RchiOBHm_Chr5g0040811

Splicing factor, suppressor of white-apricot homolog

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
35428985 .. 35434399
5415 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31928

Sequence Viewer

Length: 2796 bp
ATGGACTTGGAGGTGGTTGGCCGTCACGCGCTGCTTTTCGACGACGACAACAGCGCGTCGTTCGTCAACTCACCCGACGCGCTCGTCGAGTGGAACTCCCTCTTCATCGACCGCTACGACGTCCGTCACCTCCTCCCACTTCCTTTGCCTCCTCGCACGCGCCGCCGTCAGCCCCACCCCGATGCCTCGCTGGAGTCCGAGCTTGATCTCGAGCGCTACCACGATTTGCCGTCGCCGTCGGAGGAAGCAGAAGAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGATGCAGGTAATGATGCAGATGTGCCAAACAGTGGTGGCTATCACTCTGTTGCATTTGCATATGGAAACCCAGATGAAACAACCGAGCAGAAGAGTAATGATGCTGAGCCTGTTTTTCGTCCAGCCTTTCCGGTGCCAGAAAGTTTGATTCAAAACCTTGCATGCAGTTCTTGTTACCAAGGGTCTGTGCAGCCTCCAACAGAAAAGATACATCAGATCATTGCAAGAACAGCTGCGTTTGTCGCCAAGCATGGTGGACAGTCGGAAATTGTTTTGAGGGTGAAACAGGGAGACAATCCAATGTTTGGGTTCTTGATGCCTGACCATCACCTTCATGCATACTTTAGGTTTCTTGTCGATCACCAAGAACTACTGAAGCAGGATACTCACGGAGTTTCTGCACAGGAAGAGAAGAAAAACAGTGGTGGTCTTGATCAGACAGGTGGAGCATTGTCTTTGCTTGGTTCTGTATATGGGTCTGGAGAGGATGAGGATGACATGGCTGAGGATGCATCTGACTTGCAAAAACTGAACTCTCAAGAAGCTGTTGATGCAATTATTGCAACTGTGCATGGGTCAGAGCAGAAAGAATCTACTGGAAATGTAACCGGGAAAAATGATACTGTTTCCAAGTTTCCATGTCCTCCTTTGAAGGAAAAAGTTAATCTCATTAAACATAATCGTATCACTAGCACAGTTAAAGGTGGAGCCACAAGTGGGATGAAGAAAGAAAGTGATGCCTCGGGATCACTTTCTACTGCTGCCAATAAGTCACAGGCTCCTGCTATGCCTAGTGCATCGAAGGTTGAACTACCCATTTTGGAGCCACCATCTGATCAAAGGAGAGTTGTGGAGAAAATTGTTGAGTTCATATTAAAGAACGGCAGAGAGTTTGAAGCTATTCTGGCTGAACAGAACTGTAAACAGGGAAGATTTTTGTTCCTTCTGCCATCTAATCAATATCATCCTTACTACTTGAAAGTTCTCCAAGATGCTCAAGAGTCCAAATTACACGGCAAGCACTTAGTTTCTGAGAAGCAAGAATCGGCTGGGCGTGAGGTGGACAAGAAATCCACCAAGGGAAGTGATGCCCTCTCCTCTGGATCTGCTGGTCATGAAATACCGTTTGATTATGACAGGAAAGAAAAATTTAAGATGGTAATCGGCAAGTCAAAGAAGGATGGACATGATCTGCCTTCCAAATCAAACCAGCCAGAAGTTGGAGTCAGTGTGGATGCAGTCGCAGCTATTCTTCAGGCTGCCACAAGAGGCATTAAGAATCCGGGTTTAGACATATTCCCAAAACCGTCTTCTAGTGGTGCTGGTCAAGGTTCTAGCAATGATGGTGGTCGAGATTTGAGCTCTGGAAGTCAAAAGGCATATTGTTCTAGTGGTGTTGGTCAAGGTTCTAACATTCCTGTTCCTGTTGCCAAGGCCATTGCAGAGACGGCTGCTCTTGCAGCTGCAAGTGAGGCCGACTCCTCTGAAGCATCTTTGACTAAAGAGCAGAAGCTAAAGGCTGAAAGATTGAAACGAGCGAAGATGTTTGCTGCCATGATAAAAGGTGGATCTGCACCATTGAAAACTGAGTCATTACGTGGCGTATCTGCTGAGCCACCAGAATCTGGAGTTTCATCATCAGGTAATGAGGTTTTAAATCTTACAACCAGAGAAAGAGAAGGGAGTTCAGCTCCATTGGAAGTTGATGTTTCAAATAAGGTGGAAGAATTTGACAAGAAATTTTCTGTTGATGAGTGTAATGAGCGACGATCAAAGAAGGCCTATCGTACTCTATCTAAAAGGGTTGAAGAAGAAGAAGATGGTGAAGATGACAGTGACGAAGAAAAAGAGAGCAAGGAAGAAGATAAAAAGGTTCAGAAGCACTCTAAGAAGCGTCGGTCTCATCATTCTTCAGACAATGGTAAGGACAGGCACAGACACAAAAGGCATTCCTCTTCCAAGGATAGAGACTCTAGGCGCCATCGTAAGCATGAGAGTTCTGATGAGAAGCGTCAGCACTCTCGGAGTAAGCATAAGAAGAATAGCTCTGATGATGAACATCAGCCTTCAAAAAGGCATCGGCATCATAGCTCATCTGATGATGATCATTGGCGTTCTGAACGCCAGCATATTCATAGTGAGCATCGGACTTCTCGAAGTAGGCATAAGCGTAGTGACTCTTCTGATGATGAGCACCGGCATTCTCGGCGTCGGCACAATCGTGGTAGTTCGTCTGAGGATGAGCACCGGCATCGAAGGACAACTGTAAAGCATAGGGAACCTGAATCTGAAAAAGACATGGAATTAGAGGAAGGAGAGATCATTTTAAAGTCGGAGCAATCAATAGCTAGTGGGGGCGGTATTGCTAGTAGAGAAGCTTCTGTGGATATTTCAAAATCAGATGAGGTTGGAAGAGCTCCATCTCAGCCTTCGGGTGGCACTGTGGTTTCAGATGATCTTAGGGCCAAAATTCGAGCCATGTTGATGGCAACGTTGTAA

Protein Analysis

931

Amino Acids

102.9

Weight (kDa)

6.08

Isoelectric Point (pI)

63.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DRY_EERY PF09750 2 - 122 9.8e-25 Alternative splicing regulator
Surp PF01805 171 - 219 1.1e-14 Surp module
Surp PF01805 380 - 429 4.1e-10 Surp module
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
AatII GACGTC 1 cut(s) 123
Acc36I ACCTGC 1 cut(s) 293
AccB1I GGYRCC 2 cut(s) 430, 2274
AccB7I CCANNNNNTGG 4 cut(s) 329, 602, 1517, 1922
AccII CGCG 4 cut(s) 29, 56, 80, 160
AciI CCGC 3 cut(s) 112, 163, 2655
AclI AACGTT 1 cut(s) 2789
AclWI GGATC 3 cut(s) 1051, 1408, 1873
AcoI YGGCCR 1 cut(s) 19
AcsI RAATTY 4 cut(s) 1445, 2024, 2036, 2766
AcuI CTGAAG 4 cut(s) 692, 1535, 1803, 2193
AcyI GRCGYC 3 cut(s) 120, 2275, 2506
AfaI GTAC 1 cut(s) 2086
AfeI AGCGCT 1 cut(s) 215
AfiI CCNNNNNNNGG 6 cut(s) 329, 602, 1014, 1517, 1922, 2732
AjuI GAANNNNNNNTTGG 2 cut(s) 1591, 1623
AleI CACNNNNGTG 1 cut(s) 2517
Alw21I GWGCWC 4 cut(s) 1661, 2493, 2544, 2716
Alw26I GTCTC 4 cut(s) 582, 1736, 2202, 2259
AlwI GGATC 3 cut(s) 1051, 1408, 1873
AlwNI CAGNNNCTG 1 cut(s) 1922
Ama87I CYCGRG 2 cut(s) 209, 1039
Aor51HI AGCGCT 1 cut(s) 215
AoxI GGCC 5 cut(s) 19, 1731, 1770, 2076, 2760
ApoI RAATTY 4 cut(s) 1445, 2024, 2036, 2766
Asp700I GAANNNNTTC 1 cut(s) 1197
AspLEI GCGC 6 cut(s) 31, 56, 82, 162, 216, 2277
AspS9I GGNCC 1 cut(s) 2760
AsuC2I CCSGG 2 cut(s) 907, 1581
AsuHPI GGTGA 6 cut(s) 63, 119, 589, 617, 650, 2132
AvaI CYCGRG 2 cut(s) 209, 1039
BanI GGYRCC 2 cut(s) 430, 2274
BanII GRGCYC 2 cut(s) 1661, 2716
BarI GAAGNNNNNNTAC 4 cut(s) 2461, 2493, 2659, 2691
BbsI GAAGAC 1 cut(s) 1599
Bbv12I GWGCWC 4 cut(s) 1661, 2493, 2544, 2716
BbvCI CCTCAGC 1 cut(s) 801
BceAI ACGGC 7 cut(s) 6, 150, 214, 220, 1195, 1327, 1761
BcgI CGANNNNNNTGC 2 cut(s) 2531, 2565
BciVI GTATCC 1 cut(s) 673
BclI TGATCA 3 cut(s) 730, 1132, 2401
BcnI CCSGG 2 cut(s) 907, 1581
BcoDI GTCTC 4 cut(s) 582, 1736, 2202, 2259
BfaI CTAG 8 cut(s) 987, 1089, 1611, 1632, 1686, 2271, 2646, 2664
BfoI RGCGCY 2 cut(s) 217, 2278
BfuAI ACCTGC 1 cut(s) 293
BfuI GTATCC 1 cut(s) 673
BlpI GCTNAGC 2 cut(s) 402, 1908
Bme1390I CCNGG 2 cut(s) 907, 1581
BmeT110I CYCGRG 2 cut(s) 209, 1039
BmgT120I GGNCC 1 cut(s) 2760
BmiI GGNNCC 6 cut(s) 432, 1006, 1077, 1122, 2276, 2577
BmrFI CCNGG 2 cut(s) 907, 1581
BoxI GACNNNNGTC 1 cut(s) 123
BpiI GAAGAC 1 cut(s) 1599
BplI GAGNNNNNCTC 6 cut(s) 80, 112, 1760, 1792, 1972, 2004
BpmI CTGGAG 3 cut(s) 212, 798, 1944
Bpu10I CCTNAGC 1 cut(s) 801
Bpu1102I GCTNAGC 2 cut(s) 402, 1908
BpuEI CTTGAG 2 cut(s) 819, 1278
BpuMI CCSGG 2 cut(s) 907, 1581
BsaAI YACGTR 1 cut(s) 1895
BsaBI GATNNNNATC 3 cut(s) 1457, 2355, 2400
BsaHI GRCGYC 3 cut(s) 120, 2275, 2506
BsaI GGTCTC 1 cut(s) 2202
BsaJI CCNNGG 5 cut(s) 475, 1038, 1374, 1728, 2256
BsaWI WCCGGW 1 cut(s) 427
BsaXI ACNNNNNCTCC 2 cut(s) 1512, 1542
Bsc4I CCNNNNNNNGG 6 cut(s) 329, 602, 1014, 1517, 1922, 2732
Bse118I RCCGGY 2 cut(s) 2493, 2544
Bse1I ACTGG 1 cut(s) 898
Bse3DI GCAATG 3 cut(s) 516, 1642, 1734
Bse8I GATNNNNATC 3 cut(s) 1457, 2355, 2400
BseDI CCNNGG 5 cut(s) 475, 1038, 1374, 1728, 2256
BseGI GGATG 8 cut(s) 790, 796, 811, 1023, 1261, 1483, 1537, 2542
BseJI GATNNNNATC 3 cut(s) 1457, 2355, 2400
BseLI CCNNNNNNNGG 6 cut(s) 329, 602, 1014, 1517, 1922, 2732
BseMI GCAATG 3 cut(s) 516, 1642, 1734
BseMII CTCAG 7 cut(s) 393, 792, 1320, 1875, 1899, 2523, 2735
BseNI ACTGG 1 cut(s) 898
BseRI GAGGAG 4 cut(s) 122, 141, 1384, 1768
BseYI CCCAGC 1 cut(s) 1346
BsgI GTGCAG 3 cut(s) 506, 681, 1854
Bsh1236I CGCG 4 cut(s) 29, 56, 80, 160
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 5 cut(s) 21, 1733, 1772, 2078, 2762
BshNI GGYRCC 2 cut(s) 430, 2274
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 4 cut(s) 1661, 2493, 2544, 2716
BsiHKCI CYCGRG 2 cut(s) 209, 1039
BsiSI CCGG 5 cut(s) 428, 906, 1580, 2494, 2545
BslI CCNNNNNNNGG 6 cut(s) 329, 602, 1014, 1517, 1922, 2732
BsmAI GTCTC 4 cut(s) 582, 1736, 2202, 2259
BsmBI CGTCTC 1 cut(s) 1736
BsmI GAATGC 2 cut(s) 2245, 2497
BsnI GGCC 5 cut(s) 21, 1733, 1772, 2078, 2762
Bso31I GGTCTC 1 cut(s) 2202
BsoBI CYCGRG 2 cut(s) 209, 1039
Bsp1286I GDGCHC 4 cut(s) 1661, 2493, 2544, 2716
Bsp1720I GCTNAGC 2 cut(s) 402, 1908
BspACI CCGC 3 cut(s) 112, 163, 2655
BspANI GGCC 5 cut(s) 21, 1733, 1772, 2078, 2762
BspCNI CTCAG 7 cut(s) 394, 793, 1321, 1876, 1900, 2524, 2734
BspFNI CGCG 4 cut(s) 29, 56, 80, 160
BspHI TCATGA 1 cut(s) 1411
BspLI GGNNCC 6 cut(s) 432, 1006, 1077, 1122, 2276, 2577
BspMI ACCTGC 1 cut(s) 293
BspPI GGATC 3 cut(s) 1051, 1408, 1873
BspQI GCTCTTC 1 cut(s) 2704
BspT107I GGYRCC 2 cut(s) 430, 2274
BspTNI GGTCTC 1 cut(s) 2202
BsrDI GCAATG 3 cut(s) 516, 1642, 1734
BsrFI RCCGGY 2 cut(s) 2493, 2544
BsrI ACTGG 1 cut(s) 898
BssAI RCCGGY 2 cut(s) 2493, 2544
BssECI CCNNGG 5 cut(s) 475, 1038, 1374, 1728, 2256
BssNI GRCGYC 3 cut(s) 120, 2275, 2506
BssT1I CCWWGG 4 cut(s) 475, 1374, 1728, 2256
Bst6I CTCTTC 6 cut(s) 107, 383, 699, 2257, 2482, 2704
BstACI GRCGYC 3 cut(s) 120, 2275, 2506
BstAPI GCANNNNNTGC 1 cut(s) 857
BstBAI YACGTR 1 cut(s) 1895
BstC8I GCNNGC 4 cut(s) 158, 460, 1316, 2423
BstF5I GGATG 8 cut(s) 790, 796, 811, 1023, 1261, 1483, 1537, 2542
BstFNI CGCG 4 cut(s) 29, 56, 80, 160
BstH2I RGCGCY 2 cut(s) 217, 2278
BstHHI GCGC 6 cut(s) 31, 56, 82, 162, 216, 2277
BstMAI GTCTC 4 cut(s) 582, 1736, 2202, 2259
BstMCI CGRYCG 1 cut(s) 112
BstNSI RCATGY 1 cut(s) 462
BstPAI GACNNNNGTC 1 cut(s) 123
BstSCI CCNGG 2 cut(s) 905, 1579
BstUI CGCG 4 cut(s) 29, 56, 80, 160
BstV2I GAAGAC 1 cut(s) 1599
BstX2I RGATCY 2 cut(s) 1400, 1865
BstXI CCANNNNNNTGG 1 cut(s) 2782
BstYI RGATCY 2 cut(s) 1400, 1865
BsuI GTATCC 1 cut(s) 673
BsuRI GGCC 5 cut(s) 21, 1733, 1772, 2078, 2762
BtsCI GGATG 8 cut(s) 790, 796, 811, 1023, 1261, 1483, 1537, 2542
BtsIMutI CAGTG 5 cut(s) 334, 724, 1531, 2137, 2736
BveI ACCTGC 1 cut(s) 293
Cac8I GCNNGC 4 cut(s) 158, 460, 1316, 2423
CaiI CAGNNNCTG 1 cut(s) 1922
CciI TCATGA 1 cut(s) 1411
CfoI GCGC 6 cut(s) 31, 56, 82, 162, 216, 2277
Cfr10I RCCGGY 2 cut(s) 2493, 2544
Cfr13I GGNCC 1 cut(s) 2760
CseI GACGC 5 cut(s) 45, 86, 2180, 2297, 2495
Csp6I GTAC 1 cut(s) 2085
CspCI CAANNNNNGTGG 8 cut(s) 126, 161, 532, 567, 1624, 1659, 1998, 2033
CviQI GTAC 1 cut(s) 2085
DinI GGCGCC 1 cut(s) 2276
DraI TTTAAA 2 cut(s) 1953, 2625
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 1 cut(s) 19
Eam1104I CTCTTC 6 cut(s) 107, 383, 699, 2257, 2482, 2704
EarI CTCTTC 6 cut(s) 107, 383, 699, 2257, 2482, 2704
Ecl136II GAGCTC 2 cut(s) 1659, 2714
Eco130I CCWWGG 4 cut(s) 475, 1374, 1728, 2256
Eco147I AGGCCT 1 cut(s) 2078
Eco24I GRGCYC 2 cut(s) 1661, 2716
Eco31I GGTCTC 1 cut(s) 2202
Eco47III AGCGCT 1 cut(s) 215
Eco53kI GAGCTC 2 cut(s) 1659, 2714
Eco57I CTGAAG 4 cut(s) 692, 1535, 1803, 2193
Eco88I CYCGRG 2 cut(s) 209, 1039
EcoICRI GAGCTC 2 cut(s) 1659, 2714
EcoT14I CCWWGG 4 cut(s) 475, 1374, 1728, 2256
EcoT22I ATGCAT 2 cut(s) 637, 811
EcoT38I GRGCYC 2 cut(s) 1661, 2716
EgeI GGCGCC 1 cut(s) 2276
EheI GGCGCC 1 cut(s) 2276
ErhI CCWWGG 4 cut(s) 475, 1374, 1728, 2256
Esp3I CGTCTC 1 cut(s) 1736
FauNDI CATATG 1 cut(s) 358
FbaI TGATCA 3 cut(s) 730, 1132, 2401
FokI GGATG 8 cut(s) 797, 803, 818, 1030, 1248, 1490, 1544, 2549
FriOI GRGCYC 2 cut(s) 1661, 2716
FspBI CTAG 8 cut(s) 987, 1089, 1611, 1632, 1686, 2271, 2646, 2664
GlaI GCGC 6 cut(s) 30, 55, 81, 161, 215, 2276
GsaI CCCAGC 1 cut(s) 1350
GsuI CTGGAG 3 cut(s) 212, 798, 1944
HaeII RGCGCY 2 cut(s) 217, 2278
HaeIII GGCC 5 cut(s) 21, 1733, 1772, 2078, 2762
HapII CCGG 5 cut(s) 428, 906, 1580, 2494, 2545
HgaI GACGC 5 cut(s) 45, 86, 2180, 2297, 2495
HhaI GCGC 6 cut(s) 31, 56, 82, 162, 216, 2277
Hin1I GRCGYC 3 cut(s) 120, 2275, 2506
Hin6I GCGC 6 cut(s) 29, 54, 80, 160, 214, 2275
HinP1I GCGC 6 cut(s) 29, 54, 80, 160, 214, 2275
HincII GTYRAC 1 cut(s) 67
HindII GTYRAC 1 cut(s) 67
HindIII AAGCTT 1 cut(s) 2673
HpaII CCGG 5 cut(s) 428, 906, 1580, 2494, 2545
HphI GGTGA 6 cut(s) 63, 119, 589, 617, 650, 2132
Hpy166II GTNNAC 4 cut(s) 67, 554, 1220, 1360
Hpy8I GTNNAC 4 cut(s) 67, 554, 1220, 1360
HpyCH4IV ACGT 3 cut(s) 120, 1894, 2789
HpySE526I ACGT 3 cut(s) 120, 1894, 2789
Hsp92I GRCGYC 3 cut(s) 120, 2275, 2506
HspAI GCGC 6 cut(s) 29, 54, 80, 160, 214, 2275
KasI GGCGCC 1 cut(s) 2274
Ksp22I TGATCA 3 cut(s) 730, 1132, 2401
LguI GCTCTTC 1 cut(s) 2704
LmnI GCTCC 7 cut(s) 743, 1004, 1081, 1120, 1993, 2632, 2719
MaeI CTAG 8 cut(s) 987, 1089, 1611, 1632, 1686, 2271, 2646, 2664
MaeII ACGT 3 cut(s) 120, 1894, 2789
MaeIII GTNAC 7 cut(s) 23, 125, 470, 901, 1068, 2132, 2471
MflI RGATCY 2 cut(s) 1400, 1865
MhlI GDGCHC 4 cut(s) 1661, 2493, 2544, 2716
MluCI AATT 9 cut(s) 564, 852, 1155, 1304, 1445, 2024, 2036, 2600, 2766
Mly113I GGCGCC 1 cut(s) 2275
MlyI GAGTC 7 cut(s) 203, 1307, 1530, 1769, 1895, 2261, 2468
MmeI TCCRAC 6 cut(s) 219, 518, 540, 1498, 2610, 2686
Mph1103I ATGCAT 2 cut(s) 637, 811
MroXI GAANNNNTTC 1 cut(s) 1197
MseI TTAA 8 cut(s) 960, 969, 996, 1172, 1449, 1572, 1952, 2624
MslI CAYNNNNRTG 4 cut(s) 180, 630, 2517, 2780
MspA1I CMGCKG 2 cut(s) 530, 1760
MspI CCGG 5 cut(s) 428, 906, 1580, 2494, 2545
MspR9I CCNGG 2 cut(s) 907, 1581
Mva1269I GAATGC 2 cut(s) 2245, 2497
MvnI CGCG 4 cut(s) 29, 56, 80, 160
NarI GGCGCC 1 cut(s) 2275
NciI CCSGG 2 cut(s) 907, 1581
NdeI CATATG 1 cut(s) 358
NlaIV GGNNCC 6 cut(s) 432, 1006, 1077, 1122, 2276, 2577
NmeAIII GCCGAG 1 cut(s) 2482
NmuCI GTSAC 5 cut(s) 23, 125, 1068, 2132, 2471
NsiI ATGCAT 2 cut(s) 637, 811
NspI RCATGY 1 cut(s) 462
OliI CACNNNNGTG 1 cut(s) 2517
PaeI GCATGC 1 cut(s) 462
PaeR7I CTCGAG 1 cut(s) 209
PagI TCATGA 1 cut(s) 1411
PceI AGGCCT 1 cut(s) 2078
PciSI GCTCTTC 1 cut(s) 2704
PcsI WCGNNNNNNNCGW 4 cut(s) 84, 114, 2449, 2515
PctI GAATGC 2 cut(s) 2245, 2497
PdmI GAANNNNTTC 1 cut(s) 1197
PfeI GAWTC 6 cut(s) 445, 887, 1340, 1576, 1919, 2582
PflMI CCANNNNNTGG 4 cut(s) 329, 602, 1517, 1922
PleI GAGTC 7 cut(s) 202, 1306, 1529, 1769, 1894, 2261, 2468
PluTI GGCGCC 1 cut(s) 2278
PpsI GAGTC 7 cut(s) 202, 1306, 1529, 1769, 1894, 2261, 2468
Ppu21I YACGTR 1 cut(s) 1895
PshAI GACNNNNGTC 1 cut(s) 123
Psp124BI GAGCTC 2 cut(s) 1661, 2716
Psp1406I AACGTT 1 cut(s) 2789
PspFI CCCAGC 1 cut(s) 1346
PspN4I GGNNCC 6 cut(s) 432, 1006, 1077, 1122, 2276, 2577
PspPI GGNCC 1 cut(s) 2760
PstNI CAGNNNCTG 1 cut(s) 1922
PsuI RGATCY 2 cut(s) 1400, 1865
PvuII CAGCTG 2 cut(s) 530, 1760
RsaI GTAC 1 cut(s) 2086
RsaNI GTAC 1 cut(s) 2085
RseI CAYNNNNRTG 4 cut(s) 180, 630, 2517, 2780
SacI GAGCTC 2 cut(s) 1661, 2716
SapI GCTCTTC 1 cut(s) 2704
SaqAI TTAA 8 cut(s) 960, 969, 996, 1172, 1449, 1572, 1952, 2624
Sau96I GGNCC 1 cut(s) 2760
SchI GAGTC 7 cut(s) 203, 1307, 1530, 1769, 1895, 2261, 2468
ScrFI CCNGG 2 cut(s) 907, 1581
SduI GDGCHC 4 cut(s) 1661, 2493, 2544, 2716
SfoI GGCGCC 1 cut(s) 2276
Sfr274I CTCGAG 1 cut(s) 209
SlaI CTCGAG 1 cut(s) 209
SmiMI CAYNNNNRTG 4 cut(s) 180, 630, 2517, 2780
SmlI CTYRAG 3 cut(s) 209, 834, 1293
SmoI CTYRAG 3 cut(s) 209, 834, 1293
SphI GCATGC 1 cut(s) 462
Sse9I AATT 9 cut(s) 564, 852, 1155, 1304, 1445, 2024, 2036, 2600, 2766
SseBI AGGCCT 1 cut(s) 2078
SsiI CCGC 3 cut(s) 112, 163, 2655
SspDI GGCGCC 1 cut(s) 2274
SspMI CTAG 8 cut(s) 987, 1089, 1611, 1632, 1686, 2271, 2646, 2664
SstI GAGCTC 2 cut(s) 1661, 2716
StuI AGGCCT 1 cut(s) 2078
StyD4I CCNGG 2 cut(s) 905, 1579
StyI CCWWGG 4 cut(s) 475, 1374, 1728, 2256
TaiI ACGT 3 cut(s) 123, 1897, 2792
TaqII GACCGA 1 cut(s) 2184
TasI AATT 9 cut(s) 564, 852, 1155, 1304, 1445, 2024, 2036, 2600, 2766
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 6 cut(s) 445, 887, 1340, 1576, 1919, 2582
Tru1I TTAA 8 cut(s) 960, 969, 996, 1172, 1449, 1572, 1952, 2624
Tru9I TTAA 8 cut(s) 960, 969, 996, 1172, 1449, 1572, 1952, 2624
TscAI CASTG 5 cut(s) 334, 724, 1531, 2137, 2743
TseFI GTSAC 5 cut(s) 23, 125, 1068, 2132, 2471
Tsp45I GTSAC 5 cut(s) 23, 125, 1068, 2132, 2471
TspDTI ATGAA 9 cut(s) 94, 387, 620, 1034, 1156, 1428, 1920, 2367, 2420
TspGWI ACGGA 2 cut(s) 113, 702
TspRI CASTG 5 cut(s) 334, 724, 1531, 2137, 2743
Van91I CCANNNNNTGG 4 cut(s) 329, 602, 1517, 1922
XapI RAATTY 4 cut(s) 1445, 2024, 2036, 2766
XceI RCATGY 1 cut(s) 462
XcmI CCANNNNNNNNNTGG 1 cut(s) 1514
XhoI CTCGAG 1 cut(s) 209
XmnI GAANNNNTTC 1 cut(s) 1197
XspI CTAG 8 cut(s) 987, 1089, 1611, 1632, 1686, 2271, 2646, 2664
ZraI GACGTC 1 cut(s) 121
Zsp2I ATGCAT 2 cut(s) 637, 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.