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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32920 |
| malus_domestica | MD15G1067700.v1.1 |
| prunus_persica | Prupe.1G421600_v2.0.a1 |
| pyrus_communis | pycom08g06650 pycom15g06420 |
| rosa_chinensis | RchiOBHm_Chr6g0309801 |
| rosa_laevigata | RLG00000010535 |
| rosa_multiflora | Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159170 |
| rosa_rugosa | Rorug06G0374700 Rorug06G0374800 Rorug06G0374900 |
| rosa_samantha | Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700 |
| rosa_wichuraiana | Rw6G042520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 54 |
| AccB1I | GGYRCC | 2 cut(s) | 54, 1010 |
| AccBSI | CCGCTC | 2 cut(s) | 52, 250 |
| AciI | CCGC | 9 cut(s) | 52, 170, 250, 281, 325, 497, 880, 982, 1556 |
| AclWI | GGATC | 3 cut(s) | 186, 297, 1903 |
| AcoI | YGGCCR | 3 cut(s) | 386, 410, 434 |
| AcsI | RAATTY | 2 cut(s) | 736, 1876 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AcyI | GRCGYC | 1 cut(s) | 339 |
| AfaI | GTAC | 1 cut(s) | 56 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 46, 244, 1780, 1918 |
| AflII | CTTAAG | 1 cut(s) | 841 |
| AgsI | TTSAA | 4 cut(s) | 614, 722, 1826, 1854 |
| AjnI | CCWGG | 2 cut(s) | 1013, 1773 |
| AluBI | AGCT | 6 cut(s) | 43, 241, 674, 731, 1830, 1862 |
| AluI | AGCT | 6 cut(s) | 43, 241, 674, 731, 1830, 1862 |
| AlwI | GGATC | 3 cut(s) | 186, 297, 1903 |
| ApoI | RAATTY | 2 cut(s) | 736, 1876 |
| Asp718I | GGTACC | 1 cut(s) | 54 |
| AspLEI | GCGC | 4 cut(s) | 130, 187, 298, 1898 |
| AspS9I | GGNCC | 5 cut(s) | 989, 1175, 1427, 1511, 1535 |
| AsuII | TTCGAA | 1 cut(s) | 1868 |
| AvaII | GGWCC | 1 cut(s) | 1535 |
| BanI | GGYRCC | 2 cut(s) | 54, 1010 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbvCI | CCTCAGC | 5 cut(s) | 1085, 1169, 1253, 1337, 1421 |
| BccI | CCATC | 4 cut(s) | 841, 845, 1073, 1799 |
| BceAI | ACGGC | 1 cut(s) | 352 |
| BciT130I | CCWGG | 2 cut(s) | 1015, 1775 |
| BfaI | CTAG | 3 cut(s) | 732, 1857, 1899 |
| BfoI | RGCGCY | 1 cut(s) | 1899 |
| BfrI | CTTAAG | 1 cut(s) | 841 |
| BisI | GCNGC | 1 cut(s) | 497 |
| BlsI | GCNGC | 1 cut(s) | 498 |
| Bme1390I | CCNGG | 2 cut(s) | 1015, 1775 |
| Bme18I | GGWCC | 1 cut(s) | 1535 |
| BmgT120I | GGNCC | 5 cut(s) | 989, 1175, 1427, 1511, 1535 |
| BmiI | GGNNCC | 8 cut(s) | 6, 56, 254, 910, 990, 1012, 1176, 1428 |
| BmrFI | CCNGG | 2 cut(s) | 1015, 1775 |
| BmrI | ACTGGG | 2 cut(s) | 1644, 1746 |
| BmuI | ACTGGG | 2 cut(s) | 1644, 1746 |
| BpmI | CTGGAG | 3 cut(s) | 23, 221, 1839 |
| Bpu10I | CCTNAGC | 5 cut(s) | 1085, 1169, 1253, 1337, 1421 |
| Bpu14I | TTCGAA | 1 cut(s) | 1868 |
| BpuEI | CTTGAG | 1 cut(s) | 227 |
| BsaHI | GRCGYC | 1 cut(s) | 339 |
| BsaJI | CCNNGG | 3 cut(s) | 912, 1014, 1720 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1352, 1382, 1690, 1720 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 46, 244, 1780, 1918 |
| Bse118I | RCCGGY | 4 cut(s) | 16, 388, 412, 436 |
| Bse1I | ACTGG | 3 cut(s) | 1567, 1639, 1741 |
| Bse3DI | GCAATG | 1 cut(s) | 1816 |
| BseBI | CCWGG | 2 cut(s) | 1015, 1775 |
| BseDI | CCNNGG | 3 cut(s) | 912, 1014, 1720 |
| BseGI | GGATG | 6 cut(s) | 775, 852, 856, 954, 1633, 1690 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 46, 244, 1780, 1918 |
| BseMI | GCAATG | 1 cut(s) | 1816 |
| BseMII | CTCAG | 6 cut(s) | 1076, 1160, 1244, 1328, 1412, 1659 |
| BseNI | ACTGG | 3 cut(s) | 1567, 1639, 1741 |
| BseX3I | CGGCCG | 3 cut(s) | 386, 410, 434 |
| Bsh1285I | CGRYCG | 3 cut(s) | 389, 413, 437 |
| BshNI | GGYRCC | 2 cut(s) | 54, 1010 |
| BsiEI | CGRYCG | 3 cut(s) | 389, 413, 437 |
| BsiSI | CCGG | 5 cut(s) | 17, 389, 413, 437, 500 |
| BslFI | GGGAC | 3 cut(s) | 851, 953, 1055 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 46, 244, 1780, 1918 |
| BsmBI | CGTCTC | 1 cut(s) | 953 |
| BsmFI | GGGAC | 3 cut(s) | 851, 953, 1055 |
| BsmI | GAATGC | 2 cut(s) | 1837, 1876 |
| Bsp119I | TTCGAA | 1 cut(s) | 1868 |
| Bsp143I | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| BspACI | CCGC | 9 cut(s) | 52, 170, 250, 281, 325, 497, 880, 982, 1556 |
| BspCNI | CTCAG | 6 cut(s) | 1077, 1161, 1245, 1329, 1413, 1660 |
| BspLI | GGNNCC | 8 cut(s) | 6, 56, 254, 910, 990, 1012, 1176, 1428 |
| BspPI | GGATC | 3 cut(s) | 186, 297, 1903 |
| BspQI | GCTCTTC | 2 cut(s) | 479, 664 |
| BspT104I | TTCGAA | 1 cut(s) | 1868 |
| BspT107I | GGYRCC | 2 cut(s) | 54, 1010 |
| BspTI | CTTAAG | 1 cut(s) | 841 |
| BsrBI | CCGCTC | 2 cut(s) | 52, 250 |
| BsrDI | GCAATG | 1 cut(s) | 1816 |
| BsrFI | RCCGGY | 4 cut(s) | 16, 388, 412, 436 |
| BsrI | ACTGG | 3 cut(s) | 1567, 1639, 1741 |
| BssAI | RCCGGY | 4 cut(s) | 16, 388, 412, 436 |
| BssECI | CCNNGG | 3 cut(s) | 912, 1014, 1720 |
| BssMI | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| BssNI | GRCGYC | 1 cut(s) | 339 |
| BssT1I | CCWWGG | 1 cut(s) | 912 |
| Bst2UI | CCWGG | 2 cut(s) | 1015, 1775 |
| Bst4CI | ACNGT | 2 cut(s) | 540, 1767 |
| Bst6I | CTCTTC | 4 cut(s) | 306, 479, 664, 912 |
| BstACI | GRCGYC | 1 cut(s) | 339 |
| BstAFI | CTTAAG | 1 cut(s) | 841 |
| BstBI | TTCGAA | 1 cut(s) | 1868 |
| BstC8I | GCNNGC | 5 cut(s) | 18, 126, 279, 1271, 1894 |
| BstDEI | CTNAG | 6 cut(s) | 1085, 1169, 1253, 1337, 1421, 1668 |
| BstDSI | CCRYGG | 1 cut(s) | 1720 |
| BstF5I | GGATG | 6 cut(s) | 775, 852, 856, 954, 1633, 1690 |
| BstH2I | RGCGCY | 1 cut(s) | 1899 |
| BstHHI | GCGC | 4 cut(s) | 130, 187, 298, 1898 |
| BstKTI | GATC | 7 cut(s) | 181, 292, 373, 397, 421, 445, 1911 |
| BstMBI | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| BstMCI | CGRYCG | 3 cut(s) | 389, 413, 437 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 13, 49, 247, 988, 1174, 1426, 1510 |
| BstNI | CCWGG | 2 cut(s) | 1015, 1775 |
| BstSCI | CCNGG | 2 cut(s) | 1013, 1773 |
| BstZI | CGGCCG | 3 cut(s) | 386, 410, 434 |
| BtgI | CCRYGG | 1 cut(s) | 1720 |
| BtsCI | GGATG | 6 cut(s) | 775, 852, 856, 954, 1633, 1690 |
| BtsIMutI | CAGTG | 4 cut(s) | 462, 545, 1665, 1880 |
| Cac8I | GCNNGC | 5 cut(s) | 18, 126, 279, 1271, 1894 |
| CfoI | GCGC | 4 cut(s) | 130, 187, 298, 1898 |
| Cfr10I | RCCGGY | 4 cut(s) | 16, 388, 412, 436 |
| Cfr13I | GGNCC | 5 cut(s) | 989, 1175, 1427, 1511, 1535 |
| CseI | GACGC | 1 cut(s) | 328 |
| Csp6I | GTAC | 1 cut(s) | 55 |
| CviAII | CATG | 5 cut(s) | 1142, 1226, 1310, 1394, 1478 |
| CviQI | GTAC | 1 cut(s) | 55 |
| DdeI | CTNAG | 6 cut(s) | 1085, 1169, 1253, 1337, 1421, 1668 |
| DpnI | GATC | 7 cut(s) | 180, 291, 372, 396, 420, 444, 1910 |
| DpnII | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| EaeI | YGGCCR | 3 cut(s) | 386, 410, 434 |
| EagI | CGGCCG | 3 cut(s) | 386, 410, 434 |
| Eam1104I | CTCTTC | 4 cut(s) | 306, 479, 664, 912 |
| EarI | CTCTTC | 4 cut(s) | 306, 479, 664, 912 |
| EciI | GGCGGA | 2 cut(s) | 895, 997 |
| EclXI | CGGCCG | 3 cut(s) | 386, 410, 434 |
| Eco130I | CCWWGG | 1 cut(s) | 912 |
| Eco47I | GGWCC | 1 cut(s) | 1535 |
| Eco52I | CGGCCG | 3 cut(s) | 386, 410, 434 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRII | CCWGG | 2 cut(s) | 1013, 1773 |
| EcoT14I | CCWWGG | 1 cut(s) | 912 |
| ErhI | CCWWGG | 1 cut(s) | 912 |
| Esp3I | CGTCTC | 1 cut(s) | 953 |
| FaeI | CATG | 5 cut(s) | 1145, 1229, 1313, 1397, 1481 |
| FaiI | YATR | 6 cut(s) | 1143, 1227, 1311, 1395, 1479, 1649 |
| FaqI | GGGAC | 3 cut(s) | 851, 953, 1055 |
| FatI | CATG | 5 cut(s) | 1141, 1225, 1309, 1393, 1477 |
| Fnu4HI | GCNGC | 1 cut(s) | 497 |
| FokI | GGATG | 6 cut(s) | 782, 859, 863, 961, 1640, 1697 |
| Fsp4HI | GCNGC | 1 cut(s) | 497 |
| FspBI | CTAG | 3 cut(s) | 732, 1857, 1899 |
| GlaI | GCGC | 4 cut(s) | 129, 186, 297, 1897 |
| GluI | GCNGC | 1 cut(s) | 497 |
| GsuI | CTGGAG | 3 cut(s) | 23, 221, 1839 |
| HaeII | RGCGCY | 1 cut(s) | 1899 |
| HapII | CCGG | 5 cut(s) | 17, 389, 413, 437, 500 |
| HgaI | GACGC | 1 cut(s) | 328 |
| HhaI | GCGC | 4 cut(s) | 130, 187, 298, 1898 |
| Hin1I | GRCGYC | 1 cut(s) | 339 |
| Hin1II | CATG | 5 cut(s) | 1145, 1229, 1313, 1397, 1481 |
| Hin6I | GCGC | 4 cut(s) | 128, 185, 296, 1896 |
| HinP1I | GCGC | 4 cut(s) | 128, 185, 296, 1896 |
| HindIII | AAGCTT | 1 cut(s) | 1828 |
| HinfI | GANTC | 3 cut(s) | 382, 1367, 1652 |
| HpaII | CCGG | 5 cut(s) | 17, 389, 413, 437, 500 |
| Hpy166II | GTNNAC | 1 cut(s) | 1535 |
| Hpy188I | TCNGA | 7 cut(s) | 375, 399, 423, 447, 647, 1714, 1804 |
| Hpy188III | TCNNGA | 2 cut(s) | 256, 614 |
| Hpy8I | GTNNAC | 1 cut(s) | 1535 |
| Hpy99I | CGWCG | 1 cut(s) | 344 |
| HpyCH4III | ACNGT | 2 cut(s) | 540, 1767 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 225 |
| HpyCH4V | TGCA | 1 cut(s) | 1874 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 13, 49, 247, 988, 1174, 1426, 1510 |
| HpyF3I | CTNAG | 6 cut(s) | 1085, 1169, 1253, 1337, 1421, 1668 |
| HpySE526I | ACGT | 2 cut(s) | 27, 225 |
| Hsp92I | GRCGYC | 1 cut(s) | 339 |
| Hsp92II | CATG | 5 cut(s) | 1145, 1229, 1313, 1397, 1481 |
| HspAI | GCGC | 4 cut(s) | 128, 185, 296, 1896 |
| KpnI | GGTACC | 1 cut(s) | 58 |
| KroI | GCCGGC | 1 cut(s) | 16 |
| KroNI | GCCGGC | 1 cut(s) | 18 |
| Kzo9I | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| LguI | GCTCTTC | 2 cut(s) | 479, 664 |
| MaeI | CTAG | 3 cut(s) | 732, 1857, 1899 |
| MaeII | ACGT | 2 cut(s) | 27, 225 |
| MaeIII | GTNAC | 4 cut(s) | 28, 226, 1558, 1742 |
| MalI | GATC | 7 cut(s) | 180, 291, 372, 396, 420, 444, 1910 |
| MbiI | CCGCTC | 2 cut(s) | 52, 250 |
| MboI | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| MluCI | AATT | 4 cut(s) | 320, 736, 1550, 1876 |
| MlyI | GAGTC | 2 cut(s) | 1376, 1646 |
| MroNI | GCCGGC | 1 cut(s) | 16 |
| MseI | TTAA | 2 cut(s) | 842, 1785 |
| MspA1I | CMGCKG | 1 cut(s) | 43 |
| MspCI | CTTAAG | 1 cut(s) | 841 |
| MspI | CCGG | 5 cut(s) | 17, 389, 413, 437, 500 |
| MspR9I | CCNGG | 2 cut(s) | 1015, 1775 |
| Mva1269I | GAATGC | 2 cut(s) | 1837, 1876 |
| MvaI | CCWGG | 2 cut(s) | 1015, 1775 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 13, 49, 247, 988, 1174, 1426, 1510 |
| NaeI | GCCGGC | 1 cut(s) | 18 |
| NdeII | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| NgoMIV | GCCGGC | 1 cut(s) | 16 |
| NlaIII | CATG | 5 cut(s) | 1145, 1229, 1313, 1397, 1481 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 56, 254, 910, 990, 1012, 1176, 1428 |
| NmuCI | GTSAC | 3 cut(s) | 28, 226, 1558 |
| NspV | TTCGAA | 1 cut(s) | 1868 |
| PciSI | GCTCTTC | 2 cut(s) | 479, 664 |
| PctI | GAATGC | 2 cut(s) | 1837, 1876 |
| PdiI | GCCGGC | 1 cut(s) | 18 |
| PfeI | GAWTC | 1 cut(s) | 382 |
| PflFI | GACNNNGTC | 1 cut(s) | 338 |
| PkrI | GCNGC | 1 cut(s) | 498 |
| PleI | GAGTC | 2 cut(s) | 1375, 1646 |
| PpsI | GAGTC | 2 cut(s) | 1375, 1646 |
| Psp6I | CCWGG | 2 cut(s) | 1013, 1773 |
| PspGI | CCWGG | 2 cut(s) | 1013, 1773 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 56, 254, 910, 990, 1012, 1176, 1428 |
| PspPI | GGNCC | 5 cut(s) | 989, 1175, 1427, 1511, 1535 |
| PsyI | GACNNNGTC | 1 cut(s) | 338 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 56 |
| RsaNI | GTAC | 1 cut(s) | 55 |
| SapI | GCTCTTC | 2 cut(s) | 479, 664 |
| SaqAI | TTAA | 2 cut(s) | 842, 1785 |
| SatI | GCNGC | 1 cut(s) | 497 |
| Sau3AI | GATC | 7 cut(s) | 178, 289, 370, 394, 418, 442, 1908 |
| Sau96I | GGNCC | 5 cut(s) | 989, 1175, 1427, 1511, 1535 |
| SchI | GAGTC | 2 cut(s) | 1376, 1646 |
| ScrFI | CCNGG | 2 cut(s) | 1015, 1775 |
| SfuI | TTCGAA | 1 cut(s) | 1868 |
| SinI | GGWCC | 1 cut(s) | 1535 |
| SmlI | CTYRAG | 2 cut(s) | 242, 841 |
| SmoI | CTYRAG | 2 cut(s) | 242, 841 |
| Sse9I | AATT | 4 cut(s) | 320, 736, 1550, 1876 |
| SsiI | CCGC | 9 cut(s) | 52, 170, 250, 281, 325, 497, 880, 982, 1556 |
| SspI | AATATT | 1 cut(s) | 553 |
| SspMI | CTAG | 3 cut(s) | 732, 1857, 1899 |
| StyD4I | CCNGG | 2 cut(s) | 1013, 1773 |
| StyI | CCWWGG | 1 cut(s) | 912 |
| TaaI | ACNGT | 2 cut(s) | 540, 1767 |
| TaiI | ACGT | 2 cut(s) | 30, 228 |
| TaqI | TCGA | 8 cut(s) | 181, 292, 1049, 1220, 1304, 1388, 1472, 1868 |
| TasI | AATT | 4 cut(s) | 320, 736, 1550, 1876 |
| TauI | GCSGC | 1 cut(s) | 499 |
| TfiI | GAWTC | 1 cut(s) | 382 |
| Tru1I | TTAA | 2 cut(s) | 842, 1785 |
| Tru9I | TTAA | 2 cut(s) | 842, 1785 |
| TscAI | CASTG | 4 cut(s) | 462, 545, 1665, 1887 |
| TseFI | GTSAC | 3 cut(s) | 28, 226, 1558 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 226, 1558 |
| TspDTI | ATGAA | 3 cut(s) | 965, 1067, 1701 |
| TspGWI | ACGGA | 3 cut(s) | 121, 977, 1709 |
| TspRI | CASTG | 4 cut(s) | 462, 545, 1665, 1887 |
| Tth111I | GACNNNGTC | 1 cut(s) | 338 |
| Vha464I | CTTAAG | 1 cut(s) | 841 |
| VpaK11BI | GGWCC | 1 cut(s) | 1535 |
| XapI | RAATTY | 2 cut(s) | 736, 1876 |
| XspI | CTAG | 3 cut(s) | 732, 1857, 1899 |