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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32920 |
| malus_domestica | MD15G1067700.v1.1 |
| prunus_persica | Prupe.1G421600_v2.0.a1 |
| pyrus_communis | pycom08g06650 pycom15g06420 |
| rosa_chinensis | RchiOBHm_Chr6g0309801 |
| rosa_laevigata | RLG00000010535 |
| rosa_multiflora | Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159170 |
| rosa_rugosa | Rorug06G0374700 Rorug06G0374800 Rorug06G0374900 |
| rosa_samantha | Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700 |
| rosa_wichuraiana | Rw6G042520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 54 |
| AccB1I | GGYRCC | 2 cut(s) | 54, 983 |
| AccBSI | CCGCTC | 2 cut(s) | 52, 220 |
| AclWI | GGATC | 3 cut(s) | 156, 267, 1708 |
| AcoI | YGGCCR | 3 cut(s) | 356, 380, 404 |
| AcsI | RAATTY | 2 cut(s) | 709, 1681 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AcyI | GRCGYC | 2 cut(s) | 309, 962 |
| AfaI | GTAC | 1 cut(s) | 56 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 1723 |
| AflII | CTTAAG | 1 cut(s) | 814 |
| AgsI | TTSAA | 4 cut(s) | 587, 695, 1633, 1659 |
| AjnI | CCWGG | 1 cut(s) | 986 |
| AluBI | AGCT | 5 cut(s) | 43, 211, 647, 704, 1003 |
| AluI | AGCT | 5 cut(s) | 43, 211, 647, 704, 1003 |
| Alw26I | GTCTC | 9 cut(s) | 722, 824, 926, 1028, 1115, 1199, 1283, 1367, 1514 |
| AlwI | GGATC | 3 cut(s) | 156, 267, 1708 |
| ApoI | RAATTY | 2 cut(s) | 709, 1681 |
| Asp718I | GGTACC | 1 cut(s) | 54 |
| AspLEI | GCGC | 3 cut(s) | 157, 268, 1703 |
| AspS9I | GGNCC | 6 cut(s) | 70, 1148, 1232, 1316, 1400, 1424 |
| AsuC2I | CCSGG | 1 cut(s) | 74 |
| AsuII | TTCGAA | 1 cut(s) | 1673 |
| AvaII | GGWCC | 2 cut(s) | 70, 1424 |
| BanI | GGYRCC | 2 cut(s) | 54, 983 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbsI | GAAGAC | 2 cut(s) | 792, 1662 |
| BbvCI | CCTCAGC | 4 cut(s) | 1058, 1142, 1226, 1310 |
| BccI | CCATC | 4 cut(s) | 814, 818, 1046, 1606 |
| BceAI | ACGGC | 2 cut(s) | 322, 527 |
| BciT130I | CCWGG | 1 cut(s) | 988 |
| BcnI | CCSGG | 1 cut(s) | 74 |
| BcoDI | GTCTC | 9 cut(s) | 722, 824, 926, 1028, 1115, 1199, 1283, 1367, 1514 |
| BfaI | CTAG | 3 cut(s) | 705, 1662, 1704 |
| BfoI | RGCGCY | 1 cut(s) | 1704 |
| BfrI | CTTAAG | 1 cut(s) | 814 |
| BisI | GCNGC | 1 cut(s) | 467 |
| BlsI | GCNGC | 1 cut(s) | 468 |
| Bme1390I | CCNGG | 2 cut(s) | 74, 988 |
| Bme18I | GGWCC | 2 cut(s) | 70, 1424 |
| BmgT120I | GGNCC | 6 cut(s) | 70, 1148, 1232, 1316, 1400, 1424 |
| BmiI | GGNNCC | 8 cut(s) | 6, 56, 224, 883, 985, 1149, 1233, 1317 |
| BmrFI | CCNGG | 2 cut(s) | 74, 988 |
| BmrI | ACTGGG | 1 cut(s) | 1533 |
| BmuI | ACTGGG | 1 cut(s) | 1533 |
| BpiI | GAAGAC | 2 cut(s) | 792, 1662 |
| BpmI | CTGGAG | 3 cut(s) | 23, 191, 1646 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1058, 1142, 1226, 1310 |
| Bpu14I | TTCGAA | 1 cut(s) | 1673 |
| BpuMI | CCSGG | 1 cut(s) | 74 |
| BsaHI | GRCGYC | 2 cut(s) | 309, 962 |
| BsaJI | CCNNGG | 2 cut(s) | 885, 987 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1579, 1609 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 1723 |
| Bse118I | RCCGGY | 4 cut(s) | 16, 358, 382, 406 |
| Bse1I | ACTGG | 2 cut(s) | 1456, 1528 |
| Bse3DI | GCAATG | 1 cut(s) | 1623 |
| BseBI | CCWGG | 1 cut(s) | 988 |
| BseDI | CCNNGG | 2 cut(s) | 885, 987 |
| BseGI | GGATG | 6 cut(s) | 748, 825, 829, 927, 1522, 1579 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 1723 |
| BseMI | GCAATG | 1 cut(s) | 1623 |
| BseMII | CTCAG | 6 cut(s) | 1049, 1133, 1217, 1301, 1548, 1629 |
| BseNI | ACTGG | 2 cut(s) | 1456, 1528 |
| BseX3I | CGGCCG | 3 cut(s) | 356, 380, 404 |
| Bsh1285I | CGRYCG | 3 cut(s) | 359, 383, 407 |
| BshNI | GGYRCC | 2 cut(s) | 54, 983 |
| BsiEI | CGRYCG | 3 cut(s) | 359, 383, 407 |
| BsiSI | CCGG | 6 cut(s) | 17, 73, 359, 383, 407, 470 |
| BslFI | GGGAC | 3 cut(s) | 824, 926, 1028 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 1723 |
| BsmAI | GTCTC | 9 cut(s) | 722, 824, 926, 1028, 1115, 1199, 1283, 1367, 1514 |
| BsmBI | CGTCTC | 1 cut(s) | 926 |
| BsmFI | GGGAC | 3 cut(s) | 824, 926, 1028 |
| BsmI | GAATGC | 2 cut(s) | 1642, 1681 |
| Bsp119I | TTCGAA | 1 cut(s) | 1673 |
| Bsp143I | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| BspCNI | CTCAG | 6 cut(s) | 1050, 1134, 1218, 1302, 1549, 1630 |
| BspLI | GGNNCC | 8 cut(s) | 6, 56, 224, 883, 985, 1149, 1233, 1317 |
| BspPI | GGATC | 3 cut(s) | 156, 267, 1708 |
| BspQI | GCTCTTC | 2 cut(s) | 449, 637 |
| BspT104I | TTCGAA | 1 cut(s) | 1673 |
| BspT107I | GGYRCC | 2 cut(s) | 54, 983 |
| BspTI | CTTAAG | 1 cut(s) | 814 |
| BsrBI | CCGCTC | 2 cut(s) | 52, 220 |
| BsrDI | GCAATG | 1 cut(s) | 1623 |
| BsrFI | RCCGGY | 4 cut(s) | 16, 358, 382, 406 |
| BsrI | ACTGG | 2 cut(s) | 1456, 1528 |
| BssAI | RCCGGY | 4 cut(s) | 16, 358, 382, 406 |
| BssECI | CCNNGG | 2 cut(s) | 885, 987 |
| BssMI | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| BssNI | GRCGYC | 2 cut(s) | 309, 962 |
| BssT1I | CCWWGG | 1 cut(s) | 885 |
| Bst2UI | CCWGG | 1 cut(s) | 988 |
| Bst6I | CTCTTC | 4 cut(s) | 276, 449, 637, 885 |
| BstACI | GRCGYC | 2 cut(s) | 309, 962 |
| BstAFI | CTTAAG | 1 cut(s) | 814 |
| BstBI | TTCGAA | 1 cut(s) | 1673 |
| BstC8I | GCNNGC | 3 cut(s) | 18, 249, 1699 |
| BstDEI | CTNAG | 6 cut(s) | 1058, 1142, 1226, 1310, 1557, 1638 |
| BstF5I | GGATG | 6 cut(s) | 748, 825, 829, 927, 1522, 1579 |
| BstH2I | RGCGCY | 1 cut(s) | 1704 |
| BstHHI | GCGC | 3 cut(s) | 157, 268, 1703 |
| BstKTI | GATC | 5 cut(s) | 151, 262, 343, 415, 1716 |
| BstMAI | GTCTC | 9 cut(s) | 722, 824, 926, 1028, 1115, 1199, 1283, 1367, 1514 |
| BstMBI | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| BstMCI | CGRYCG | 3 cut(s) | 359, 383, 407 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 13, 49, 217, 961, 1147, 1231, 1315, 1399 |
| BstNI | CCWGG | 1 cut(s) | 988 |
| BstSCI | CCNGG | 2 cut(s) | 72, 986 |
| BstV2I | GAAGAC | 2 cut(s) | 792, 1662 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1504 |
| BstZI | CGGCCG | 3 cut(s) | 356, 380, 404 |
| BtsCI | GGATG | 6 cut(s) | 748, 825, 829, 927, 1522, 1579 |
| BtsIMutI | CAGTG | 2 cut(s) | 432, 1685 |
| Cac8I | GCNNGC | 3 cut(s) | 18, 249, 1699 |
| CfoI | GCGC | 3 cut(s) | 157, 268, 1703 |
| Cfr10I | RCCGGY | 4 cut(s) | 16, 358, 382, 406 |
| Cfr13I | GGNCC | 6 cut(s) | 70, 1148, 1232, 1316, 1400, 1424 |
| CseI | GACGC | 3 cut(s) | 298, 970, 1656 |
| Csp6I | GTAC | 1 cut(s) | 55 |
| CviAII | CATG | 3 cut(s) | 1115, 1283, 1367 |
| CviQI | GTAC | 1 cut(s) | 55 |
| DdeI | CTNAG | 6 cut(s) | 1058, 1142, 1226, 1310, 1557, 1638 |
| DpnI | GATC | 5 cut(s) | 150, 261, 342, 414, 1715 |
| DpnII | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| EaeI | YGGCCR | 3 cut(s) | 356, 380, 404 |
| EagI | CGGCCG | 3 cut(s) | 356, 380, 404 |
| Eam1104I | CTCTTC | 4 cut(s) | 276, 449, 637, 885 |
| EarI | CTCTTC | 4 cut(s) | 276, 449, 637, 885 |
| EciI | GGCGGA | 2 cut(s) | 529, 868 |
| EclXI | CGGCCG | 3 cut(s) | 356, 380, 404 |
| Eco130I | CCWWGG | 1 cut(s) | 885 |
| Eco47I | GGWCC | 2 cut(s) | 70, 1424 |
| Eco52I | CGGCCG | 3 cut(s) | 356, 380, 404 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRII | CCWGG | 1 cut(s) | 986 |
| EcoT14I | CCWWGG | 1 cut(s) | 885 |
| ErhI | CCWWGG | 1 cut(s) | 885 |
| Esp3I | CGTCTC | 1 cut(s) | 926 |
| FaeI | CATG | 3 cut(s) | 1118, 1286, 1370 |
| FaiI | YATR | 4 cut(s) | 1116, 1284, 1368, 1538 |
| FaqI | GGGAC | 3 cut(s) | 824, 926, 1028 |
| FatI | CATG | 3 cut(s) | 1114, 1282, 1366 |
| Fnu4HI | GCNGC | 1 cut(s) | 467 |
| FokI | GGATG | 6 cut(s) | 755, 832, 836, 934, 1529, 1586 |
| Fsp4HI | GCNGC | 1 cut(s) | 467 |
| FspBI | CTAG | 3 cut(s) | 705, 1662, 1704 |
| GlaI | GCGC | 3 cut(s) | 156, 267, 1702 |
| GluI | GCNGC | 1 cut(s) | 467 |
| GsuI | CTGGAG | 3 cut(s) | 23, 191, 1646 |
| HaeII | RGCGCY | 1 cut(s) | 1704 |
| HapII | CCGG | 6 cut(s) | 17, 73, 359, 383, 407, 470 |
| HgaI | GACGC | 3 cut(s) | 298, 970, 1656 |
| HhaI | GCGC | 3 cut(s) | 157, 268, 1703 |
| Hin1I | GRCGYC | 2 cut(s) | 309, 962 |
| Hin1II | CATG | 3 cut(s) | 1118, 1286, 1370 |
| Hin6I | GCGC | 3 cut(s) | 155, 266, 1701 |
| HinP1I | GCGC | 3 cut(s) | 155, 266, 1701 |
| HinfI | GANTC | 2 cut(s) | 352, 1541 |
| HpaII | CCGG | 6 cut(s) | 17, 73, 359, 383, 407, 470 |
| Hpy166II | GTNNAC | 1 cut(s) | 1424 |
| Hpy188I | TCNGA | 6 cut(s) | 345, 369, 393, 417, 620, 1611 |
| Hpy188III | TCNNGA | 2 cut(s) | 226, 587 |
| Hpy8I | GTNNAC | 1 cut(s) | 1424 |
| Hpy99I | CGWCG | 1 cut(s) | 314 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 195 |
| HpyCH4V | TGCA | 1 cut(s) | 1679 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 13, 49, 217, 961, 1147, 1231, 1315, 1399 |
| HpyF3I | CTNAG | 6 cut(s) | 1058, 1142, 1226, 1310, 1557, 1638 |
| HpySE526I | ACGT | 2 cut(s) | 27, 195 |
| Hsp92I | GRCGYC | 2 cut(s) | 309, 962 |
| Hsp92II | CATG | 3 cut(s) | 1118, 1286, 1370 |
| HspAI | GCGC | 3 cut(s) | 155, 266, 1701 |
| KpnI | GGTACC | 1 cut(s) | 58 |
| KroI | GCCGGC | 1 cut(s) | 16 |
| KroNI | GCCGGC | 1 cut(s) | 18 |
| Kzo9I | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| LguI | GCTCTTC | 2 cut(s) | 449, 637 |
| LmnI | GCTCC | 8 cut(s) | 4, 42, 49, 76, 121, 172, 238, 881 |
| MaeI | CTAG | 3 cut(s) | 705, 1662, 1704 |
| MaeII | ACGT | 2 cut(s) | 27, 195 |
| MaeIII | GTNAC | 3 cut(s) | 28, 196, 1447 |
| MalI | GATC | 5 cut(s) | 150, 261, 342, 414, 1715 |
| MbiI | CCGCTC | 2 cut(s) | 52, 220 |
| MboI | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| MluCI | AATT | 4 cut(s) | 290, 709, 1439, 1681 |
| MlyI | GAGTC | 1 cut(s) | 1535 |
| MroNI | GCCGGC | 1 cut(s) | 16 |
| MseI | TTAA | 3 cut(s) | 363, 387, 815 |
| MspA1I | CMGCKG | 1 cut(s) | 43 |
| MspCI | CTTAAG | 1 cut(s) | 814 |
| MspI | CCGG | 6 cut(s) | 17, 73, 359, 383, 407, 470 |
| MspR9I | CCNGG | 2 cut(s) | 74, 988 |
| Mva1269I | GAATGC | 2 cut(s) | 1642, 1681 |
| MvaI | CCWGG | 1 cut(s) | 988 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 13, 49, 217, 961, 1147, 1231, 1315, 1399 |
| NaeI | GCCGGC | 1 cut(s) | 18 |
| NciI | CCSGG | 1 cut(s) | 74 |
| NdeII | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| NgoMIV | GCCGGC | 1 cut(s) | 16 |
| NlaIII | CATG | 3 cut(s) | 1118, 1286, 1370 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 56, 224, 883, 985, 1149, 1233, 1317 |
| NmuCI | GTSAC | 3 cut(s) | 28, 196, 1447 |
| NspV | TTCGAA | 1 cut(s) | 1673 |
| PciSI | GCTCTTC | 2 cut(s) | 449, 637 |
| PctI | GAATGC | 2 cut(s) | 1642, 1681 |
| PdiI | GCCGGC | 1 cut(s) | 18 |
| PfeI | GAWTC | 1 cut(s) | 352 |
| PflFI | GACNNNGTC | 1 cut(s) | 308 |
| PkrI | GCNGC | 1 cut(s) | 468 |
| PleI | GAGTC | 1 cut(s) | 1535 |
| PpsI | GAGTC | 1 cut(s) | 1535 |
| Psp6I | CCWGG | 1 cut(s) | 986 |
| PspGI | CCWGG | 1 cut(s) | 986 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 56, 224, 883, 985, 1149, 1233, 1317 |
| PspPI | GGNCC | 6 cut(s) | 70, 1148, 1232, 1316, 1400, 1424 |
| PsyI | GACNNNGTC | 1 cut(s) | 308 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 56 |
| RsaNI | GTAC | 1 cut(s) | 55 |
| SapI | GCTCTTC | 2 cut(s) | 449, 637 |
| SaqAI | TTAA | 3 cut(s) | 363, 387, 815 |
| SatI | GCNGC | 1 cut(s) | 467 |
| Sau3AI | GATC | 5 cut(s) | 148, 259, 340, 412, 1713 |
| Sau96I | GGNCC | 6 cut(s) | 70, 1148, 1232, 1316, 1400, 1424 |
| SchI | GAGTC | 1 cut(s) | 1535 |
| ScrFI | CCNGG | 2 cut(s) | 74, 988 |
| SfuI | TTCGAA | 1 cut(s) | 1673 |
| SinI | GGWCC | 2 cut(s) | 70, 1424 |
| SmlI | CTYRAG | 1 cut(s) | 814 |
| SmoI | CTYRAG | 1 cut(s) | 814 |
| Sse9I | AATT | 4 cut(s) | 290, 709, 1439, 1681 |
| SspI | AATATT | 1 cut(s) | 526 |
| SspMI | CTAG | 3 cut(s) | 705, 1662, 1704 |
| StyD4I | CCNGG | 2 cut(s) | 72, 986 |
| StyI | CCWWGG | 1 cut(s) | 885 |
| TaiI | ACGT | 2 cut(s) | 30, 198 |
| TaqI | TCGA | 8 cut(s) | 151, 262, 1022, 1109, 1193, 1277, 1361, 1673 |
| TasI | AATT | 4 cut(s) | 290, 709, 1439, 1681 |
| TauI | GCSGC | 1 cut(s) | 469 |
| TfiI | GAWTC | 1 cut(s) | 352 |
| Tru1I | TTAA | 3 cut(s) | 363, 387, 815 |
| Tru9I | TTAA | 3 cut(s) | 363, 387, 815 |
| TscAI | CASTG | 2 cut(s) | 432, 1692 |
| TseFI | GTSAC | 3 cut(s) | 28, 196, 1447 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 196, 1447 |
| TspDTI | ATGAA | 4 cut(s) | 938, 1040, 1565, 1590 |
| TspGWI | ACGGA | 2 cut(s) | 121, 950 |
| TspRI | CASTG | 2 cut(s) | 432, 1692 |
| Tth111I | GACNNNGTC | 1 cut(s) | 308 |
| Vha464I | CTTAAG | 1 cut(s) | 814 |
| VpaK11BI | GGWCC | 2 cut(s) | 70, 1424 |
| XapI | RAATTY | 2 cut(s) | 709, 1681 |
| XspI | CTAG | 3 cut(s) | 705, 1662, 1704 |