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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32920 |
| malus_domestica | MD15G1067700.v1.1 |
| prunus_persica | Prupe.1G421600_v2.0.a1 |
| pyrus_communis | pycom08g06650 pycom15g06420 |
| rosa_chinensis | RchiOBHm_Chr6g0309801 |
| rosa_laevigata | RLG00000010535 |
| rosa_multiflora | Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159170 |
| rosa_rugosa | Rorug06G0374700 Rorug06G0374800 Rorug06G0374900 |
| rosa_samantha | Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700 |
| rosa_wichuraiana | Rw6G042520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 54, 246 |
| AccB1I | GGYRCC | 3 cut(s) | 54, 246, 881 |
| AccBSI | CCGCTC | 3 cut(s) | 52, 73, 244 |
| AclWI | GGATC | 2 cut(s) | 180, 291 |
| AcoI | YGGCCR | 1 cut(s) | 329 |
| AcsI | RAATTY | 1 cut(s) | 607 |
| AcuI | CTGAAG | 2 cut(s) | 65, 1542 |
| AfaI | GTAC | 2 cut(s) | 56, 248 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 1732 |
| AflII | CTTAAG | 1 cut(s) | 712 |
| AgsI | TTSAA | 3 cut(s) | 485, 593, 1778 |
| AjnI | CCWGG | 2 cut(s) | 884, 1725 |
| AluBI | AGCT | 4 cut(s) | 43, 235, 545, 602 |
| AluI | AGCT | 4 cut(s) | 43, 235, 545, 602 |
| AlwI | GGATC | 2 cut(s) | 180, 291 |
| ApoI | RAATTY | 1 cut(s) | 607 |
| Asp718I | GGTACC | 2 cut(s) | 54, 246 |
| AspLEI | GCGC | 3 cut(s) | 130, 181, 292 |
| AspS9I | GGNCC | 6 cut(s) | 1040, 1124, 1208, 1292, 1376, 1460 |
| AsuC2I | CCSGG | 2 cut(s) | 333, 1585 |
| BanI | GGYRCC | 3 cut(s) | 54, 246, 881 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbvCI | CCTCAGC | 6 cut(s) | 956, 1034, 1202, 1286, 1370, 1454 |
| BccI | CCATC | 5 cut(s) | 337, 712, 716, 944, 1751 |
| BciT130I | CCWGG | 2 cut(s) | 886, 1727 |
| BcnI | CCSGG | 2 cut(s) | 333, 1585 |
| BfaI | CTAG | 1 cut(s) | 603 |
| BfrI | CTTAAG | 1 cut(s) | 712 |
| BisI | GCNGC | 1 cut(s) | 365 |
| BlsI | GCNGC | 1 cut(s) | 366 |
| Bme1390I | CCNGG | 4 cut(s) | 333, 886, 1585, 1727 |
| BmgT120I | GGNCC | 6 cut(s) | 1040, 1124, 1208, 1292, 1376, 1460 |
| BmrFI | CCNGG | 4 cut(s) | 333, 886, 1585, 1727 |
| BpmI | CTGGAG | 2 cut(s) | 23, 215 |
| Bpu10I | CCTNAGC | 7 cut(s) | 956, 966, 1034, 1202, 1286, 1370, 1454 |
| BpuMI | CCSGG | 2 cut(s) | 333, 1585 |
| BsaI | GGTCTC | 1 cut(s) | 1574 |
| BsaJI | CCNNGG | 3 cut(s) | 783, 885, 1669 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1639, 1669 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 1732 |
| Bse118I | RCCGGY | 1 cut(s) | 16 |
| Bse3DI | GCAATG | 1 cut(s) | 1768 |
| BseBI | CCWGG | 2 cut(s) | 886, 1727 |
| BseDI | CCNNGG | 3 cut(s) | 783, 885, 1669 |
| BseGI | GGATG | 6 cut(s) | 646, 723, 727, 825, 1582, 1639 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 1732 |
| BseMI | GCAATG | 1 cut(s) | 1768 |
| BseMII | CTCAG | 8 cut(s) | 242, 947, 1025, 1193, 1277, 1361, 1445, 1608 |
| BseX3I | CGGCCG | 1 cut(s) | 329 |
| Bsh1285I | CGRYCG | 1 cut(s) | 332 |
| BshNI | GGYRCC | 3 cut(s) | 54, 246, 881 |
| BsiEI | CGRYCG | 1 cut(s) | 332 |
| BsiSI | CCGG | 4 cut(s) | 17, 332, 368, 1584 |
| BslFI | GGGAC | 3 cut(s) | 722, 824, 926 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 1732 |
| BsmFI | GGGAC | 3 cut(s) | 722, 824, 926 |
| Bso31I | GGTCTC | 1 cut(s) | 1574 |
| Bsp143I | GATC | 2 cut(s) | 172, 283 |
| Bsp19I | CCATGG | 1 cut(s) | 1669 |
| BspCNI | CTCAG | 8 cut(s) | 243, 948, 1026, 1194, 1278, 1362, 1446, 1609 |
| BspPI | GGATC | 2 cut(s) | 180, 291 |
| BspQI | GCTCTTC | 2 cut(s) | 347, 535 |
| BspT107I | GGYRCC | 3 cut(s) | 54, 246, 881 |
| BspTI | CTTAAG | 1 cut(s) | 712 |
| BspTNI | GGTCTC | 1 cut(s) | 1574 |
| BsrBI | CCGCTC | 3 cut(s) | 52, 73, 244 |
| BsrDI | GCAATG | 1 cut(s) | 1768 |
| BsrFI | RCCGGY | 1 cut(s) | 16 |
| BssAI | RCCGGY | 1 cut(s) | 16 |
| BssECI | CCNNGG | 3 cut(s) | 783, 885, 1669 |
| BssMI | GATC | 2 cut(s) | 172, 283 |
| BssT1I | CCWWGG | 2 cut(s) | 783, 1669 |
| Bst2UI | CCWGG | 2 cut(s) | 886, 1727 |
| Bst4CI | ACNGT | 2 cut(s) | 411, 1641 |
| Bst6I | CTCTTC | 5 cut(s) | 300, 347, 377, 535, 783 |
| BstAFI | CTTAAG | 1 cut(s) | 712 |
| BstC8I | GCNNGC | 3 cut(s) | 18, 126, 273 |
| BstDEI | CTNAG | 9 cut(s) | 251, 956, 966, 1034, 1202, 1286, 1370, 1454, 1617 |
| BstDSI | CCRYGG | 1 cut(s) | 1669 |
| BstF5I | GGATG | 6 cut(s) | 646, 723, 727, 825, 1582, 1639 |
| BstHHI | GCGC | 3 cut(s) | 130, 181, 292 |
| BstKTI | GATC | 2 cut(s) | 175, 286 |
| BstMBI | GATC | 2 cut(s) | 172, 283 |
| BstMCI | CGRYCG | 1 cut(s) | 332 |
| BstNI | CCWGG | 2 cut(s) | 886, 1727 |
| BstSCI | CCNGG | 4 cut(s) | 331, 884, 1583, 1725 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1676 |
| BstZI | CGGCCG | 1 cut(s) | 329 |
| BtgI | CCRYGG | 1 cut(s) | 1669 |
| BtsCI | GGATG | 6 cut(s) | 646, 723, 727, 825, 1582, 1639 |
| BtsI | GCAGTG | 1 cut(s) | 1721 |
| BtsIMutI | CAGTG | 2 cut(s) | 1614, 1721 |
| Cac8I | GCNNGC | 3 cut(s) | 18, 126, 273 |
| CfoI | GCGC | 3 cut(s) | 130, 181, 292 |
| Cfr10I | RCCGGY | 1 cut(s) | 16 |
| Cfr13I | GGNCC | 6 cut(s) | 1040, 1124, 1208, 1292, 1376, 1460 |
| Csp6I | GTAC | 2 cut(s) | 55, 247 |
| CviAII | CATG | 8 cut(s) | 1007, 1091, 1175, 1259, 1343, 1427, 1511, 1670 |
| CviQI | GTAC | 2 cut(s) | 55, 247 |
| DdeI | CTNAG | 9 cut(s) | 251, 956, 966, 1034, 1202, 1286, 1370, 1454, 1617 |
| DpnI | GATC | 2 cut(s) | 174, 285 |
| DpnII | GATC | 2 cut(s) | 172, 283 |
| EaeI | YGGCCR | 1 cut(s) | 329 |
| EagI | CGGCCG | 1 cut(s) | 329 |
| Eam1104I | CTCTTC | 5 cut(s) | 300, 347, 377, 535, 783 |
| EarI | CTCTTC | 5 cut(s) | 300, 347, 377, 535, 783 |
| EciI | GGCGGA | 5 cut(s) | 290, 766, 868, 1132, 1154 |
| EclXI | CGGCCG | 1 cut(s) | 329 |
| Eco130I | CCWWGG | 2 cut(s) | 783, 1669 |
| Eco31I | GGTCTC | 1 cut(s) | 1574 |
| Eco52I | CGGCCG | 1 cut(s) | 329 |
| Eco57I | CTGAAG | 2 cut(s) | 65, 1542 |
| EcoRII | CCWGG | 2 cut(s) | 884, 1725 |
| EcoT14I | CCWWGG | 2 cut(s) | 783, 1669 |
| ErhI | CCWWGG | 2 cut(s) | 783, 1669 |
| FaeI | CATG | 8 cut(s) | 1010, 1094, 1178, 1262, 1346, 1430, 1514, 1673 |
| FaiI | YATR | 9 cut(s) | 1008, 1092, 1176, 1260, 1344, 1428, 1512, 1598, 1671 |
| FaqI | GGGAC | 3 cut(s) | 722, 824, 926 |
| FatI | CATG | 8 cut(s) | 1006, 1090, 1174, 1258, 1342, 1426, 1510, 1669 |
| FauI | CCCGC | 1 cut(s) | 66 |
| Fnu4HI | GCNGC | 1 cut(s) | 365 |
| FokI | GGATG | 6 cut(s) | 653, 730, 734, 832, 1589, 1646 |
| Fsp4HI | GCNGC | 1 cut(s) | 365 |
| FspBI | CTAG | 1 cut(s) | 603 |
| GlaI | GCGC | 3 cut(s) | 129, 180, 291 |
| GluI | GCNGC | 1 cut(s) | 365 |
| GsuI | CTGGAG | 2 cut(s) | 23, 215 |
| HapII | CCGG | 4 cut(s) | 17, 332, 368, 1584 |
| HhaI | GCGC | 3 cut(s) | 130, 181, 292 |
| Hin1II | CATG | 8 cut(s) | 1010, 1094, 1178, 1262, 1346, 1430, 1514, 1673 |
| Hin6I | GCGC | 3 cut(s) | 128, 179, 290 |
| HinP1I | GCGC | 3 cut(s) | 128, 179, 290 |
| HinfI | GANTC | 1 cut(s) | 1601 |
| HpaII | CCGG | 4 cut(s) | 17, 332, 368, 1584 |
| Hpy188I | TCNGA | 3 cut(s) | 518, 1663, 1756 |
| Hpy188III | TCNNGA | 1 cut(s) | 485 |
| HpyCH4III | ACNGT | 2 cut(s) | 411, 1641 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 219 |
| HpyF3I | CTNAG | 9 cut(s) | 251, 956, 966, 1034, 1202, 1286, 1370, 1454, 1617 |
| HpySE526I | ACGT | 2 cut(s) | 27, 219 |
| Hsp92II | CATG | 8 cut(s) | 1010, 1094, 1178, 1262, 1346, 1430, 1514, 1673 |
| HspAI | GCGC | 3 cut(s) | 128, 179, 290 |
| KpnI | GGTACC | 2 cut(s) | 58, 250 |
| KroI | GCCGGC | 1 cut(s) | 16 |
| KroNI | GCCGGC | 1 cut(s) | 18 |
| Kzo9I | GATC | 2 cut(s) | 172, 283 |
| LguI | GCTCTTC | 2 cut(s) | 347, 535 |
| MaeI | CTAG | 1 cut(s) | 603 |
| MaeII | ACGT | 2 cut(s) | 27, 219 |
| MaeIII | GTNAC | 3 cut(s) | 28, 220, 1691 |
| MalI | GATC | 2 cut(s) | 174, 285 |
| MbiI | CCGCTC | 3 cut(s) | 52, 73, 244 |
| MboI | GATC | 2 cut(s) | 172, 283 |
| MluCI | AATT | 2 cut(s) | 314, 607 |
| MlyI | GAGTC | 1 cut(s) | 1595 |
| MroNI | GCCGGC | 1 cut(s) | 16 |
| MseI | TTAA | 1 cut(s) | 713 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1674 |
| MspA1I | CMGCKG | 1 cut(s) | 43 |
| MspCI | CTTAAG | 1 cut(s) | 712 |
| MspI | CCGG | 4 cut(s) | 17, 332, 368, 1584 |
| MspR9I | CCNGG | 4 cut(s) | 333, 886, 1585, 1727 |
| MvaI | CCWGG | 2 cut(s) | 886, 1727 |
| NaeI | GCCGGC | 1 cut(s) | 18 |
| NciI | CCSGG | 2 cut(s) | 333, 1585 |
| NcoI | CCATGG | 1 cut(s) | 1669 |
| NdeII | GATC | 2 cut(s) | 172, 283 |
| NgoMIV | GCCGGC | 1 cut(s) | 16 |
| NlaIII | CATG | 8 cut(s) | 1010, 1094, 1178, 1262, 1346, 1430, 1514, 1673 |
| NmuCI | GTSAC | 2 cut(s) | 28, 220 |
| PciSI | GCTCTTC | 2 cut(s) | 347, 535 |
| PdiI | GCCGGC | 1 cut(s) | 18 |
| PkrI | GCNGC | 1 cut(s) | 366 |
| PleI | GAGTC | 1 cut(s) | 1595 |
| PpsI | GAGTC | 1 cut(s) | 1595 |
| Psp6I | CCWGG | 2 cut(s) | 884, 1725 |
| PspGI | CCWGG | 2 cut(s) | 884, 1725 |
| PspPI | GGNCC | 6 cut(s) | 1040, 1124, 1208, 1292, 1376, 1460 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 2 cut(s) | 56, 248 |
| RsaNI | GTAC | 2 cut(s) | 55, 247 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1674 |
| SapI | GCTCTTC | 2 cut(s) | 347, 535 |
| SaqAI | TTAA | 1 cut(s) | 713 |
| SatI | GCNGC | 1 cut(s) | 365 |
| Sau3AI | GATC | 2 cut(s) | 172, 283 |
| Sau96I | GGNCC | 6 cut(s) | 1040, 1124, 1208, 1292, 1376, 1460 |
| SchI | GAGTC | 1 cut(s) | 1595 |
| ScrFI | CCNGG | 4 cut(s) | 333, 886, 1585, 1727 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1674 |
| SmlI | CTYRAG | 1 cut(s) | 712 |
| SmoI | CTYRAG | 1 cut(s) | 712 |
| Sse9I | AATT | 2 cut(s) | 314, 607 |
| SspI | AATATT | 1 cut(s) | 424 |
| SspMI | CTAG | 1 cut(s) | 603 |
| StyD4I | CCNGG | 4 cut(s) | 331, 884, 1583, 1725 |
| StyI | CCWWGG | 2 cut(s) | 783, 1669 |
| TaaI | ACNGT | 2 cut(s) | 411, 1641 |
| TaiI | ACGT | 2 cut(s) | 30, 222 |
| TaqI | TCGA | 9 cut(s) | 175, 286, 920, 1085, 1169, 1253, 1337, 1421, 1505 |
| TasI | AATT | 2 cut(s) | 314, 607 |
| TauI | GCSGC | 1 cut(s) | 367 |
| Tru1I | TTAA | 1 cut(s) | 713 |
| Tru9I | TTAA | 1 cut(s) | 713 |
| TscAI | CASTG | 2 cut(s) | 1614, 1721 |
| TseFI | GTSAC | 2 cut(s) | 28, 220 |
| Tsp45I | GTSAC | 2 cut(s) | 28, 220 |
| TspDTI | ATGAA | 3 cut(s) | 836, 938, 1650 |
| TspGWI | ACGGA | 1 cut(s) | 121 |
| TspRI | CASTG | 2 cut(s) | 1614, 1721 |
| Vha464I | CTTAAG | 1 cut(s) | 712 |
| XapI | RAATTY | 1 cut(s) | 607 |
| XspI | CTAG | 1 cut(s) | 603 |