Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003243

Physical Location & Seq

Genomic Coordinates Reverse (-)

56062968 .. 56067361

Gene Structure 4394 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40058

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGAGAGTAGCTTCTCTTCTCCCCGGAACGATTCGTTTCCGGCCGGCCTCCGGGTTCTCGTCGTCGACGATGACCCAACTTGGCTTAAGATCTTGGAAAAGATGCTCAAGAAGTGCTCCTATGAAGTGACTACATGTGGTTTGGCAAGAGATGCTTTATACTTGCTTCGAGAAAAGAAAGATGGATATGACATTGTAATCAGTGATGTGAACATGCCTGACATGGATGGTTTTAAACTTCTCGAGCATGTTGGACTTGAGATGGATCTTCCTGTTATTATGATGTCTGTTGATGGCGAAACAAGTAGGGTTATGAAAGGAGTTCAACATGGAGCATGTGATTATCTTCTTAAGCCTATAAGAATGAAAGAACTGAGAAACATATGGCAGCATGTCTTCAGAAAAAAGATACATGAGATAAGAGACATAGAGGGTCATGAAAGCATCGATGGTATTCAGCTGACGAGAAATGGATCAGATCTCTATGATGATGGATACTTCCTTGGTGCCGACGACCTCATTTCATCAAGAAAAAGAAAGGACATCGAAAACAAATATGATGACAAAGACTTTGGTGATTCTTCATCTACGAAAAAAGCTAGGGTAGTCTGGTCTGTTGATCTTCATCAGAAATTTGTAAAAGCGGTGCATCAGATTGGATTTGACAAAGTTGGTCCAAAGAAAATACTTGACCTGATGAACGTGCCCTGGTTGACCAGGGAAAATGTTGCAAGCCACTTGCAGAAGTATCGGCTCTATTTGAGTAGGCTGCAAAAGGAAAATGACCTTAAATCTTCTTTTGGCGGGATGAAGCATTCTGATTATGCCACAAAAGATCCTCAAGGAATCTTTGGTGTTCAGAACTCGATTAGCATTCCACAAAATGATGTTACAAATGGCAGCTACAGATTTTCTGGCAATAGCTTGGTTGCTCCGACTGTGGTGGATCCAAAGAGACTTGAAGATGATGTAAAGGGAATTATTCCGGAGCCTGTAGCAGAACCCAAGACCAGAAGTTCACAAGTGGACTTAAGTCATTCTTATGCAGAAACCAAGAAAGGCTTGATTGGTAATGTTGCTGATTCTCTGAAGATCAGGAGTTCACAGATGGGAGTCAATCATTCATTTGCATCAGTGGAATCTGAAATAAACTTCACTATACCAACAAAGTATTCTTGGATTGAAGCTCAAATGAAACAAGAGCACAAGCCGGTTGTTCAGTTAGATAATGGCTTCAACAAGCCACAACCGCCTGGTGTACAGCACCACCTCCAAGCTGATCTACTACAGCCAATTCCTTCCATTAGTCCAAGACCATCCATCTTAGATGAAGAAACAAATCGTCCCATTAAGAATAAGCCTTCACAAGCTGCGTACAGAAACAGTCACATTAGCCATGTAAGTCCAACAATAACTGCAGCAGACTCCTTTTCAGAACAGACCAAGAGCTGTGTGGTGGACCAAGGTTTTGACCCCAGTTCCGGCAGTTTATCAAACATGAAAAACCAGGGCTTCAATCTGAGTTACCTTACTAATTTCGAACCTGGCCAAAAGAACCTATTCTTTGGAAGTGGTTCATCTTTTGCTTCTTTGGACGACGAGTTGCAAATTTGTTTGTGTCCAGCTGATTATTTTGGTATGAACCTTGAGGTTTCGGAGTATAATGATGCTGAAGTTCCTGCTCACTTGTATGAGGCAATGAGATTTGGCTGTGAGTATCCATGTGAGTCATCGGAATATTCTCTGGCAGATCAGAGTCTTTTCATAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048507 GO:0048509 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

590

Amino Acids

66.25

Weight (kDa)

5.63

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	19 - 128	1.9e-24	Response regulator receiver domain
Myb_DNA-binding	PF00249	201 - 251	8.6e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67710 AT1G67710 AT1G67710
fragaria_vesca	FvH4_4g24870 FvH4_4g24870 FvH4_4g24870 FvH4_4g24870 FvH4_4g24870 FvH4_4g24870
malus_domestica	MD00G1165700.v1.1 MD13G1108300.v1.1 MD16G1108400.v1.1
prunus_persica	Prupe.1G238200_v2.0.a1 Prupe.1G238200_v2.0.a1 Prupe.1G238200_v2.0.a1 Prupe.1G238200_v2.0.a1 Prupe.1G238200_v2.0.a1
pyrus_communis	pycom13g09350 pycom13g09360 pycom13g09390 pycom16g09230 pycom16g09240 pycom16g09250 pycom16g13680
rosa_chinensis	RchiOBHm_Chr4g0431941
rosa_laevigata	RLG00000006873
rosa_multiflora	Rmu_sc0004965.1_g000010
rosa_roxburghii	Rroxscaffold_5G00373380
rosa_rugosa	Rorug04G0253300 Rorug04G0253300 Rorug04G0253300 Rorug04G0253400
rosa_samantha	Rh4AG310600 Rh4BG317700 Rh4CG333000 Rh4DG312600
rosa_wichuraiana	Rw4G027020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	506
AccI	GTMKAC	1 cut(s)	66
AccIII	TCCGGA	1 cut(s)	985
AciI	CCGC	3 cut(s)	644, 804, 1250
AclWI	GGATC	5 cut(s)	273, 481, 830, 941, 954
AcoI	YGGCCR	2 cut(s)	42, 1546
AcsI	RAATTY	2 cut(s)	632, 1608
AcuI	CTGAAG	3 cut(s)	382, 1109, 1692
AfaI	GTAC	2 cut(s)	1260, 1376
AfiI	CCNNNNNNNGG	2 cut(s)	51, 1481
AflII	CTTAAG	3 cut(s)	86, 350, 1030
AflIII	ACRYGT	1 cut(s)	134
AgsI	TTSAA	5 cut(s)	326, 962, 1184, 1237, 1516
AjnI	CCWGG	5 cut(s)	707, 716, 1252, 1506, 1543
AjuI	GAANNNNNNNTTGG	2 cut(s)	1156, 1188
Alw21I	GWGCWC	2 cut(s)	119, 1206
Alw26I	GTCTC	2 cut(s)	417, 949
AlwI	GGATC	5 cut(s)	273, 481, 830, 941, 954
Ama87I	CYCGRG	1 cut(s)	242
Aor13HI	TCCGGA	1 cut(s)	985
AoxI	GGCC	3 cut(s)	42, 46, 1546
ApeKI	GCWGC	5 cut(s)	388, 769, 900, 1370, 1418
ApoI	RAATTY	2 cut(s)	632, 1608
ArsI	GACNNNNNNTTYG	4 cut(s)	554, 586, 1451, 1483
Asp700I	GAANNNNTTC	2 cut(s)	1559, 1573
AspS9I	GGNCC	2 cut(s)	674, 1459
AsuC2I	CCSGG	2 cut(s)	25, 53
AsuHPI	GGTGA	1 cut(s)	587
AsuII	TTCGAA	1 cut(s)	1539
AvaI	CYCGRG	1 cut(s)	242
AvaII	GGWCC	2 cut(s)	674, 1459
BaeGI	GKGCMC	1 cut(s)	708
BalI	TGGCCA	1 cut(s)	1548
BamHI	GGATCC	1 cut(s)	946
BanI	GGYRCC	1 cut(s)	506
BarI	GAAGNNNNNNTAC	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	388
Bbv12I	GWGCWC	2 cut(s)	119, 1206
BbvI	GCAGC	5 cut(s)	400, 756, 912, 1357, 1430
BccI	CCATC	9 cut(s)	176, 221, 256, 287, 443, 485, 1102, 1324, 1328
BcgI	CGANNNNNNTGC	2 cut(s)	731, 765
BciT130I	CCWGG	5 cut(s)	709, 718, 1254, 1508, 1545
BciVI	GTATCC	2 cut(s)	488, 1728
BcnI	CCSGG	2 cut(s)	25, 53
BcoDI	GTCTC	2 cut(s)	417, 949
BfaI	CTAG	1 cut(s)	600
BfmI	CTRYAG	4 cut(s)	904, 993, 1286, 1416
BfrI	CTTAAG	3 cut(s)	86, 350, 1030
BfuI	GTATCC	2 cut(s)	488, 1728
BglII	AGATCT	2 cut(s)	90, 478
BisI	GCNGC	5 cut(s)	389, 770, 901, 1371, 1419
BlsI	GCNGC	5 cut(s)	390, 771, 902, 1372, 1420
Bme1390I	CCNGG	7 cut(s)	25, 53, 709, 718, 1254, 1508, 1545
Bme18I	GGWCC	2 cut(s)	674, 1459
BmeT110I	CYCGRG	1 cut(s)	242
BmgT120I	GGNCC	2 cut(s)	674, 1459
BmiI	GGNNCC	3 cut(s)	508, 948, 990
BmrFI	CCNGG	7 cut(s)	25, 53, 709, 718, 1254, 1508, 1545
BmrI	ACTGGG	1 cut(s)	1470
BmsI	GCATC	6 cut(s)	93, 142, 453, 658, 1139, 1657
BmuI	ACTGGG	1 cut(s)	1470
BoxI	GACNNNNGTC	1 cut(s)	1032
BpiI	GAAGAC	1 cut(s)	388
Bpu14I	TTCGAA	1 cut(s)	1539
BpuEI	CTTGAG	4 cut(s)	92, 278, 825, 1667
BpuMI	CCSGG	2 cut(s)	25, 53
Bsa29I	ATCGAT	1 cut(s)	447
BsaBI	GATNNNNATC	1 cut(s)	624
BsaJI	CCNNGG	6 cut(s)	23, 502, 707, 717, 1462, 1507
BsaWI	WCCGGW	1 cut(s)	985
Bsc4I	CCNNNNNNNGG	2 cut(s)	51, 1481
Bse118I	RCCGGY	2 cut(s)	44, 1210
Bse1I	ACTGG	1 cut(s)	1476
Bse3DI	GCAATG	1 cut(s)	1704
Bse8I	GATNNNNATC	1 cut(s)	624
BseAI	TCCGGA	1 cut(s)	985
BseBI	CCWGG	5 cut(s)	709, 718, 1254, 1508, 1545
BseCI	ATCGAT	1 cut(s)	447
BseDI	CCNNGG	6 cut(s)	23, 502, 707, 717, 1462, 1507
BseGI	GGATG	3 cut(s)	232, 813, 1316
BseJI	GATNNNNATC	1 cut(s)	624
BseLI	CCNNNNNNNGG	2 cut(s)	51, 1481
BseMI	GCAATG	1 cut(s)	1704
BseMII	CTCAG	2 cut(s)	365, 1511
BseNI	ACTGG	1 cut(s)	1476
BseSI	GKGCMC	1 cut(s)	708
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	5 cut(s)	400, 756, 912, 1357, 1430
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	3 cut(s)	44, 48, 1548
BshNI	GGYRCC	1 cut(s)	506
BshVI	ATCGAT	1 cut(s)	447
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	2 cut(s)	119, 1206
BsiHKCI	CYCGRG	1 cut(s)	242
BsiSI	CCGG	7 cut(s)	25, 41, 45, 52, 986, 1211, 1482
BslFI	GGGAC	1 cut(s)	1329
BslI	CCNNNNNNNGG	2 cut(s)	51, 1481
BsmAI	GTCTC	2 cut(s)	417, 949
BsmFI	GGGAC	1 cut(s)	1329
BsmI	GAATGC	2 cut(s)	814, 873
BsnI	GGCC	3 cut(s)	44, 48, 1548
BsoBI	CYCGRG	1 cut(s)	242
Bsp119I	TTCGAA	1 cut(s)	1539
Bsp1286I	GDGCHC	3 cut(s)	119, 708, 1206
Bsp13I	TCCGGA	1 cut(s)	985
Bsp1407I	TGTACA	1 cut(s)	1258
BspACI	CCGC	3 cut(s)	644, 804, 1250
BspANI	GGCC	3 cut(s)	44, 48, 1548
BspCNI	CTCAG	2 cut(s)	366, 1512
BspDI	ATCGAT	1 cut(s)	447
BspEI	TCCGGA	1 cut(s)	985
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	3 cut(s)	508, 948, 990
BspMAI	CTGCAG	1 cut(s)	1420
BspPI	GGATC	5 cut(s)	273, 481, 830, 941, 954
BspT104I	TTCGAA	1 cut(s)	1539
BspT107I	GGYRCC	1 cut(s)	506
BspTI	CTTAAG	3 cut(s)	86, 350, 1030
BsrDI	GCAATG	1 cut(s)	1704
BsrFI	RCCGGY	2 cut(s)	44, 1210
BsrGI	TGTACA	1 cut(s)	1258
BsrI	ACTGG	1 cut(s)	1476
BssAI	RCCGGY	2 cut(s)	44, 1210
BssECI	CCNNGG	6 cut(s)	23, 502, 707, 717, 1462, 1507
BssT1I	CCWWGG	2 cut(s)	502, 1462
Bst2UI	CCWGG	5 cut(s)	709, 718, 1254, 1508, 1545
Bst4CI	ACNGT	2 cut(s)	940, 1385
Bst6I	CTCTTC	1 cut(s)	22
BstAFI	CTTAAG	3 cut(s)	86, 350, 1030
BstAPI	GCANNNNNTGC	1 cut(s)	152
BstAUI	TGTACA	1 cut(s)	1258
BstBI	TTCGAA	1 cut(s)	1539
BstC8I	GCNNGC	2 cut(s)	46, 733
BstDEI	CTNAG	3 cut(s)	374, 1324, 1520
BstF5I	GGATG	3 cut(s)	232, 813, 1316
BstMAI	GTCTC	2 cut(s)	417, 949
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	2 cut(s)	152, 1249
BstNI	CCWGG	5 cut(s)	709, 718, 1254, 1508, 1545
BstNSI	RCATGY	5 cut(s)	138, 217, 251, 339, 395
BstPAI	GACNNNNGTC	1 cut(s)	1032
BstSCI	CCNGG	7 cut(s)	23, 51, 707, 716, 1252, 1506, 1543
BstSFI	CTRYAG	4 cut(s)	904, 993, 1286, 1416
BstSLI	GKGCMC	1 cut(s)	708
BstV1I	GCAGC	5 cut(s)	400, 756, 912, 1357, 1430
BstV2I	GAAGAC	1 cut(s)	388
BstX2I	RGATCY	5 cut(s)	90, 265, 478, 835, 946
BstYI	RGATCY	5 cut(s)	90, 265, 478, 835, 946
BstZI	CGGCCG	1 cut(s)	42
Bsu15I	ATCGAT	1 cut(s)	447
BsuI	GTATCC	2 cut(s)	488, 1728
BsuRI	GGCC	3 cut(s)	44, 48, 1548
BsuTUI	ATCGAT	1 cut(s)	447
BtsCI	GGATG	3 cut(s)	232, 813, 1316
BtsIMutI	CAGTG	2 cut(s)	208, 1140
Cac8I	GCNNGC	2 cut(s)	46, 733
CciI	TCATGA	1 cut(s)	436
Cfr10I	RCCGGY	2 cut(s)	44, 1210
Cfr13I	GGNCC	2 cut(s)	674, 1459
ClaI	ATCGAT	1 cut(s)	447
Csp6I	GTAC	2 cut(s)	1259, 1375
CviQI	GTAC	2 cut(s)	1259, 1375
DdeI	CTNAG	3 cut(s)	374, 1324, 1520
DraI	TTTAAA	1 cut(s)	235
EaeI	YGGCCR	2 cut(s)	42, 1546
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	22
EarI	CTCTTC	1 cut(s)	22
EclXI	CGGCCG	1 cut(s)	42
Eco130I	CCWWGG	2 cut(s)	502, 1462
Eco47I	GGWCC	2 cut(s)	674, 1459
Eco52I	CGGCCG	1 cut(s)	42
Eco57I	CTGAAG	3 cut(s)	382, 1109, 1692
Eco88I	CYCGRG	1 cut(s)	242
EcoRII	CCWGG	5 cut(s)	707, 716, 1252, 1506, 1543
EcoT14I	CCWWGG	2 cut(s)	502, 1462
ErhI	CCWWGG	2 cut(s)	502, 1462
FalI	AAGNNNNNCTT	6 cut(s)	139, 171, 1024, 1056, 1046, 1078
FaqI	GGGAC	1 cut(s)	1329
FauI	CCCGC	1 cut(s)	797
FauNDI	CATATG	1 cut(s)	383
FblI	GTMKAC	1 cut(s)	66
Fnu4HI	GCNGC	5 cut(s)	389, 770, 901, 1371, 1419
FokI	GGATG	3 cut(s)	239, 820, 1303
FseI	GGCCGGCC	1 cut(s)	48
Fsp4HI	GCNGC	5 cut(s)	389, 770, 901, 1371, 1419
FspBI	CTAG	1 cut(s)	600
GluI	GCNGC	5 cut(s)	389, 770, 901, 1371, 1419
HaeIII	GGCC	3 cut(s)	44, 48, 1548
HapII	CCGG	7 cut(s)	25, 41, 45, 52, 986, 1211, 1482
HincII	GTYRAC	2 cut(s)	67, 714
HindII	GTYRAC	2 cut(s)	67, 714
HinfI	GANTC	9 cut(s)	32, 578, 846, 1082, 1113, 1139, 1424, 1727, 1756
HpaII	CCGG	7 cut(s)	25, 41, 45, 52, 986, 1211, 1482
HphI	GGTGA	1 cut(s)	587
Hpy166II	GTNNAC	8 cut(s)	67, 211, 714, 1019, 1027, 1103, 1259, 1459
Hpy188III	TCNNGA	7 cut(s)	109, 170, 242, 437, 528, 986, 1096
Hpy8I	GTNNAC	8 cut(s)	67, 211, 714, 1019, 1027, 1103, 1259, 1459
Hpy99I	CGWCG	5 cut(s)	65, 68, 71, 515, 1601
HpyAV	CCTTC	2 cut(s)	1308, 1371
HpyCH4III	ACNGT	2 cut(s)	940, 1385
HpyCH4IV	ACGT	1 cut(s)	702
HpyCH4V	TGCA	8 cut(s)	649, 731, 742, 772, 1046, 1130, 1418, 1606
HpyF10VI	GCNNNNNNNGC	2 cut(s)	152, 1249
HpyF3I	CTNAG	3 cut(s)	374, 1324, 1520
HpySE526I	ACGT	1 cut(s)	702
Kpn2I	TCCGGA	1 cut(s)	985
KroI	GCCGGC	1 cut(s)	44
KroNI	GCCGGC	1 cut(s)	46
LmnI	GCTCC	4 cut(s)	122, 332, 937, 988
Lsp1109I	GCAGC	5 cut(s)	400, 756, 912, 1357, 1430
LweI	GCATC	6 cut(s)	93, 142, 453, 658, 1139, 1657
MaeI	CTAG	1 cut(s)	600
MaeII	ACGT	1 cut(s)	702
MaeIII	GTNAC	4 cut(s)	127, 889, 1385, 1523
MflI	RGATCY	5 cut(s)	90, 265, 478, 835, 946
MhlI	GDGCHC	3 cut(s)	119, 708, 1206
MlsI	TGGCCA	1 cut(s)	1548
MluCI	AATT	5 cut(s)	632, 978, 1293, 1534, 1608
MluNI	TGGCCA	1 cut(s)	1548
MlyI	GAGTC	4 cut(s)	1122, 1418, 1736, 1765
MmeI	TCCRAC	3 cut(s)	232, 959, 1430
MnlI	CCTC	7 cut(s)	59, 424, 527, 849, 1280, 1642, 1687
Mox20I	TGGCCA	1 cut(s)	1548
MroI	TCCGGA	1 cut(s)	985
MroNI	GCCGGC	1 cut(s)	44
MroXI	GAANNNNTTC	2 cut(s)	1559, 1573
MscI	TGGCCA	1 cut(s)	1548
MseI	TTAA	6 cut(s)	87, 234, 351, 789, 1031, 1350
MslI	CAYNNNNRTG	2 cut(s)	1041, 1689
Msp20I	TGGCCA	1 cut(s)	1548
MspA1I	CMGCKG	2 cut(s)	460, 1625
MspCI	CTTAAG	3 cut(s)	86, 350, 1030
MspI	CCGG	7 cut(s)	25, 41, 45, 52, 986, 1211, 1482
MspR9I	CCNGG	7 cut(s)	25, 53, 709, 718, 1254, 1508, 1545
Mva1269I	GAATGC	2 cut(s)	814, 873
MvaI	CCWGG	5 cut(s)	709, 718, 1254, 1508, 1545
MwoI	GCNNNNNNNGC	2 cut(s)	152, 1249
NaeI	GCCGGC	1 cut(s)	46
NciI	CCSGG	2 cut(s)	25, 53
NdeI	CATATG	1 cut(s)	383
NgoMIV	GCCGGC	1 cut(s)	44
NlaIV	GGNNCC	3 cut(s)	508, 948, 990
NmuCI	GTSAC	2 cut(s)	127, 1385
NspI	RCATGY	5 cut(s)	138, 217, 251, 339, 395
NspV	TTCGAA	1 cut(s)	1539
PaeR7I	CTCGAG	1 cut(s)	242
PagI	TCATGA	1 cut(s)	436
PciI	ACATGT	1 cut(s)	134
PcsI	WCGNNNNNNNCGW	1 cut(s)	66
PctI	GAATGC	2 cut(s)	814, 873
PdiI	GCCGGC	1 cut(s)	46
PdmI	GAANNNNTTC	2 cut(s)	1559, 1573
PfeI	GAWTC	5 cut(s)	32, 578, 846, 1082, 1139
PkrI	GCNGC	5 cut(s)	390, 771, 902, 1372, 1420
PleI	GAGTC	4 cut(s)	1121, 1418, 1735, 1764
PpsI	GAGTC	4 cut(s)	1121, 1418, 1735, 1764
PscI	ACATGT	1 cut(s)	134
PshAI	GACNNNNGTC	1 cut(s)	1032
Psp6I	CCWGG	5 cut(s)	707, 716, 1252, 1506, 1543
PspGI	CCWGG	5 cut(s)	707, 716, 1252, 1506, 1543
PspN4I	GGNNCC	3 cut(s)	508, 948, 990
PspPI	GGNCC	2 cut(s)	674, 1459
PstI	CTGCAG	1 cut(s)	1420
PsuI	RGATCY	5 cut(s)	90, 265, 478, 835, 946
PvuII	CAGCTG	2 cut(s)	460, 1625
RigI	GGCCGGCC	1 cut(s)	48
RsaI	GTAC	2 cut(s)	1260, 1376
RsaNI	GTAC	2 cut(s)	1259, 1375
RseI	CAYNNNNRTG	2 cut(s)	1041, 1689
SalI	GTCGAC	1 cut(s)	65
SaqAI	TTAA	6 cut(s)	87, 234, 351, 789, 1031, 1350
SatI	GCNGC	5 cut(s)	389, 770, 901, 1371, 1419
Sau96I	GGNCC	2 cut(s)	674, 1459
SchI	GAGTC	4 cut(s)	1122, 1418, 1736, 1765
ScrFI	CCNGG	7 cut(s)	25, 53, 709, 718, 1254, 1508, 1545
SduI	GDGCHC	3 cut(s)	119, 708, 1206
SfaNI	GCATC	6 cut(s)	93, 142, 453, 658, 1139, 1657
SfcI	CTRYAG	4 cut(s)	904, 993, 1286, 1416
Sfr274I	CTCGAG	1 cut(s)	242
SfuI	TTCGAA	1 cut(s)	1539
SgrDI	CGTCGACG	1 cut(s)	65
SinI	GGWCC	2 cut(s)	674, 1459
SlaI	CTCGAG	1 cut(s)	242
SmiMI	CAYNNNNRTG	2 cut(s)	1041, 1689
SmlI	CTYRAG	8 cut(s)	86, 107, 242, 257, 350, 840, 1030, 1646
SmoI	CTYRAG	8 cut(s)	86, 107, 242, 257, 350, 840, 1030, 1646
Sse9I	AATT	5 cut(s)	632, 978, 1293, 1534, 1608
SsiI	CCGC	3 cut(s)	644, 804, 1250
SspI	AATATT	1 cut(s)	1739
SspMI	CTAG	1 cut(s)	600
StyD4I	CCNGG	7 cut(s)	23, 51, 707, 716, 1252, 1506, 1543
StyI	CCWWGG	2 cut(s)	502, 1462
TaaI	ACNGT	2 cut(s)	940, 1385
TaiI	ACGT	1 cut(s)	705
TaqI	TCGA	7 cut(s)	66, 169, 243, 447, 546, 866, 1539
TasI	AATT	5 cut(s)	632, 978, 1293, 1534, 1608
TatI	WGTACW	1 cut(s)	1258
TfiI	GAWTC	5 cut(s)	32, 578, 846, 1082, 1139
Tru1I	TTAA	6 cut(s)	87, 234, 351, 789, 1031, 1350
Tru9I	TTAA	6 cut(s)	87, 234, 351, 789, 1031, 1350
TscAI	CASTG	2 cut(s)	208, 1140
TseFI	GTSAC	2 cut(s)	127, 1385
TseI	GCWGC	5 cut(s)	388, 769, 900, 1370, 1418
Tsp45I	GTSAC	2 cut(s)	127, 1385
TspRI	CASTG	2 cut(s)	208, 1140
Vha464I	CTTAAG	3 cut(s)	86, 350, 1030
VpaK11BI	GGWCC	2 cut(s)	674, 1459
XapI	RAATTY	2 cut(s)	632, 1608
XceI	RCATGY	5 cut(s)	138, 217, 251, 339, 395
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1450
XhoI	CTCGAG	1 cut(s)	242
XmiI	GTMKAC	1 cut(s)	66
XmnI	GAANNNNTTC	2 cut(s)	1559, 1573
XspI	CTAG	1 cut(s)	600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.