Rroxscaffold_1G00039890

Splicing factor, suppressor of white-apricot homolog

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
57566430 .. 57571405
4976 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00039890.1

Sequence Viewer

Length: 2733 bp
ATGGACTTGGAGGTGGTTGGCCGTCACGCGCTGCTCTTCGACGACGACAACAGCGCGTCGTTCGTCAACTCCCCCAACGCGCTCGTCGAGTGGAACTCCCTCTTCATCGACCGCTACGACGTCCGTCACCTCCTCCCACTTCCTTTGCCTCCTCGCACGCGCCGCCGTCAGCCCCACCCCGATGCCTCGCTGGAGTCCGAGCTTGATCTCGAGCGCTACCACGATTTGCCGTCGCCGTCGGAGGAAGCAAAAGAAGAACAAGGTAATGATGCAGATGTGCCGAACAGTGGTGGCTATCACTCTGTTGCCTTTGCATATGGAAACCCAGATGAAACAACCGAGCAGAAGAGTAATGATGCTGAGCCTGTTTTTCGTCCAGCCTTTCCGGTGCCAGAAAGTTTGATTCAAAATCTTATGATAATTGCTAAGCCTCCAACAGAAAAGATACATCAGATCATTGCAAGAACAGCTGCGTTTGTCGCCAAGCATGGTGGACAGTCGGAAATTGTTTTGAGGGTGAAACAGGGAGACAATCCAATGTTTGGGTTCTTGATGCCTGACCATCACCTTCATGCATACTTTAGGTTTCTTGTCGATCACCAAGAACTACTGAAGCAGGATACTCACGGAGTTTCTGCACAGGAAGAGAAGAAAAACAGTGGTGGTCTTGATCAGACAGGTGGAGCATTGTCTTTGCTTGGTTCTGTATATGGGTCTGGAGAGGATGAGGATGACATGGCTGAGGATGCATCTGACTTGCAAAAACTGAACTCTCAAGAAGCTGTTGATGCAATTATTGCAACTGTGCATGGGTCAGAGCAGAAAGAATATACTGGAAATGTAACCGGGAAAAATGATACTGTTTCCAAGTTTCCATGTCCTCCTTTGAAGGAAAAAGTTAATCTCATTAAACATAATCGTATCACTAGCACAGTTAAAGGTGGAGCCACAAGTGGGATGAAGAAAGAAAGTGATGCCTCGGGATCACTTTCCACTGCTGCCAATAAGTCACAGGCTCCTGCTGTGCCTAGTGCATCGAAGGTTGAACTACCCGTTTTGGAGCCACCATCTGAACAAAGGAGAGTTGTGGAGAAAATTGTTGAGTTCATATTAAAGAACGGCAGAGAGTTTGAAGCTATTCTGGCTGAACAGAACTGTAAACAGGGAAGATTTTTGTTCCTTCTGCCATCTAATCAATATCATCCTTACTACTTGAAAGTTCTCCAAGATGCTCAAGAGTCCAAATTACACGGCAAGCACTTAGTTTCTGAGAAGCAAGAATCGGCTGGGCGTGAGGTGGACAAGAAATCCACCAAGGGAAGTGATGCCCTCTCCTCTGGATCTGCTGGTCATGAAATACCGTTTGATTATGACAGGAAAGAAAAATTTAAGATGGTAATCGGCAAGTCAAAGAAGGATGGACATGATCTGCCTTCCAAATCAAACCAGCCAGAAGTTGGAGTCAGTGTGGATGCAGTCGCAGCTATTCTTCAGGCTGCCACAAGAGGCATTAAGAATCCCGGTTTAGACATATTCCCAAAACTGTCTTCTAGTGGTGCTGGTCAAGGTTCTAGCAATGATGTTGGTCGAGATTTGAGCTCAGGAAGTCAAAGGGCATATTGTTCTAGTGGCGTTGGTCAAGGTTCTAACATTCCTGTTCCTGTTGCCAAGGCCATTGCAGAGACGGCTGCTCTTGCAGCTGCAAGTGAGGCTGACTCCTCTGAAGCATCTTTGACTAAAGAGCAGAAGCTAAAGGCTGAAAGATTGAAACGAGCGAAGATGTTTGCTGCCATGATAAAAGGTGGATCTGCACCATTGAAAACTGAGTCATTACGTGGCGTATCTGCTGAGCCACCAGAATCTGGAGTTTCTTCATCAGGTAATGAGGTTTTAAATCTTGCAACCAGAGAAAGAGAAGGGAGTTCAGCTCCATTGGAAGTTGTTGTTTCAAATAAGGTGGAAGAATTTGACAAGAAATTTTCTGTTGATGAGTGTAATGAGCGACGATCAAAGAAGGCCTATCGTACTCTATCTAAAAGGGTTGAAGGAGAAGATGGTGAAGGTGACAGTGATGAAGAAAAAGAGAGCAAGGAAGAAGATAAAAAGGGTCAGAAGCACTCTAAGAAGCGTCGGTCTCATCATTCTTCAGACAATGGTAAGGGCAGGCACAGACACAAAAGGCATTCCTCTTCCAAGGATAGAGATTCCAGGCGCCATCATAAGCATGAGAGTTCTGATGAGAAGCATCGGTACTCTCGGAGTAAGCATAAGAAGAATAGCTCTGATGATGAACATCAGCCTTCAAAAAGGCATCGGCATCATAGCTCTTCTGATGATGATCATTGGAGTTCTGAACGCCAGCATATTCATAGTGAGCATCGGACTTCTCGAAGTAGGCATAAGCGCAGTGACTCTTCTGATGATGAGCACCGGCATTCTCGGCGTCGGCACAATCGTGGTAGTTCGTCTGAGGATGAGCACTGGCATCGAAGGACAACCGTAAAGCGTAGGGAACCTAAATCTGAAAAAGACATGGAATTAGAGGAAGGAGAGATCATTTTAAAGTCGGATCAATCAATAGCTAGTGCGGGCGGTATTGCTAGTAGAGAAGCTTCTGTGGATATTTCAAAATCAGATGAGGTTGGAAGAGCTCCATCTCAGCCTTCGGGTGGCACTGTGGTTTCAGATGATCTTAGGGCCAAAATTCGAGCCATGTTGATGGCAACGTTGTAA

Protein Analysis

910

Amino Acids

100.33

Weight (kDa)

6.78

Isoelectric Point (pI)

57.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DRY_EERY PF09750 2 - 108 9.7e-20 Alternative splicing regulator
Surp PF01805 151 - 199 1e-14 Surp module
Surp PF01805 360 - 409 4e-10 Surp module
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 123
AccB1I GGYRCC 2 cut(s) 388, 2211
AccB7I CCANNNNNTGG 3 cut(s) 542, 1457, 1862
AccII CGCG 4 cut(s) 29, 56, 80, 160
AciI CCGC 4 cut(s) 112, 163, 2588, 2592
AclI AACGTT 1 cut(s) 2726
AclWI GGATC 4 cut(s) 991, 1348, 1813, 2577
AcoI YGGCCR 1 cut(s) 19
AcsI RAATTY 4 cut(s) 1385, 1964, 1976, 2703
AcuI CTGAAG 4 cut(s) 632, 1475, 1743, 2130
AcyI GRCGYC 3 cut(s) 120, 2212, 2443
AfaI GTAC 2 cut(s) 2026, 2252
AfeI AGCGCT 1 cut(s) 215
AfiI CCNNNNNNNGG 6 cut(s) 287, 542, 954, 1457, 1862, 2669
AjnI CCWGG 1 cut(s) 2207
AjuI GAANNNNNNNTTGG 2 cut(s) 1531, 1563
AleI CACNNNNGTG 1 cut(s) 2454
Alw21I GWGCWC 4 cut(s) 1601, 2430, 2481, 2653
Alw26I GTCTC 3 cut(s) 522, 1676, 2139
AlwI GGATC 4 cut(s) 991, 1348, 1813, 2577
AlwNI CAGNNNCTG 1 cut(s) 1862
Ama87I CYCGRG 2 cut(s) 209, 979
Aor51HI AGCGCT 1 cut(s) 215
AoxI GGCC 4 cut(s) 19, 1671, 2016, 2697
ApeKI GCWGC 9 cut(s) 31, 470, 998, 1481, 1496, 1688, 1697, 1700, 1787
ApoI RAATTY 4 cut(s) 1385, 1964, 1976, 2703
Asp700I GAANNNNTTC 1 cut(s) 1137
AspLEI GCGC 7 cut(s) 31, 56, 82, 162, 216, 2214, 2406
AspS9I GGNCC 1 cut(s) 2697
AsuC2I CCSGG 2 cut(s) 847, 1521
AsuHPI GGTGA 6 cut(s) 119, 529, 557, 590, 2069, 2075
AvaI CYCGRG 2 cut(s) 209, 979
BanI GGYRCC 2 cut(s) 388, 2211
BanII GRGCYC 2 cut(s) 1601, 2653
BarI GAAGNNNNNNTAC 4 cut(s) 2234, 2266, 2596, 2628
BbsI GAAGAC 1 cut(s) 1539
Bbv12I GWGCWC 4 cut(s) 1601, 2430, 2481, 2653
BbvCI CCTCAGC 1 cut(s) 741
BbvI GCAGC 9 cut(s) 18, 457, 985, 1483, 1493, 1675, 1687, 1709, 1774
BccI CCATC 9 cut(s) 570, 1075, 1195, 1387, 1412, 2048, 2223, 2662, 2713
BceAI ACGGC 7 cut(s) 6, 150, 214, 220, 1135, 1267, 1701
BcgI CGANNNNNNTGC 2 cut(s) 2468, 2502
BciT130I CCWGG 1 cut(s) 2209
BciVI GTATCC 1 cut(s) 613
BclI TGATCA 2 cut(s) 670, 2338
BcnI CCSGG 2 cut(s) 847, 1521
BcoDI GTCTC 3 cut(s) 522, 1676, 2139
BfaI CTAG 7 cut(s) 927, 1029, 1551, 1572, 1626, 2583, 2601
BfoI RGCGCY 2 cut(s) 217, 2215
BfuI GTATCC 1 cut(s) 613
BlpI GCTNAGC 3 cut(s) 360, 426, 1848
Bme1390I CCNGG 3 cut(s) 847, 1521, 2209
BmeT110I CYCGRG 2 cut(s) 209, 979
BmgT120I GGNCC 1 cut(s) 2697
BmiI GGNNCC 6 cut(s) 390, 946, 1017, 1062, 2213, 2514
BmrFI CCNGG 3 cut(s) 847, 1521, 2209
BoxI GACNNNNGTC 1 cut(s) 123
BpiI GAAGAC 1 cut(s) 1539
BplI GAGNNNNNCTC 6 cut(s) 80, 112, 1700, 1732, 1912, 1944
BpmI CTGGAG 3 cut(s) 212, 738, 1884
Bpu10I CCTNAGC 2 cut(s) 741, 1600
Bpu1102I GCTNAGC 3 cut(s) 360, 426, 1848
BpuEI CTTGAG 2 cut(s) 759, 1218
BpuMI CCSGG 2 cut(s) 847, 1521
BsaAI YACGTR 1 cut(s) 1835
BsaBI GATNNNNATC 3 cut(s) 1397, 2292, 2337
BsaHI GRCGYC 3 cut(s) 120, 2212, 2443
BsaI GGTCTC 1 cut(s) 2139
BsaJI CCNNGG 4 cut(s) 978, 1314, 1668, 2193
BsaWI WCCGGW 1 cut(s) 385
BsaXI ACNNNNNCTCC 2 cut(s) 1452, 1482
Bsc4I CCNNNNNNNGG 6 cut(s) 287, 542, 954, 1457, 1862, 2669
Bse118I RCCGGY 1 cut(s) 2430
Bse1I ACTGG 2 cut(s) 838, 2486
Bse3DI GCAATG 3 cut(s) 456, 1582, 1674
Bse8I GATNNNNATC 3 cut(s) 1397, 2292, 2337
BseBI CCWGG 1 cut(s) 2209
BseDI CCNNGG 4 cut(s) 978, 1314, 1668, 2193
BseGI GGATG 8 cut(s) 730, 736, 751, 963, 1201, 1423, 1477, 2479
BseJI GATNNNNATC 3 cut(s) 1397, 2292, 2337
BseLI CCNNNNNNNGG 6 cut(s) 287, 542, 954, 1457, 1862, 2669
BseMI GCAATG 3 cut(s) 456, 1582, 1674
BseMII CTCAG 8 cut(s) 351, 732, 1260, 1614, 1815, 1839, 2460, 2672
BseNI ACTGG 2 cut(s) 838, 2486
BseRI GAGGAG 4 cut(s) 122, 141, 1324, 1708
BseXI GCAGC 9 cut(s) 18, 457, 985, 1483, 1493, 1675, 1687, 1709, 1774
BseYI CCCAGC 1 cut(s) 1286
BsgI GTGCAG 2 cut(s) 621, 1794
Bsh1236I CGCG 4 cut(s) 29, 56, 80, 160
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 4 cut(s) 21, 1673, 2018, 2699
BshNI GGYRCC 2 cut(s) 388, 2211
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 4 cut(s) 1601, 2430, 2481, 2653
BsiHKCI CYCGRG 2 cut(s) 209, 979
BsiSI CCGG 4 cut(s) 386, 846, 1521, 2431
BslI CCNNNNNNNGG 6 cut(s) 287, 542, 954, 1457, 1862, 2669
BsmAI GTCTC 3 cut(s) 522, 1676, 2139
BsmBI CGTCTC 1 cut(s) 1676
BsmI GAATGC 2 cut(s) 2182, 2434
BsnI GGCC 4 cut(s) 21, 1673, 2018, 2699
Bso31I GGTCTC 1 cut(s) 2139
BsoBI CYCGRG 2 cut(s) 209, 979
Bsp1286I GDGCHC 4 cut(s) 1601, 2430, 2481, 2653
Bsp1720I GCTNAGC 3 cut(s) 360, 426, 1848
BspACI CCGC 4 cut(s) 112, 163, 2588, 2592
BspANI GGCC 4 cut(s) 21, 1673, 2018, 2699
BspCNI CTCAG 8 cut(s) 352, 733, 1261, 1613, 1816, 1840, 2461, 2671
BspFNI CGCG 4 cut(s) 29, 56, 80, 160
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 6 cut(s) 390, 946, 1017, 1062, 2213, 2514
BspPI GGATC 4 cut(s) 991, 1348, 1813, 2577
BspQI GCTCTTC 3 cut(s) 41, 2332, 2641
BspT107I GGYRCC 2 cut(s) 388, 2211
BspTNI GGTCTC 1 cut(s) 2139
BsrDI GCAATG 3 cut(s) 456, 1582, 1674
BsrFI RCCGGY 1 cut(s) 2430
BsrI ACTGG 2 cut(s) 838, 2486
BssAI RCCGGY 1 cut(s) 2430
BssECI CCNNGG 4 cut(s) 978, 1314, 1668, 2193
BssNI GRCGYC 3 cut(s) 120, 2212, 2443
BssT1I CCWWGG 3 cut(s) 1314, 1668, 2193
Bst2UI CCWGG 1 cut(s) 2209
Bst6I CTCTTC 8 cut(s) 41, 107, 341, 639, 2194, 2332, 2419, 2641
BstACI GRCGYC 3 cut(s) 120, 2212, 2443
BstAPI GCANNNNNTGC 1 cut(s) 797
BstBAI YACGTR 1 cut(s) 1835
BstC8I GCNNGC 5 cut(s) 158, 1256, 2165, 2360, 2590
BstF5I GGATG 8 cut(s) 730, 736, 751, 963, 1201, 1423, 1477, 2479
BstFNI CGCG 4 cut(s) 29, 56, 80, 160
BstH2I RGCGCY 2 cut(s) 217, 2215
BstHHI GCGC 7 cut(s) 31, 56, 82, 162, 216, 2214, 2406
BstMAI GTCTC 3 cut(s) 522, 1676, 2139
BstMCI CGRYCG 1 cut(s) 112
BstNI CCWGG 1 cut(s) 2209
BstPAI GACNNNNGTC 1 cut(s) 123
BstSCI CCNGG 3 cut(s) 845, 1519, 2207
BstUI CGCG 4 cut(s) 29, 56, 80, 160
BstV1I GCAGC 9 cut(s) 18, 457, 985, 1483, 1493, 1675, 1687, 1709, 1774
BstV2I GAAGAC 1 cut(s) 1539
BstX2I RGATCY 2 cut(s) 1340, 1805
BstXI CCANNNNNNTGG 1 cut(s) 2719
BstYI RGATCY 2 cut(s) 1340, 1805
BsuI GTATCC 1 cut(s) 613
BsuRI GGCC 4 cut(s) 21, 1673, 2018, 2699
BtsCI GGATG 8 cut(s) 730, 736, 751, 963, 1201, 1423, 1477, 2479
BtsI GCAGTG 2 cut(s) 993, 2413
BtsIMutI CAGTG 8 cut(s) 292, 664, 993, 1471, 2074, 2413, 2479, 2673
Cac8I GCNNGC 5 cut(s) 158, 1256, 2165, 2360, 2590
CaiI CAGNNNCTG 1 cut(s) 1862
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 7 cut(s) 31, 56, 82, 162, 216, 2214, 2406
Cfr10I RCCGGY 1 cut(s) 2430
Cfr13I GGNCC 1 cut(s) 2697
CseI GACGC 3 cut(s) 45, 2117, 2432
Csp6I GTAC 2 cut(s) 2025, 2251
CspCI CAANNNNNGTGG 6 cut(s) 126, 161, 472, 507, 1938, 1973
CviQI GTAC 2 cut(s) 2025, 2251
DinI GGCGCC 1 cut(s) 2213
DraI TTTAAA 2 cut(s) 1893, 2562
EaeI YGGCCR 1 cut(s) 19
Eam1104I CTCTTC 8 cut(s) 41, 107, 341, 639, 2194, 2332, 2419, 2641
EarI CTCTTC 8 cut(s) 41, 107, 341, 639, 2194, 2332, 2419, 2641
Ecl136II GAGCTC 2 cut(s) 1599, 2651
Eco130I CCWWGG 3 cut(s) 1314, 1668, 2193
Eco147I AGGCCT 1 cut(s) 2018
Eco24I GRGCYC 2 cut(s) 1601, 2653
Eco31I GGTCTC 1 cut(s) 2139
Eco47III AGCGCT 1 cut(s) 215
Eco53kI GAGCTC 2 cut(s) 1599, 2651
Eco57I CTGAAG 4 cut(s) 632, 1475, 1743, 2130
Eco88I CYCGRG 2 cut(s) 209, 979
EcoICRI GAGCTC 2 cut(s) 1599, 2651
EcoRII CCWGG 1 cut(s) 2207
EcoT14I CCWWGG 3 cut(s) 1314, 1668, 2193
EcoT22I ATGCAT 2 cut(s) 577, 751
EcoT38I GRGCYC 2 cut(s) 1601, 2653
EgeI GGCGCC 1 cut(s) 2213
EheI GGCGCC 1 cut(s) 2213
ErhI CCWWGG 3 cut(s) 1314, 1668, 2193
Esp3I CGTCTC 1 cut(s) 1676
FauI CCCGC 1 cut(s) 2581
FauNDI CATATG 1 cut(s) 316
FbaI TGATCA 2 cut(s) 670, 2338
FokI GGATG 8 cut(s) 737, 743, 758, 970, 1188, 1430, 1484, 2486
FriOI GRGCYC 2 cut(s) 1601, 2653
FspBI CTAG 7 cut(s) 927, 1029, 1551, 1572, 1626, 2583, 2601
GlaI GCGC 7 cut(s) 30, 55, 81, 161, 215, 2213, 2405
GsaI CCCAGC 1 cut(s) 1290
GsuI CTGGAG 3 cut(s) 212, 738, 1884
HaeII RGCGCY 2 cut(s) 217, 2215
HaeIII GGCC 4 cut(s) 21, 1673, 2018, 2699
HapII CCGG 4 cut(s) 386, 846, 1521, 2431
HgaI GACGC 3 cut(s) 45, 2117, 2432
HhaI GCGC 7 cut(s) 31, 56, 82, 162, 216, 2214, 2406
Hin1I GRCGYC 3 cut(s) 120, 2212, 2443
Hin6I GCGC 7 cut(s) 29, 54, 80, 160, 214, 2212, 2404
HinP1I GCGC 7 cut(s) 29, 54, 80, 160, 214, 2212, 2404
HincII GTYRAC 1 cut(s) 67
HindII GTYRAC 1 cut(s) 67
HindIII AAGCTT 1 cut(s) 2610
HpaII CCGG 4 cut(s) 386, 846, 1521, 2431
HphI GGTGA 6 cut(s) 119, 529, 557, 590, 2069, 2075
Hpy166II GTNNAC 4 cut(s) 67, 494, 1160, 1300
Hpy8I GTNNAC 4 cut(s) 67, 494, 1160, 1300
HpyCH4IV ACGT 3 cut(s) 120, 1834, 2726
HpySE526I ACGT 3 cut(s) 120, 1834, 2726
Hsp92I GRCGYC 3 cut(s) 120, 2212, 2443
HspAI GCGC 7 cut(s) 29, 54, 80, 160, 214, 2212, 2404
KasI GGCGCC 1 cut(s) 2211
Ksp22I TGATCA 2 cut(s) 670, 2338
LguI GCTCTTC 3 cut(s) 41, 2332, 2641
LmnI GCTCC 6 cut(s) 683, 944, 1021, 1060, 1933, 2656
Lsp1109I GCAGC 9 cut(s) 18, 457, 985, 1483, 1493, 1675, 1687, 1709, 1774
MaeI CTAG 7 cut(s) 927, 1029, 1551, 1572, 1626, 2583, 2601
MaeII ACGT 3 cut(s) 120, 1834, 2726
MaeIII GTNAC 6 cut(s) 23, 125, 841, 1008, 2063, 2408
MflI RGATCY 2 cut(s) 1340, 1805
MhlI GDGCHC 4 cut(s) 1601, 2430, 2481, 2653
Mly113I GGCGCC 1 cut(s) 2212
MlyI GAGTC 6 cut(s) 203, 1247, 1470, 1709, 1835, 2405
MmeI TCCRAC 6 cut(s) 219, 458, 480, 1438, 2547, 2623
Mph1103I ATGCAT 2 cut(s) 577, 751
MroXI GAANNNNTTC 1 cut(s) 1137
MseI TTAA 8 cut(s) 900, 909, 936, 1112, 1389, 1512, 1892, 2561
MslI CAYNNNNRTG 5 cut(s) 180, 570, 2223, 2454, 2717
MspA1I CMGCKG 2 cut(s) 470, 1700
MspI CCGG 4 cut(s) 386, 846, 1521, 2431
MspR9I CCNGG 3 cut(s) 847, 1521, 2209
Mva1269I GAATGC 2 cut(s) 2182, 2434
MvaI CCWGG 1 cut(s) 2209
MvnI CGCG 4 cut(s) 29, 56, 80, 160
NarI GGCGCC 1 cut(s) 2212
NciI CCSGG 2 cut(s) 847, 1521
NdeI CATATG 1 cut(s) 316
NlaIV GGNNCC 6 cut(s) 390, 946, 1017, 1062, 2213, 2514
NmeAIII GCCGAG 1 cut(s) 2419
NmuCI GTSAC 5 cut(s) 23, 125, 1008, 2063, 2408
NsiI ATGCAT 2 cut(s) 577, 751
OliI CACNNNNGTG 1 cut(s) 2454
PaeR7I CTCGAG 1 cut(s) 209
PagI TCATGA 1 cut(s) 1351
PceI AGGCCT 1 cut(s) 2018
PciSI GCTCTTC 3 cut(s) 41, 2332, 2641
PcsI WCGNNNNNNNCGW 4 cut(s) 84, 114, 2386, 2452
PctI GAATGC 2 cut(s) 2182, 2434
PdmI GAANNNNTTC 1 cut(s) 1137
PfeI GAWTC 5 cut(s) 403, 1280, 1516, 1859, 2204
PflMI CCANNNNNTGG 3 cut(s) 542, 1457, 1862
PleI GAGTC 6 cut(s) 202, 1246, 1469, 1709, 1834, 2405
PluTI GGCGCC 1 cut(s) 2215
PpsI GAGTC 6 cut(s) 202, 1246, 1469, 1709, 1834, 2405
Ppu21I YACGTR 1 cut(s) 1835
PshAI GACNNNNGTC 1 cut(s) 123
Psp124BI GAGCTC 2 cut(s) 1601, 2653
Psp1406I AACGTT 1 cut(s) 2726
Psp6I CCWGG 1 cut(s) 2207
PspFI CCCAGC 1 cut(s) 1286
PspGI CCWGG 1 cut(s) 2207
PspN4I GGNNCC 6 cut(s) 390, 946, 1017, 1062, 2213, 2514
PspPI GGNCC 1 cut(s) 2697
PstNI CAGNNNCTG 1 cut(s) 1862
PsuI RGATCY 2 cut(s) 1340, 1805
PvuII CAGCTG 2 cut(s) 470, 1700
RsaI GTAC 2 cut(s) 2026, 2252
RsaNI GTAC 2 cut(s) 2025, 2251
RseI CAYNNNNRTG 5 cut(s) 180, 570, 2223, 2454, 2717
SacI GAGCTC 2 cut(s) 1601, 2653
SapI GCTCTTC 3 cut(s) 41, 2332, 2641
SaqAI TTAA 8 cut(s) 900, 909, 936, 1112, 1389, 1512, 1892, 2561
Sau96I GGNCC 1 cut(s) 2697
SchI GAGTC 6 cut(s) 203, 1247, 1470, 1709, 1835, 2405
ScrFI CCNGG 3 cut(s) 847, 1521, 2209
SduI GDGCHC 4 cut(s) 1601, 2430, 2481, 2653
SfoI GGCGCC 1 cut(s) 2213
Sfr274I CTCGAG 1 cut(s) 209
SlaI CTCGAG 1 cut(s) 209
SmiMI CAYNNNNRTG 5 cut(s) 180, 570, 2223, 2454, 2717
SmlI CTYRAG 3 cut(s) 209, 774, 1233
SmoI CTYRAG 3 cut(s) 209, 774, 1233
SseBI AGGCCT 1 cut(s) 2018
SsiI CCGC 4 cut(s) 112, 163, 2588, 2592
SspDI GGCGCC 1 cut(s) 2211
SspMI CTAG 7 cut(s) 927, 1029, 1551, 1572, 1626, 2583, 2601
SstI GAGCTC 2 cut(s) 1601, 2653
StuI AGGCCT 1 cut(s) 2018
StyD4I CCNGG 3 cut(s) 845, 1519, 2207
StyI CCWWGG 3 cut(s) 1314, 1668, 2193
TaiI ACGT 3 cut(s) 123, 1837, 2729
TaqII GACCGA 1 cut(s) 2121
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 5 cut(s) 403, 1280, 1516, 1859, 2204
Tru1I TTAA 8 cut(s) 900, 909, 936, 1112, 1389, 1512, 1892, 2561
Tru9I TTAA 8 cut(s) 900, 909, 936, 1112, 1389, 1512, 1892, 2561
TscAI CASTG 8 cut(s) 292, 664, 1000, 1471, 2074, 2413, 2486, 2680
TseFI GTSAC 5 cut(s) 23, 125, 1008, 2063, 2408
TseI GCWGC 9 cut(s) 31, 470, 998, 1481, 1496, 1688, 1697, 1700, 1787
Tsp45I GTSAC 5 cut(s) 23, 125, 1008, 2063, 2408
TspGWI ACGGA 2 cut(s) 113, 642
TspRI CASTG 8 cut(s) 292, 664, 1000, 1471, 2074, 2413, 2486, 2680
Van91I CCANNNNNTGG 3 cut(s) 542, 1457, 1862
XapI RAATTY 4 cut(s) 1385, 1964, 1976, 2703
XcmI CCANNNNNNNNNTGG 1 cut(s) 1454
XhoI CTCGAG 1 cut(s) 209
XmnI GAANNNNTTC 1 cut(s) 1137
XspI CTAG 7 cut(s) 927, 1029, 1551, 1572, 1626, 2583, 2601
ZraI GACGTC 1 cut(s) 121
Zsp2I ATGCAT 2 cut(s) 577, 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.