Rh3BG040900

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
2625606 .. 2629657
4052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG040900.1

Sequence Viewer

Length: 1947 bp
ATGAAGTTCTACACTTCTTGGGTTGATACTTCAAAAAGAAACATCAATTTTGTCACTGAAATGTTCACTTCTGGGACTCTTAAACAGTACAGGCTAAAGCACAAGAGAGTTAACATCAGAGCTGTGAAGCATTGGTGTAGGCAGATCTTGGGAGGGCTTTTGTATCTGCATAGCCGTGACCCTCCTGTGATTCATAGAGATCTCAAATGTGACAACATCTTTGTTAATGGAAATCAAGGGGAAGTGAAGATTGGTGATCTTGGTTTAGCAGCGATCTTAAGGAAATCACAACATGCTGCCCACTGTGTTGGGACACCAGAGTTCATGGCACCAGAAGTGTATGAAGAGGCATATAATGAGTTAGTTGACATATATTCGTTTGGGATGTGCGTTTTGGAAATGGTGACTTTTGAATATCCTTATAGTGAATGCACTCATCCTGCTCAGATCTACAAGAAAGTTGTATCAGGGAAAAAACCAGATGCTTTGTACAAAGTGAAAGATCCGGAAGTAAGGAAGTTTGTTGAGAAATGCTTGGCAACTGCATCTGTGAGGCACTCCGCAATTGAGCTTTTGAACGATGATTTTCTCCGAATAGATGAAGGTGAATATGATTTGAGACCAGTGAATTACACCAGGCAGCTTGATGACATTGGTCCTCTTGTAAGGCAGCCTCTTTACGAGGTTCATCAAAGCAACAGTTCGTTTAGTAATGAATACTCGAATGGTTATGGCTTCGATTCCCAAAACGAATGGGGTTATCATCCTTTTGAGGTTGAATCAAGTGGCATAGAACTCTTTGAGCATCATGATGATGATGAACATGGTGAAGATGTGGACATAAGTATTAGAGGGAAGAGAAAAGAAGAAGATGGTAGCATCATTCTGAGACTTAGAATTGCAGATAAAGAAGGACATATTAGGAAGATTTATTTCCCATTTGACATTGAGACAGACACAGCACTAAGTGTTGCAACTGAAATGGTGGCAGAGTTGGATATCACTGATCATGATGTAACCGAAATAGCAGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGATTGGCAGTCGGGGCCAGGAATAGTGGAATCACCACGTTTTTCCAATCAAAAATTTTGTCACAATTGTGTATCCAACCACACCTCTAGTGGTTCCTTCATGGAGTTTCTGTCTAATAACCTAGGAGCTACTCAAGATTGTACGCATGGATGTGCTTCAATGCATGGTCGTTTTGAGGAGATTACATATCAAGAAGATGAGTCAAAGCATCGTGTGACGGAGGATATACCAAATGAATCAAGCCAATCAGACTGCCTACATTACCAAGAAATCTGGGGACAGCATGAGAGTCGTGAGCTTAGTTCAGTGGGCTCTGGACAGAGCCATTCAGATGAAGAATATGAAAAAATGAATCAGTTAGTCACAGTCATGCAGGATCTTAAATTGGACAACACCATCGCTTCCGATGCAACAAATTCTCTCCGGGATTTATCCGGTTCACATCCCTTTTCCACTGTCCCTTCGATATACTGTGATCTCTCAGACAATTCTGAGCATGAAATTCAGAAGGAATTGAGGTGGCTCAAAGCAAAGCACCAGATTGAGTTGAGGGAGCTTAGAGATCAGCAGTTAGGACTTGTCTCAAAATCTTCAAACAAAGAACACGGGAGAGACAATGGGAGCTTATCATGTCTGGTATCAAACACCATGAAAGGGAACAACTATGACAGAAATTCAACTTTTAATTGCCTTCCTAATCCTAATAAGAGCTGCCCCAGTTCGGAAACCCAAAGGGTCCGAAAATGTGAGGCGATATTGGAGTGTCCAGATGCAGAAGAGGATGATGTGGGTACTGCCAACAGTTTCTACGCCCAATCACAGCTGCTTCCACACTCTCTTTGCAGGACAGTCTCTCTCCCCGTTGATGCTGTTGATTCGTAA

Protein Analysis

648

Amino Acids

73.53

Weight (kDa)

5.05

Isoelectric Point (pI)

49.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 7 - 196 2.8e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 11 - 182 1.2e-24 Protein tyrosine and serine/threonine kinase
OSR1_C PF12202 295 - 350 3.1e-06 Oxidative-stress-responsive kinase 1 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1060
AccB1I GGYRCC 2 cut(s) 328, 1060
AccIII TCCGGA 1 cut(s) 505
AciI CCGC 1 cut(s) 561
AclWI GGATC 2 cut(s) 497, 1449
AcsI RAATTY 4 cut(s) 1118, 1480, 1566, 1738
AdeI CACNNNGTG 1 cut(s) 968
AfaI GTAC 5 cut(s) 89, 491, 1062, 1207, 1858
AfiI CCNNNNNNNGG 2 cut(s) 1719, 1786
AflII CTTAAG 1 cut(s) 277
AgsI TTSAA 7 cut(s) 33, 413, 577, 779, 1224, 1659, 1743
AjnI CCWGG 2 cut(s) 635, 1081
AjuI GAANNNNNNNTTGG 2 cut(s) 234, 266
AleI CACNNNNGTG 1 cut(s) 1131
AluBI AGCT 9 cut(s) 122, 571, 643, 1193, 1363, 1621, 1689, 1776, 1888
AluI AGCT 9 cut(s) 122, 571, 643, 1193, 1363, 1621, 1689, 1776, 1888
Alw26I GTCTC 6 cut(s) 613, 883, 944, 1651, 1671, 1921
AlwI GGATC 2 cut(s) 497, 1449
Aor13HI TCCGGA 1 cut(s) 505
AoxI GGCC 1 cut(s) 1079
ApeKI GCWGC 6 cut(s) 269, 296, 640, 670, 1776, 1888
ApoI RAATTY 4 cut(s) 1118, 1480, 1566, 1738
ArsI GACNNNNNNTTYG 4 cut(s) 203, 235, 1108, 1140
Asp718I GGTACC 1 cut(s) 1060
AspA2I CCTAGG 1 cut(s) 1186
AspS9I GGNCC 3 cut(s) 656, 1079, 1801
AsuC2I CCSGG 1 cut(s) 1490
AsuHPI GGTGA 5 cut(s) 266, 415, 617, 839, 1089
AvaII GGWCC 2 cut(s) 656, 1801
AvrII CCTAGG 1 cut(s) 1186
BanI GGYRCC 2 cut(s) 328, 1060
BanII GRGCYC 1 cut(s) 1379
BbvI GCAGC 6 cut(s) 281, 283, 652, 682, 1763, 1875
BccI CCATC 3 cut(s) 866, 1034, 1469
BceAI ACGGC 1 cut(s) 159
BcgI CGANNNNNNTGC 2 cut(s) 1337, 1371
BciT130I CCWGG 2 cut(s) 637, 1083
BciVI GTATCC 1 cut(s) 1147
BclI TGATCA 1 cut(s) 1006
BcnI CCSGG 1 cut(s) 1490
BcoDI GTCTC 6 cut(s) 613, 883, 944, 1651, 1671, 1921
BfaI CTAG 2 cut(s) 1152, 1187
BfrI CTTAAG 1 cut(s) 277
BfuI GTATCC 1 cut(s) 1147
BglII AGATCT 3 cut(s) 144, 199, 447
BisI GCNGC 6 cut(s) 270, 297, 641, 671, 1777, 1889
BlnI CCTAGG 1 cut(s) 1186
BlsI GCNGC 6 cut(s) 271, 298, 642, 672, 1778, 1890
Bme1390I CCNGG 3 cut(s) 637, 1083, 1490
Bme18I GGWCC 2 cut(s) 656, 1801
BmgT120I GGNCC 3 cut(s) 656, 1079, 1801
BmiI GGNNCC 5 cut(s) 330, 1062, 1080, 1159, 1802
BmrFI CCNGG 3 cut(s) 637, 1083, 1490
BmrI ACTGGG 1 cut(s) 1776
BmsI GCATC 8 cut(s) 472, 554, 814, 888, 1282, 1462, 1825, 1921
BmuI ACTGGG 1 cut(s) 1776
BoxI GACNNNNGTC 1 cut(s) 654
BpuEI CTTGAG 1 cut(s) 1182
BpuMI CCSGG 1 cut(s) 1490
BsaI GGTCTC 1 cut(s) 613
BsaJI CCNNGG 2 cut(s) 1056, 1186
BsaWI WCCGGW 2 cut(s) 505, 1499
BsaXI ACNNNNNCTCC 2 cut(s) 1160, 1190
Bsc4I CCNNNNNNNGG 2 cut(s) 1719, 1786
Bse1I ACTGG 2 cut(s) 623, 1782
BseAI TCCGGA 1 cut(s) 505
BseBI CCWGG 2 cut(s) 637, 1083
BseDI CCNNGG 2 cut(s) 1056, 1186
BseGI GGATG 6 cut(s) 390, 436, 763, 1220, 1507, 1852
BseLI CCNNNNNNNGG 2 cut(s) 1719, 1786
BseMII CTCAG 4 cut(s) 458, 878, 1548, 1560
BseNI ACTGG 2 cut(s) 623, 1782
BseRI GAGGAG 1 cut(s) 1256
BseXI GCAGC 6 cut(s) 281, 283, 652, 682, 1763, 1875
BshFI GGCC 1 cut(s) 1081
BshNI GGYRCC 2 cut(s) 328, 1060
BsiSI CCGG 3 cut(s) 506, 1489, 1500
BslFI GGGAC 4 cut(s) 88, 325, 1356, 1508
BslI CCNNNNNNNGG 2 cut(s) 1719, 1786
BsmAI GTCTC 6 cut(s) 613, 883, 944, 1651, 1671, 1921
BsmFI GGGAC 4 cut(s) 88, 325, 1356, 1508
BsmI GAATGC 1 cut(s) 434
BsnI GGCC 1 cut(s) 1081
Bso31I GGTCTC 1 cut(s) 613
Bsp1286I GDGCHC 1 cut(s) 1379
Bsp13I TCCGGA 1 cut(s) 505
Bsp1407I TGTACA 1 cut(s) 489
BspACI CCGC 1 cut(s) 561
BspANI GGCC 1 cut(s) 1081
BspCNI CTCAG 4 cut(s) 457, 879, 1549, 1559
BspEI TCCGGA 1 cut(s) 505
BspHI TCATGA 2 cut(s) 808, 1009
BspLI GGNNCC 5 cut(s) 330, 1062, 1080, 1159, 1802
BspPI GGATC 2 cut(s) 497, 1449
BspT107I GGYRCC 2 cut(s) 328, 1060
BspTI CTTAAG 1 cut(s) 277
BspTNI GGTCTC 1 cut(s) 613
BsrGI TGTACA 1 cut(s) 489
BsrI ACTGG 2 cut(s) 623, 1782
BssECI CCNNGG 2 cut(s) 1056, 1186
BssT1I CCWWGG 2 cut(s) 1056, 1186
Bst2UI CCWGG 2 cut(s) 637, 1083
Bst4CI ACNGT 8 cut(s) 87, 305, 701, 1432, 1522, 1538, 1868, 1915
Bst6I CTCTTC 3 cut(s) 339, 851, 1836
BstAFI CTTAAG 1 cut(s) 277
BstAUI TGTACA 1 cut(s) 489
BstDEI CTNAG 8 cut(s) 444, 887, 893, 965, 1364, 1546, 1557, 1622
BstF5I GGATG 6 cut(s) 390, 436, 763, 1220, 1507, 1852
BstMAI GTCTC 6 cut(s) 613, 883, 944, 1651, 1671, 1921
BstMWI GCNNNNNNNGC 2 cut(s) 1078, 1472
BstNI CCWGG 2 cut(s) 637, 1083
BstNSI RCATGY 1 cut(s) 296
BstPAI GACNNNNGTC 1 cut(s) 654
BstSCI CCNGG 3 cut(s) 635, 1081, 1488
BstV1I GCAGC 6 cut(s) 281, 283, 652, 682, 1763, 1875
BstX2I RGATCY 5 cut(s) 144, 199, 447, 502, 1441
BstXI CCANNNNNNTGG 1 cut(s) 308
BstYI RGATCY 5 cut(s) 144, 199, 447, 502, 1441
BsuI GTATCC 1 cut(s) 1147
BsuRI GGCC 1 cut(s) 1081
BtgZI GCGATG 1 cut(s) 1447
BtsCI GGATG 6 cut(s) 390, 436, 763, 1220, 1507, 1852
BtsIMutI CAGTG 6 cut(s) 54, 301, 630, 1002, 1377, 1518
CciI TCATGA 2 cut(s) 808, 1009
Cfr13I GGNCC 3 cut(s) 656, 1079, 1801
Csp6I GTAC 5 cut(s) 88, 490, 1061, 1206, 1857
CviQI GTAC 5 cut(s) 88, 490, 1061, 1206, 1857
DdeI CTNAG 8 cut(s) 444, 887, 893, 965, 1364, 1546, 1557, 1622
DraIII CACNNNGTG 1 cut(s) 968
Eam1104I CTCTTC 3 cut(s) 339, 851, 1836
EarI CTCTTC 3 cut(s) 339, 851, 1836
Eco130I CCWWGG 2 cut(s) 1056, 1186
Eco24I GRGCYC 1 cut(s) 1379
Eco31I GGTCTC 1 cut(s) 613
Eco32I GATATC 1 cut(s) 1000
Eco47I GGWCC 2 cut(s) 656, 1801
EcoRII CCWGG 2 cut(s) 635, 1081
EcoRV GATATC 1 cut(s) 1000
EcoT14I CCWWGG 2 cut(s) 1056, 1186
EcoT22I ATGCAT 1 cut(s) 1230
EcoT38I GRGCYC 1 cut(s) 1379
ErhI CCWWGG 2 cut(s) 1056, 1186
FaqI GGGAC 4 cut(s) 88, 325, 1356, 1508
FbaI TGATCA 1 cut(s) 1006
Fnu4HI GCNGC 6 cut(s) 270, 297, 641, 671, 1777, 1889
FokI GGATG 6 cut(s) 397, 423, 750, 1227, 1494, 1859
FriOI GRGCYC 1 cut(s) 1379
Fsp4HI GCNGC 6 cut(s) 270, 297, 641, 671, 1777, 1889
FspBI CTAG 2 cut(s) 1152, 1187
GluI GCNGC 6 cut(s) 270, 297, 641, 671, 1777, 1889
HaeIII GGCC 1 cut(s) 1081
HapII CCGG 3 cut(s) 506, 1489, 1500
HincII GTYRAC 2 cut(s) 112, 367
HindII GTYRAC 2 cut(s) 112, 367
HpaI GTTAAC 1 cut(s) 112
HpaII CCGG 3 cut(s) 506, 1489, 1500
HphI GGTGA 5 cut(s) 266, 415, 617, 839, 1089
Hpy166II GTNNAC 5 cut(s) 66, 112, 367, 838, 1505
Hpy188III TCNNGA 8 cut(s) 506, 809, 1010, 1199, 1256, 1358, 1380, 1832
Hpy8I GTNNAC 5 cut(s) 66, 112, 367, 838, 1505
HpyAV CCTTC 6 cut(s) 596, 905, 1171, 1536, 1567, 1766
HpyCH4III ACNGT 8 cut(s) 87, 305, 701, 1432, 1522, 1538, 1868, 1915
HpyCH4IV ACGT 1 cut(s) 1102
HpyF10VI GCNNNNNNNGC 2 cut(s) 1078, 1472
HpyF3I CTNAG 8 cut(s) 444, 887, 893, 965, 1364, 1546, 1557, 1622
HpySE526I ACGT 1 cut(s) 1102
Kpn2I TCCGGA 1 cut(s) 505
KpnI GGTACC 1 cut(s) 1064
Ksp22I TGATCA 1 cut(s) 1006
KspAI GTTAAC 1 cut(s) 112
LmnI GCTCC 3 cut(s) 1190, 1618, 1686
Lsp1109I GCAGC 6 cut(s) 281, 283, 652, 682, 1763, 1875
LweI GCATC 8 cut(s) 472, 554, 814, 888, 1282, 1462, 1825, 1921
MaeI CTAG 2 cut(s) 1152, 1187
MaeII ACGT 1 cut(s) 1102
MaeIII GTNAC 8 cut(s) 52, 176, 209, 403, 1015, 1124, 1279, 1426
MfeI CAATTG 2 cut(s) 564, 1129
MflI RGATCY 5 cut(s) 144, 199, 447, 502, 1441
MhlI GDGCHC 1 cut(s) 1379
MlyI GAGTC 3 cut(s) 70, 1274, 1363
MmeI TCCRAC 2 cut(s) 975, 1164
Mph1103I ATGCAT 1 cut(s) 1230
MroI TCCGGA 1 cut(s) 505
MseI TTAA 6 cut(s) 81, 111, 225, 278, 1446, 1749
MslI CAYNNNNRTG 8 cut(s) 59, 174, 810, 813, 1131, 1215, 1395, 1433
MspA1I CMGCKG 1 cut(s) 1888
MspCI CTTAAG 1 cut(s) 277
MspI CCGG 3 cut(s) 506, 1489, 1500
MspR9I CCNGG 3 cut(s) 637, 1083, 1490
MunI CAATTG 2 cut(s) 564, 1129
Mva1269I GAATGC 1 cut(s) 434
MvaI CCWGG 2 cut(s) 637, 1083
MwoI GCNNNNNNNGC 2 cut(s) 1078, 1472
NciI CCSGG 1 cut(s) 1490
NlaIV GGNNCC 5 cut(s) 330, 1062, 1080, 1159, 1802
NmuCI GTSAC 7 cut(s) 52, 176, 209, 403, 1124, 1279, 1426
NsiI ATGCAT 1 cut(s) 1230
NspI RCATGY 1 cut(s) 296
OliI CACNNNNGTG 1 cut(s) 1131
PagI TCATGA 2 cut(s) 808, 1009
PctI GAATGC 1 cut(s) 434
PfeI GAWTC 7 cut(s) 190, 740, 779, 1094, 1301, 1417, 1940
PfoI TCCNGGA 1 cut(s) 1488
PkrI GCNGC 6 cut(s) 271, 298, 642, 672, 1778, 1890
PleI GAGTC 3 cut(s) 70, 1273, 1362
PpsI GAGTC 3 cut(s) 70, 1273, 1362
PshAI GACNNNNGTC 1 cut(s) 654
Psp6I CCWGG 2 cut(s) 635, 1081
PspGI CCWGG 2 cut(s) 635, 1081
PspN4I GGNNCC 5 cut(s) 330, 1062, 1080, 1159, 1802
PspPI GGNCC 3 cut(s) 656, 1079, 1801
PsuI RGATCY 5 cut(s) 144, 199, 447, 502, 1441
PvuII CAGCTG 1 cut(s) 1888
RsaI GTAC 5 cut(s) 89, 491, 1062, 1207, 1858
RsaNI GTAC 5 cut(s) 88, 490, 1061, 1206, 1857
RseI CAYNNNNRTG 8 cut(s) 59, 174, 810, 813, 1131, 1215, 1395, 1433
SaqAI TTAA 6 cut(s) 81, 111, 225, 278, 1446, 1749
SatI GCNGC 6 cut(s) 270, 297, 641, 671, 1777, 1889
Sau96I GGNCC 3 cut(s) 656, 1079, 1801
SchI GAGTC 3 cut(s) 70, 1274, 1363
ScrFI CCNGG 3 cut(s) 637, 1083, 1490
SduI GDGCHC 1 cut(s) 1379
SfaNI GCATC 8 cut(s) 472, 554, 814, 888, 1282, 1462, 1825, 1921
SinI GGWCC 2 cut(s) 656, 1801
SmiMI CAYNNNNRTG 8 cut(s) 59, 174, 810, 813, 1131, 1215, 1395, 1433
SmlI CTYRAG 2 cut(s) 277, 1197
SmoI CTYRAG 2 cut(s) 277, 1197
SsiI CCGC 1 cut(s) 561
SspMI CTAG 2 cut(s) 1152, 1187
StyD4I CCNGG 3 cut(s) 635, 1081, 1488
StyI CCWWGG 2 cut(s) 1056, 1186
TaaI ACNGT 8 cut(s) 87, 305, 701, 1432, 1522, 1538, 1868, 1915
TaiI ACGT 1 cut(s) 1105
TaqI TCGA 3 cut(s) 722, 738, 1529
TatI WGTACW 2 cut(s) 87, 489
TfiI GAWTC 7 cut(s) 190, 740, 779, 1094, 1301, 1417, 1940
Tru1I TTAA 6 cut(s) 81, 111, 225, 278, 1446, 1749
Tru9I TTAA 6 cut(s) 81, 111, 225, 278, 1446, 1749
TscAI CASTG 6 cut(s) 61, 308, 630, 1009, 1377, 1525
TseFI GTSAC 7 cut(s) 52, 176, 209, 403, 1124, 1279, 1426
TseI GCWGC 6 cut(s) 269, 296, 640, 670, 1776, 1888
Tsp45I GTSAC 7 cut(s) 52, 176, 209, 403, 1124, 1279, 1426
TspGWI ACGGA 1 cut(s) 1298
TspRI CASTG 6 cut(s) 61, 308, 630, 1009, 1377, 1525
Vha464I CTTAAG 1 cut(s) 277
VpaK11BI GGWCC 2 cut(s) 656, 1801
XapI RAATTY 4 cut(s) 1118, 1480, 1566, 1738
XceI RCATGY 1 cut(s) 296
XcmI CCANNNNNNNNNTGG 1 cut(s) 1151
XmaJI CCTAGG 1 cut(s) 1186
XspI CTAG 2 cut(s) 1152, 1187
Zsp2I ATGCAT 1 cut(s) 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.