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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32920 |
| malus_domestica | MD15G1067700.v1.1 |
| prunus_persica | Prupe.1G421600_v2.0.a1 |
| pyrus_communis | pycom08g06650 pycom15g06420 |
| rosa_chinensis | RchiOBHm_Chr6g0309801 |
| rosa_laevigata | RLG00000010535 |
| rosa_multiflora | Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159170 |
| rosa_rugosa | Rorug06G0374700 Rorug06G0374800 Rorug06G0374900 |
| rosa_samantha | Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700 |
| rosa_wichuraiana | Rw6G042520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 54, 264 |
| AccB1I | GGYRCC | 3 cut(s) | 54, 264, 1037 |
| AccBSI | CCGCTC | 3 cut(s) | 52, 73, 262 |
| AciI | CCGC | 9 cut(s) | 52, 73, 176, 262, 293, 337, 1009, 1034, 1415 |
| AclWI | GGATC | 2 cut(s) | 309, 1678 |
| AcoI | YGGCCR | 3 cut(s) | 398, 422, 446 |
| AcsI | RAATTY | 2 cut(s) | 763, 1651 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AcyI | GRCGYC | 1 cut(s) | 351 |
| AfaI | GTAC | 2 cut(s) | 56, 266 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 1693 |
| AflII | CTTAAG | 1 cut(s) | 868 |
| AgsI | TTSAA | 6 cut(s) | 571, 641, 749, 1077, 1603, 1629 |
| AjnI | CCWGG | 1 cut(s) | 1040 |
| AluBI | AGCT | 5 cut(s) | 43, 253, 701, 758, 853 |
| AluI | AGCT | 5 cut(s) | 43, 253, 701, 758, 853 |
| Alw26I | GTCTC | 7 cut(s) | 776, 878, 980, 1082, 1253, 1337, 1484 |
| AlwI | GGATC | 2 cut(s) | 309, 1678 |
| ApoI | RAATTY | 2 cut(s) | 763, 1651 |
| Asp718I | GGTACC | 2 cut(s) | 54, 264 |
| AspLEI | GCGC | 4 cut(s) | 136, 193, 310, 1673 |
| AspS9I | GGNCC | 5 cut(s) | 184, 1202, 1286, 1370, 1394 |
| AsuHPI | GGTGA | 9 cut(s) | 373, 613, 791, 893, 995, 1097, 1268, 1352, 1429 |
| AsuII | TTCGAA | 1 cut(s) | 1643 |
| AvaII | GGWCC | 2 cut(s) | 184, 1394 |
| BanI | GGYRCC | 3 cut(s) | 54, 264, 1037 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbsI | GAAGAC | 1 cut(s) | 1632 |
| BbvCI | CCTCAGC | 3 cut(s) | 1112, 1196, 1280 |
| BccI | CCATC | 4 cut(s) | 868, 872, 1100, 1576 |
| BceAI | ACGGC | 1 cut(s) | 364 |
| BciT130I | CCWGG | 1 cut(s) | 1042 |
| BclI | TGATCA | 1 cut(s) | 406 |
| BcoDI | GTCTC | 7 cut(s) | 776, 878, 980, 1082, 1253, 1337, 1484 |
| BfaI | CTAG | 3 cut(s) | 759, 1632, 1674 |
| BfoI | RGCGCY | 1 cut(s) | 1674 |
| BfrI | CTTAAG | 1 cut(s) | 868 |
| Bme1390I | CCNGG | 1 cut(s) | 1042 |
| Bme18I | GGWCC | 2 cut(s) | 184, 1394 |
| BmgT120I | GGNCC | 5 cut(s) | 184, 1202, 1286, 1370, 1394 |
| BmiI | GGNNCC | 7 cut(s) | 6, 56, 266, 937, 1039, 1203, 1287 |
| BmrFI | CCNGG | 1 cut(s) | 1042 |
| BmrI | ACTGGG | 1 cut(s) | 1503 |
| BmuI | ACTGGG | 1 cut(s) | 1503 |
| BpiI | GAAGAC | 1 cut(s) | 1632 |
| BpmI | CTGGAG | 3 cut(s) | 23, 233, 1616 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1112, 1196, 1280 |
| Bpu14I | TTCGAA | 1 cut(s) | 1643 |
| BsaHI | GRCGYC | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 3 cut(s) | 939, 1041, 1460 |
| BsaWI | WCCGGW | 1 cut(s) | 511 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1549, 1579 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 1693 |
| Bse118I | RCCGGY | 4 cut(s) | 16, 400, 424, 448 |
| Bse1I | ACTGG | 2 cut(s) | 1426, 1498 |
| Bse3DI | GCAATG | 1 cut(s) | 1593 |
| BseBI | CCWGG | 1 cut(s) | 1042 |
| BseDI | CCNNGG | 3 cut(s) | 939, 1041, 1460 |
| BseGI | GGATG | 6 cut(s) | 802, 879, 883, 981, 1492, 1549 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 1693 |
| BseMI | GCAATG | 1 cut(s) | 1593 |
| BseMII | CTCAG | 5 cut(s) | 1103, 1187, 1271, 1518, 1599 |
| BseNI | ACTGG | 2 cut(s) | 1426, 1498 |
| BseX3I | CGGCCG | 3 cut(s) | 398, 422, 446 |
| Bsh1285I | CGRYCG | 3 cut(s) | 401, 425, 449 |
| BshNI | GGYRCC | 3 cut(s) | 54, 264, 1037 |
| BsiEI | CGRYCG | 3 cut(s) | 401, 425, 449 |
| BsiSI | CCGG | 5 cut(s) | 17, 401, 425, 449, 512 |
| BslFI | GGGAC | 3 cut(s) | 878, 980, 1082 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 1693 |
| BsmAI | GTCTC | 7 cut(s) | 776, 878, 980, 1082, 1253, 1337, 1484 |
| BsmBI | CGTCTC | 1 cut(s) | 980 |
| BsmFI | GGGAC | 3 cut(s) | 878, 980, 1082 |
| BsmI | GAATGC | 2 cut(s) | 1036, 1651 |
| Bsp119I | TTCGAA | 1 cut(s) | 1643 |
| Bsp143I | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| BspACI | CCGC | 9 cut(s) | 52, 73, 176, 262, 293, 337, 1009, 1034, 1415 |
| BspCNI | CTCAG | 5 cut(s) | 1104, 1188, 1272, 1519, 1600 |
| BspLI | GGNNCC | 7 cut(s) | 6, 56, 266, 937, 1039, 1203, 1287 |
| BspPI | GGATC | 2 cut(s) | 309, 1678 |
| BspQI | GCTCTTC | 2 cut(s) | 491, 691 |
| BspT104I | TTCGAA | 1 cut(s) | 1643 |
| BspT107I | GGYRCC | 3 cut(s) | 54, 264, 1037 |
| BspTI | CTTAAG | 1 cut(s) | 868 |
| BsrBI | CCGCTC | 3 cut(s) | 52, 73, 262 |
| BsrDI | GCAATG | 1 cut(s) | 1593 |
| BsrFI | RCCGGY | 4 cut(s) | 16, 400, 424, 448 |
| BsrI | ACTGG | 2 cut(s) | 1426, 1498 |
| BssAI | RCCGGY | 4 cut(s) | 16, 400, 424, 448 |
| BssECI | CCNNGG | 3 cut(s) | 939, 1041, 1460 |
| BssMI | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| BssNI | GRCGYC | 1 cut(s) | 351 |
| BssT1I | CCWWGG | 1 cut(s) | 939 |
| Bst2UI | CCWGG | 1 cut(s) | 1042 |
| Bst4CI | ACNGT | 2 cut(s) | 567, 1340 |
| Bst6I | CTCTTC | 5 cut(s) | 195, 318, 491, 691, 939 |
| BstACI | GRCGYC | 1 cut(s) | 351 |
| BstAFI | CTTAAG | 1 cut(s) | 868 |
| BstBI | TTCGAA | 1 cut(s) | 1643 |
| BstC8I | GCNNGC | 4 cut(s) | 18, 132, 291, 1669 |
| BstDEI | CTNAG | 5 cut(s) | 1112, 1196, 1280, 1527, 1608 |
| BstF5I | GGATG | 6 cut(s) | 802, 879, 883, 981, 1492, 1549 |
| BstH2I | RGCGCY | 1 cut(s) | 1674 |
| BstHHI | GCGC | 4 cut(s) | 136, 193, 310, 1673 |
| BstKTI | GATC | 6 cut(s) | 304, 385, 409, 433, 457, 1686 |
| BstMAI | GTCTC | 7 cut(s) | 776, 878, 980, 1082, 1253, 1337, 1484 |
| BstMBI | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| BstMCI | CGRYCG | 3 cut(s) | 401, 425, 449 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 13, 49, 259, 1015, 1201, 1285, 1369 |
| BstNI | CCWGG | 1 cut(s) | 1042 |
| BstSCI | CCNGG | 1 cut(s) | 1040 |
| BstV2I | GAAGAC | 1 cut(s) | 1632 |
| BstZI | CGGCCG | 3 cut(s) | 398, 422, 446 |
| BtsCI | GGATG | 6 cut(s) | 802, 879, 883, 981, 1492, 1549 |
| BtsIMutI | CAGTG | 2 cut(s) | 1524, 1655 |
| Cac8I | GCNNGC | 4 cut(s) | 18, 132, 291, 1669 |
| CfoI | GCGC | 4 cut(s) | 136, 193, 310, 1673 |
| Cfr10I | RCCGGY | 4 cut(s) | 16, 400, 424, 448 |
| Cfr13I | GGNCC | 5 cut(s) | 184, 1202, 1286, 1370, 1394 |
| CseI | GACGC | 2 cut(s) | 340, 1626 |
| Csp6I | GTAC | 2 cut(s) | 55, 265 |
| CviAII | CATG | 2 cut(s) | 1169, 1253 |
| CviQI | GTAC | 2 cut(s) | 55, 265 |
| DdeI | CTNAG | 5 cut(s) | 1112, 1196, 1280, 1527, 1608 |
| DpnI | GATC | 6 cut(s) | 303, 384, 408, 432, 456, 1685 |
| DpnII | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| EaeI | YGGCCR | 3 cut(s) | 398, 422, 446 |
| EagI | CGGCCG | 3 cut(s) | 398, 422, 446 |
| Eam1104I | CTCTTC | 5 cut(s) | 195, 318, 491, 691, 939 |
| EarI | CTCTTC | 5 cut(s) | 195, 318, 491, 691, 939 |
| EciI | GGCGGA | 1 cut(s) | 1024 |
| EclXI | CGGCCG | 3 cut(s) | 398, 422, 446 |
| Eco130I | CCWWGG | 1 cut(s) | 939 |
| Eco47I | GGWCC | 2 cut(s) | 184, 1394 |
| Eco52I | CGGCCG | 3 cut(s) | 398, 422, 446 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRII | CCWGG | 1 cut(s) | 1040 |
| EcoT14I | CCWWGG | 1 cut(s) | 939 |
| ErhI | CCWWGG | 1 cut(s) | 939 |
| Esp3I | CGTCTC | 1 cut(s) | 980 |
| FaeI | CATG | 2 cut(s) | 1172, 1256 |
| FaiI | YATR | 3 cut(s) | 1170, 1254, 1508 |
| FaqI | GGGAC | 3 cut(s) | 878, 980, 1082 |
| FatI | CATG | 2 cut(s) | 1168, 1252 |
| FauI | CCCGC | 2 cut(s) | 66, 1027 |
| FbaI | TGATCA | 1 cut(s) | 406 |
| FokI | GGATG | 6 cut(s) | 809, 886, 890, 988, 1499, 1556 |
| FspBI | CTAG | 3 cut(s) | 759, 1632, 1674 |
| GlaI | GCGC | 4 cut(s) | 135, 192, 309, 1672 |
| GsuI | CTGGAG | 3 cut(s) | 23, 233, 1616 |
| HaeII | RGCGCY | 1 cut(s) | 1674 |
| HapII | CCGG | 5 cut(s) | 17, 401, 425, 449, 512 |
| HgaI | GACGC | 2 cut(s) | 340, 1626 |
| HhaI | GCGC | 4 cut(s) | 136, 193, 310, 1673 |
| Hin1I | GRCGYC | 1 cut(s) | 351 |
| Hin1II | CATG | 2 cut(s) | 1172, 1256 |
| Hin6I | GCGC | 4 cut(s) | 134, 191, 308, 1671 |
| HinP1I | GCGC | 4 cut(s) | 134, 191, 308, 1671 |
| HinfI | GANTC | 2 cut(s) | 394, 1511 |
| HpaII | CCGG | 5 cut(s) | 17, 401, 425, 449, 512 |
| HphI | GGTGA | 9 cut(s) | 373, 613, 791, 893, 995, 1097, 1268, 1352, 1429 |
| Hpy166II | GTNNAC | 1 cut(s) | 1394 |
| Hpy188I | TCNGA | 6 cut(s) | 387, 411, 435, 459, 674, 1581 |
| Hpy188III | TCNNGA | 1 cut(s) | 641 |
| Hpy8I | GTNNAC | 1 cut(s) | 1394 |
| Hpy99I | CGWCG | 1 cut(s) | 356 |
| HpyCH4III | ACNGT | 2 cut(s) | 567, 1340 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 237 |
| HpyCH4V | TGCA | 2 cut(s) | 1026, 1649 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 13, 49, 259, 1015, 1201, 1285, 1369 |
| HpyF3I | CTNAG | 5 cut(s) | 1112, 1196, 1280, 1527, 1608 |
| HpySE526I | ACGT | 2 cut(s) | 27, 237 |
| Hsp92I | GRCGYC | 1 cut(s) | 351 |
| Hsp92II | CATG | 2 cut(s) | 1172, 1256 |
| HspAI | GCGC | 4 cut(s) | 134, 191, 308, 1671 |
| KpnI | GGTACC | 2 cut(s) | 58, 268 |
| KroI | GCCGGC | 1 cut(s) | 16 |
| KroNI | GCCGGC | 1 cut(s) | 18 |
| Ksp22I | TGATCA | 1 cut(s) | 406 |
| Kzo9I | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| LguI | GCTCTTC | 2 cut(s) | 491, 691 |
| MaeI | CTAG | 3 cut(s) | 759, 1632, 1674 |
| MaeII | ACGT | 2 cut(s) | 27, 237 |
| MaeIII | GTNAC | 4 cut(s) | 28, 238, 1174, 1417 |
| MalI | GATC | 6 cut(s) | 303, 384, 408, 432, 456, 1685 |
| MbiI | CCGCTC | 3 cut(s) | 52, 73, 262 |
| MboI | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| MluCI | AATT | 5 cut(s) | 332, 763, 1021, 1409, 1651 |
| MlyI | GAGTC | 1 cut(s) | 1505 |
| MroNI | GCCGGC | 1 cut(s) | 16 |
| MseI | TTAA | 1 cut(s) | 869 |
| MspA1I | CMGCKG | 1 cut(s) | 43 |
| MspCI | CTTAAG | 1 cut(s) | 868 |
| MspI | CCGG | 5 cut(s) | 17, 401, 425, 449, 512 |
| MspR9I | CCNGG | 1 cut(s) | 1042 |
| Mva1269I | GAATGC | 2 cut(s) | 1036, 1651 |
| MvaI | CCWGG | 1 cut(s) | 1042 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 13, 49, 259, 1015, 1201, 1285, 1369 |
| NaeI | GCCGGC | 1 cut(s) | 18 |
| NdeII | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| NgoMIV | GCCGGC | 1 cut(s) | 16 |
| NlaIII | CATG | 2 cut(s) | 1172, 1256 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 56, 266, 937, 1039, 1203, 1287 |
| NmeAIII | GCCGAG | 1 cut(s) | 1485 |
| NmuCI | GTSAC | 4 cut(s) | 28, 238, 1174, 1417 |
| NspV | TTCGAA | 1 cut(s) | 1643 |
| PciSI | GCTCTTC | 2 cut(s) | 491, 691 |
| PctI | GAATGC | 2 cut(s) | 1036, 1651 |
| PdiI | GCCGGC | 1 cut(s) | 18 |
| PfeI | GAWTC | 1 cut(s) | 394 |
| PflFI | GACNNNGTC | 1 cut(s) | 350 |
| PleI | GAGTC | 1 cut(s) | 1505 |
| PpsI | GAGTC | 1 cut(s) | 1505 |
| Psp6I | CCWGG | 1 cut(s) | 1040 |
| PspGI | CCWGG | 1 cut(s) | 1040 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 56, 266, 937, 1039, 1203, 1287 |
| PspPI | GGNCC | 5 cut(s) | 184, 1202, 1286, 1370, 1394 |
| PsyI | GACNNNGTC | 1 cut(s) | 350 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 2 cut(s) | 56, 266 |
| RsaNI | GTAC | 2 cut(s) | 55, 265 |
| SapI | GCTCTTC | 2 cut(s) | 491, 691 |
| SaqAI | TTAA | 1 cut(s) | 869 |
| Sau3AI | GATC | 6 cut(s) | 301, 382, 406, 430, 454, 1683 |
| Sau96I | GGNCC | 5 cut(s) | 184, 1202, 1286, 1370, 1394 |
| SchI | GAGTC | 1 cut(s) | 1505 |
| ScrFI | CCNGG | 1 cut(s) | 1042 |
| SfuI | TTCGAA | 1 cut(s) | 1643 |
| SinI | GGWCC | 2 cut(s) | 184, 1394 |
| SmlI | CTYRAG | 1 cut(s) | 868 |
| SmoI | CTYRAG | 1 cut(s) | 868 |
| Sse9I | AATT | 5 cut(s) | 332, 763, 1021, 1409, 1651 |
| SsiI | CCGC | 9 cut(s) | 52, 73, 176, 262, 293, 337, 1009, 1034, 1415 |
| SspI | AATATT | 1 cut(s) | 580 |
| SspMI | CTAG | 3 cut(s) | 759, 1632, 1674 |
| StyD4I | CCNGG | 1 cut(s) | 1040 |
| StyI | CCWWGG | 1 cut(s) | 939 |
| TaaI | ACNGT | 2 cut(s) | 567, 1340 |
| TaiI | ACGT | 2 cut(s) | 30, 240 |
| TaqI | TCGA | 4 cut(s) | 304, 1247, 1331, 1643 |
| TaqII | GACCGA | 1 cut(s) | 201 |
| TasI | AATT | 5 cut(s) | 332, 763, 1021, 1409, 1651 |
| TfiI | GAWTC | 1 cut(s) | 394 |
| Tru1I | TTAA | 1 cut(s) | 869 |
| Tru9I | TTAA | 1 cut(s) | 869 |
| TscAI | CASTG | 2 cut(s) | 1524, 1662 |
| TseFI | GTSAC | 4 cut(s) | 28, 238, 1174, 1417 |
| Tsp45I | GTSAC | 4 cut(s) | 28, 238, 1174, 1417 |
| TspDTI | ATGAA | 3 cut(s) | 992, 1094, 1560 |
| TspGWI | ACGGA | 2 cut(s) | 121, 1004 |
| TspRI | CASTG | 2 cut(s) | 1524, 1662 |
| Tth111I | GACNNNGTC | 1 cut(s) | 350 |
| Vha464I | CTTAAG | 1 cut(s) | 868 |
| VpaK11BI | GGWCC | 2 cut(s) | 184, 1394 |
| XapI | RAATTY | 2 cut(s) | 763, 1651 |
| XspI | CTAG | 3 cut(s) | 759, 1632, 1674 |