Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001186

Physical Location & Seq

Genomic Coordinates Reverse (-)

41228004 .. 41231552

Gene Structure 3549 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ38648

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAATGGTGTTAATGCTTCTGATGAGGATTACCCAGAGTTTGTTGAGGTTGATCCTACTGGAAGATATGGAAGATATAATGAAATTCTGGGCAGAGGAGCTTCAAAGACAGTATATAGAGCCTTTGATGAGTATGAAGGGATTGAAGTGGCATGGAACCAAGTGAAGCTTTATGAGTTTTTGAGGAACCCTGAAGACCTTGAGAGGCTCTACCGCGAAATTCATCTCCTCAAGACCTTAAACCATAATCACATCATGAAGTTCTGCACTTCTTGGGTTGATACTGCAAACAGAAACATTAATTTTGTCACCGAGATGTTTACTTCTGGTACTCTAAGACAGTATAGGCTAAAACACAAGAGGGTTAACATCAGAGCAGTGAAGCATTGGTGTAGGCAAATTTTGAAAGGGCTTAATTATCTTCACAGCCATGAACCCCCTGTGATTCACAGGGATCTCAAGTGTGACAACATTTTCATCAATGGGAACCAAGGTGAAGTCAAGATTGGTGATCTTGGCCTTGCTGCCGTTCTCCGAAAATCCCATGCTGATCGCTGTGTTGGAACACCAGAATTCATGGCTCCTGAGGTTTATGAAGAGGAATACAATGAGTTAGTTGACATTTATTCTTTTGGGATGTGCATCTTAGAGATGGTTACCTTTGAATATCCATATAGTGAATGCAGTCATCCTGCTGAAATCTACAAGAAAGTTATCAATAGGAAAAAACCAGAAGCCCTATACAAAGTAAAAGATCCTGAGCTGCGAAGATTTGTAGATAAATGCTTAGCATCTGCATCTCATAGGCTCTCAGCTAAGGAGCTTTTGAAAGACCCTTTTCTTCAGATTGATGATTATGGTTATGATTTGAGGCCAATAGATTATCACAGGGATCTGTATGAAGTAGGGCCATTGATAGGACAACCTTACTCTGGAGTAAATCACAGTAATAGCTCTGTGAGCAATGGCTATGCCAATTATCTTGGTTATGAACCTGAAAATGATTTGGATTACCATCCAGATGATTACAGAATGAGTGAAATTGATCTCTTCACTCAAGAAGATGAGCATTCGGGAGATATTGACCTCACAATCAAAGGGCGACGGAAAGAAGACGATGGCATCTTTTTAAGGCTCAGAATTGCAGATAAAGAAGGCCGCATCCGAAACATCTACTTCCCATTTGATATTGAGAATGACACGGCATTGAGTGTTGCTACAGAAATGGTTGCTGAGCTTGATATCACAGACCAAGATGTGATAAAAATAGCAGAGATGATTGATGGTGAAATTGCTGCTTTAGTACCAGAGTGGAAGATGGGACCTGGTATAGAAGAAAGCCCTCATTGTACAAATGCAAGTATCTGTCAAAATTGTGCTTCATATGGTTCCATTTTGGATTATGCATCACCAAATAGTCCAGGTGTTAAGCAACTTCAAGTTCTTCAGTGTTCTAAACATGGATCTGCTGCTGTCCATGGCCGGTTTGAAGAGATTACGTATCAAGTTGAAGGATCAGAACAATGTCCTTCAGAAGGTCCACCGAGAACATCGAGCCATTCTGATGGTTTGCAGTACGCCGATATCTGGGCTCAACGAGATGGACCCGAATCAAGCTCACAAGGTTCAAGAGAGATTCCTTGTGCTGAAAACCATGAGACGATGGATGTAACGAACTTTGGAAGGGAAGAGAAAATTATAACTATGGACAATGAGAGCAACTCCAAGGTAAGAAATTCTCCTCTTTCAGAACAACGTTCATCCACCTCTGATGCACTAGATGATTATGAGAATGAGCTTCGTCAAGAACTAAGATGGCTCAAAGCTACATATCAAATGCAGTTGAGGGGGATTAGGGATCAACAGCTAGGAGTAGCTTCAAGCCTAAGTCCGGTTTCTGATCACTCGGAGCATAGGGAACCTAATGGGTCTTTAATATCTTTCCTTTCACCCAAGCGGGTGAAAGAAAAGAAAAGACCTTACCTAATATCCTCATCTCCTGGGAAGCCTTTCAATTCATATTTTCCAGTAGATGCTGAAAAGAAACATTTGGAAAATTCAAGTGTCCGGAATTGTGAGGCAATCGACGGGGCTTACAGTCCAGAACAAATCATGACTGCTAAGAGTTTCTACACTGGAGCATTGCTTCCTCAGTCTCTTCATAGAGCAACTTCTCTACCAGTGGATGCTATAGATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009987 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048511 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OSR1_C Pkinase

Protein Analysis

733

Amino Acids

83.5

Weight (kDa)

5.2

Isoelectric Point (pI)

46.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	27 - 281	1.4e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	27 - 276	2.1e-33	Protein tyrosine and serine/threonine kinase
OSR1_C	PF12202	376 - 431	3.1e-06	Oxidative-stress-responsive kinase 1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001186)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04910 AT3G04910 AT3G04910 AT5G28080 AT5G28080 AT5G28080 AT5G28080 AT5G28080 AT5G28080 AT5G28080 AT5G28080
fragaria_vesca	FvH4_4g15470 FvH4_4g15470 FvH4_4g15470 FvH4_4g15470 FvH4_4g15470 FvH4_4g15470 FvH4_4g15470 FvH4_6g03470 FvH4_6g03470
malus_domestica	MD04G1220500.v1.1 MD12G1236900.v1.1 MD13G1192500.v1.1 MD16G1193000.v1.1
prunus_persica	Prupe.1G013100_v2.0.a1 Prupe.6G339500_v2.0.a1 Prupe.6G339500_v2.0.a1 Prupe.6G339500_v2.0.a1 Prupe.6G339500_v2.0.a1 Prupe.6G339500_v2.0.a1 Prupe.6G339500_v2.0.a1
pyrus_communis	pycom04g19520 pycom12g21800 pycom13g16490 pycom16g16300
rosa_chinensis	RchiOBHm_Chr3g0451971 RchiOBHm_Chr4g0416321
rosa_laevigata	RLG00000007995 RLG00000025633
rosa_multiflora	Rmu_sc0001145.1_g000025 Rmu_sc0006436.1_g000001
rosa_roxburghii	Rroxscaffold_164G00436150 Rroxscaffold_5G00360170 Rroxscaffold_6G00429140
rosa_rugosa	Rorug02G0637900 Rorug04G0140700 Rorug04G0140700
rosa_samantha	Rh3AG039500 Rh3BG040900 Rh3CG039400 Rh3DG040100 Rh4AG202900 Rh4BG200300 Rh4CG214500 Rh4DG200200
rosa_wichuraiana	Rw3G002970 Rw4G017170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1700
AccII	CGCG	1 cut(s)	216
AccIII	TCCGGA	1 cut(s)	2067
AciI	CCGC	3 cut(s)	214, 1159, 1957
AclI	AACGTT	1 cut(s)	1756
AclWI	GGATC	7 cut(s)	47, 462, 749, 900, 1471, 1522, 1866
AcoI	YGGCCR	1 cut(s)	1480
AcsI	RAATTY	6 cut(s)	84, 219, 399, 572, 1735, 2056
AcuI	CTGAAG	4 cut(s)	213, 827, 1430, 1515
AfaI	GTAC	4 cut(s)	331, 1305, 1351, 1577
AfiI	CCNNNNNNNGG	5 cut(s)	917, 932, 1535, 1587, 1891
AjnI	CCWGG	3 cut(s)	1324, 1420, 1999
AjuI	GAANNNNNNNTTGG	2 cut(s)	489, 521
Alw26I	GTCTC	2 cut(s)	1652, 2160
AlwI	GGATC	7 cut(s)	47, 462, 749, 900, 1471, 1522, 1866
Aor13HI	TCCGGA	1 cut(s)	2067
AoxI	GGCC	5 cut(s)	517, 872, 908, 1156, 1480
ApeKI	GCWGC	4 cut(s)	524, 763, 1295, 1469
ApoI	RAATTY	6 cut(s)	84, 219, 399, 572, 1735, 2056
AseI	ATTAAT	1 cut(s)	300
Asp700I	GAANNNNTTC	1 cut(s)	2009
AspS9I	GGNCC	4 cut(s)	908, 1322, 1538, 1604
AsuHPI	GGTGA	7 cut(s)	301, 506, 521, 1298, 1401, 1941, 1972
AvaII	GGWCC	3 cut(s)	1322, 1538, 1604
AxyI	CCTNAGG	1 cut(s)	585
BanII	GRGCYC	1 cut(s)	1594
BbsI	GAAGAC	2 cut(s)	201, 1119
BbvI	GCAGC	4 cut(s)	511, 750, 1282, 1456
BccI	CCATC	9 cut(s)	646, 1023, 1112, 1277, 1312, 1559, 1595, 1657, 1809
BceAI	ACGGC	2 cut(s)	512, 1218
BciT130I	CCWGG	3 cut(s)	1326, 1422, 2001
BclI	TGATCA	1 cut(s)	1900
BcoDI	GTCTC	2 cut(s)	1652, 2160
BfaI	CTAG	2 cut(s)	1778, 1868
BfmI	CTRYAG	2 cut(s)	1218, 2190
BisI	GCNGC	5 cut(s)	525, 764, 1159, 1296, 1470
BlpI	GCTNAGC	2 cut(s)	787, 1233
BlsI	GCNGC	5 cut(s)	526, 765, 1160, 1297, 1471
Bme1390I	CCNGG	3 cut(s)	1326, 1422, 2001
Bme18I	GGWCC	3 cut(s)	1322, 1538, 1604
BmgT120I	GGNCC	4 cut(s)	908, 1322, 1538, 1604
BmiI	GGNNCC	8 cut(s)	158, 188, 488, 582, 1323, 1390, 1606, 1920
BmrFI	CCNGG	3 cut(s)	1326, 1422, 2001
BmsI	GCATC	9 cut(s)	651, 800, 806, 1131, 1170, 1415, 1762, 2023, 2176
BpiI	GAAGAC	2 cut(s)	201, 1119
BplI	GAGNNNNNCTC	2 cut(s)	1706, 1738
BpmI	CTGGAG	2 cut(s)	954, 2157
Bpu10I	CCTNAGC	2 cut(s)	759, 816
Bpu1102I	GCTNAGC	2 cut(s)	787, 1233
BpuEI	CTTGAG	4 cut(s)	215, 221, 443, 1041
BsaAI	YACGTR	1 cut(s)	1500
BsaBI	GATNNNNATC	2 cut(s)	641, 1014
BsaJI	CCNNGG	4 cut(s)	490, 1477, 1725, 2000
BsaWI	WCCGGW	2 cut(s)	1891, 2067
Bsc4I	CCNNNNNNNGG	5 cut(s)	917, 932, 1535, 1587, 1891
Bse118I	RCCGGY	1 cut(s)	1482
Bse1I	ACTGG	4 cut(s)	64, 2027, 2140, 2180
Bse21I	CCTNAGG	1 cut(s)	585
Bse3DI	GCAATG	2 cut(s)	970, 2141
Bse8I	GATNNNNATC	2 cut(s)	641, 1014
BseAI	TCCGGA	1 cut(s)	2067
BseBI	CCWGG	3 cut(s)	1326, 1422, 2001
BseDI	CCNNGG	4 cut(s)	490, 1477, 1725, 2000
BseGI	GGATG	7 cut(s)	642, 688, 1015, 1161, 1672, 1760, 2191
BseJI	GATNNNNATC	2 cut(s)	641, 1014
BseLI	CCNNNNNNNGG	5 cut(s)	917, 932, 1535, 1587, 1891
BseMI	GCAATG	2 cut(s)	970, 2141
BseMII	CTCAG	6 cut(s)	576, 750, 825, 1150, 1224, 2165
BseNI	ACTGG	4 cut(s)	64, 2027, 2140, 2180
BseRI	GAGGAG	3 cut(s)	111, 218, 1731
BseXI	GCAGC	4 cut(s)	511, 750, 1282, 1456
BsgI	GTGCAG	1 cut(s)	250
Bsh1236I	CGCG	1 cut(s)	216
BshFI	GGCC	5 cut(s)	519, 874, 910, 1158, 1482
BsiSI	CCGG	3 cut(s)	1483, 1892, 2068
BslFI	GGGAC	1 cut(s)	1335
BslI	CCNNNNNNNGG	5 cut(s)	917, 932, 1535, 1587, 1891
BsmAI	GTCTC	2 cut(s)	1652, 2160
BsmBI	CGTCTC	1 cut(s)	1652
BsmFI	GGGAC	1 cut(s)	1335
BsmI	GAATGC	2 cut(s)	686, 1069
BsnI	GGCC	5 cut(s)	519, 874, 910, 1158, 1482
Bsp1286I	GDGCHC	1 cut(s)	1594
Bsp13I	TCCGGA	1 cut(s)	2067
Bsp1407I	TGTACA	1 cut(s)	1349
Bsp1720I	GCTNAGC	2 cut(s)	787, 1233
Bsp19I	CCATGG	1 cut(s)	1477
BspACI	CCGC	3 cut(s)	214, 1159, 1957
BspANI	GGCC	5 cut(s)	519, 874, 910, 1158, 1482
BspCNI	CTCAG	6 cut(s)	577, 751, 824, 1149, 1225, 2164
BspEI	TCCGGA	1 cut(s)	2067
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	2 cut(s)	255, 2112
BspLI	GGNNCC	8 cut(s)	158, 188, 488, 582, 1323, 1390, 1606, 1920
BspPI	GGATC	7 cut(s)	47, 462, 749, 900, 1471, 1522, 1866
BsrDI	GCAATG	2 cut(s)	970, 2141
BsrFI	RCCGGY	1 cut(s)	1482
BsrGI	TGTACA	1 cut(s)	1349
BsrI	ACTGG	4 cut(s)	64, 2027, 2140, 2180
BssAI	RCCGGY	1 cut(s)	1482
BssECI	CCNNGG	4 cut(s)	490, 1477, 1725, 2000
BssT1I	CCWWGG	3 cut(s)	490, 1477, 1725
Bst2UI	CCWGG	3 cut(s)	1326, 1422, 2001
Bst4CI	ACNGT	4 cut(s)	112, 342, 947, 2099
Bst6I	CTCTTC	5 cut(s)	591, 1055, 1485, 1683, 2163
BstAUI	TGTACA	1 cut(s)	1349
BstBAI	YACGTR	1 cut(s)	1500
BstDSI	CCRYGG	1 cut(s)	1477
BstEII	GGTNACC	1 cut(s)	655
BstENI	CCTNNNNNAGG	1 cut(s)	1533
BstF5I	GGATG	7 cut(s)	642, 688, 1015, 1161, 1672, 1760, 2191
BstFNI	CGCG	1 cut(s)	216
BstMAI	GTCTC	2 cut(s)	1652, 2160
BstMWI	GCNNNNNNNGC	1 cut(s)	960
BstNI	CCWGG	3 cut(s)	1326, 1422, 2001
BstPI	GGTNACC	1 cut(s)	655
BstSCI	CCNGG	3 cut(s)	1324, 1420, 1999
BstSFI	CTRYAG	2 cut(s)	1218, 2190
BstSNI	TACGTA	1 cut(s)	1500
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	4 cut(s)	511, 750, 1282, 1456
BstV2I	GAAGAC	2 cut(s)	201, 1119
BstX2I	RGATCY	4 cut(s)	454, 754, 892, 1463
BstXI	CCANNNNNNTGG	1 cut(s)	1565
BstYI	RGATCY	4 cut(s)	454, 754, 892, 1463
Bsu36I	CCTNAGG	1 cut(s)	585
BsuRI	GGCC	5 cut(s)	519, 874, 910, 1158, 1482
BtgI	CCRYGG	1 cut(s)	1477
BtsCI	GGATG	7 cut(s)	642, 688, 1015, 1161, 1672, 1760, 2191
BtsI	GCAGTG	1 cut(s)	384
BtsIMutI	CAGTG	4 cut(s)	384, 1454, 2133, 2187
CciI	TCATGA	2 cut(s)	255, 2112
Cfr10I	RCCGGY	1 cut(s)	1482
Cfr13I	GGNCC	4 cut(s)	908, 1322, 1538, 1604
CsiI	ACCWGGT	1 cut(s)	1324
Csp6I	GTAC	4 cut(s)	330, 1304, 1350, 1576
CviAII	CATG	9 cut(s)	153, 256, 431, 545, 577, 1460, 1478, 1655, 2113
CviQI	GTAC	4 cut(s)	330, 1304, 1350, 1576
EaeI	YGGCCR	1 cut(s)	1480
Eam1104I	CTCTTC	5 cut(s)	591, 1055, 1485, 1683, 2163
EarI	CTCTTC	5 cut(s)	591, 1055, 1485, 1683, 2163
Eco105I	TACGTA	1 cut(s)	1500
Eco130I	CCWWGG	3 cut(s)	490, 1477, 1725
Eco24I	GRGCYC	1 cut(s)	1594
Eco32I	GATATC	2 cut(s)	1243, 1585
Eco47I	GGWCC	3 cut(s)	1322, 1538, 1604
Eco57I	CTGAAG	4 cut(s)	213, 827, 1430, 1515
Eco81I	CCTNAGG	1 cut(s)	585
Eco91I	GGTNACC	1 cut(s)	655
EcoNI	CCTNNNNNAGG	1 cut(s)	1533
EcoO109I	RGGNCCY	1 cut(s)	1322
EcoO65I	GGTNACC	1 cut(s)	655
EcoRI	GAATTC	1 cut(s)	572
EcoRII	CCWGG	3 cut(s)	1324, 1420, 1999
EcoRV	GATATC	2 cut(s)	1243, 1585
EcoT14I	CCWWGG	3 cut(s)	490, 1477, 1725
EcoT22I	ATGCAT	1 cut(s)	1408
EcoT38I	GRGCYC	1 cut(s)	1594
ErhI	CCWWGG	3 cut(s)	490, 1477, 1725
Esp3I	CGTCTC	1 cut(s)	1652
FaeI	CATG	9 cut(s)	156, 259, 434, 548, 580, 1463, 1481, 1658, 2116
FalI	AAGNNNNNCTT	2 cut(s)	153, 185
FaqI	GGGAC	1 cut(s)	1335
FatI	CATG	9 cut(s)	152, 255, 430, 544, 576, 1459, 1477, 1654, 2112
FauI	CCCGC	1 cut(s)	1950
FauNDI	CATATG	1 cut(s)	1384
FbaI	TGATCA	1 cut(s)	1900
Fnu4HI	GCNGC	5 cut(s)	525, 764, 1159, 1296, 1470
FokI	GGATG	7 cut(s)	649, 675, 1002, 1148, 1679, 1747, 2198
FriOI	GRGCYC	1 cut(s)	1594
Fsp4HI	GCNGC	5 cut(s)	525, 764, 1159, 1296, 1470
FspBI	CTAG	2 cut(s)	1778, 1868
GluI	GCNGC	5 cut(s)	525, 764, 1159, 1296, 1470
GsuI	CTGGAG	2 cut(s)	954, 2157
HaeIII	GGCC	5 cut(s)	519, 874, 910, 1158, 1482
HapII	CCGG	3 cut(s)	1483, 1892, 2068
Hin1II	CATG	9 cut(s)	156, 259, 434, 548, 580, 1463, 1481, 1658, 2116
HincII	GTYRAC	2 cut(s)	367, 619
HindII	GTYRAC	2 cut(s)	367, 619
HindIII	AAGCTT	1 cut(s)	167
HinfI	GANTC	3 cut(s)	445, 1610, 1636
HpaI	GTTAAC	1 cut(s)	367
HpaII	CCGG	3 cut(s)	1483, 1892, 2068
HphI	GGTGA	7 cut(s)	301, 506, 521, 1298, 1401, 1941, 1972
Hpy166II	GTNNAC	4 cut(s)	321, 367, 619, 1541
Hpy8I	GTNNAC	4 cut(s)	321, 367, 619, 1541
Hpy99I	CGWCG	2 cut(s)	1107, 2090
HpyAV	CCTTC	6 cut(s)	131, 1148, 1505, 1529, 1539, 1677
HpyCH4III	ACNGT	4 cut(s)	112, 342, 947, 2099
HpyCH4IV	ACGT	2 cut(s)	1499, 1756
HpyF10VI	GCNNNNNNNGC	1 cut(s)	960
HpySE526I	ACGT	2 cut(s)	1499, 1756
Hsp92II	CATG	9 cut(s)	156, 259, 434, 548, 580, 1463, 1481, 1658, 2116
Kpn2I	TCCGGA	1 cut(s)	2067
Ksp22I	TGATCA	1 cut(s)	1900
KspAI	GTTAAC	1 cut(s)	367
LmnI	GCTCC	5 cut(s)	98, 586, 820, 1909, 2138
Lsp1109I	GCAGC	4 cut(s)	511, 750, 1282, 1456
LweI	GCATC	9 cut(s)	651, 800, 806, 1131, 1170, 1415, 1762, 2023, 2176
MabI	ACCWGGT	1 cut(s)	1324
MaeI	CTAG	2 cut(s)	1778, 1868
MaeII	ACGT	2 cut(s)	1499, 1756
MaeIII	GTNAC	4 cut(s)	307, 464, 655, 1669
MflI	RGATCY	4 cut(s)	454, 754, 892, 1463
MhlI	GDGCHC	1 cut(s)	1594
MmeI	TCCRAC	1 cut(s)	541
Mph1103I	ATGCAT	1 cut(s)	1408
MroI	TCCGGA	1 cut(s)	2067
MroXI	GAANNNNTTC	1 cut(s)	2009
MseI	TTAA	9 cut(s)	12, 239, 300, 366, 414, 1130, 1428, 1934, 2200
MslI	CAYNNNNRTG	4 cut(s)	314, 429, 1020, 1563
MspI	CCGG	3 cut(s)	1483, 1892, 2068
MspR9I	CCNGG	3 cut(s)	1326, 1422, 2001
Mva1269I	GAATGC	2 cut(s)	686, 1069
MvaI	CCWGG	3 cut(s)	1326, 1422, 2001
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	1 cut(s)	960
NcoI	CCATGG	1 cut(s)	1477
NdeI	CATATG	1 cut(s)	1384
NlaIII	CATG	9 cut(s)	156, 259, 434, 548, 580, 1463, 1481, 1658, 2116
NlaIV	GGNNCC	8 cut(s)	158, 188, 488, 582, 1323, 1390, 1606, 1920
NmuCI	GTSAC	2 cut(s)	307, 464
NsiI	ATGCAT	1 cut(s)	1408
PagI	TCATGA	2 cut(s)	255, 2112
PctI	GAATGC	2 cut(s)	686, 1069
PdmI	GAANNNNTTC	1 cut(s)	2009
PfeI	GAWTC	3 cut(s)	445, 1610, 1636
PkrI	GCNGC	5 cut(s)	526, 765, 1160, 1297, 1471
Ppu21I	YACGTR	1 cut(s)	1500
PpuMI	RGGWCCY	1 cut(s)	1322
PshBI	ATTAAT	1 cut(s)	300
PsiI	TTATAA	1 cut(s)	1700
Psp1406I	AACGTT	1 cut(s)	1756
Psp5II	RGGWCCY	1 cut(s)	1322
Psp6I	CCWGG	3 cut(s)	1324, 1420, 1999
PspEI	GGTNACC	1 cut(s)	655
PspGI	CCWGG	3 cut(s)	1324, 1420, 1999
PspN4I	GGNNCC	8 cut(s)	158, 188, 488, 582, 1323, 1390, 1606, 1920
PspPI	GGNCC	4 cut(s)	908, 1322, 1538, 1604
PspPPI	RGGWCCY	1 cut(s)	1322
PsuI	RGATCY	4 cut(s)	454, 754, 892, 1463
RsaI	GTAC	4 cut(s)	331, 1305, 1351, 1577
RsaNI	GTAC	4 cut(s)	330, 1304, 1350, 1576
RseI	CAYNNNNRTG	4 cut(s)	314, 429, 1020, 1563
SaqAI	TTAA	9 cut(s)	12, 239, 300, 366, 414, 1130, 1428, 1934, 2200
SatI	GCNGC	5 cut(s)	525, 764, 1159, 1296, 1470
Sau96I	GGNCC	4 cut(s)	908, 1322, 1538, 1604
ScrFI	CCNGG	3 cut(s)	1326, 1422, 2001
SduI	GDGCHC	1 cut(s)	1594
SexAI	ACCWGGT	1 cut(s)	1324
SfaNI	GCATC	9 cut(s)	651, 800, 806, 1131, 1170, 1415, 1762, 2023, 2176
SfcI	CTRYAG	2 cut(s)	1218, 2190
SinI	GGWCC	3 cut(s)	1322, 1538, 1604
SmiMI	CAYNNNNRTG	4 cut(s)	314, 429, 1020, 1563
SmlI	CTYRAG	4 cut(s)	200, 230, 458, 1056
SmoI	CTYRAG	4 cut(s)	200, 230, 458, 1056
SnaBI	TACGTA	1 cut(s)	1500
SsiI	CCGC	3 cut(s)	214, 1159, 1957
SspMI	CTAG	2 cut(s)	1778, 1868
StyD4I	CCNGG	3 cut(s)	1324, 1420, 1999
StyI	CCWWGG	3 cut(s)	490, 1477, 1725
TaaI	ACNGT	4 cut(s)	112, 342, 947, 2099
TaiI	ACGT	2 cut(s)	1502, 1759
TaqI	TCGA	2 cut(s)	1553, 2085
TatI	WGTACW	1 cut(s)	1349
TauI	GCSGC	1 cut(s)	1161
TfiI	GAWTC	3 cut(s)	445, 1610, 1636
Tru1I	TTAA	9 cut(s)	12, 239, 300, 366, 414, 1130, 1428, 1934, 2200
Tru9I	TTAA	9 cut(s)	12, 239, 300, 366, 414, 1130, 1428, 1934, 2200
TscAI	CASTG	4 cut(s)	384, 1454, 2140, 2187
TseFI	GTSAC	2 cut(s)	307, 464
TseI	GCWGC	4 cut(s)	524, 763, 1295, 1469
Tsp45I	GTSAC	2 cut(s)	307, 464
TspGWI	ACGGA	1 cut(s)	1120
TspRI	CASTG	4 cut(s)	384, 1454, 2140, 2187
VpaK11BI	GGWCC	3 cut(s)	1322, 1538, 1604
VspI	ATTAAT	1 cut(s)	300
XagI	CCTNNNNNAGG	1 cut(s)	1533
XapI	RAATTY	6 cut(s)	84, 219, 399, 572, 1735, 2056
XmnI	GAANNNNTTC	1 cut(s)	2009
XspI	CTAG	2 cut(s)	1778, 1868
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.