Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000748

Physical Location & Seq

Genomic Coordinates Reverse (-)

36574000 .. 36579367

Gene Structure 5368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG273200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGTTTGGGTTCTTGATGCCTGACCATCACCTTCATGCATACTTTAGGTTTCTTGTCGATCACCAAGAACTACTGAAGCAGGATACACACAGAGTTTCTGCACAGGAAGAGAAGAAAAACAGTGGTGGTCTTGATCAGACAGGTGGAGCATTGTCTTTGCTTGGTTCTGTATATGGGTCTGGAGAGGATGAGGATGAAATGGCTGAGGATGCATCAGACTTGCAAAAACTGAACTCTCAAGAAGCTGTTGATGCAATTATTGCAACTGTGCATGGGTCAGAGCAGAAAGAATCTACTGGAAATGTAACCGGGAAAAATGATACTGTTTCCAAGTTTCCATGTCCTCCTTTGAAGGAAAAAGTTAATCTCATTAAACATAATCGTATCACTAGCACAGTTAAAGGTGGAGCCACAAGTGGGATGAAGAAAGAAAGTGATGCCTCGGGATCACTTTCTACTGCTGCCAATAAGTCACAGGCTCCTGCTATGCCTAGTGCATCGAAGGTTGAACTACCCATTTTGGAGCCACCATCTGATCAAAGGAGAGTTGTGGAGAAAATTGTTGAGTTCATATTAAAGAACGGCAGAGAGTTTGAAGCTATTCTGGCTGAACAGAACTGTAAACAGGGAAGATTTTTGTTCCTTCTGCCATCTAATCAATATCATCCTTACTACTTGAAAGTTCTCCAAGATGCTCAAGAGTCCAAATTACACGGCAAGCACTTAGTTTCTGAGAAGCAAGAATCGGCTGGGCGTGAGGTGGACAAGAAATCCACCAAGGGAAGTGATGCCCTCTCCTCTGGATCTGCTGGTCATGAAATACCGTTTGATTATGACAGGAAAGAAAAATTTAAGATGGTAATCGGCAAGTCAAAGAAGGATGGACATGATCTGCCTTCCAAATCAAACCAGCCAGAAGTTGGAGTCAGTGTGGATGCAGTCGCAGCTATTCTTCAGGCTGCCACAAGAGGCATTAAGAATCCGGGTTTAGACATATTCCCAAAACCGTCTTCTAGTGGTGCTGGTCAAGGTTCTAGCAATGATGGTGGTCGAGATTTGAGCTCAGGAAGTCAAAGGGCATATTGTTCTAGTGGTGTTGGTCAAGGTTCTAACATTCCTGTTCCTGTTGCCAAGGCCATTGCAGAGACGGCTGCTCTTGCAGCTGCAAGTGAGGCCGACTCCTCTGAAGCATCTTTGACTAAAGAGCAGAAGCTAAAGGCTGAAAGATTGAAACGAGCGAAGATGTTTGCTGCCATGATAAAAGGTGGATCTGCACCACTGAAAACCGAGTCATTACGTGGCGTATCTGCTGAGCCACCAGAATCTGGAGTTTCATCATCAGGTAATGAGGTTTTAAATCTTGCAACCAGAGAAAGAGAAGGGAGTTCAGCTCCACTGGAAGTTGATGTTTCAAATAAGGTGGAAGAATTTGACAAGAAATTTTCTGTTGATGAGTGTAATGAGCGACGATCAAAGAAGGCCTATCGTACTCTATCTAAAAGGGTTGAAGAAGAAGAAGATGGTGAAGGTGAAGGTGAAGGTGAAGGTGACGAAGAAAAAGAGAGTAAGGAAGAAGATAAAAAGGTTCAGAAGCACTCTAAGAAGCGTCGGTCTCATCATTCTTCGGACAATGGTAAGGACAGGCACAGACACAAAAGGCATTCCTCTTCCAAGGATAGAGATTCTAGGCGCCATCGTAAGCATGAGAGTTCTGATGAGAAGCATCAGCACTCTCGGAGTAAGCATAAGAAGAATAGCTCTGATGATGAACATCAGCCTTCAAAAAGGCATCGGCATCATAGCTCATCTGATGATGATCATTGGCGTTCTGAACGCCAGCATATTCATAGTGAGCATCGAACTTCTCGAAGTAGGCATAAGCGCAGTGACTCTTCTGATGATGAGAACCGGCATTCTCGGCGTCGGCACAATCGTGGTAGTTCATCTGAGGATGAGCACCGGCATCGAAGGACAACTGTAAAGCATAGGGAACCTGAATCTGAAAAAGACATGGAATTAGAGGAAGGAGAGATCATTTTAAAGTCGGATCAATCAATAGCTAGTGGGGGCGGTATTGCTAGTAGAGAAGCTTCTGTGGATATTTCAAAATCAGATGAGGTTGGAAGAGCTCCATCTCAGCCTTCGGGTGGCACTGTGGTTTCAGATGATCTTAGGGCCAAAATTCGAGCCATGTTGATGGCAACGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000380 GO:0000395 GO:0000398 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0031324 GO:0033119 GO:0034622 GO:0034641 GO:0043170 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0045292 GO:0045934 GO:0046483 GO:0048024 GO:0048025 GO:0048519 GO:0048523 GO:0050684 GO:0050686 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065003 GO:0065007 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:1901360 GO:1903311 GO:1903312

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DRY_EERY Surp

Protein Analysis

736

Amino Acids

80.98

Weight (kDa)

7.51

Isoelectric Point (pI)

57.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	181 - 230	3.1e-10	Surp module

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000748)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100 AT5G55100
fragaria_vesca	FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160 FvH4_3g23160
malus_domestica	MD11G1213100.v1.1 MD11G1213200.v1.1
prunus_persica	Prupe.4G218000_v2.0.a1 Prupe.4G218000_v2.0.a1 Prupe.4G218000_v2.0.a1 Prupe.4G218000_v2.0.a1 Prupe.4G218000_v2.0.a1
pyrus_communis	pycom11g18800
rosa_chinensis	RchiOBHm_Chr5g0040811
rosa_laevigata	RLG00000034004
rosa_multiflora	Rmu_co8000140.1_g000001 Rmu_sc0001579.1_g000004 Rmu_sc0013576.1_g000005
rosa_roxburghii	Rroxscaffold_175G00432480 Rroxscaffold_1G00039890 Rroxscaffold_7G00202520 Rroxscaffold_7G00210240
rosa_rugosa	Rorug03G0107700 Rorug05G0187600 Rorug05G0187600 Rorug05G0187600 Rorug05G0187600 Rorug05G0187600 Rorug05G0187600 Rorug05G0187700 Rorug05G0187800 Rorug06G0332600 Rorug07G0294400
rosa_samantha	Rh2DG550900 Rh3CG305900 Rh5AG273200 Rh5BG278300 Rh5BG278400 Rh5CG310400 Rh5DG286300
rosa_wichuraiana	Rw5G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1689
AccB7I	CCANNNNNTGG	2 cut(s)	920, 1325
AciI	CCGC	1 cut(s)	2070
AclI	AACGTT	1 cut(s)	2204
AclWI	GGATC	4 cut(s)	454, 811, 1276, 2055
AcsI	RAATTY	4 cut(s)	848, 1427, 1439, 2181
AcuI	CTGAAG	3 cut(s)	95, 938, 1206
AcyI	GRCGYC	2 cut(s)	1690, 1921
AfaI	GTAC	1 cut(s)	1489
AfiI	CCNNNNNNNGG	4 cut(s)	417, 920, 1325, 2147
AgsI	TTSAA	9 cut(s)	352, 509, 596, 679, 1231, 1413, 1508, 1782, 2106
AjuI	GAANNNNNNNTTGG	2 cut(s)	994, 1026
AleI	CACNNNNGTG	1 cut(s)	1932
Alw21I	GWGCWC	3 cut(s)	1064, 1959, 2131
Alw26I	GTCTC	2 cut(s)	1139, 1617
AlwI	GGATC	4 cut(s)	454, 811, 1276, 2055
AlwNI	CAGNNNCTG	1 cut(s)	1325
Ama87I	CYCGRG	1 cut(s)	442
AoxI	GGCC	4 cut(s)	1134, 1173, 1479, 2175
ApeKI	GCWGC	7 cut(s)	461, 944, 959, 1151, 1160, 1163, 1250
ApoI	RAATTY	4 cut(s)	848, 1427, 1439, 2181
Asp700I	GAANNNNTTC	1 cut(s)	600
AspLEI	GCGC	2 cut(s)	1692, 1884
AspS9I	GGNCC	1 cut(s)	2175
AsuC2I	CCSGG	2 cut(s)	310, 984
AsuHPI	GGTGA	7 cut(s)	20, 53, 1535, 1541, 1547, 1553, 1559
AvaI	CYCGRG	1 cut(s)	442
BanI	GGYRCC	1 cut(s)	1689
BanII	GRGCYC	2 cut(s)	1064, 2131
BarI	GAAGNNNNNNTAC	2 cut(s)	2074, 2106
BbsI	GAAGAC	1 cut(s)	1002
Bbv12I	GWGCWC	3 cut(s)	1064, 1959, 2131
BbvCI	CCTCAGC	1 cut(s)	204
BbvI	GCAGC	7 cut(s)	448, 946, 956, 1138, 1150, 1172, 1237
BceAI	ACGGC	3 cut(s)	598, 730, 1164
BcgI	CGANNNNNNTGC	2 cut(s)	1946, 1980
BciVI	GTATCC	1 cut(s)	76
BclI	TGATCA	3 cut(s)	133, 535, 1816
BcnI	CCSGG	2 cut(s)	310, 984
BcoDI	GTCTC	2 cut(s)	1139, 1617
BfaI	CTAG	8 cut(s)	390, 492, 1014, 1035, 1089, 1686, 2061, 2079
BfoI	RGCGCY	1 cut(s)	1693
BfuI	GTATCC	1 cut(s)	76
BisI	GCNGC	7 cut(s)	462, 945, 960, 1152, 1161, 1164, 1251
BlpI	GCTNAGC	1 cut(s)	1311
BlsI	GCNGC	7 cut(s)	463, 946, 961, 1153, 1162, 1165, 1252
Bme1390I	CCNGG	2 cut(s)	310, 984
BmeT110I	CYCGRG	1 cut(s)	442
BmgT120I	GGNCC	1 cut(s)	2175
BmiI	GGNNCC	5 cut(s)	409, 480, 525, 1691, 1992
BmrFI	CCNGG	2 cut(s)	310, 984
BpiI	GAAGAC	1 cut(s)	1002
BplI	GAGNNNNNCTC	4 cut(s)	1163, 1195, 1375, 1407
BpmI	CTGGAG	2 cut(s)	201, 1347
Bpu10I	CCTNAGC	2 cut(s)	204, 1063
Bpu1102I	GCTNAGC	1 cut(s)	1311
BpuEI	CTTGAG	2 cut(s)	222, 681
BpuMI	CCSGG	2 cut(s)	310, 984
BsaAI	YACGTR	1 cut(s)	1298
BsaBI	GATNNNNATC	3 cut(s)	860, 1770, 1815
BsaHI	GRCGYC	2 cut(s)	1690, 1921
BsaI	GGTCTC	1 cut(s)	1617
BsaJI	CCNNGG	4 cut(s)	441, 777, 1131, 1671
BsaXI	ACNNNNNCTCC	2 cut(s)	915, 945
Bsc4I	CCNNNNNNNGG	4 cut(s)	417, 920, 1325, 2147
Bse118I	RCCGGY	2 cut(s)	1908, 1959
Bse1I	ACTGG	2 cut(s)	301, 1401
Bse3DI	GCAATG	2 cut(s)	1045, 1137
Bse8I	GATNNNNATC	3 cut(s)	860, 1770, 1815
BseDI	CCNNGG	4 cut(s)	441, 777, 1131, 1671
BseGI	GGATG	8 cut(s)	193, 199, 214, 426, 664, 886, 940, 1957
BseJI	GATNNNNATC	3 cut(s)	860, 1770, 1815
BseLI	CCNNNNNNNGG	4 cut(s)	417, 920, 1325, 2147
BseMI	GCAATG	2 cut(s)	1045, 1137
BseMII	CTCAG	6 cut(s)	195, 723, 1077, 1302, 1938, 2150
BseNI	ACTGG	2 cut(s)	301, 1401
BseRI	GAGGAG	2 cut(s)	787, 1171
BseXI	GCAGC	7 cut(s)	448, 946, 956, 1138, 1150, 1172, 1237
BseYI	CCCAGC	1 cut(s)	749
BsgI	GTGCAG	2 cut(s)	84, 1257
BshFI	GGCC	4 cut(s)	1136, 1175, 1481, 2177
BshNI	GGYRCC	1 cut(s)	1689
BsiHKAI	GWGCWC	3 cut(s)	1064, 1959, 2131
BsiHKCI	CYCGRG	1 cut(s)	442
BsiSI	CCGG	4 cut(s)	309, 983, 1909, 1960
BslI	CCNNNNNNNGG	4 cut(s)	417, 920, 1325, 2147
BsmAI	GTCTC	2 cut(s)	1139, 1617
BsmBI	CGTCTC	1 cut(s)	1139
BsmI	GAATGC	2 cut(s)	1660, 1912
BsnI	GGCC	4 cut(s)	1136, 1175, 1481, 2177
Bso31I	GGTCTC	1 cut(s)	1617
BsoBI	CYCGRG	1 cut(s)	442
Bsp1286I	GDGCHC	3 cut(s)	1064, 1959, 2131
Bsp1720I	GCTNAGC	1 cut(s)	1311
BspACI	CCGC	1 cut(s)	2070
BspANI	GGCC	4 cut(s)	1136, 1175, 1481, 2177
BspCNI	CTCAG	6 cut(s)	196, 724, 1076, 1303, 1939, 2149
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	5 cut(s)	409, 480, 525, 1691, 1992
BspPI	GGATC	4 cut(s)	454, 811, 1276, 2055
BspQI	GCTCTTC	1 cut(s)	2119
BspT107I	GGYRCC	1 cut(s)	1689
BspTNI	GGTCTC	1 cut(s)	1617
BsrDI	GCAATG	2 cut(s)	1045, 1137
BsrFI	RCCGGY	2 cut(s)	1908, 1959
BsrI	ACTGG	2 cut(s)	301, 1401
BssAI	RCCGGY	2 cut(s)	1908, 1959
BssECI	CCNNGG	4 cut(s)	441, 777, 1131, 1671
BssNI	GRCGYC	2 cut(s)	1690, 1921
BssT1I	CCWWGG	3 cut(s)	777, 1131, 1671
Bst4CI	ACNGT	9 cut(s)	122, 268, 325, 397, 620, 825, 1008, 1978, 2155
Bst6I	CTCTTC	4 cut(s)	102, 1672, 1897, 2119
BstACI	GRCGYC	2 cut(s)	1690, 1921
BstAPI	GCANNNNNTGC	1 cut(s)	260
BstBAI	YACGTR	1 cut(s)	1298
BstC8I	GCNNGC	2 cut(s)	719, 1838
BstDEI	CTNAG	9 cut(s)	204, 724, 732, 1063, 1311, 1599, 1947, 2136, 2171
BstF5I	GGATG	8 cut(s)	193, 199, 214, 426, 664, 886, 940, 1957
BstH2I	RGCGCY	1 cut(s)	1693
BstHHI	GCGC	2 cut(s)	1692, 1884
BstMAI	GTCTC	2 cut(s)	1139, 1617
BstSCI	CCNGG	2 cut(s)	308, 982
BstV1I	GCAGC	7 cut(s)	448, 946, 956, 1138, 1150, 1172, 1237
BstV2I	GAAGAC	1 cut(s)	1002
BstX2I	RGATCY	2 cut(s)	803, 1268
BstXI	CCANNNNNNTGG	1 cut(s)	2197
BstYI	RGATCY	2 cut(s)	803, 1268
BsuI	GTATCC	1 cut(s)	76
BsuRI	GGCC	4 cut(s)	1136, 1175, 1481, 2177
BtsCI	GGATG	8 cut(s)	193, 199, 214, 426, 664, 886, 940, 1957
BtsI	GCAGTG	1 cut(s)	1891
BtsIMutI	CAGTG	6 cut(s)	127, 934, 1277, 1394, 1891, 2151
Cac8I	GCNNGC	2 cut(s)	719, 1838
CaiI	CAGNNNCTG	1 cut(s)	1325
CciI	TCATGA	1 cut(s)	814
CfoI	GCGC	2 cut(s)	1692, 1884
Cfr10I	RCCGGY	2 cut(s)	1908, 1959
Cfr13I	GGNCC	1 cut(s)	2175
CseI	GACGC	2 cut(s)	1595, 1910
Csp6I	GTAC	1 cut(s)	1488
CspCI	CAANNNNNGTGG	4 cut(s)	1027, 1062, 1401, 1436
CviAII	CATG	9 cut(s)	35, 272, 339, 815, 887, 1255, 1703, 2011, 2191
CviQI	GTAC	1 cut(s)	1488
DdeI	CTNAG	9 cut(s)	204, 724, 732, 1063, 1311, 1599, 1947, 2136, 2171
DinI	GGCGCC	1 cut(s)	1691
DraI	TTTAAA	2 cut(s)	1356, 2040
Eam1104I	CTCTTC	4 cut(s)	102, 1672, 1897, 2119
EarI	CTCTTC	4 cut(s)	102, 1672, 1897, 2119
Ecl136II	GAGCTC	2 cut(s)	1062, 2129
Eco130I	CCWWGG	3 cut(s)	777, 1131, 1671
Eco147I	AGGCCT	1 cut(s)	1481
Eco24I	GRGCYC	2 cut(s)	1064, 2131
Eco31I	GGTCTC	1 cut(s)	1617
Eco53kI	GAGCTC	2 cut(s)	1062, 2129
Eco57I	CTGAAG	3 cut(s)	95, 938, 1206
Eco88I	CYCGRG	1 cut(s)	442
EcoICRI	GAGCTC	2 cut(s)	1062, 2129
EcoT14I	CCWWGG	3 cut(s)	777, 1131, 1671
EcoT22I	ATGCAT	2 cut(s)	40, 214
EcoT38I	GRGCYC	2 cut(s)	1064, 2131
EgeI	GGCGCC	1 cut(s)	1691
EheI	GGCGCC	1 cut(s)	1691
ErhI	CCWWGG	3 cut(s)	777, 1131, 1671
Esp3I	CGTCTC	1 cut(s)	1139
FaeI	CATG	9 cut(s)	38, 275, 342, 818, 890, 1258, 1706, 2014, 2194
FatI	CATG	9 cut(s)	34, 271, 338, 814, 886, 1254, 1702, 2010, 2190
FbaI	TGATCA	3 cut(s)	133, 535, 1816
Fnu4HI	GCNGC	7 cut(s)	462, 945, 960, 1152, 1161, 1164, 1251
FokI	GGATG	8 cut(s)	200, 206, 221, 433, 651, 893, 947, 1964
FriOI	GRGCYC	2 cut(s)	1064, 2131
Fsp4HI	GCNGC	7 cut(s)	462, 945, 960, 1152, 1161, 1164, 1251
FspBI	CTAG	8 cut(s)	390, 492, 1014, 1035, 1089, 1686, 2061, 2079
GlaI	GCGC	2 cut(s)	1691, 1883
GluI	GCNGC	7 cut(s)	462, 945, 960, 1152, 1161, 1164, 1251
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	2 cut(s)	201, 1347
HaeII	RGCGCY	1 cut(s)	1693
HaeIII	GGCC	4 cut(s)	1136, 1175, 1481, 2177
HapII	CCGG	4 cut(s)	309, 983, 1909, 1960
HgaI	GACGC	2 cut(s)	1595, 1910
HhaI	GCGC	2 cut(s)	1692, 1884
Hin1I	GRCGYC	2 cut(s)	1690, 1921
Hin1II	CATG	9 cut(s)	38, 275, 342, 818, 890, 1258, 1706, 2014, 2194
Hin6I	GCGC	2 cut(s)	1690, 1882
HinP1I	GCGC	2 cut(s)	1690, 1882
HindIII	AAGCTT	1 cut(s)	2088
HpaII	CCGG	4 cut(s)	309, 983, 1909, 1960
HphI	GGTGA	7 cut(s)	20, 53, 1535, 1541, 1547, 1553, 1559
Hpy166II	GTNNAC	2 cut(s)	623, 763
Hpy8I	GTNNAC	2 cut(s)	623, 763
Hpy99I	CGWCG	3 cut(s)	1470, 1611, 1926
HpyCH4III	ACNGT	9 cut(s)	122, 268, 325, 397, 620, 825, 1008, 1978, 2155
HpyCH4IV	ACGT	2 cut(s)	1297, 2204
HpyF3I	CTNAG	9 cut(s)	204, 724, 732, 1063, 1311, 1599, 1947, 2136, 2171
HpySE526I	ACGT	2 cut(s)	1297, 2204
Hsp92I	GRCGYC	2 cut(s)	1690, 1921
Hsp92II	CATG	9 cut(s)	38, 275, 342, 818, 890, 1258, 1706, 2014, 2194
HspAI	GCGC	2 cut(s)	1690, 1882
KasI	GGCGCC	1 cut(s)	1689
Ksp22I	TGATCA	3 cut(s)	133, 535, 1816
LguI	GCTCTTC	1 cut(s)	2119
LmnI	GCTCC	6 cut(s)	146, 407, 484, 523, 1396, 2134
Lsp1109I	GCAGC	7 cut(s)	448, 946, 956, 1138, 1150, 1172, 1237
MaeI	CTAG	8 cut(s)	390, 492, 1014, 1035, 1089, 1686, 2061, 2079
MaeII	ACGT	2 cut(s)	1297, 2204
MaeIII	GTNAC	4 cut(s)	304, 471, 1547, 1886
MflI	RGATCY	2 cut(s)	803, 1268
MhlI	GDGCHC	3 cut(s)	1064, 1959, 2131
MluCI	AATT	8 cut(s)	255, 558, 707, 848, 1427, 1439, 2015, 2181
Mly113I	GGCGCC	1 cut(s)	1690
MlyI	GAGTC	5 cut(s)	710, 933, 1172, 1298, 1883
MmeI	TCCRAC	3 cut(s)	901, 2025, 2101
Mph1103I	ATGCAT	2 cut(s)	40, 214
MroXI	GAANNNNTTC	1 cut(s)	600
MseI	TTAA	8 cut(s)	363, 372, 399, 575, 852, 975, 1355, 2039
MslI	CAYNNNNRTG	3 cut(s)	33, 1932, 2195
MspA1I	CMGCKG	1 cut(s)	1163
MspI	CCGG	4 cut(s)	309, 983, 1909, 1960
MspR9I	CCNGG	2 cut(s)	310, 984
Mva1269I	GAATGC	2 cut(s)	1660, 1912
NarI	GGCGCC	1 cut(s)	1690
NciI	CCSGG	2 cut(s)	310, 984
NlaIII	CATG	9 cut(s)	38, 275, 342, 818, 890, 1258, 1706, 2014, 2194
NlaIV	GGNNCC	5 cut(s)	409, 480, 525, 1691, 1992
NmeAIII	GCCGAG	1 cut(s)	1897
NmuCI	GTSAC	3 cut(s)	471, 1547, 1886
NsiI	ATGCAT	2 cut(s)	40, 214
OliI	CACNNNNGTG	1 cut(s)	1932
PagI	TCATGA	1 cut(s)	814
PceI	AGGCCT	1 cut(s)	1481
PciSI	GCTCTTC	1 cut(s)	2119
PcsI	WCGNNNNNNNCGW	2 cut(s)	1864, 1930
PctI	GAATGC	2 cut(s)	1660, 1912
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	6 cut(s)	290, 743, 979, 1322, 1682, 1997
PflMI	CCANNNNNTGG	2 cut(s)	920, 1325
PkrI	GCNGC	7 cut(s)	463, 946, 961, 1153, 1162, 1165, 1252
PleI	GAGTC	5 cut(s)	709, 932, 1172, 1297, 1883
PluTI	GGCGCC	1 cut(s)	1693
PpsI	GAGTC	5 cut(s)	709, 932, 1172, 1297, 1883
Ppu21I	YACGTR	1 cut(s)	1298
Psp124BI	GAGCTC	2 cut(s)	1064, 2131
Psp1406I	AACGTT	1 cut(s)	2204
PspFI	CCCAGC	1 cut(s)	749
PspN4I	GGNNCC	5 cut(s)	409, 480, 525, 1691, 1992
PspPI	GGNCC	1 cut(s)	2175
PstNI	CAGNNNCTG	1 cut(s)	1325
PsuI	RGATCY	2 cut(s)	803, 1268
PvuII	CAGCTG	1 cut(s)	1163
RsaI	GTAC	1 cut(s)	1489
RsaNI	GTAC	1 cut(s)	1488
RseI	CAYNNNNRTG	3 cut(s)	33, 1932, 2195
SacI	GAGCTC	2 cut(s)	1064, 2131
SapI	GCTCTTC	1 cut(s)	2119
SaqAI	TTAA	8 cut(s)	363, 372, 399, 575, 852, 975, 1355, 2039
SatI	GCNGC	7 cut(s)	462, 945, 960, 1152, 1161, 1164, 1251
Sau96I	GGNCC	1 cut(s)	2175
SchI	GAGTC	5 cut(s)	710, 933, 1172, 1298, 1883
ScrFI	CCNGG	2 cut(s)	310, 984
SduI	GDGCHC	3 cut(s)	1064, 1959, 2131
SfoI	GGCGCC	1 cut(s)	1691
SmiMI	CAYNNNNRTG	3 cut(s)	33, 1932, 2195
SmlI	CTYRAG	2 cut(s)	237, 696
SmoI	CTYRAG	2 cut(s)	237, 696
Sse9I	AATT	8 cut(s)	255, 558, 707, 848, 1427, 1439, 2015, 2181
SseBI	AGGCCT	1 cut(s)	1481
SsiI	CCGC	1 cut(s)	2070
SspDI	GGCGCC	1 cut(s)	1689
SspMI	CTAG	8 cut(s)	390, 492, 1014, 1035, 1089, 1686, 2061, 2079
SstI	GAGCTC	2 cut(s)	1064, 2131
StuI	AGGCCT	1 cut(s)	1481
StyD4I	CCNGG	2 cut(s)	308, 982
StyI	CCWWGG	3 cut(s)	777, 1131, 1671
TaaI	ACNGT	9 cut(s)	122, 268, 325, 397, 620, 825, 1008, 1978, 2155
TaiI	ACGT	2 cut(s)	1300, 2207
TaqI	TCGA	7 cut(s)	57, 500, 1051, 1858, 1867, 1966, 2185
TaqII	GACCGA	1 cut(s)	1599
TasI	AATT	8 cut(s)	255, 558, 707, 848, 1427, 1439, 2015, 2181
TfiI	GAWTC	6 cut(s)	290, 743, 979, 1322, 1682, 1997
Tru1I	TTAA	8 cut(s)	363, 372, 399, 575, 852, 975, 1355, 2039
Tru9I	TTAA	8 cut(s)	363, 372, 399, 575, 852, 975, 1355, 2039
TscAI	CASTG	6 cut(s)	127, 934, 1284, 1401, 1891, 2158
TseFI	GTSAC	3 cut(s)	471, 1547, 1886
TseI	GCWGC	7 cut(s)	461, 944, 959, 1151, 1160, 1163, 1250
Tsp45I	GTSAC	3 cut(s)	471, 1547, 1886
TspDTI	ATGAA	9 cut(s)	23, 210, 437, 559, 831, 1323, 1782, 1835, 1932
TspRI	CASTG	6 cut(s)	127, 934, 1284, 1401, 1891, 2158
Van91I	CCANNNNNTGG	2 cut(s)	920, 1325
XapI	RAATTY	4 cut(s)	848, 1427, 1439, 2181
XcmI	CCANNNNNNNNNTGG	1 cut(s)	917
XmnI	GAANNNNTTC	1 cut(s)	600
XspI	CTAG	8 cut(s)	390, 492, 1014, 1035, 1089, 1686, 2061, 2079
Zsp2I	ATGCAT	2 cut(s)	40, 214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.