Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002359

Physical Location & Seq

Genomic Coordinates Forward (+)

14496658 .. 14509403

Gene Structure 12746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00344410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGTCTTCGTGTTTTACCGGTGGCGGAAGAACCTATGCATTTGAGCTTGACATAGTCAAATCCCCTTCCACTTCAACCCGGACTTCACAAACATCCTCACCTTCTTCCACTCTCTCGGAATCAAGCAATTCGGCACTCGCAATCTCCACCCGAAAACCCCGCACCCCTCGCAAACGCCCCAACCAGACTTACAATGAAGCCGCTGCATTACTCTCCACTGCTTACCCCAACGTCTTCTCCACCAAAATCCTCACAAATCCTCGCAAATCCACCAAACCCCATGACTCCTTCCTCGATCCATCTTCCGAACTGCTCCTCCCTCTCAGACTCATCGACAATTCCGCCACTTTCCTCCTCCACAACCCCATCCGAGAAAAGCCCAATTCTCGATTCGAGCCGAAAGCCATCAATTCATTTGAAAAGTCTTGTAATTCGCCTGGGGAGTTCAATTCCCCGGTGAATTTCGACTCCAATCCCAACTCCTCCATGGAGCTATGCGATGACTTCGACGCGGAATCTATGCTGGACGAGGAAATTGAGGAGGGTATTGATAGTATCATGGGGAGTAGCACCAGCATGAACATCGACTCCGTCGATGAGTCCACTAGTAGTGACCCAATGATGACGGACTCCTGCTATGGCTACCCAATGGGGTTGGGATTTGGCGGGAATTTCGAACTCGGGTTCGGATTCAGAAGAGGAGGAGTGAGACCGTTGAGGCAAGTCGACGATGGAGTGAATTGGTGGAGTTTCCCCACCGTCGATGTTGTTGAAATCTCGCCCAGATTCAACAAATCTCGGCCGTCCGTTCCGGCTCCGTCGTCGTCCCCACCTTCTGCCGGGAAGAAGAAGAAGAAGAAGATGGAGAAGCTAGCGGTGGTGGAGTCCAAGCTGGCGGAGTTGCCGCTAAAGGAGAAGATCAGTCCGAATCCGAAGGAGGAGTCGGAGCCTGGGCTGATGCTGAAGCTGGACTACGACGACGTTTTGAGTGCTTGGTCCGACAAAGCGTCGCCGTTTCCGGAGGAGTTGCAGGGCAGCGCTGATGGAAACGACGTCTCTGCCAGACTGGCGCAGATTGATTTATTCACGGACGCCGGTGGTTTGAGAGAGGCTAGCGTGCTCCGCTACAAGGAAAAACGACGTACGCGCCTCTTTTCGAAGAAGATCAGGTACCAAGTCCGCAAAGTCAATGCCGATCGACGGCCAAGAATGAAGGTACTTTTTTTGAGCCAATTCCTTTTTGTGTGGAATCTTAAGGATTGCTTGAAACTAGATGCCATGACAAACCAAAAATTCTTATTGGGAAGTCCAAAACTACATGATAAAATCATACTTTTTTGCCCTCTCCCCCCTCACCGATTTCTCTCTCCTCCTCCCTCACCGATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGACGACGACGTCGGATTTCTCTCTCCCTCCCTCCATCCCTCCAACAGGTCGCCCACGAGGCTCGCTCTCGCCATCGCCGCGCCGAAACTCGTCGTCGTGCTCTCCGCCGCCGGGCTCGACGCCAAGCCGACGGTCCTCGCAACCGAGAAGCTCGGCGAGGCCGGGTTTGACCTTCGAAGGAATAGACGACGGACTGAAAACTCGCTATCCGGGACCGAAAACTGCTATCCGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0015031 GO:0015833 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT

Protein Analysis

570

Amino Acids

62.69

Weight (kDa)

8.75

Isoelectric Point (pI)

54.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCT	PF06203	369 - 410	7.4e-15	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25990 AT4G25990 AT4G25990 AT5G57180 AT5G57180 AT5G57180 AT5G57180
fragaria_vesca	FvH4_2g01490 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_4g07270 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780 FvH4_6g24780
malus_domestica	MD13G1239300.v1.1 MD16G1248400.v1.1
prunus_persica	Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1 Prupe.1G074900_v2.0.a1
pyrus_communis	pycom13g21340 pycom16g20820
rosa_chinensis	RchiOBHm_Chr4g0399481
rosa_laevigata	RLG00000009263
rosa_multiflora	Rmu_sc0002285.1_g000032 Rmu_sc0004311.1_g000007
rosa_roxburghii	Rroxscaffold_5G00344410
rosa_rugosa	Rorug04G0017200 Rorug04G0017300 Rorug04G0017300
rosa_samantha	Rh4AG095100 Rh4BG092500 Rh4CG103600 Rh4DG087400
rosa_wichuraiana	Rw4G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1484
AatII	GACGTC	2 cut(s)	1056, 1488
Acc65I	GGTACC	1 cut(s)	1170
AccB1I	GGYRCC	1 cut(s)	1170
AccI	GTMKAC	1 cut(s)	726
AccII	CGCG	3 cut(s)	512, 1147, 1556
AccIII	TCCGGA	1 cut(s)	1018
AclWI	GGATC	1 cut(s)	290
AcoI	YGGCCR	2 cut(s)	800, 1202
AcsI	RAATTY	3 cut(s)	460, 670, 1292
AcuI	CTGAAG	1 cut(s)	983
AcyI	GRCGYC	4 cut(s)	1053, 1092, 1485, 1596
AfaI	GTAC	3 cut(s)	1144, 1172, 1218
AfeI	AGCGCT	1 cut(s)	1039
AfiI	CCNNNNNNNGG	5 cut(s)	839, 1129, 1200, 1521, 1587
AflII	CTTAAG	1 cut(s)	1253
AgeI	ACCGGT	1 cut(s)	17
AgsI	TTSAA	6 cut(s)	75, 419, 448, 773, 790, 1267
AhdI	GACNNNNNGTC	1 cut(s)	1006
AhlI	ACTAGT	1 cut(s)	605
AjnI	CCWGG	2 cut(s)	436, 949
AjuI	GAANNNNNNNTTGG	2 cut(s)	374, 406
AloI	GAACNNNNNNTCC	4 cut(s)	300, 332, 572, 604
AluBI	AGCT	6 cut(s)	46, 493, 871, 892, 967, 1627
AluI	AGCT	6 cut(s)	46, 493, 871, 892, 967, 1627
Alw21I	GWGCWC	2 cut(s)	1122, 1578
Alw26I	GTCTC	2 cut(s)	703, 1060
AlwI	GGATC	1 cut(s)	290
Ama87I	CYCGRG	1 cut(s)	680
Aor13HI	TCCGGA	1 cut(s)	1018
Aor51HI	AGCGCT	1 cut(s)	1039
AoxI	GGCC	3 cut(s)	800, 1202, 1635
ApeKI	GCWGC	2 cut(s)	203, 1035
ApoI	RAATTY	3 cut(s)	460, 670, 1292
ArsI	GACNNNNNNTTYG	2 cut(s)	926, 958
AsiGI	ACCGGT	1 cut(s)	17
Asp718I	GGTACC	1 cut(s)	1170
AspLEI	GCGC	4 cut(s)	1040, 1072, 1149, 1558
AspS9I	GGNCC	3 cut(s)	996, 1609, 1689
AsuC2I	CCSGG	6 cut(s)	79, 455, 841, 1588, 1639, 1687
AsuHPI	GGTGA	4 cut(s)	90, 469, 1346, 1371
AsuII	TTCGAA	3 cut(s)	675, 1157, 1651
AsuNHI	GCTAGC	2 cut(s)	871, 1112
AvaI	CYCGRG	1 cut(s)	680
AvaII	GGWCC	3 cut(s)	996, 1609, 1689
BanI	GGYRCC	1 cut(s)	1170
BanII	GRGCYC	1 cut(s)	1593
BarI	GAAGNNNNNNTAC	4 cut(s)	956, 988, 1154, 1186
BauI	CACGAG	1 cut(s)	1531
BbsI	GAAGAC	1 cut(s)	226
Bbv12I	GWGCWC	2 cut(s)	1122, 1578
BbvI	GCAGC	2 cut(s)	190, 1047
BccI	CCATC	8 cut(s)	307, 374, 413, 725, 856, 1037, 1518, 1556
BceAI	ACGGC	3 cut(s)	787, 997, 1217
BcgI	CGANNNNNNTGC	4 cut(s)	565, 599, 1040, 1074
BciT130I	CCWGG	2 cut(s)	438, 951
BcnI	CCSGG	6 cut(s)	79, 455, 841, 1588, 1639, 1687
BcoDI	GTCTC	2 cut(s)	703, 1060
BcuI	ACTAGT	1 cut(s)	605
BfaI	CTAG	4 cut(s)	606, 872, 1113, 1271
BfmI	CTRYAG	1 cut(s)	1709
BfoI	RGCGCY	1 cut(s)	1041
BfrI	CTTAAG	1 cut(s)	1253
BglI	GCCNNNNNGGC	2 cut(s)	1067, 1534
BisI	GCNGC	6 cut(s)	201, 204, 905, 1036, 1554, 1584
BlsI	GCNGC	6 cut(s)	202, 205, 906, 1037, 1555, 1585
Bme1390I	CCNGG	8 cut(s)	79, 438, 455, 841, 951, 1588, 1639, 1687
Bme18I	GGWCC	3 cut(s)	996, 1609, 1689
BmeRI	GACNNNNNGTC	1 cut(s)	1006
BmeT110I	CYCGRG	1 cut(s)	680
BmgT120I	GGNCC	3 cut(s)	996, 1609, 1689
BmiI	GGNNCC	4 cut(s)	816, 948, 1172, 1690
BmrFI	CCNGG	8 cut(s)	79, 438, 455, 841, 951, 1588, 1639, 1687
BmsI	GCATC	2 cut(s)	948, 1264
BmtI	GCTAGC	2 cut(s)	875, 1116
BpiI	GAAGAC	1 cut(s)	226
BplI	GAGNNNNNCTC	2 cut(s)	1525, 1557
Bpu14I	TTCGAA	3 cut(s)	675, 1157, 1651
BpuMI	CCSGG	6 cut(s)	79, 455, 841, 1588, 1639, 1687
BsaHI	GRCGYC	4 cut(s)	1053, 1092, 1485, 1596
BsaI	GGTCTC	1 cut(s)	703
BsaJI	CCNNGG	4 cut(s)	437, 453, 486, 950
BsaWI	WCCGGW	2 cut(s)	17, 1018
BsaXI	ACNNNNNCTCC	6 cut(s)	221, 251, 300, 330, 572, 602
Bsc4I	CCNNNNNNNGG	5 cut(s)	839, 1129, 1200, 1521, 1587
Bse118I	RCCGGY	2 cut(s)	17, 1094
Bse1I	ACTGG	1 cut(s)	1071
BseAI	TCCGGA	1 cut(s)	1018
BseBI	CCWGG	2 cut(s)	438, 951
BseDI	CCNNGG	4 cut(s)	437, 453, 486, 950
BseGI	GGATG	3 cut(s)	92, 366, 1510
BseLI	CCNNNNNNNGG	5 cut(s)	839, 1129, 1200, 1521, 1587
BseMII	CTCAG	1 cut(s)	337
BseNI	ACTGG	1 cut(s)	1071
BseX3I	CGGCCG	1 cut(s)	800
BseXI	GCAGC	2 cut(s)	190, 1047
Bsh1236I	CGCG	3 cut(s)	512, 1147, 1556
Bsh1285I	CGRYCG	2 cut(s)	803, 1198
BshFI	GGCC	3 cut(s)	802, 1204, 1637
BshNI	GGYRCC	1 cut(s)	1170
BshTI	ACCGGT	1 cut(s)	17
BsiEI	CGRYCG	2 cut(s)	803, 1198
BsiHKAI	GWGCWC	2 cut(s)	1122, 1578
BsiHKCI	CYCGRG	1 cut(s)	680
BsiWI	CGTACG	1 cut(s)	1142
BslFI	GGGAC	2 cut(s)	811, 1702
BslI	CCNNNNNNNGG	5 cut(s)	839, 1129, 1200, 1521, 1587
BsmAI	GTCTC	2 cut(s)	703, 1060
BsmBI	CGTCTC	1 cut(s)	1060
BsmFI	GGGAC	2 cut(s)	811, 1702
BsnI	GGCC	3 cut(s)	802, 1204, 1637
Bso31I	GGTCTC	1 cut(s)	703
BsoBI	CYCGRG	1 cut(s)	680
Bsp119I	TTCGAA	3 cut(s)	675, 1157, 1651
Bsp1286I	GDGCHC	3 cut(s)	1122, 1578, 1593
Bsp13I	TCCGGA	1 cut(s)	1018
Bsp143I	GATC	4 cut(s)	295, 918, 1164, 1195
Bsp19I	CCATGG	1 cut(s)	486
BspANI	GGCC	3 cut(s)	802, 1204, 1637
BspCNI	CTCAG	1 cut(s)	336
BspEI	TCCGGA	1 cut(s)	1018
BspFNI	CGCG	3 cut(s)	512, 1147, 1556
BspLI	GGNNCC	4 cut(s)	816, 948, 1172, 1690
BspOI	GCTAGC	2 cut(s)	875, 1116
BspPI	GGATC	1 cut(s)	290
BspT104I	TTCGAA	3 cut(s)	675, 1157, 1651
BspT107I	GGYRCC	1 cut(s)	1170
BspTI	CTTAAG	1 cut(s)	1253
BspTNI	GGTCTC	1 cut(s)	703
BsrFI	RCCGGY	2 cut(s)	17, 1094
BsrI	ACTGG	1 cut(s)	1071
BssAI	RCCGGY	2 cut(s)	17, 1094
BssECI	CCNNGG	4 cut(s)	437, 453, 486, 950
BssMI	GATC	4 cut(s)	295, 918, 1164, 1195
BssNI	GRCGYC	4 cut(s)	1053, 1092, 1485, 1596
BssSI	CACGAG	1 cut(s)	1531
BssT1I	CCWWGG	1 cut(s)	486
Bst2BI	CACGAG	1 cut(s)	1531
Bst2UI	CCWGG	2 cut(s)	438, 951
Bst4CI	ACNGT	3 cut(s)	714, 760, 1609
Bst6I	CTCTTC	1 cut(s)	691
BstACI	GRCGYC	4 cut(s)	1053, 1092, 1485, 1596
BstAFI	CTTAAG	1 cut(s)	1253
BstBI	TTCGAA	3 cut(s)	675, 1157, 1651
BstC8I	GCNNGC	5 cut(s)	873, 894, 1114, 1118, 1539
BstDEI	CTNAG	1 cut(s)	323
BstDSI	CCRYGG	1 cut(s)	486
BstENI	CCTNNNNNAGG	1 cut(s)	1519
BstF5I	GGATG	3 cut(s)	92, 366, 1510
BstFNI	CGCG	3 cut(s)	512, 1147, 1556
BstH2I	RGCGCY	1 cut(s)	1041
BstHHI	GCGC	4 cut(s)	1040, 1072, 1149, 1558
BstKTI	GATC	4 cut(s)	298, 921, 1167, 1198
BstMAI	GTCTC	2 cut(s)	703, 1060
BstMBI	GATC	4 cut(s)	295, 918, 1164, 1195
BstMCI	CGRYCG	2 cut(s)	803, 1198
BstMWI	GCNNNNNNNGC	5 cut(s)	168, 1067, 1122, 1534, 1553
BstNI	CCWGG	2 cut(s)	438, 951
BstSCI	CCNGG	8 cut(s)	77, 436, 453, 839, 949, 1586, 1637, 1685
BstSFI	CTRYAG	1 cut(s)	1709
BstUI	CGCG	3 cut(s)	512, 1147, 1556
BstV1I	GCAGC	2 cut(s)	190, 1047
BstV2I	GAAGAC	1 cut(s)	226
BstZI	CGGCCG	1 cut(s)	800
BsuRI	GGCC	3 cut(s)	802, 1204, 1637
BtgI	CCRYGG	1 cut(s)	486
BtgZI	GCGATG	2 cut(s)	513, 1534
BtsCI	GGATG	3 cut(s)	92, 366, 1510
BtsI	GCAGTG	1 cut(s)	216
BtsIMutI	CAGTG	1 cut(s)	216
Cac8I	GCNNGC	5 cut(s)	873, 894, 1114, 1118, 1539
CfoI	GCGC	4 cut(s)	1040, 1072, 1149, 1558
Cfr10I	RCCGGY	2 cut(s)	17, 1094
Cfr13I	GGNCC	3 cut(s)	996, 1609, 1689
CseI	GACGC	4 cut(s)	518, 996, 1100, 1604
Csp6I	GTAC	3 cut(s)	1143, 1171, 1217
CspAI	ACCGGT	1 cut(s)	17
CviAII	CATG	6 cut(s)	281, 487, 559, 577, 1279, 1319
CviQI	GTAC	3 cut(s)	1143, 1171, 1217
DdeI	CTNAG	1 cut(s)	323
DpnI	GATC	4 cut(s)	297, 920, 1166, 1197
DpnII	GATC	4 cut(s)	295, 918, 1164, 1195
DrdI	GACNNNNNNGTC	1 cut(s)	1484
DriI	GACNNNNNGTC	1 cut(s)	1006
DseDI	GACNNNNNNGTC	1 cut(s)	1484
EaeI	YGGCCR	2 cut(s)	800, 1202
EagI	CGGCCG	1 cut(s)	800
Eam1104I	CTCTTC	1 cut(s)	691
Eam1105I	GACNNNNNGTC	1 cut(s)	1006
EarI	CTCTTC	1 cut(s)	691
EciI	GGCGGA	4 cut(s)	39, 331, 911, 1570
EclXI	CGGCCG	1 cut(s)	800
Eco130I	CCWWGG	1 cut(s)	486
Eco24I	GRGCYC	1 cut(s)	1593
Eco31I	GGTCTC	1 cut(s)	703
Eco47I	GGWCC	3 cut(s)	996, 1609, 1689
Eco47III	AGCGCT	1 cut(s)	1039
Eco52I	CGGCCG	1 cut(s)	800
Eco57I	CTGAAG	1 cut(s)	983
Eco88I	CYCGRG	1 cut(s)	680
EcoNI	CCTNNNNNAGG	1 cut(s)	1519
EcoRII	CCWGG	2 cut(s)	436, 949
EcoT14I	CCWWGG	1 cut(s)	486
EcoT22I	ATGCAT	1 cut(s)	40
EcoT38I	GRGCYC	1 cut(s)	1593
ErhI	CCWWGG	1 cut(s)	486
Esp3I	CGTCTC	1 cut(s)	1060
FaeI	CATG	6 cut(s)	284, 490, 562, 580, 1282, 1322
FalI	AAGNNNNNCTT	2 cut(s)	1247, 1279
FaqI	GGGAC	2 cut(s)	811, 1702
FatI	CATG	6 cut(s)	280, 486, 558, 576, 1278, 1318
FauI	CCCGC	2 cut(s)	167, 659
FblI	GTMKAC	1 cut(s)	726
Fnu4HI	GCNGC	6 cut(s)	201, 204, 905, 1036, 1554, 1584
FokI	GGATG	3 cut(s)	79, 353, 1497
FriOI	GRGCYC	1 cut(s)	1593
Fsp4HI	GCNGC	6 cut(s)	201, 204, 905, 1036, 1554, 1584
FspBI	CTAG	4 cut(s)	606, 872, 1113, 1271
GlaI	GCGC	4 cut(s)	1039, 1071, 1148, 1557
GluI	GCNGC	6 cut(s)	201, 204, 905, 1036, 1554, 1584
HaeII	RGCGCY	1 cut(s)	1041
HaeIII	GGCC	3 cut(s)	802, 1204, 1637
HgaI	GACGC	4 cut(s)	518, 996, 1100, 1604
HhaI	GCGC	4 cut(s)	1040, 1072, 1149, 1558
Hin1I	GRCGYC	4 cut(s)	1053, 1092, 1485, 1596
Hin1II	CATG	6 cut(s)	284, 490, 562, 580, 1282, 1322
Hin6I	GCGC	4 cut(s)	1038, 1070, 1147, 1556
HinP1I	GCGC	4 cut(s)	1038, 1070, 1147, 1556
HincII	GTYRAC	1 cut(s)	727
HindII	GTYRAC	1 cut(s)	727
HphI	GGTGA	4 cut(s)	90, 469, 1346, 1371
Hpy166II	GTNNAC	2 cut(s)	603, 727
Hpy188III	TCNNGA	3 cut(s)	387, 1019, 1475
Hpy8I	GTNNAC	2 cut(s)	603, 727
HpyAV	CCTTC	8 cut(s)	75, 111, 298, 843, 928, 1207, 1647, 1658
HpyCH4III	ACNGT	3 cut(s)	714, 760, 1609
HpyCH4IV	ACGT	5 cut(s)	231, 981, 1053, 1141, 1485
HpyCH4V	TGCA	3 cut(s)	38, 206, 1030
HpyF10VI	GCNNNNNNNGC	5 cut(s)	168, 1067, 1122, 1534, 1553
HpyF3I	CTNAG	1 cut(s)	323
HpySE526I	ACGT	5 cut(s)	231, 981, 1053, 1141, 1485
Hsp92I	GRCGYC	4 cut(s)	1053, 1092, 1485, 1596
Hsp92II	CATG	6 cut(s)	284, 490, 562, 580, 1282, 1322
HspAI	GCGC	4 cut(s)	1038, 1070, 1147, 1556
Kpn2I	TCCGGA	1 cut(s)	1018
KpnI	GGTACC	1 cut(s)	1174
Kzo9I	GATC	4 cut(s)	295, 918, 1164, 1195
LmnI	GCTCC	5 cut(s)	318, 490, 820, 946, 1125
Lsp1109I	GCAGC	2 cut(s)	190, 1047
LweI	GCATC	2 cut(s)	948, 1264
MaeI	CTAG	4 cut(s)	606, 872, 1113, 1271
MaeII	ACGT	5 cut(s)	231, 981, 1053, 1141, 1485
MaeIII	GTNAC	1 cut(s)	611
MalI	GATC	4 cut(s)	297, 920, 1166, 1197
MboI	GATC	4 cut(s)	295, 918, 1164, 1195
MhlI	GDGCHC	3 cut(s)	1122, 1578, 1593
MlyI	GAGTC	8 cut(s)	278, 321, 461, 581, 608, 623, 893, 950
MmeI	TCCRAC	4 cut(s)	924, 1023, 1468, 1542
Mph1103I	ATGCAT	1 cut(s)	40
MroI	TCCGGA	1 cut(s)	1018
MseI	TTAA	1 cut(s)	1254
MslI	CAYNNNNRTG	1 cut(s)	575
MspA1I	CMGCKG	1 cut(s)	203
MspCI	CTTAAG	1 cut(s)	1253
MspR9I	CCNGG	8 cut(s)	79, 438, 455, 841, 951, 1588, 1639, 1687
MvaI	CCWGG	2 cut(s)	438, 951
MvnI	CGCG	3 cut(s)	512, 1147, 1556
MwoI	GCNNNNNNNGC	5 cut(s)	168, 1067, 1122, 1534, 1553
NciI	CCSGG	6 cut(s)	79, 455, 841, 1588, 1639, 1687
NcoI	CCATGG	1 cut(s)	486
NdeII	GATC	4 cut(s)	295, 918, 1164, 1195
NheI	GCTAGC	2 cut(s)	871, 1112
NlaIII	CATG	6 cut(s)	284, 490, 562, 580, 1282, 1322
NlaIV	GGNNCC	4 cut(s)	816, 948, 1172, 1690
NmeAIII	GCCGAG	2 cut(s)	778, 1608
NmuCI	GTSAC	1 cut(s)	611
NsiI	ATGCAT	1 cut(s)	40
NspV	TTCGAA	3 cut(s)	675, 1157, 1651
PcsI	WCGNNNNNNNCGW	2 cut(s)	591, 1482
PfeI	GAWTC	7 cut(s)	119, 390, 515, 690, 786, 928, 1249
Pfl23II	CGTACG	1 cut(s)	1142
PflFI	GACNNNGTC	3 cut(s)	53, 590, 1484
PfoI	TCCNGGA	1 cut(s)	1685
PinAI	ACCGGT	1 cut(s)	17
PkrI	GCNGC	6 cut(s)	202, 205, 906, 1037, 1555, 1585
Ple19I	CGATCG	1 cut(s)	1198
PleI	GAGTC	8 cut(s)	278, 321, 461, 581, 607, 623, 892, 949
PpsI	GAGTC	8 cut(s)	278, 321, 461, 581, 607, 623, 892, 949
Psp6I	CCWGG	2 cut(s)	436, 949
PspGI	CCWGG	2 cut(s)	436, 949
PspLI	CGTACG	1 cut(s)	1142
PspN4I	GGNNCC	4 cut(s)	816, 948, 1172, 1690
PspPI	GGNCC	3 cut(s)	996, 1609, 1689
PsyI	GACNNNGTC	3 cut(s)	53, 590, 1484
PvuI	CGATCG	1 cut(s)	1198
RsaI	GTAC	3 cut(s)	1144, 1172, 1218
RsaNI	GTAC	3 cut(s)	1143, 1171, 1217
RseI	CAYNNNNRTG	1 cut(s)	575
SalI	GTCGAC	1 cut(s)	725
SaqAI	TTAA	1 cut(s)	1254
SatI	GCNGC	6 cut(s)	201, 204, 905, 1036, 1554, 1584
Sau3AI	GATC	4 cut(s)	295, 918, 1164, 1195
Sau96I	GGNCC	3 cut(s)	996, 1609, 1689
SchI	GAGTC	8 cut(s)	278, 321, 461, 581, 608, 623, 893, 950
ScrFI	CCNGG	8 cut(s)	79, 438, 455, 841, 951, 1588, 1639, 1687
SduI	GDGCHC	3 cut(s)	1122, 1578, 1593
SfaNI	GCATC	2 cut(s)	948, 1264
SfcI	CTRYAG	1 cut(s)	1709
SfuI	TTCGAA	3 cut(s)	675, 1157, 1651
SgrAI	CRCCGGYG	1 cut(s)	1094
SinI	GGWCC	3 cut(s)	996, 1609, 1689
SmiMI	CAYNNNNRTG	1 cut(s)	575
SmlI	CTYRAG	1 cut(s)	1253
SmoI	CTYRAG	1 cut(s)	1253
SpeI	ACTAGT	1 cut(s)	605
SspMI	CTAG	4 cut(s)	606, 872, 1113, 1271
StyD4I	CCNGG	8 cut(s)	77, 436, 453, 839, 949, 1586, 1637, 1685
StyI	CCWWGG	1 cut(s)	486
TaaI	ACNGT	3 cut(s)	714, 760, 1609
TaiI	ACGT	5 cut(s)	234, 984, 1056, 1144, 1488
TaqII	GACCGA	1 cut(s)	1706
TauI	GCSGC	4 cut(s)	203, 907, 1556, 1586
TfiI	GAWTC	7 cut(s)	119, 390, 515, 690, 786, 928, 1249
Tru1I	TTAA	1 cut(s)	1254
Tru9I	TTAA	1 cut(s)	1254
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	1 cut(s)	611
TseI	GCWGC	2 cut(s)	203, 1035
Tsp45I	GTSAC	1 cut(s)	611
TspDTI	ATGAA	4 cut(s)	210, 402, 593, 1226
TspGWI	ACGGA	6 cut(s)	580, 641, 796, 807, 1103, 1681
TspRI	CASTG	1 cut(s)	223
Tth111I	GACNNNGTC	3 cut(s)	53, 590, 1484
Vha464I	CTTAAG	1 cut(s)	1253
VpaK11BI	GGWCC	3 cut(s)	996, 1609, 1689
XagI	CCTNNNNNAGG	1 cut(s)	1519
XapI	RAATTY	3 cut(s)	460, 670, 1292
XcmI	CCANNNNNNNNNTGG	1 cut(s)	484
XmiI	GTMKAC	1 cut(s)	726
XspI	CTAG	4 cut(s)	606, 872, 1113, 1271
ZraI	GACGTC	2 cut(s)	1054, 1486
Zsp2I	ATGCAT	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.