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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32920 |
| malus_domestica | MD15G1067700.v1.1 |
| prunus_persica | Prupe.1G421600_v2.0.a1 |
| pyrus_communis | pycom08g06650 pycom15g06420 |
| rosa_chinensis | RchiOBHm_Chr6g0309801 |
| rosa_laevigata | RLG00000010535 |
| rosa_multiflora | Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159170 |
| rosa_rugosa | Rorug06G0374700 Rorug06G0374800 Rorug06G0374900 |
| rosa_samantha | Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700 |
| rosa_wichuraiana | Rw6G042520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 54, 213 |
| AccB1I | GGYRCC | 2 cut(s) | 54, 213 |
| AccBSI | CCGCTC | 3 cut(s) | 52, 73, 211 |
| AciI | CCGC | 9 cut(s) | 52, 73, 146, 211, 242, 286, 358, 697, 799 |
| AclWI | GGATC | 2 cut(s) | 31, 258 |
| AcoI | YGGCCR | 1 cut(s) | 296 |
| AcsI | RAATTY | 1 cut(s) | 553 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AfaI | GTAC | 2 cut(s) | 56, 215 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 1681 |
| AflII | CTTAAG | 1 cut(s) | 658 |
| AgsI | TTSAA | 4 cut(s) | 431, 539, 1204, 1727 |
| AjnI | CCWGG | 2 cut(s) | 1042, 1674 |
| AluBI | AGCT | 4 cut(s) | 43, 202, 491, 548 |
| AluI | AGCT | 4 cut(s) | 43, 202, 491, 548 |
| AlwI | GGATC | 2 cut(s) | 31, 258 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1460 |
| AoxI | GGCC | 7 cut(s) | 296, 602, 806, 1076, 1409, 1496, 1598 |
| ApoI | RAATTY | 1 cut(s) | 553 |
| Asp718I | GGTACC | 2 cut(s) | 54, 213 |
| AspLEI | GCGC | 1 cut(s) | 259 |
| AspS9I | GGNCC | 3 cut(s) | 1076, 1409, 1433 |
| AvaII | GGWCC | 1 cut(s) | 1433 |
| BanI | GGYRCC | 2 cut(s) | 54, 213 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbvCI | CCTCAGC | 5 cut(s) | 902, 986, 1154, 1235, 1319 |
| BccI | CCATC | 5 cut(s) | 658, 662, 772, 890, 1700 |
| BceAI | ACGGC | 1 cut(s) | 371 |
| BciT130I | CCWGG | 2 cut(s) | 1044, 1676 |
| BfaI | CTAG | 2 cut(s) | 413, 549 |
| BfrI | CTTAAG | 1 cut(s) | 658 |
| Bme1390I | CCNGG | 2 cut(s) | 1044, 1676 |
| Bme18I | GGWCC | 1 cut(s) | 1433 |
| BmgT120I | GGNCC | 3 cut(s) | 1076, 1409, 1433 |
| BmiI | GGNNCC | 5 cut(s) | 6, 56, 215, 727, 1077 |
| BmrFI | CCNGG | 2 cut(s) | 1044, 1676 |
| BmrI | ACTGGG | 2 cut(s) | 1542, 1644 |
| BmuI | ACTGGG | 2 cut(s) | 1542, 1644 |
| BpmI | CTGGAG | 1 cut(s) | 182 |
| Bpu10I | CCTNAGC | 5 cut(s) | 902, 986, 1154, 1235, 1319 |
| BsaJI | CCNNGG | 2 cut(s) | 729, 1618 |
| BsaWI | WCCGGW | 1 cut(s) | 319 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1588, 1618 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 1681 |
| Bse118I | RCCGGY | 1 cut(s) | 16 |
| Bse1I | ACTGG | 3 cut(s) | 1465, 1537, 1639 |
| Bse3DI | GCAATG | 1 cut(s) | 1717 |
| BseBI | CCWGG | 2 cut(s) | 1044, 1676 |
| BseDI | CCNNGG | 2 cut(s) | 729, 1618 |
| BseGI | GGATG | 6 cut(s) | 592, 669, 673, 771, 1531, 1588 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 1681 |
| BseMI | GCAATG | 1 cut(s) | 1717 |
| BseMII | CTCAG | 6 cut(s) | 893, 977, 1145, 1226, 1310, 1557 |
| BseNI | ACTGG | 3 cut(s) | 1465, 1537, 1639 |
| BseX3I | CGGCCG | 1 cut(s) | 296 |
| BseYI | CCCAGC | 1 cut(s) | 1069 |
| Bsh1285I | CGRYCG | 1 cut(s) | 299 |
| BshFI | GGCC | 7 cut(s) | 298, 604, 808, 1078, 1411, 1498, 1600 |
| BshNI | GGYRCC | 2 cut(s) | 54, 213 |
| BsiEI | CGRYCG | 1 cut(s) | 299 |
| BsiSI | CCGG | 2 cut(s) | 17, 320 |
| BslFI | GGGAC | 3 cut(s) | 668, 770, 872 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 1681 |
| BsmFI | GGGAC | 3 cut(s) | 668, 770, 872 |
| BsnI | GGCC | 7 cut(s) | 298, 604, 808, 1078, 1411, 1498, 1600 |
| Bsp143I | GATC | 2 cut(s) | 36, 250 |
| BspACI | CCGC | 9 cut(s) | 52, 73, 146, 211, 242, 286, 358, 697, 799 |
| BspANI | GGCC | 7 cut(s) | 298, 604, 808, 1078, 1411, 1498, 1600 |
| BspCNI | CTCAG | 6 cut(s) | 894, 978, 1146, 1227, 1311, 1558 |
| BspLI | GGNNCC | 5 cut(s) | 6, 56, 215, 727, 1077 |
| BspPI | GGATC | 2 cut(s) | 31, 258 |
| BspQI | GCTCTTC | 1 cut(s) | 481 |
| BspT107I | GGYRCC | 2 cut(s) | 54, 213 |
| BspTI | CTTAAG | 1 cut(s) | 658 |
| BsrBI | CCGCTC | 3 cut(s) | 52, 73, 211 |
| BsrDI | GCAATG | 1 cut(s) | 1717 |
| BsrFI | RCCGGY | 1 cut(s) | 16 |
| BsrI | ACTGG | 3 cut(s) | 1465, 1537, 1639 |
| BssAI | RCCGGY | 1 cut(s) | 16 |
| BssECI | CCNNGG | 2 cut(s) | 729, 1618 |
| BssMI | GATC | 2 cut(s) | 36, 250 |
| BssT1I | CCWWGG | 1 cut(s) | 729 |
| Bst2UI | CCWGG | 2 cut(s) | 1044, 1676 |
| Bst4CI | ACNGT | 3 cut(s) | 1590, 1619, 1665 |
| Bst6I | CTCTTC | 4 cut(s) | 267, 326, 481, 729 |
| BstAFI | CTTAAG | 1 cut(s) | 658 |
| BstC8I | GCNNGC | 2 cut(s) | 18, 240 |
| BstDEI | CTNAG | 6 cut(s) | 902, 986, 1154, 1235, 1319, 1566 |
| BstDSI | CCRYGG | 1 cut(s) | 1618 |
| BstF5I | GGATG | 6 cut(s) | 592, 669, 673, 771, 1531, 1588 |
| BstHHI | GCGC | 1 cut(s) | 259 |
| BstKTI | GATC | 2 cut(s) | 39, 253 |
| BstMBI | GATC | 2 cut(s) | 36, 250 |
| BstMCI | CGRYCG | 1 cut(s) | 299 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 13, 49, 208, 805, 931, 1075, 1408, 1676 |
| BstNI | CCWGG | 2 cut(s) | 1044, 1676 |
| BstSCI | CCNGG | 2 cut(s) | 1042, 1674 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 816 |
| BstZI | CGGCCG | 1 cut(s) | 296 |
| BsuRI | GGCC | 7 cut(s) | 298, 604, 808, 1078, 1411, 1498, 1600 |
| BtgI | CCRYGG | 1 cut(s) | 1618 |
| BtsCI | GGATG | 6 cut(s) | 592, 669, 673, 771, 1531, 1588 |
| BtsI | GCAGTG | 1 cut(s) | 1461 |
| BtsIMutI | CAGTG | 3 cut(s) | 1461, 1563, 1670 |
| Cac8I | GCNNGC | 2 cut(s) | 18, 240 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1460 |
| CfoI | GCGC | 1 cut(s) | 259 |
| Cfr10I | RCCGGY | 1 cut(s) | 16 |
| Cfr13I | GGNCC | 3 cut(s) | 1076, 1409, 1433 |
| Csp6I | GTAC | 2 cut(s) | 55, 214 |
| CviAII | CATG | 5 cut(s) | 959, 1127, 1208, 1292, 1376 |
| CviQI | GTAC | 2 cut(s) | 55, 214 |
| DdeI | CTNAG | 6 cut(s) | 902, 986, 1154, 1235, 1319, 1566 |
| DpnI | GATC | 2 cut(s) | 38, 252 |
| DpnII | GATC | 2 cut(s) | 36, 250 |
| EaeI | YGGCCR | 1 cut(s) | 296 |
| EagI | CGGCCG | 1 cut(s) | 296 |
| Eam1104I | CTCTTC | 4 cut(s) | 267, 326, 481, 729 |
| EarI | CTCTTC | 4 cut(s) | 267, 326, 481, 729 |
| EciI | GGCGGA | 3 cut(s) | 373, 712, 814 |
| EclXI | CGGCCG | 1 cut(s) | 296 |
| Eco130I | CCWWGG | 1 cut(s) | 729 |
| Eco47I | GGWCC | 1 cut(s) | 1433 |
| Eco52I | CGGCCG | 1 cut(s) | 296 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRII | CCWGG | 2 cut(s) | 1042, 1674 |
| EcoT14I | CCWWGG | 1 cut(s) | 729 |
| ErhI | CCWWGG | 1 cut(s) | 729 |
| FaeI | CATG | 5 cut(s) | 962, 1130, 1211, 1295, 1379 |
| FaiI | YATR | 6 cut(s) | 960, 1128, 1209, 1293, 1377, 1547 |
| FaqI | GGGAC | 3 cut(s) | 668, 770, 872 |
| FatI | CATG | 5 cut(s) | 958, 1126, 1207, 1291, 1375 |
| FauI | CCCGC | 1 cut(s) | 66 |
| FokI | GGATG | 6 cut(s) | 599, 676, 680, 778, 1538, 1595 |
| FspBI | CTAG | 2 cut(s) | 413, 549 |
| GlaI | GCGC | 1 cut(s) | 258 |
| GsaI | CCCAGC | 1 cut(s) | 1073 |
| GsuI | CTGGAG | 1 cut(s) | 182 |
| HaeIII | GGCC | 7 cut(s) | 298, 604, 808, 1078, 1411, 1498, 1600 |
| HapII | CCGG | 2 cut(s) | 17, 320 |
| HhaI | GCGC | 1 cut(s) | 259 |
| Hin1II | CATG | 5 cut(s) | 962, 1130, 1211, 1295, 1379 |
| Hin6I | GCGC | 1 cut(s) | 257 |
| HinP1I | GCGC | 1 cut(s) | 257 |
| HinfI | GANTC | 1 cut(s) | 1550 |
| HpaII | CCGG | 2 cut(s) | 17, 320 |
| Hpy166II | GTNNAC | 1 cut(s) | 1433 |
| Hpy188I | TCNGA | 4 cut(s) | 36, 464, 1612, 1705 |
| Hpy188III | TCNNGA | 1 cut(s) | 431 |
| Hpy8I | GTNNAC | 1 cut(s) | 1433 |
| HpyCH4III | ACNGT | 3 cut(s) | 1590, 1619, 1665 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 186 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 13, 49, 208, 805, 931, 1075, 1408, 1676 |
| HpyF3I | CTNAG | 6 cut(s) | 902, 986, 1154, 1235, 1319, 1566 |
| HpySE526I | ACGT | 2 cut(s) | 27, 186 |
| Hsp92II | CATG | 5 cut(s) | 962, 1130, 1211, 1295, 1379 |
| HspAI | GCGC | 1 cut(s) | 257 |
| KpnI | GGTACC | 2 cut(s) | 58, 217 |
| KroI | GCCGGC | 1 cut(s) | 16 |
| KroNI | GCCGGC | 1 cut(s) | 18 |
| Kzo9I | GATC | 2 cut(s) | 36, 250 |
| LguI | GCTCTTC | 1 cut(s) | 481 |
| MaeI | CTAG | 2 cut(s) | 413, 549 |
| MaeII | ACGT | 2 cut(s) | 27, 186 |
| MaeIII | GTNAC | 4 cut(s) | 28, 187, 1456, 1640 |
| MalI | GATC | 2 cut(s) | 38, 252 |
| MbiI | CCGCTC | 3 cut(s) | 52, 73, 211 |
| MboI | GATC | 2 cut(s) | 36, 250 |
| MluCI | AATT | 4 cut(s) | 281, 553, 840, 1448 |
| MlyI | GAGTC | 1 cut(s) | 1544 |
| MroNI | GCCGGC | 1 cut(s) | 16 |
| MseI | TTAA | 1 cut(s) | 659 |
| MspA1I | CMGCKG | 1 cut(s) | 43 |
| MspCI | CTTAAG | 1 cut(s) | 658 |
| MspI | CCGG | 2 cut(s) | 17, 320 |
| MspR9I | CCNGG | 2 cut(s) | 1044, 1676 |
| MvaI | CCWGG | 2 cut(s) | 1044, 1676 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 13, 49, 208, 805, 931, 1075, 1408, 1676 |
| NaeI | GCCGGC | 1 cut(s) | 18 |
| NdeII | GATC | 2 cut(s) | 36, 250 |
| NgoMIV | GCCGGC | 1 cut(s) | 16 |
| NlaIII | CATG | 5 cut(s) | 962, 1130, 1211, 1295, 1379 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 56, 215, 727, 1077 |
| NmeAIII | GCCGAG | 1 cut(s) | 324 |
| NmuCI | GTSAC | 3 cut(s) | 28, 187, 1456 |
| PciSI | GCTCTTC | 1 cut(s) | 481 |
| PdiI | GCCGGC | 1 cut(s) | 18 |
| PleI | GAGTC | 1 cut(s) | 1544 |
| PpsI | GAGTC | 1 cut(s) | 1544 |
| Psp6I | CCWGG | 2 cut(s) | 1042, 1674 |
| PspFI | CCCAGC | 1 cut(s) | 1069 |
| PspGI | CCWGG | 2 cut(s) | 1042, 1674 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 56, 215, 727, 1077 |
| PspPI | GGNCC | 3 cut(s) | 1076, 1409, 1433 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1460 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 2 cut(s) | 56, 215 |
| RsaNI | GTAC | 2 cut(s) | 55, 214 |
| SapI | GCTCTTC | 1 cut(s) | 481 |
| SaqAI | TTAA | 1 cut(s) | 659 |
| Sau3AI | GATC | 2 cut(s) | 36, 250 |
| Sau96I | GGNCC | 3 cut(s) | 1076, 1409, 1433 |
| SchI | GAGTC | 1 cut(s) | 1544 |
| ScrFI | CCNGG | 2 cut(s) | 1044, 1676 |
| SinI | GGWCC | 1 cut(s) | 1433 |
| SmlI | CTYRAG | 1 cut(s) | 658 |
| SmoI | CTYRAG | 1 cut(s) | 658 |
| Sse9I | AATT | 4 cut(s) | 281, 553, 840, 1448 |
| SsiI | CCGC | 9 cut(s) | 52, 73, 146, 211, 242, 286, 358, 697, 799 |
| SspI | AATATT | 1 cut(s) | 370 |
| SspMI | CTAG | 2 cut(s) | 413, 549 |
| StyD4I | CCNGG | 2 cut(s) | 1042, 1674 |
| StyI | CCWWGG | 1 cut(s) | 729 |
| TaaI | ACNGT | 3 cut(s) | 1590, 1619, 1665 |
| TaiI | ACGT | 2 cut(s) | 30, 189 |
| TaqI | TCGA | 6 cut(s) | 253, 866, 1037, 1121, 1286, 1370 |
| TasI | AATT | 4 cut(s) | 281, 553, 840, 1448 |
| Tru1I | TTAA | 1 cut(s) | 659 |
| Tru9I | TTAA | 1 cut(s) | 659 |
| TscAI | CASTG | 3 cut(s) | 1461, 1563, 1670 |
| TseFI | GTSAC | 3 cut(s) | 28, 187, 1456 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 187, 1456 |
| TspDTI | ATGAA | 3 cut(s) | 782, 884, 1599 |
| TspGWI | ACGGA | 1 cut(s) | 121 |
| TspRI | CASTG | 3 cut(s) | 1461, 1563, 1670 |
| Vha464I | CTTAAG | 1 cut(s) | 658 |
| VpaK11BI | GGWCC | 1 cut(s) | 1433 |
| XapI | RAATTY | 1 cut(s) | 553 |
| XspI | CTAG | 2 cut(s) | 413, 549 |