RchiOBHm_Chr5g0075871

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0006832
Physical Location & Seq
Forward (+)
81614311 .. 81621884
7574 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35057

Sequence Viewer

Length: 4038 bp
ATGGACACGAATAATTGGAGGCCTCCTCAAGGTGGAGAGCCTGCGATGGATGCAGGAGATTGGAGGAGCCAATTACAGCAGGATTCGCGGCAGAGAATCGTCAATAAGATAATGGATACATTGAAGAGGCATCTTCCCTTCTCCGGTCAAGAGGGATTGCATGAACTCAAGAAAATTGCTGTTAGGTTTGAGGAAAAGATTTATACTGCTGCTACAAGCCAGTCGGATTATCTACGGAAAATTTCTCTGAAAATGCTCACTATGGAGACCAAGTCTCAGAACACAATTGGCACTTCTTTACCAAGCAACTCTGCTGGTAATAGTAACAGGCCCCCTGATCCAGGATCTTTCATGCAACCCCAAGTTCCCAATCAAGGACAGTCACTCCCTATGCCAGTGCCAGCCAATCAATCTCAACCACGCCAACAACTCTTATCACAGAACATTCAGAATAACATTCCGCCCAATTCTGCTGGCTTATCATCTGCATTATCTCCTGCATCTGGGCTCACCCAGACTCCTGTACCGAGTATTGTTGGAAATGCAAACTTGCAAAGTATGTCGGGGACATCACAGAATTCATTGGGGAACTCCATCGGCCAGGGGGTAACTTCAAATATGTTTGCTAATTCCCAAAGGCAAATGCCAGGACGACAACAGGTAGTTCCGCAGCAGCAACAGCAGCAAACCCAGAATTCACAGCAGTATATGTACCAGCAACAGTTACAACAACAGCTCATGAAGCCAAAATTTCAGCAGCAGGGAAACATCCAACTTGTGCCAAATCATATGCAACAGCAACAACAGCAGCAGCAGAACTTACTGCAATCACCTCAGTTGCAATCTTCTCAGCAATCTGTTATGCAACCTCCTGCAGTGCAGTCGTCTCTCTCTAGTCTTCAGCAGAATCAACAATCTGCTATGCAACACTCTTCACAAGCCATGCTTCAGCAGCATCCTCAATCTGTTCTGCGGCAGCAACAGCAGCCTCAACAGTCTTCTGTTGTTCATCAGCAGCAAACACCAATCCCACAGCAGCCAATACTGCCCCCACAGCAGCAGCAGCAACAGCCACAGCTTATGGTGCAACAGCCAAATTCAACAAACTTGCCGCAGAATCAGCTTATTGGACAACAAAACAATGTAGGGGACATGCAGCAACAGCAACAGCAACAGCAACAGCAAAGGTTACTAAGCCAGCAGAATAATATGTTAAACTTGCAACAGCAGCAGCAGCAACAACAACACCAATTAATGGCTCAGCAAAACAACCTCTCAAATATGCATCAGCAACAGTTGGGCACTCAGAGTAATGTTACTGGATTACAGCAACAGCAGCACCTTGGTACTCAAACTGGTAACTCAAGCATGCAAACTAATCAGCACTCTGCACACATGCTGCAATCCAAGGTTCAGCAACAACATCAGAGTCCAGCATTACAAGGACATCAGTCCCAACCTCAGGTGTCACAGCAACAATTATTATCACAGATTCAATCTCAGCCTGCACAGATACAACAACAGATGGGTATGCAACAGCAATCAAACCCGCTACAACGAGATATGCAGCAAAGGATCCAAGCATCAGGTCAGGTATCAGGATCCATGCTTCAACCACCAAATGTAATGGATCCGCAAAAGCAGTTATATCAAGCTCAAAGAGCCCTTCCTGAGACGTCATCAACGTCTCTAGATTCCACAGCCCAGACTGGACATACAAATGGTGCTGATTGGCAAGAGGAGGTCTATCAAAAGATCAAAGTCATGAAGGATATGTACTACCCCGAACTAAGTGAAATGTACCAAAAAATTGCTTCTAAACTTCATCAGCACGACTCCCTTCCACAACAGCCAAAGTCAGATCAGCTTGAGAAGCTGAAGATGTTTAAGACCATGCTGGAGCGCCTGATAACAGTCTTACAAATTTCCAAAACTAGCATAACACCTGGTTTGAAGGAGAAGTTGGGTTTATACGAGAAGCAGATAATAAATTTTATTAATACAAATAGACCCAGGAAGCCTGTTTCTTCTCTGCCGCCAGGGCAGCTCCCCCCACCGCATATGCAGTCCATGCAGCAGTCACAATCCCAGATTACTCAAGTGCAATCTCATGAAAATCAGATGAACCCACAATTGCAATCCCTGAACTTGCAAGGTTCTGTGCCAACAATGCAGCAGAACAATATGACAGGCTTGCAGCAAAATTCTATGTCTTCTTTATCTGGGGTTTCAACAGCACAGCAAAACATGATGAATCCGTTGCAGCCAAGTTCCAATATGGATCCAGGACAAGGAACCACACTGAACTCACTGCAGCAGGTCCCTGTGGGCTCTATCCAACAGACTCCTGTCAGTGCTCCCCAACAAGCTAACATGAATGCCTTATCATCACAGAATGGGATTAACATGCTGCAGAGCAACATTAATCCCCTTCAGTCAAATTCTGGTATGCTTCATAGCCAACATCTGAAACAGCAGGAACAGCAATTGTATCAGAATCAACTCAAGCAACAACAATTTCAACAACGACAGATGCAGCAGCAGCAGTTGATGCAGAAGCAGATAATTCAACAACAACAGCAGCAGCAACAGCAACAGCAACAACAGCTACAACAGCAAGCAAAGCAGCAGCTGCCTGGACAGTTGCAGGCACACCAAATGTCACAGCTTCACCAAATCAGTGATGTTAATGATGTGAAAATAAGGCCGGGGATGGGTGTTAAGCCAGGGGCCTTTCAGCAACAAATGTCTGTAGGCCAGCGTGCTTATCCTCATTCACAATTAAAACCGGGATCTCCATATCCTATCACATCAAGCAACCAACTCCTTCAGGCTCAATCTCCTCAACTGTCACAGCATTCTTCTCCACAAATTGACCAGCAGTTGTTAGTCCCAAAAGCTCAAAATGCTAGTTCACCATTTGTCATCCCATCTCCTTCAACTCCCATAGCTCCATCACCTATGCCAGGAGATTCAGAGAAACCTTCCTCACTCGCAAATGCTGGGAATGTTGGACATCAACAAACAACTGTTGTCGGAGCTCAGGTCCAGTCCCTTGCCATCGGCACCCCTGGGATATCAGCCTCTCCTTTGCTTGCTGAATTTATTGGTCCAGATGGCACTCATGCTAATGCTTTGTCAGCTATATCTGGCAAGTCAAGTGTTACAGAGCAACCTCTTGAACGCTTGATTAAAGCGGTCAAGTCAATATCGCCAAAGGCATTAAGTGCATCTGTCAGTGACATAGGCTCAGTAGTGAGTATGATTGATAGGATAGCAGGTTCAGCACCAGGTAATGGATCTAGAGCTGCAGTTGGTGAGGATCTGGTTGCTATGACAAAATGTCGTCTACAGGCGAGAAACTTCATCACTCATGATGGAACAACAAATGGGACAAGGAAAATGAGGCGATACACCAGTGCCATGCCCTTAAATGTTGTGTCATCAGGTGGCAGCATGAATGATAGTTTCAAGCAGTTGACCTGTTCAGAGACATCTGACCTGGAGTCAACTGCAACGTCTCGTATCAAAAGGCCTAGGATTGAGGCTAATCATGCTCTTATGGAAGAAATAAGAGAAATAAATCGGCGGCTTATAGATACAGTTGTTGATATCAGTGATGAAGATGTTGATCCAAGTGCGGCTGCTGCTGAAGGGGGTGAAGGAACCATCGTCAAGTGCTCTTTTGATGCTGTGGCTCTCAGTCCCAACTTGAAATCGCAGTATGCTTCAGCACAAATGTCTCCGATTCAGCCATTAAGACTGCTTGTTCCGACAAATTATCCCAACTGCTCTCCAATACTGTTAGACAAGTTTCCGGTTGAAGTCAGTAAGGAGTATGAAGATCTTTCTGTGAAGGCAAAATCAAGGTTTAGCATCTCTTTACGAAGCATTTCGCAGCCCATGTCCCTTGGGGAGATAGCAAGGGCTTGGGATAATTGTGCACGTACAGTTATTTCTGAGCATGCACAGCGAAGTGGTGGAGGCAGCTTCAGCTCAAAGTATGGGACATGGGAGAACTGCCTGAGTGCCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

1345

Amino Acids

148.5

Weight (kDa)

9.4

Isoelectric Point (pI)

71.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 19 - 97 2.1e-35 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1679
Acc36I ACCTGC 2 cut(s) 2308, 3269
AccB1I GGYRCC 1 cut(s) 3065
AccB7I CCANNNNNTGG 2 cut(s) 1255, 3296
AccI GTMKAC 1 cut(s) 3349
AccII CGCG 1 cut(s) 88
AcoI YGGCCR 1 cut(s) 598
AcuI CTGAAG 8 cut(s) 884, 932, 1898, 2417, 2813, 3672, 3714, 3976
AcyI GRCGYC 1 cut(s) 1676
AfaI GTAC 6 cut(s) 525, 713, 1348, 1778, 1802, 3949
AhdI GACNNNNNGTC 2 cut(s) 3342, 3505
AjuI GAANNNNNNNTTGG 2 cut(s) 1946, 1978
AloI GAACNNNNNNTCC 2 cut(s) 3265, 3297
Alw21I GWGCWC 4 cut(s) 2359, 3043, 3683, 3946
Alw26I GTCTC 8 cut(s) 260, 279, 891, 1667, 1692, 3485, 3525, 3747
Alw44I GTGCAC 1 cut(s) 3942
AlwNI CAGNNNCTG 1 cut(s) 2632
AoxI GGCC 7 cut(s) 20, 329, 598, 2705, 2730, 2755, 3533
ApaLI GTGCAC 1 cut(s) 3942
AseI ATTAAT 3 cut(s) 1253, 1998, 2424
Asp700I GAANNNNTTC 1 cut(s) 3892
AspA2I CCTAGG 1 cut(s) 3536
AspLEI GCGC 1 cut(s) 1905
AspS9I GGNCC 5 cut(s) 330, 2320, 2730, 3046, 3110
AsuC2I CCSGG 2 cut(s) 2709, 2790
AsuHPI GGTGA 7 cut(s) 502, 822, 2663, 2907, 2949, 3329, 3671
AvaII GGWCC 3 cut(s) 2320, 3046, 3110
AvrII CCTAGG 1 cut(s) 3536
AxyI CCTNAGG 1 cut(s) 1461
BaeGI GKGCMC 2 cut(s) 1304, 3946
BaeI ACNNNNGTAYC 6 cut(s) 507, 540, 3403, 3436, 3591, 3624
BamHI GGATCC 4 cut(s) 1575, 1601, 1630, 2281
BanI GGYRCC 1 cut(s) 3065
BanII GRGCYC 4 cut(s) 510, 1666, 2333, 3043
BarI GAAGNNNNNNTAC 2 cut(s) 1760, 1792
BbsI GAAGAC 3 cut(s) 890, 990, 2205
Bbv12I GWGCWC 4 cut(s) 2359, 3043, 3683, 3946
BcgI CGANNNNNNTGC 2 cut(s) 864, 898
BciVI GTATCC 1 cut(s) 109
BcnI CCSGG 2 cut(s) 2709, 2790
BcoDI GTCTC 8 cut(s) 260, 279, 891, 1667, 1692, 3485, 3525, 3747
BfaI CTAG 6 cut(s) 894, 1691, 1935, 2910, 3303, 3537
BfmI CTRYAG 6 cut(s) 873, 2312, 2411, 2751, 3309, 3350
BfoI RGCGCY 1 cut(s) 1906
BfuAI ACCTGC 2 cut(s) 2308, 3269
BfuI GTATCC 1 cut(s) 109
BglI GCCNNNNNGGC 1 cut(s) 2041
BglII AGATCT 1 cut(s) 3844
BlnI CCTAGG 1 cut(s) 3536
BlpI GCTNAGC 1 cut(s) 1260
Bme18I GGWCC 3 cut(s) 2320, 3046, 3110
BmeRI GACNNNNNGTC 2 cut(s) 3342, 3505
BmgT120I GGNCC 5 cut(s) 330, 2320, 2730, 3046, 3110
BoxI GACNNNNGTC 2 cut(s) 1450, 2348
BpiI GAAGAC 3 cut(s) 890, 990, 2205
BplI GAGNNNNNCTC 2 cut(s) 10, 42
BpmI CTGGAG 2 cut(s) 1919, 3524
Bpu10I CCTNAGC 1 cut(s) 3042
Bpu1102I GCTNAGC 1 cut(s) 1260
BpuEI CTTGAG 6 cut(s) 12, 152, 1348, 1889, 2082, 2489
BpuMI CCSGG 2 cut(s) 2709, 2790
BsaAI YACGTR 1 cut(s) 3947
BsaBI GATNNNNATC 1 cut(s) 3630
BsaHI GRCGYC 1 cut(s) 1676
BsaI GGTCTC 1 cut(s) 260
BsaWI WCCGGW 2 cut(s) 143, 3817
BsaXI ACNNNNNCTCC 8 cut(s) 257, 287, 369, 399, 502, 532, 3030, 3060
Bse1I ACTGG 7 cut(s) 220, 395, 1324, 1360, 1714, 3049, 3417
Bse21I CCTNAGG 1 cut(s) 1461
Bse8I GATNNNNATC 1 cut(s) 3630
BseGI GGATG 5 cut(s) 55, 768, 955, 2718, 2925
BseJI GATNNNNATC 1 cut(s) 3630
BseNI ACTGG 7 cut(s) 220, 395, 1324, 1360, 1714, 3049, 3417
BseRI GAGGAG 4 cut(s) 15, 79, 1754, 2832
BseSI GKGCMC 2 cut(s) 1304, 3946
BseYI CCCAGC 1 cut(s) 3002
BsgI GTGCAG 3 cut(s) 899, 1374, 1491
Bsh1236I CGCG 1 cut(s) 88
BshFI GGCC 7 cut(s) 22, 331, 600, 2707, 2732, 2757, 3535
BshNI GGYRCC 1 cut(s) 3065
BsiHKAI GWGCWC 4 cut(s) 2359, 3043, 3683, 3946
BsiSI CCGG 4 cut(s) 144, 2708, 2789, 3818
BsmAI GTCTC 8 cut(s) 260, 279, 891, 1667, 1692, 3485, 3525, 3747
BsmBI CGTCTC 4 cut(s) 891, 1667, 1692, 3525
BsmI GAATGC 2 cut(s) 2383, 2857
BsnI GGCC 7 cut(s) 22, 331, 600, 2707, 2732, 2757, 3535
Bso31I GGTCTC 1 cut(s) 260
Bsp1286I GDGCHC 8 cut(s) 510, 1304, 1666, 2333, 2359, 3043, 3683, 3946
Bsp1720I GCTNAGC 1 cut(s) 1260
BspANI GGCC 7 cut(s) 22, 331, 600, 2707, 2732, 2757, 3535
BspFNI CGCG 1 cut(s) 88
BspHI TCATGA 4 cut(s) 738, 1764, 2110, 3373
BspMAI CTGCAG 4 cut(s) 877, 2316, 2415, 3313
BspMI ACCTGC 2 cut(s) 2308, 3269
BspT107I GGYRCC 1 cut(s) 3065
BspTNI GGTCTC 1 cut(s) 260
BsrI ACTGG 7 cut(s) 220, 395, 1324, 1360, 1714, 3049, 3417
BssNI GRCGYC 1 cut(s) 1676
BssT1I CCWWGG 4 cut(s) 1342, 1407, 3536, 3910
Bst6I CTCTTC 2 cut(s) 119, 937
BstACI GRCGYC 1 cut(s) 1676
BstAPI GCANNNNNTGC 4 cut(s) 2071, 2551, 2632, 3227
BstBAI YACGTR 1 cut(s) 3947
BstENI CCTNNNNNAGG 3 cut(s) 27, 339, 2964
BstF5I GGATG 5 cut(s) 55, 768, 955, 2718, 2925
BstFNI CGCG 1 cut(s) 88
BstH2I RGCGCY 1 cut(s) 1906
BstHHI GCGC 1 cut(s) 1905
BstMAI GTCTC 8 cut(s) 260, 279, 891, 1667, 1692, 3485, 3525, 3747
BstNSI RCATGY 5 cut(s) 1156, 1372, 1399, 2410, 3968
BstPAI GACNNNNGTC 2 cut(s) 1450, 2348
BstSFI CTRYAG 6 cut(s) 873, 2312, 2411, 2751, 3309, 3350
BstSLI GKGCMC 2 cut(s) 1304, 3946
BstUI CGCG 1 cut(s) 88
BstV2I GAAGAC 3 cut(s) 890, 990, 2205
BstX2I RGATCY 9 cut(s) 344, 1575, 1601, 1630, 2281, 2792, 3299, 3322, 3844
BstYI RGATCY 9 cut(s) 344, 1575, 1601, 1630, 2281, 2792, 3299, 3322, 3844
Bsu36I CCTNAGG 1 cut(s) 1461
BsuI GTATCC 1 cut(s) 109
BsuRI GGCC 7 cut(s) 22, 331, 600, 2707, 2732, 2757, 3535
BtgZI GCGATG 1 cut(s) 59
BtsCI GGATG 5 cut(s) 55, 768, 955, 2718, 2925
BtsI GCAGTG 2 cut(s) 882, 2309
BtsIMutI CAGTG 9 cut(s) 402, 882, 2300, 2309, 2359, 2686, 3244, 3424, 3622
BveI ACCTGC 2 cut(s) 2308, 3269
CaiI CAGNNNCTG 1 cut(s) 2632
CciI TCATGA 4 cut(s) 738, 1764, 2110, 3373
CfoI GCGC 1 cut(s) 1905
Cfr13I GGNCC 5 cut(s) 330, 2320, 2730, 3046, 3110
CsiI ACCWGGT 2 cut(s) 1945, 3289
Csp6I GTAC 6 cut(s) 524, 712, 1347, 1777, 1801, 3948
CviQI GTAC 6 cut(s) 524, 712, 1347, 1777, 1801, 3948
DriI GACNNNNNGTC 2 cut(s) 3342, 3505
EaeI YGGCCR 1 cut(s) 598
Eam1104I CTCTTC 2 cut(s) 119, 937
Eam1105I GACNNNNNGTC 2 cut(s) 3342, 3505
EarI CTCTTC 2 cut(s) 119, 937
EciI GGCGGA 1 cut(s) 450
Ecl136II GAGCTC 1 cut(s) 3041
Eco130I CCWWGG 4 cut(s) 1342, 1407, 3536, 3910
Eco147I AGGCCT 2 cut(s) 22, 3535
Eco24I GRGCYC 4 cut(s) 510, 1666, 2333, 3043
Eco31I GGTCTC 1 cut(s) 260
Eco32I GATATC 2 cut(s) 3078, 3613
Eco47I GGWCC 3 cut(s) 2320, 3046, 3110
Eco53kI GAGCTC 1 cut(s) 3041
Eco57I CTGAAG 8 cut(s) 884, 932, 1898, 2417, 2813, 3672, 3714, 3976
Eco81I CCTNAGG 1 cut(s) 1461
EcoICRI GAGCTC 1 cut(s) 3041
EcoNI CCTNNNNNAGG 3 cut(s) 27, 339, 2964
EcoO109I RGGNCCY 3 cut(s) 330, 2320, 2730
EcoRI GAATTC 2 cut(s) 577, 694
EcoRV GATATC 2 cut(s) 3078, 3613
EcoT14I CCWWGG 4 cut(s) 1342, 1407, 3536, 3910
EcoT22I ATGCAT 1 cut(s) 1287
EcoT38I GRGCYC 4 cut(s) 510, 1666, 2333, 3043
ErhI CCWWGG 4 cut(s) 1342, 1407, 3536, 3910
Esp3I CGTCTC 4 cut(s) 891, 1667, 1692, 3525
FalI AAGNNNNNCTT 2 cut(s) 930, 962
FauI CCCGC 1 cut(s) 1557
FauNDI CATATG 2 cut(s) 789, 2061
FblI GTMKAC 1 cut(s) 3349
FokI GGATG 5 cut(s) 62, 755, 942, 2725, 2912
FriOI GRGCYC 4 cut(s) 510, 1666, 2333, 3043
FspBI CTAG 6 cut(s) 894, 1691, 1935, 2910, 3303, 3537
GlaI GCGC 1 cut(s) 1904
GsaI CCCAGC 1 cut(s) 3006
GsuI CTGGAG 2 cut(s) 1919, 3524
HaeII RGCGCY 1 cut(s) 1906
HaeIII GGCC 7 cut(s) 22, 331, 600, 2707, 2732, 2757, 3535
HapII CCGG 4 cut(s) 144, 2708, 2789, 3818
HhaI GCGC 1 cut(s) 1905
Hin1I GRCGYC 1 cut(s) 1676
Hin6I GCGC 1 cut(s) 1903
HinP1I GCGC 1 cut(s) 1903
HincII GTYRAC 2 cut(s) 3480, 3510
HindII GTYRAC 2 cut(s) 3480, 3510
HpaII CCGG 4 cut(s) 144, 2708, 2789, 3818
HphI GGTGA 7 cut(s) 502, 822, 2663, 2907, 2949, 3329, 3671
Hpy166II GTNNAC 5 cut(s) 2915, 3350, 3480, 3510, 3944
Hpy8I GTNNAC 5 cut(s) 2915, 3350, 3480, 3510, 3944
HpyCH4IV ACGT 4 cut(s) 1676, 1685, 3518, 3946
HpySE526I ACGT 4 cut(s) 1676, 1685, 3518, 3946
Hsp92I GRCGYC 1 cut(s) 1676
HspAI GCGC 1 cut(s) 1903
LmnI GCTCC 6 cut(s) 66, 1900, 2052, 2362, 2956, 3038
MabI ACCWGGT 2 cut(s) 1945, 3289
MaeI CTAG 6 cut(s) 894, 1691, 1935, 2910, 3303, 3537
MaeII ACGT 4 cut(s) 1676, 1685, 3518, 3946
MfeI CAATTG 3 cut(s) 285, 2132, 2486
MflI RGATCY 9 cut(s) 344, 1575, 1601, 1630, 2281, 2792, 3299, 3322, 3844
MhlI GDGCHC 8 cut(s) 510, 1304, 1666, 2333, 2359, 3043, 3683, 3946
MlyI GAGTC 5 cut(s) 511, 1438, 1829, 2338, 3515
MmeI TCCRAC 7 cut(s) 204, 517, 796, 2362, 2992, 3016, 3797
Mph1103I ATGCAT 1 cut(s) 1287
MroXI GAANNNNTTC 1 cut(s) 3892
MslI CAYNNNNRTG 2 cut(s) 1719, 3129
MspA1I CMGCKG 1 cut(s) 2632
MspI CCGG 4 cut(s) 144, 2708, 2789, 3818
MunI CAATTG 3 cut(s) 285, 2132, 2486
Mva1269I GAATGC 2 cut(s) 2383, 2857
MvnI CGCG 1 cut(s) 88
NciI CCSGG 2 cut(s) 2709, 2790
NdeI CATATG 2 cut(s) 789, 2061
NmuCI GTSAC 6 cut(s) 381, 1467, 2079, 2661, 2850, 3239
NsiI ATGCAT 1 cut(s) 1287
NspI RCATGY 5 cut(s) 1156, 1372, 1399, 2410, 3968
PaeI GCATGC 2 cut(s) 1372, 3968
PagI TCATGA 4 cut(s) 738, 1764, 2110, 3373
PasI CCCWGGG 1 cut(s) 3071
PceI AGGCCT 2 cut(s) 22, 3535
PcsI WCGNNNNNNNCGW 1 cut(s) 1682
PctI GAATGC 2 cut(s) 2383, 2857
PdmI GAANNNNTTC 1 cut(s) 3892
PflFI GACNNNGTC 1 cut(s) 271
PflMI CCANNNNNTGG 2 cut(s) 1255, 3296
PfoI TCCNGGA 2 cut(s) 340, 2284
PleI GAGTC 5 cut(s) 511, 1437, 1829, 2338, 3514
PpsI GAGTC 5 cut(s) 511, 1437, 1829, 2338, 3514
Ppu21I YACGTR 1 cut(s) 3947
PpuMI RGGWCCY 1 cut(s) 2320
PshAI GACNNNNGTC 2 cut(s) 1450, 2348
PshBI ATTAAT 3 cut(s) 1253, 1998, 2424
Psp124BI GAGCTC 1 cut(s) 3043
Psp5II RGGWCCY 1 cut(s) 2320
PspFI CCCAGC 1 cut(s) 3002
PspPI GGNCC 5 cut(s) 330, 2320, 2730, 3046, 3110
PspPPI RGGWCCY 1 cut(s) 2320
PstI CTGCAG 4 cut(s) 877, 2316, 2415, 3313
PstNI CAGNNNCTG 1 cut(s) 2632
PsuI RGATCY 9 cut(s) 344, 1575, 1601, 1630, 2281, 2792, 3299, 3322, 3844
PsyI GACNNNGTC 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 2632
RsaI GTAC 6 cut(s) 525, 713, 1348, 1778, 1802, 3949
RsaNI GTAC 6 cut(s) 524, 712, 1347, 1777, 1801, 3948
RseI CAYNNNNRTG 2 cut(s) 1719, 3129
SacI GAGCTC 1 cut(s) 3043
Sau96I GGNCC 5 cut(s) 330, 2320, 2730, 3046, 3110
SchI GAGTC 5 cut(s) 511, 1438, 1829, 2338, 3515
SduI GDGCHC 8 cut(s) 510, 1304, 1666, 2333, 2359, 3043, 3683, 3946
SexAI ACCWGGT 2 cut(s) 1945, 3289
SfcI CTRYAG 6 cut(s) 873, 2312, 2411, 2751, 3309, 3350
SinI GGWCC 3 cut(s) 2320, 3046, 3110
SmiMI CAYNNNNRTG 2 cut(s) 1719, 3129
SmlI CTYRAG 6 cut(s) 27, 167, 1363, 1868, 2097, 2504
SmoI CTYRAG 6 cut(s) 27, 167, 1363, 1868, 2097, 2504
SphI GCATGC 2 cut(s) 1372, 3968
SseBI AGGCCT 2 cut(s) 22, 3535
SspMI CTAG 6 cut(s) 894, 1691, 1935, 2910, 3303, 3537
SstI GAGCTC 1 cut(s) 3043
StuI AGGCCT 2 cut(s) 22, 3535
StyI CCWWGG 4 cut(s) 1342, 1407, 3536, 3910
TaiI ACGT 4 cut(s) 1679, 1688, 3521, 3949
TatI WGTACW 1 cut(s) 1776
TauI GCSGC 7 cut(s) 91, 976, 1114, 2038, 3592, 3644, 4034
TscAI CASTG 9 cut(s) 402, 882, 2307, 2316, 2359, 2686, 3244, 3424, 3622
TseFI GTSAC 6 cut(s) 381, 1467, 2079, 2661, 2850, 3239
Tsp45I GTSAC 6 cut(s) 381, 1467, 2079, 2661, 2850, 3239
TspGWI ACGGA 2 cut(s) 250, 2247
TspRI CASTG 9 cut(s) 402, 882, 2307, 2316, 2359, 2686, 3244, 3424, 3622
Tth111I GACNNNGTC 1 cut(s) 271
Van91I CCANNNNNTGG 2 cut(s) 1255, 3296
VneI GTGCAC 1 cut(s) 3942
VpaK11BI GGWCC 3 cut(s) 2320, 3046, 3110
VspI ATTAAT 3 cut(s) 1253, 1998, 2424
XagI CCTNNNNNAGG 3 cut(s) 27, 339, 2964
XbaI TCTAGA 2 cut(s) 1690, 3302
XceI RCATGY 5 cut(s) 1156, 1372, 1399, 2410, 3968
XmaJI CCTAGG 1 cut(s) 3536
XmiI GTMKAC 1 cut(s) 3349
XmnI GAANNNNTTC 1 cut(s) 3892
XspI CTAG 6 cut(s) 894, 1691, 1935, 2910, 3303, 3537
ZraI GACGTC 1 cut(s) 1677
Zsp2I ATGCAT 1 cut(s) 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.