RH3DG040100

Serine threonine-protein kinase

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG040100.1

Sequence Viewer

Length: 2196 bp
ATGAATGGTCTCTCACATCTTGAACCGGATTACTCTGAGTTTGTTGAAGTAGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTAGGCAAAGGAGCTTCAAAGACAGTAGCATTTGATGAGTATGATGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTTTATGATTTTCTTCAAAGTCCTGAAGATCTTGAGAGGCTGTACTGTGAAATTCACCTCCTCAAGACACTGAAGCACAAGAACATTATGAAGTTCTACACTTCTTGGGTTGATACTTCAAAAAGAAACATCAATTTTGTCACTGAAATGTTCACTTCTGGGACTCTTAAACAGTACAGGCTAAAGCACAAGAGAGTTAACATCAGAGCTGTGAAGCATTGGTGTAGGCAGATCTTGGGAGGGCTTTTGTATCTGCATAGCCGTGACCCTCCTGTGATTCATAGAGATCTCAAATGTGACAACATCTTTGTTAATGGAAATCAAGGGGAAGTGAAGATTGGTGATCTTGGTTTAGCAGCGATCTTAAGGAAATCACAACATGCTGCCCACTGTGTTGGGACACCAGAGTTCATGGCACCAGAAGTGTATGAAGAGGCATATAATGAGTTAGTTGACATATATTCGTTTGGGATGTGCGTTTTGGAAATGGTGACTTTTGAATATCCTTATAGTGAATGCACTCATCCTGCTCAGATCTACAAGAAAGTTGTATCAGGGAAAAAACCAGATGCTTTGTACAAAGTGAAAGATCCGGAAGTAAGGAAGTTTGTTGAGAAATGCTTGGCAACTGCATCTGTGAGGCACTCCGCAATTGAGCTTTTGAACGATGATTTTCTCCGAATAGATGAAGGTGAATATGATTTGAGACCAGTGAATTACACCAGGCAGCTTGATGACATTGGTCCTCTTGTAAGGCAGCCTCTTTACGAGGTTCATCAAAGCAACAGTTCGTTTAGTAATGAATACTCGAATGGTTATGGCTTCGATTCCCAAAACGAATGGGGTTATCATCCTTTTGAGGTTGAATCAAGTGGCATAGAACTCTTTGAGCATCATGATGATGATGAACATGGTGAAGATGTGGACATAAGTATTAGAGGGAAGAGAAAAGAAGAAGATGGTAGCATCATTCTGAGACTTAGAATTGCAGATAAAGAAGGACATATTAGGAAGATTTATTTCCCATTTGACATTGAGACAGACACAGCACTAAGTGTTGCAACTGAAATGGTGGCAGAGTTGGATATCACTGATCATGATGTAACCGAAATAGCAGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGATTGGCAGTCGGGGCCAGGAATAGTGGAATCACCACGTTTTTCCAATCAAAAATTTTGTCACAATTGTGTATCCAACCACACCTCTAGTGGTTCCTTCATGGAGTTTCTGTCTAATAACCTAGGAGCTACTCAAGATTGTACGCATGGATGTGCTTCAATGCATGGTCGTTTTGAGGAGATTACATATCAAGAAGATGAGTCAAAGCATCGTGTGACGGAGGATATACCAAATGAATCAAGCCAATCAGACTGCCTACATTACCAAGAAATCTGGGGACAGCATGAGAGTCGTGAGCTTAGTTCAGTGGGCTCTGGACAGAGCCATTCAGATGAAGAATATGAAAAAATGAATCAGTTAGTCACAGTCATGCAGGATCTTAAATTGGACAACACCATCGCTTCCGATGCAACAAATTCTCTCCGGGATTTATCCGGTTCACATCCCTTTTCCACTGTCCCTTCGATATACTGTGATCTCTCAGACAATTCTGAGCATGAAATTCAGAAGGAATTGAGGTGGCTCAAAGCAAAGCACCAGATTGAGTTGAGGGAGCTTAGAGATCAGCAGTTAGGACTTGTCTCAAAATCTTCAAACAAAGAACACGGGAGAGACAATGGGAGCTTATCATGTCTGGTATCAAACACCATGAAAGGGAACAACTATGACAGAAATTCAACTTTTAATTGCCTTCCTAATCCTAATAAGAGCTGCCCCAGTTCGGAAACCCAAAGGGTCCGAAAATGTGAGGCGATATTGGAGTGTCCAGATGCAGAAGAGGATGATGTGGGTACTGCCAACAGTTTCTACGCCCAATCACAGCTGCTTCCACACTCTCTTTGCAGGACAGTCTCTCTCCCCGTTGATGCTGTTGATTCGTAA

Protein Analysis

731

Amino Acids

83.16

Weight (kDa)

5.03

Isoelectric Point (pI)

48.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 27 - 279 1.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 30 - 265 2.8e-31 Protein tyrosine and serine/threonine kinase
OSR1_C PF12202 378 - 433 3.6e-06 Oxidative-stress-responsive kinase 1 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1309
AccB1I GGYRCC 2 cut(s) 577, 1309
AccIII TCCGGA 1 cut(s) 754
AciI CCGC 1 cut(s) 810
AclWI GGATC 3 cut(s) 47, 746, 1698
AcsI RAATTY 5 cut(s) 213, 1367, 1729, 1815, 1987
AcuI CTGAAG 2 cut(s) 207, 254
AdeI CACNNNGTG 1 cut(s) 1217
AfaI GTAC 6 cut(s) 206, 338, 740, 1311, 1456, 2107
AfiI CCNNNNNNNGG 2 cut(s) 1968, 2035
AflII CTTAAG 1 cut(s) 526
AjnI CCWGG 3 cut(s) 153, 884, 1330
AjuI GAANNNNNNNTTGG 2 cut(s) 483, 515
AleI CACNNNNGTG 1 cut(s) 1380
Alw26I GTCTC 7 cut(s) 14, 862, 1132, 1193, 1900, 1920, 2170
AlwI GGATC 3 cut(s) 47, 746, 1698
Aor13HI TCCGGA 1 cut(s) 754
AoxI GGCC 1 cut(s) 1328
ApeKI GCWGC 6 cut(s) 518, 545, 889, 919, 2025, 2137
ApoI RAATTY 5 cut(s) 213, 1367, 1729, 1815, 1987
ArsI GACNNNNNNTTYG 4 cut(s) 452, 484, 1357, 1389
Asp718I GGTACC 1 cut(s) 1309
AspA2I CCTAGG 2 cut(s) 88, 1435
AspS9I GGNCC 3 cut(s) 905, 1328, 2050
AsuC2I CCSGG 1 cut(s) 1739
AsuHPI GGTGA 6 cut(s) 209, 515, 664, 866, 1088, 1338
AvaII GGWCC 2 cut(s) 905, 2050
AvrII CCTAGG 2 cut(s) 88, 1435
BanI GGYRCC 2 cut(s) 577, 1309
BanII GRGCYC 1 cut(s) 1628
BbvI GCAGC 6 cut(s) 530, 532, 901, 931, 2012, 2124
BccI CCATC 4 cut(s) 125, 1115, 1283, 1718
BceAI ACGGC 1 cut(s) 408
BcgI CGANNNNNNTGC 2 cut(s) 1586, 1620
BciT130I CCWGG 3 cut(s) 155, 886, 1332
BciVI GTATCC 1 cut(s) 1396
BclI TGATCA 1 cut(s) 1255
BcnI CCSGG 1 cut(s) 1739
BcoDI GTCTC 7 cut(s) 14, 862, 1132, 1193, 1900, 1920, 2170
BfaI CTAG 3 cut(s) 89, 1401, 1436
BfrI CTTAAG 1 cut(s) 526
BfuI GTATCC 1 cut(s) 1396
BglII AGATCT 4 cut(s) 190, 393, 448, 696
BisI GCNGC 6 cut(s) 519, 546, 890, 920, 2026, 2138
BlnI CCTAGG 2 cut(s) 88, 1435
BlsI GCNGC 6 cut(s) 520, 547, 891, 921, 2027, 2139
Bme1390I CCNGG 4 cut(s) 155, 886, 1332, 1739
Bme18I GGWCC 2 cut(s) 905, 2050
BmgT120I GGNCC 3 cut(s) 905, 1328, 2050
BmiI GGNNCC 6 cut(s) 152, 579, 1311, 1329, 1408, 2051
BmrFI CCNGG 4 cut(s) 155, 886, 1332, 1739
BmrI ACTGGG 1 cut(s) 2025
BmsI GCATC 8 cut(s) 721, 803, 1063, 1137, 1531, 1711, 2074, 2170
BmuI ACTGGG 1 cut(s) 2025
BoxI GACNNNNGTC 1 cut(s) 903
BpuEI CTTGAG 3 cut(s) 209, 215, 1431
BpuMI CCSGG 1 cut(s) 1739
BsaI GGTCTC 2 cut(s) 14, 862
BsaJI CCNNGG 3 cut(s) 88, 1305, 1435
BsaWI WCCGGW 3 cut(s) 25, 754, 1748
BsaXI ACNNNNNCTCC 2 cut(s) 1409, 1439
Bsc4I CCNNNNNNNGG 2 cut(s) 1968, 2035
Bse1I ACTGG 3 cut(s) 64, 872, 2031
BseAI TCCGGA 1 cut(s) 754
BseBI CCWGG 3 cut(s) 155, 886, 1332
BseDI CCNNGG 3 cut(s) 88, 1305, 1435
BseGI GGATG 6 cut(s) 639, 685, 1012, 1469, 1756, 2101
BseLI CCNNNNNNNGG 2 cut(s) 1968, 2035
BseMII CTCAG 5 cut(s) 27, 707, 1127, 1797, 1809
BseNI ACTGG 3 cut(s) 64, 872, 2031
BseRI GAGGAG 2 cut(s) 212, 1505
BseXI GCAGC 6 cut(s) 530, 532, 901, 931, 2012, 2124
BshFI GGCC 1 cut(s) 1330
BshNI GGYRCC 2 cut(s) 577, 1309
BsiSI CCGG 4 cut(s) 26, 755, 1738, 1749
BslFI GGGAC 4 cut(s) 337, 574, 1605, 1757
BslI CCNNNNNNNGG 2 cut(s) 1968, 2035
BsmAI GTCTC 7 cut(s) 14, 862, 1132, 1193, 1900, 1920, 2170
BsmFI GGGAC 4 cut(s) 337, 574, 1605, 1757
BsmI GAATGC 1 cut(s) 683
BsnI GGCC 1 cut(s) 1330
Bso31I GGTCTC 2 cut(s) 14, 862
Bsp1286I GDGCHC 1 cut(s) 1628
Bsp13I TCCGGA 1 cut(s) 754
Bsp1407I TGTACA 1 cut(s) 738
BspACI CCGC 1 cut(s) 810
BspANI GGCC 1 cut(s) 1330
BspCNI CTCAG 5 cut(s) 28, 706, 1128, 1798, 1808
BspEI TCCGGA 1 cut(s) 754
BspHI TCATGA 2 cut(s) 1057, 1258
BspLI GGNNCC 6 cut(s) 152, 579, 1311, 1329, 1408, 2051
BspPI GGATC 3 cut(s) 47, 746, 1698
BspT107I GGYRCC 2 cut(s) 577, 1309
BspTI CTTAAG 1 cut(s) 526
BspTNI GGTCTC 2 cut(s) 14, 862
BsrGI TGTACA 1 cut(s) 738
BsrI ACTGG 3 cut(s) 64, 872, 2031
BssECI CCNNGG 3 cut(s) 88, 1305, 1435
BssT1I CCWWGG 3 cut(s) 88, 1305, 1435
Bst2UI CCWGG 3 cut(s) 155, 886, 1332
Bst6I CTCTTC 3 cut(s) 588, 1100, 2085
BstAFI CTTAAG 1 cut(s) 526
BstAUI TGTACA 1 cut(s) 738
BstDEI CTNAG 9 cut(s) 36, 693, 1136, 1142, 1214, 1613, 1795, 1806, 1871
BstF5I GGATG 6 cut(s) 639, 685, 1012, 1469, 1756, 2101
BstMAI GTCTC 7 cut(s) 14, 862, 1132, 1193, 1900, 1920, 2170
BstMWI GCNNNNNNNGC 3 cut(s) 69, 1327, 1721
BstNI CCWGG 3 cut(s) 155, 886, 1332
BstNSI RCATGY 1 cut(s) 545
BstPAI GACNNNNGTC 1 cut(s) 903
BstSCI CCNGG 4 cut(s) 153, 884, 1330, 1737
BstV1I GCAGC 6 cut(s) 530, 532, 901, 931, 2012, 2124
BstX2I RGATCY 7 cut(s) 52, 190, 393, 448, 696, 751, 1690
BstXI CCANNNNNNTGG 1 cut(s) 557
BstYI RGATCY 7 cut(s) 52, 190, 393, 448, 696, 751, 1690
BsuI GTATCC 1 cut(s) 1396
BsuRI GGCC 1 cut(s) 1330
BtgZI GCGATG 1 cut(s) 1696
BtsCI GGATG 6 cut(s) 639, 685, 1012, 1469, 1756, 2101
BtsIMutI CAGTG 7 cut(s) 230, 303, 550, 879, 1251, 1626, 1767
CciI TCATGA 2 cut(s) 1057, 1258
Cfr13I GGNCC 3 cut(s) 905, 1328, 2050
CsiI ACCWGGT 1 cut(s) 153
Csp6I GTAC 6 cut(s) 205, 337, 739, 1310, 1455, 2106
CviQI GTAC 6 cut(s) 205, 337, 739, 1310, 1455, 2106
DdeI CTNAG 9 cut(s) 36, 693, 1136, 1142, 1214, 1613, 1795, 1806, 1871
DraIII CACNNNGTG 1 cut(s) 1217
Eam1104I CTCTTC 3 cut(s) 588, 1100, 2085
EarI CTCTTC 3 cut(s) 588, 1100, 2085
Eco130I CCWWGG 3 cut(s) 88, 1305, 1435
Eco24I GRGCYC 1 cut(s) 1628
Eco31I GGTCTC 2 cut(s) 14, 862
Eco32I GATATC 1 cut(s) 1249
Eco47I GGWCC 2 cut(s) 905, 2050
Eco57I CTGAAG 2 cut(s) 207, 254
EcoRII CCWGG 3 cut(s) 153, 884, 1330
EcoRV GATATC 1 cut(s) 1249
EcoT14I CCWWGG 3 cut(s) 88, 1305, 1435
EcoT22I ATGCAT 1 cut(s) 1479
EcoT38I GRGCYC 1 cut(s) 1628
ErhI CCWWGG 3 cut(s) 88, 1305, 1435
FaqI GGGAC 4 cut(s) 337, 574, 1605, 1757
FbaI TGATCA 1 cut(s) 1255
Fnu4HI GCNGC 6 cut(s) 519, 546, 890, 920, 2026, 2138
FokI GGATG 6 cut(s) 646, 672, 999, 1476, 1743, 2108
FriOI GRGCYC 1 cut(s) 1628
Fsp4HI GCNGC 6 cut(s) 519, 546, 890, 920, 2026, 2138
FspBI CTAG 3 cut(s) 89, 1401, 1436
GluI GCNGC 6 cut(s) 519, 546, 890, 920, 2026, 2138
HaeIII GGCC 1 cut(s) 1330
HapII CCGG 4 cut(s) 26, 755, 1738, 1749
HincII GTYRAC 2 cut(s) 361, 616
HindII GTYRAC 2 cut(s) 361, 616
HindIII AAGCTT 1 cut(s) 161
HpaI GTTAAC 1 cut(s) 361
HpaII CCGG 4 cut(s) 26, 755, 1738, 1749
HphI GGTGA 6 cut(s) 209, 515, 664, 866, 1088, 1338
Hpy166II GTNNAC 5 cut(s) 315, 361, 616, 1087, 1754
Hpy8I GTNNAC 5 cut(s) 315, 361, 616, 1087, 1754
HpyAV CCTTC 6 cut(s) 845, 1154, 1420, 1785, 1816, 2015
HpyCH4IV ACGT 1 cut(s) 1351
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 1327, 1721
HpyF3I CTNAG 9 cut(s) 36, 693, 1136, 1142, 1214, 1613, 1795, 1806, 1871
HpySE526I ACGT 1 cut(s) 1351
Kpn2I TCCGGA 1 cut(s) 754
KpnI GGTACC 1 cut(s) 1313
Ksp22I TGATCA 1 cut(s) 1255
KspAI GTTAAC 1 cut(s) 361
LmnI GCTCC 4 cut(s) 98, 1439, 1867, 1935
Lsp1109I GCAGC 6 cut(s) 530, 532, 901, 931, 2012, 2124
LweI GCATC 8 cut(s) 721, 803, 1063, 1137, 1531, 1711, 2074, 2170
MabI ACCWGGT 1 cut(s) 153
MaeI CTAG 3 cut(s) 89, 1401, 1436
MaeII ACGT 1 cut(s) 1351
MaeIII GTNAC 8 cut(s) 301, 425, 458, 652, 1264, 1373, 1528, 1675
MfeI CAATTG 2 cut(s) 813, 1378
MflI RGATCY 7 cut(s) 52, 190, 393, 448, 696, 751, 1690
MhlI GDGCHC 1 cut(s) 1628
MlyI GAGTC 3 cut(s) 319, 1523, 1612
MmeI TCCRAC 3 cut(s) 80, 1224, 1413
Mph1103I ATGCAT 1 cut(s) 1479
MroI TCCGGA 1 cut(s) 754
MseI TTAA 6 cut(s) 330, 360, 474, 527, 1695, 1998
MslI CAYNNNNRTG 8 cut(s) 308, 423, 1059, 1062, 1380, 1464, 1644, 1682
MspA1I CMGCKG 1 cut(s) 2137
MspCI CTTAAG 1 cut(s) 526
MspI CCGG 4 cut(s) 26, 755, 1738, 1749
MspR9I CCNGG 4 cut(s) 155, 886, 1332, 1739
MunI CAATTG 2 cut(s) 813, 1378
Mva1269I GAATGC 1 cut(s) 683
MvaI CCWGG 3 cut(s) 155, 886, 1332
MwoI GCNNNNNNNGC 3 cut(s) 69, 1327, 1721
NciI CCSGG 1 cut(s) 1739
NlaIV GGNNCC 6 cut(s) 152, 579, 1311, 1329, 1408, 2051
NmuCI GTSAC 7 cut(s) 301, 425, 458, 652, 1373, 1528, 1675
NsiI ATGCAT 1 cut(s) 1479
NspI RCATGY 1 cut(s) 545
OliI CACNNNNGTG 1 cut(s) 1380
PagI TCATGA 2 cut(s) 1057, 1258
PctI GAATGC 1 cut(s) 683
PfeI GAWTC 7 cut(s) 439, 989, 1028, 1343, 1550, 1666, 2189
PfoI TCCNGGA 1 cut(s) 1737
PkrI GCNGC 6 cut(s) 520, 547, 891, 921, 2027, 2139
PleI GAGTC 3 cut(s) 319, 1522, 1611
PpsI GAGTC 3 cut(s) 319, 1522, 1611
PshAI GACNNNNGTC 1 cut(s) 903
Psp6I CCWGG 3 cut(s) 153, 884, 1330
PspGI CCWGG 3 cut(s) 153, 884, 1330
PspN4I GGNNCC 6 cut(s) 152, 579, 1311, 1329, 1408, 2051
PspPI GGNCC 3 cut(s) 905, 1328, 2050
PsuI RGATCY 7 cut(s) 52, 190, 393, 448, 696, 751, 1690
PvuII CAGCTG 1 cut(s) 2137
RsaI GTAC 6 cut(s) 206, 338, 740, 1311, 1456, 2107
RsaNI GTAC 6 cut(s) 205, 337, 739, 1310, 1455, 2106
RseI CAYNNNNRTG 8 cut(s) 308, 423, 1059, 1062, 1380, 1464, 1644, 1682
SaqAI TTAA 6 cut(s) 330, 360, 474, 527, 1695, 1998
SatI GCNGC 6 cut(s) 519, 546, 890, 920, 2026, 2138
Sau96I GGNCC 3 cut(s) 905, 1328, 2050
SchI GAGTC 3 cut(s) 319, 1523, 1612
ScrFI CCNGG 4 cut(s) 155, 886, 1332, 1739
SduI GDGCHC 1 cut(s) 1628
SexAI ACCWGGT 1 cut(s) 153
SfaNI GCATC 8 cut(s) 721, 803, 1063, 1137, 1531, 1711, 2074, 2170
SinI GGWCC 2 cut(s) 905, 2050
SmiMI CAYNNNNRTG 8 cut(s) 308, 423, 1059, 1062, 1380, 1464, 1644, 1682
SmlI CTYRAG 4 cut(s) 194, 224, 526, 1446
SmoI CTYRAG 4 cut(s) 194, 224, 526, 1446
SsiI CCGC 1 cut(s) 810
SspMI CTAG 3 cut(s) 89, 1401, 1436
StyD4I CCNGG 4 cut(s) 153, 884, 1330, 1737
StyI CCWWGG 3 cut(s) 88, 1305, 1435
TaiI ACGT 1 cut(s) 1354
TaqI TCGA 3 cut(s) 971, 987, 1778
TatI WGTACW 3 cut(s) 204, 336, 738
TfiI GAWTC 7 cut(s) 439, 989, 1028, 1343, 1550, 1666, 2189
Tru1I TTAA 6 cut(s) 330, 360, 474, 527, 1695, 1998
Tru9I TTAA 6 cut(s) 330, 360, 474, 527, 1695, 1998
TscAI CASTG 7 cut(s) 237, 310, 557, 879, 1258, 1626, 1774
TseFI GTSAC 7 cut(s) 301, 425, 458, 652, 1373, 1528, 1675
TseI GCWGC 6 cut(s) 518, 545, 889, 919, 2025, 2137
Tsp45I GTSAC 7 cut(s) 301, 425, 458, 652, 1373, 1528, 1675
TspGWI ACGGA 1 cut(s) 1547
TspRI CASTG 7 cut(s) 237, 310, 557, 879, 1258, 1626, 1774
Vha464I CTTAAG 1 cut(s) 526
VpaK11BI GGWCC 2 cut(s) 905, 2050
XapI RAATTY 5 cut(s) 213, 1367, 1729, 1815, 1987
XceI RCATGY 1 cut(s) 545
XcmI CCANNNNNNNNNTGG 1 cut(s) 1400
XmaJI CCTAGG 2 cut(s) 88, 1435
XspI CTAG 3 cut(s) 89, 1401, 1436
Zsp2I ATGCAT 1 cut(s) 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.