACGT	5 cut(s)	231, 990, 1062, 1150, 1288
Hsp92I	GRCGYC	3 cut(s)	1062, 1101, 1383
Hsp92II	CATG	6 cut(s)	499, 571, 589, 1573, 1612, 1671
HspAI	GCGC	3 cut(s)	1047, 1079, 1156
Kpn2I	TCCGGA	1 cut(s)	1027
Kzo9I	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
LmnI	GCTCC	6 cut(s)	324, 499, 829, 955, 1033, 1134
Lsp1109I	GCAGC	3 cut(s)	190, 1023, 1285
LweI	GCATC	4 cut(s)	573, 957, 1494, 1501
MaeI	CTAG	3 cut(s)	878, 1122, 1251
MaeII	ACGT	5 cut(s)	231, 990, 1062, 1150, 1288
MaeIII	GTNAC	3 cut(s)	620, 1292, 1442
MalI	GATC	5 cut(s)	1175, 1206, 1424, 1502, 1556
MboI	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
MflI	RGATCY	1 cut(s)	1422
MhlI	GDGCHC	4 cut(s)	504, 960, 1131, 1584
MlsI	TGGCCA	1 cut(s)	1613
MluCI	AATT	8 cut(s)	127, 418, 439, 457, 469, 543, 679, 748
MluNI	TGGCCA	1 cut(s)	1613
MlyI	GAGTC	9 cut(s)	284, 327, 602, 632, 899, 934, 959, 1273, 1549
MmeI	TCCRAC	5 cut(s)	403, 933, 1032, 1413, 1637
Mox20I	TGGCCA	1 cut(s)	1613
Mph1103I	ATGCAT	1 cut(s)	40
MroI	TCCGGA	1 cut(s)	1027
MscI	TGGCCA	1 cut(s)	1613
MslI	CAYNNNNRTG	3 cut(s)	584, 1259, 1490
Msp20I	TGGCCA	1 cut(s)	1613
MspA1I	CMGCKG	1 cut(s)	203
MspR9I	CCNGG	8 cut(s)	79, 447, 448, 464, 847, 960, 961, 1615
MvaI	CCWGG	1 cut(s)	1615
MvnI	CGCG	4 cut(s)	521, 1156, 1374, 1490
MwoI	GCNNNNNNNGC	5 cut(s)	830, 1076, 1131, 1153, 1380
NciI	CCSGG	7 cut(s)	79, 447, 448, 464, 847, 960, 961
NcoI	CCATGG	1 cut(s)	495
NdeII	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
NheI	GCTAGC	2 cut(s)	877, 1121
NlaIII	CATG	6 cut(s)	499, 571, 589, 1573, 1612, 1671
NlaIV	GGNNCC	4 cut(s)	825, 834, 957, 1437
NmuCI	GTSAC	3 cut(s)	620, 1292, 1442
NsiI	ATGCAT	1 cut(s)	40
NspI	RCATGY	1 cut(s)	1573
NspV	TTCGAA	2 cut(s)	684, 1166
OliI	CACNNNNGTG	1 cut(s)	1259
PaqCI	CACCTGC	1 cut(s)	1567
PcsI	WCGNNNNNNNCGW	1 cut(s)	600
PfeI	GAWTC	7 cut(s)	119, 399, 524, 596, 795, 931, 937
Pfl23II	CGTACG	1 cut(s)	1151
PflFI	GACNNNGTC	2 cut(s)	53, 1448
PinAI	ACCGGT	1 cut(s)	17
PkrI	GCNGC	8 cut(s)	202, 205, 912, 1038, 1046, 1300, 1409, 1520
Ple19I	CGATCG	1 cut(s)	1207
PleI	GAGTC	9 cut(s)	284, 327, 602, 632, 898, 933, 958, 1273, 1548
PpsI	GAGTC	9 cut(s)	284, 327, 602, 632, 898, 933, 958, 1273, 1548
Psp124BI	GAGCTC	1 cut(s)	504
Psp6I	CCWGG	1 cut(s)	1613
PspFI	CCCAGC	2 cut(s)	1598, 1603
PspGI	CCWGG	1 cut(s)	1613
PspLI	CGTACG	1 cut(s)	1151
PspN4I	GGNNCC	4 cut(s)	825, 834, 957, 1437
PspPI	GGNCC	6 cut(s)	832, 1005, 1324, 1435, 1626, 1650
PstI	CTGCAG	1 cut(s)	1041
PsuI	RGATCY	1 cut(s)	1422
PsyI	GACNNNGTC	2 cut(s)	53, 1448
PvuI	CGATCG	1 cut(s)	1207
RsaI	GTAC	1 cut(s)	1153
RsaNI	GTAC	1 cut(s)	1152
RseI	CAYNNNNRTG	3 cut(s)	584, 1259, 1490
SacI	GAGCTC	1 cut(s)	504
SalI	GTCGAC	1 cut(s)	734
SatI	GCNGC	8 cut(s)	201, 204, 911, 1037, 1045, 1299, 1408, 1519
Sau3AI	GATC	5 cut(s)	1173, 1204, 1422, 1500, 1554
Sau96I	GGNCC	6 cut(s)	832, 1005, 1324, 1435, 1626, 1650
SchI	GAGTC	9 cut(s)	284, 327, 602, 632, 899, 934, 959, 1273, 1549
ScrFI	CCNGG	8 cut(s)	79, 447, 448, 464, 847, 960, 961, 1615
SduI	GDGCHC	4 cut(s)	504, 960, 1131, 1584
SfaNI	GCATC	4 cut(s)	573, 957, 1494, 1501
SfcI	CTRYAG	1 cut(s)	1037
SfuI	TTCGAA	2 cut(s)	684, 1166
SgrAI	CRCCGGYG	1 cut(s)	1103
SinI	GGWCC	3 cut(s)	1005, 1324, 1435
SmaI	CCCGGG	2 cut(s)	448, 961
SmiMI	CAYNNNNRTG	3 cut(s)	584, 1259, 1490
SrfI	GCCCGGGC	1 cut(s)	961
Sse9I	AATT	8 cut(s)	127, 418, 439, 457, 469, 543, 679, 748
SspMI	CTAG	3 cut(s)	878, 1122, 1251
SstI	GAGCTC	1 cut(s)	504
StyD4I	CCNGG	8 cut(s)	77, 445, 446, 462, 845, 958, 959, 1613
StyI	CCWWGG	1 cut(s)	495
TaaI	ACNGT	4 cut(s)	723, 769, 1537, 1663
TaiI	ACGT	5 cut(s)	234, 993, 1065, 1153, 1291
TasI	AATT	8 cut(s)	127, 418, 439, 457, 469, 543, 679, 748
TauI	GCSGC	5 cut(s)	203, 913, 1047, 1410, 1521
TfiI	GAWTC	7 cut(s)	119, 399, 524, 596, 795, 931, 937
TscAI	CASTG	4 cut(s)	223, 625, 1272, 1369
TseFI	GTSAC	3 cut(s)	620, 1292, 1442
TseI	GCWGC	3 cut(s)	203, 1036, 1298
Tsp45I	GTSAC	3 cut(s)	620, 1292, 1442
TspDTI	ATGAA	4 cut(s)	210, 411, 602, 1235
TspGWI	ACGGA	5 cut(s)	589, 650, 805, 816, 1112
TspMI	CCCGGG	2 cut(s)	446, 959
TspRI	CASTG	4 cut(s)	223, 625, 1272, 1369
Tth111I	GACNNNGTC	2 cut(s)	53, 1448
VneI	GTGCAC	1 cut(s)	1580
VpaK11BI	GGWCC	3 cut(s)	1005, 1324, 1435
XapI	RAATTY	2 cut(s)	469, 679
XceI	RCATGY	1 cut(s)	1573
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XmaI	CCCGGG	2 cut(s)	446, 959
XmiI	GTMKAC	1 cut(s)	735
XspI	CTAG	3 cut(s)	878, 1122, 1251
ZraI	GACGTC	1 cut(s)	1063
Zsp2I	ATGCAT	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.