Rorug06G0374700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013623
Physical Location & Seq
Reverse (-)
52090931 .. 52095372
4442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0374700.1

Sequence Viewer

Length: 2022 bp
ATGTGCGCCGTTAATACCTCAATTTTCCACGAGTCGCTGGCCACCTCTCACCACCACCACGTTTTCTGCTCTTGTCATCAAGATGCCGTGGATCGATTGAGCTCCAAATTAAAGAACATTGAAGTGATTGATCACCGCTGGCTCGCGACCCTCGGCGTGGCCTTGGTCTACGTCCTCCACGTCTACTTCTCCAGGGATTCTACATCGTGTCGTACGGCTTGGGGATCTTCCTCCTCAACTTGCTCATCGGCTTTCTCTCTCCTCAGGTCGACCCGGAGATCCACGACCTTTCCGACGGCCCCGGCCTCCCTACCCGCGGATCCGACGAGTTCCGCCCCTTCGTTCGACGGCTCCCCGAGTTTAAATTCTGGGTATGCCAAAATCCGGGTCTTGCTTATTGCTAATTTGGATTCGATATTTTATTTGATTTTTGATTTTTGGGGTATTGTGGAGTATTATTTCAGTGATCTGAACTTAGCTACTACTGATCATCTTATGAGGTTCATAAACAAAGACCCAGAAGGATTTGTGCCAATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCGTAAGTAGTCATTCCCAGCTTGCAACTGTATTGCGGAACTCCTCAAAGCTTGTGAGTTCACTTATTTGTGCTCTGGCTGCATTTGGATTAGCTGCATTACTTGTTATATTTTTGTTGGGTGGATTCGTTATTCCCAAAGATAGCATTAAGCCATGGTGGCAATGGGCCTTTTGGGTATCACCACTATCATATGGACAACGCGCTCTTTCTGTCAATGAATTTACTGCTGTAAGGTGGATCAAGATAGCTCCTTTAACAAACAGAACAATTGGGCAAAATGTCCTCCAAGAACACAACATACCAAATGGTGATTATTGGTATTGGATTGGAGTTGGTGGTTTGTTAGCTTATGCATTGCTTTTCAATTGCAGAGTGACTCTGGCCTTGACGTACCTAAATCCACTAAGGAAGTACCAGACAGTGCTTCCACTTGATGACACAGAAGGGAGTCCTGCTGCAGATGGGGGTAAAAATAAGACTGTGTCTAGCCCAAAATTAGCTAGAGTTAACAGCCCAGTAAAGGGAATGATCTTACCATTTCAGCCATTAACAATGACTTTCCACAATGTTACCTACTCTGTTCACAAGCCAAAGGAGATGAAGTCACAAGGTATACCAGAATCGAAGTTGCAACTCTTGTCGAATGTGAGCGGAGTATTCTCACCAGGTATTCTTACAGCTTTAGTTGGGTCTAGTGGAGCTGGAAAGACCACTTTGATGGACGTCCTTGCTGGTAGGAAAACTGGTGGATACATAGAAGGAGATATTAAGATATCTGGTTACCTGAGAGAGCAACATACTTTTGCTAGAGTAGCAGGATATGTTGAGCAAAATGACATACATTCTCCTCAAGTTACAGTTAAGGAGAGTCTATGGTTTTCTTCTGCTCTTCGCTTTCCAAAGGAAGTCAGCACAGAGACAAGACTCGTGTTTGTTGAAGAAGTAATGGAACTAGTAGAGCTTGATACTCTAAGGCATGCTTTGGTTGGTGTGCCAGGCAGTTCAGGCTTATCAACAGAGCAAAGAAAACGCTTAACAATCGCTGTTGAGCTTGTTGCGAACCCGTCAATTATCTTTATGGATGAACCCACATCTGGACTGGACGCAAGGGCAGCAGCCATTGTGATGAGGACTGTTCGTAATACTGTTGATACAGGAAGAACGGTGGTCTGCACTATACACCAACCAAGTATCGACATTTTTGAGGCATTTGACGAGCTTCTTCTTATGAAACGAGGGGGGCAAGTTATATATGGAGGAAAGCTAGGCCAGCACTCCCAGACAATGATAAACTACTTTCAGGAGATTAATGGAATCACTCCAATTCCAAGCGGGTACAATCCAGAAACCTGGATGCTGGAGGTAACCACACAAACTCTACCCAAATCCCAACCAACCTTTCAGCCTAAGACAAATAGGAGAGACTGCAAGATTGGATACCCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

673

Amino Acids

74.25

Weight (kDa)

8.99

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 150 - 204 8.9e-18 La domain
ABC2_membrane PF01061 217 - 265 5.7e-12 ABC-2 type transporter
PDR_assoc PF08370 270 - 332 4e-22 Plant PDR ABC transporter associated
ABC_tran PF00005 404 - 556 7.5e-21 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013623)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32920
malus_domestica MD15G1067700.v1.1
prunus_persica Prupe.1G421600_v2.0.a1
pyrus_communis pycom08g06650 pycom15g06420
rosa_chinensis RchiOBHm_Chr6g0309801
rosa_laevigata RLG00000010535
rosa_multiflora Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006
rosa_roxburghii Rroxscaffold_7G00159170
rosa_rugosa Rorug06G0374700 Rorug06G0374800 Rorug06G0374900
rosa_samantha Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700
rosa_wichuraiana Rw6G042520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1299
AccBSI CCGCTC 1 cut(s) 1224
AccI GTMKAC 4 cut(s) 168, 183, 269, 1186
AccII CGCG 3 cut(s) 146, 317, 774
AciI CCGC 7 cut(s) 136, 315, 317, 333, 607, 1224, 1905
AclWI GGATC 6 cut(s) 99, 232, 273, 314, 327, 818
AcoI YGGCCR 1 cut(s) 39
AcsI RAATTY 2 cut(s) 364, 791
AcyI GRCGYC 1 cut(s) 1296
AfaI GTAC 4 cut(s) 214, 965, 986, 1910
AfiI CCNNNNNNNGG 6 cut(s) 157, 316, 384, 1093, 1094, 1667
AgsI TTSAA 4 cut(s) 122, 556, 937, 1511
AhlI ACTAGT 1 cut(s) 1525
AjiI CACGTC 1 cut(s) 181
AjnI CCWGG 4 cut(s) 191, 1237, 1567, 1922
AjuI GAANNNNNNNTTGG 2 cut(s) 1956, 1988
Alw21I GWGCWC 2 cut(s) 104, 646
Alw26I GTCTC 2 cut(s) 1484, 1989
AlwI GGATC 6 cut(s) 99, 232, 273, 314, 327, 818
Ama87I CYCGRG 1 cut(s) 355
AoxI GGCC 8 cut(s) 39, 159, 297, 303, 567, 738, 954, 1840
ApeKI GCWGC 5 cut(s) 650, 665, 1028, 1685, 1688
ApoI RAATTY 2 cut(s) 364, 791
ArsI GACNNNNNNTTYG 2 cut(s) 372, 404
AseI ATTAAT 1 cut(s) 1881
AspLEI GCGC 2 cut(s) 8, 776
AspS9I GGNCC 3 cut(s) 298, 568, 738
AsuC2I CCSGG 3 cut(s) 274, 302, 386
AsuHPI GGTGA 5 cut(s) 41, 125, 744, 893, 1227
AvaI CYCGRG 1 cut(s) 355
AxyI CCTNAGG 1 cut(s) 263
BalI TGGCCA 1 cut(s) 41
BamHI GGATCC 1 cut(s) 319
BanII GRGCYC 1 cut(s) 104
BauI CACGAG 2 cut(s) 29, 1499
Bbv12I GWGCWC 2 cut(s) 104, 646
BbvI GCAGC 5 cut(s) 637, 652, 1015, 1697, 1700
BccI CCATC 2 cut(s) 1028, 1285
BceAI ACGGC 4 cut(s) 71, 231, 312, 364
BciT130I CCWGG 4 cut(s) 193, 1239, 1569, 1924
BciVI GTATCC 2 cut(s) 1316, 2003
BclI TGATCA 2 cut(s) 130, 487
BcnI CCSGG 3 cut(s) 274, 302, 386
BcoDI GTCTC 2 cut(s) 1484, 1989
BcuI ACTAGT 1 cut(s) 1525
BfaI CTAG 6 cut(s) 1059, 1074, 1266, 1380, 1526, 1838
BfmI CTRYAG 1 cut(s) 1029
BfuI GTATCC 2 cut(s) 1316, 2003
BglI GCCNNNNNGGC 1 cut(s) 730
BisI GCNGC 5 cut(s) 651, 666, 1029, 1686, 1689
BlsI GCNGC 5 cut(s) 652, 667, 1030, 1687, 1690
Bme1390I CCNGG 7 cut(s) 193, 274, 302, 386, 1239, 1569, 1924
BmeT110I CYCGRG 1 cut(s) 355
BmgBI CACGTC 1 cut(s) 181
BmgT120I GGNCC 3 cut(s) 298, 568, 738
BmiI GGNNCC 3 cut(s) 300, 321, 352
BmrFI CCNGG 7 cut(s) 193, 274, 302, 386, 1239, 1569, 1924
BmrI ACTGGG 1 cut(s) 1082
BmsI GCATC 3 cut(s) 73, 557, 1917
BmuI ACTGGG 1 cut(s) 1082
BpmI CTGGAG 2 cut(s) 175, 1952
BpuEI CTTGAG 1 cut(s) 1407
BpuMI CCSGG 3 cut(s) 274, 302, 386
Bsa29I ATCGAT 1 cut(s) 94
BsaHI GRCGYC 1 cut(s) 1296
BsaJI CCNNGG 8 cut(s) 87, 151, 162, 192, 300, 315, 725, 2015
BsaXI ACNNNNNCTCC 2 cut(s) 1160, 1190
Bsc4I CCNNNNNNNGG 6 cut(s) 157, 316, 384, 1093, 1094, 1667
Bse1I ACTGG 3 cut(s) 1088, 1321, 1677
Bse21I CCTNAGG 1 cut(s) 263
Bse3DI GCAATG 2 cut(s) 740, 926
BseBI CCWGG 4 cut(s) 193, 1239, 1569, 1924
BseCI ATCGAT 1 cut(s) 94
BseDI CCNNGG 8 cut(s) 87, 151, 162, 192, 300, 315, 725, 2015
BseGI GGATG 2 cut(s) 1660, 1932
BseLI CCNNNNNNNGG 6 cut(s) 157, 316, 384, 1093, 1094, 1667
BseMI GCAATG 2 cut(s) 740, 926
BseMII CTCAG 2 cut(s) 277, 1349
BseNI ACTGG 3 cut(s) 1088, 1321, 1677
BseRI GAGGAG 4 cut(s) 223, 251, 604, 1410
BseXI GCAGC 5 cut(s) 637, 652, 1015, 1697, 1700
BseYI CCCAGC 1 cut(s) 588
BsgI GTGCAG 1 cut(s) 1729
Bsh1236I CGCG 3 cut(s) 146, 317, 774
BshFI GGCC 8 cut(s) 41, 161, 299, 305, 569, 740, 956, 1842
BshVI ATCGAT 1 cut(s) 94
BsiHKAI GWGCWC 2 cut(s) 104, 646
BsiHKCI CYCGRG 1 cut(s) 355
BsiSI CCGG 3 cut(s) 274, 302, 385
BsiWI CGTACG 1 cut(s) 212
BslI CCNNNNNNNGG 6 cut(s) 157, 316, 384, 1093, 1094, 1667
BsmAI GTCTC 2 cut(s) 1484, 1989
BsnI GGCC 8 cut(s) 41, 161, 299, 305, 569, 740, 956, 1842
BsoBI CYCGRG 1 cut(s) 355
Bsp1286I GDGCHC 2 cut(s) 104, 646
Bsp143I GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
Bsp19I CCATGG 1 cut(s) 725
Bsp68I TCGCGA 1 cut(s) 146
BspACI CCGC 7 cut(s) 136, 315, 317, 333, 607, 1224, 1905
BspANI GGCC 8 cut(s) 41, 161, 299, 305, 569, 740, 956, 1842
BspCNI CTCAG 2 cut(s) 276, 1350
BspDI ATCGAT 1 cut(s) 94
BspFNI CGCG 3 cut(s) 146, 317, 774
BspLI GGNNCC 3 cut(s) 300, 321, 352
BspMAI CTGCAG 1 cut(s) 1033
BspPI GGATC 6 cut(s) 99, 232, 273, 314, 327, 818
BspQI GCTCTTC 1 cut(s) 1467
BsrBI CCGCTC 1 cut(s) 1224
BsrDI GCAATG 2 cut(s) 740, 926
BsrI ACTGG 3 cut(s) 1088, 1321, 1677
BssECI CCNNGG 8 cut(s) 87, 151, 162, 192, 300, 315, 725, 2015
BssMI GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
BssNAI GTATAC 1 cut(s) 1187
BssNI GRCGYC 1 cut(s) 1296
BssSI CACGAG 2 cut(s) 29, 1499
BssT1I CCWWGG 3 cut(s) 162, 725, 2015
Bst1107I GTATAC 1 cut(s) 1187
Bst2BI CACGAG 2 cut(s) 29, 1499
Bst2UI CCWGG 4 cut(s) 193, 1239, 1569, 1924
Bst4CI ACNGT 7 cut(s) 601, 994, 1054, 1432, 1708, 1720, 1738
Bst6I CTCTTC 1 cut(s) 1467
BstACI GRCGYC 1 cut(s) 1296
BstC8I GCNNGC 6 cut(s) 39, 140, 144, 594, 1551, 1844
BstDEI CTNAG 6 cut(s) 263, 475, 977, 1358, 1544, 1980
BstDSI CCRYGG 3 cut(s) 87, 315, 725
BstEII GGTNACC 2 cut(s) 1352, 1936
BstF5I GGATG 2 cut(s) 1660, 1932
BstFNI CGCG 3 cut(s) 146, 317, 774
BstHHI GCGC 2 cut(s) 8, 776
BstKTI GATC 9 cut(s) 94, 133, 227, 281, 322, 469, 490, 813, 1104
BstMAI GTCTC 2 cut(s) 1484, 1989
BstMBI GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
BstMWI GCNNNNNNNGC 6 cut(s) 650, 730, 1385, 1578, 1685, 1843
BstNI CCWGG 4 cut(s) 193, 1239, 1569, 1924
BstNSI RCATGY 1 cut(s) 1553
BstPI GGTNACC 2 cut(s) 1352, 1936
BstSCI CCNGG 7 cut(s) 191, 272, 300, 384, 1237, 1567, 1922
BstSFI CTRYAG 1 cut(s) 1029
BstUI CGCG 3 cut(s) 146, 317, 774
BstV1I GCAGC 5 cut(s) 637, 652, 1015, 1697, 1700
BstX2I RGATCY 3 cut(s) 224, 278, 319
BstXI CCANNNNNNTGG 2 cut(s) 1291, 1923
BstYI RGATCY 3 cut(s) 224, 278, 319
BstZ17I GTATAC 1 cut(s) 1187
Bsu15I ATCGAT 1 cut(s) 94
Bsu36I CCTNAGG 1 cut(s) 263
BsuI GTATCC 2 cut(s) 1316, 2003
BsuRI GGCC 8 cut(s) 41, 161, 299, 305, 569, 740, 956, 1842
BsuTUI ATCGAT 1 cut(s) 94
BtgI CCRYGG 3 cut(s) 87, 315, 725
BtrI CACGTC 1 cut(s) 181
BtsCI GGATG 2 cut(s) 1660, 1932
BtsIMutI CAGTG 2 cut(s) 469, 999
BtuMI TCGCGA 1 cut(s) 146
Cac8I GCNNGC 6 cut(s) 39, 140, 144, 594, 1551, 1844
CfoI GCGC 2 cut(s) 8, 776
Cfr13I GGNCC 3 cut(s) 298, 568, 738
Cfr42I CCGCGG 1 cut(s) 318
ClaI ATCGAT 1 cut(s) 94
CseI GACGC 1 cut(s) 1685
CsiI ACCWGGT 1 cut(s) 1237
Csp6I GTAC 4 cut(s) 213, 964, 985, 1909
CviAII CATG 2 cut(s) 726, 1550
CviQI GTAC 4 cut(s) 213, 964, 985, 1909
DdeI CTNAG 6 cut(s) 263, 475, 977, 1358, 1544, 1980
DpnI GATC 9 cut(s) 93, 132, 226, 280, 321, 468, 489, 812, 1103
DpnII GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
DraI TTTAAA 1 cut(s) 363
EaeI YGGCCR 1 cut(s) 39
Eam1104I CTCTTC 1 cut(s) 1467
EarI CTCTTC 1 cut(s) 1467
EciI GGCGGA 1 cut(s) 322
Ecl136II GAGCTC 1 cut(s) 102
Eco130I CCWWGG 3 cut(s) 162, 725, 2015
Eco24I GRGCYC 1 cut(s) 104
Eco32I GATATC 1 cut(s) 1347
Eco53kI GAGCTC 1 cut(s) 102
Eco81I CCTNAGG 1 cut(s) 263
Eco88I CYCGRG 1 cut(s) 355
Eco91I GGTNACC 2 cut(s) 1352, 1936
EcoICRI GAGCTC 1 cut(s) 102
EcoO109I RGGNCCY 1 cut(s) 568
EcoO65I GGTNACC 2 cut(s) 1352, 1936
EcoRII CCWGG 4 cut(s) 191, 1237, 1567, 1922
EcoRV GATATC 1 cut(s) 1347
EcoT14I CCWWGG 3 cut(s) 162, 725, 2015
EcoT22I ATGCAT 1 cut(s) 928
EcoT38I GRGCYC 1 cut(s) 104
ErhI CCWWGG 3 cut(s) 162, 725, 2015
FaeI CATG 2 cut(s) 729, 1553
FalI AAGNNNNNCTT 2 cut(s) 1537, 1569
FatI CATG 2 cut(s) 725, 1549
FauI CCCGC 2 cut(s) 322, 1898
FauNDI CATATG 1 cut(s) 763
FbaI TGATCA 2 cut(s) 130, 487
FblI GTMKAC 4 cut(s) 168, 183, 269, 1186
Fnu4HI GCNGC 5 cut(s) 651, 666, 1029, 1686, 1689
FokI GGATG 2 cut(s) 1667, 1939
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 5 cut(s) 651, 666, 1029, 1686, 1689
FspBI CTAG 6 cut(s) 1059, 1074, 1266, 1380, 1526, 1838
GlaI GCGC 2 cut(s) 7, 775
GluI GCNGC 5 cut(s) 651, 666, 1029, 1686, 1689
GsaI CCCAGC 1 cut(s) 592
GsuI CTGGAG 2 cut(s) 175, 1952
HaeIII GGCC 8 cut(s) 41, 161, 299, 305, 569, 740, 956, 1842
HapII CCGG 3 cut(s) 274, 302, 385
HgaI GACGC 1 cut(s) 1685
HhaI GCGC 2 cut(s) 8, 776
Hin1I GRCGYC 1 cut(s) 1296
Hin1II CATG 2 cut(s) 729, 1553
Hin6I GCGC 2 cut(s) 6, 774
HinP1I GCGC 2 cut(s) 6, 774
HincII GTYRAC 2 cut(s) 270, 1081
HindII GTYRAC 2 cut(s) 270, 1081
HindIII AAGCTT 1 cut(s) 620
HpaI GTTAAC 1 cut(s) 1081
HpaII CCGG 3 cut(s) 274, 302, 385
HphI GGTGA 5 cut(s) 41, 125, 744, 893, 1227
Hpy166II GTNNAC 7 cut(s) 169, 184, 270, 632, 1081, 1156, 1187
Hpy188I TCNGA 3 cut(s) 294, 324, 471
Hpy188III TCNNGA 7 cut(s) 80, 145, 556, 814, 1668, 1874, 1916
Hpy8I GTNNAC 7 cut(s) 169, 184, 270, 632, 1081, 1156, 1187
Hpy99I CGWCG 3 cut(s) 298, 328, 350
HpyAV CCTTC 4 cut(s) 348, 515, 1010, 1325
HpyCH4III ACNGT 7 cut(s) 601, 994, 1054, 1432, 1708, 1720, 1738
HpyCH4IV ACGT 5 cut(s) 60, 171, 180, 962, 1296
HpyF10VI GCNNNNNNNGC 6 cut(s) 650, 730, 1385, 1578, 1685, 1843
HpyF3I CTNAG 6 cut(s) 263, 475, 977, 1358, 1544, 1980
HpySE526I ACGT 5 cut(s) 60, 171, 180, 962, 1296
Hsp92I GRCGYC 1 cut(s) 1296
Hsp92II CATG 2 cut(s) 729, 1553
HspAI GCGC 2 cut(s) 6, 774
Ksp22I TGATCA 2 cut(s) 130, 487
KspAI GTTAAC 1 cut(s) 1081
KspI CCGCGG 1 cut(s) 318
Kzo9I GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
LguI GCTCTTC 1 cut(s) 1467
LmnI GCTCC 4 cut(s) 107, 356, 826, 1271
Lsp1109I GCAGC 5 cut(s) 637, 652, 1015, 1697, 1700
LweI GCATC 3 cut(s) 73, 557, 1917
MabI ACCWGGT 1 cut(s) 1237
MaeI CTAG 6 cut(s) 1059, 1074, 1266, 1380, 1526, 1838
MaeII ACGT 5 cut(s) 60, 171, 180, 962, 1296
MaeIII GTNAC 6 cut(s) 946, 1141, 1176, 1352, 1426, 1936
MalI GATC 9 cut(s) 93, 132, 226, 280, 321, 468, 489, 812, 1103
MbiI CCGCTC 1 cut(s) 1224
MboI GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
MboII GAAGA 7 cut(s) 219, 571, 1446, 1454, 1523, 1743, 1787
MfeI CAATTG 2 cut(s) 840, 937
MflI RGATCY 3 cut(s) 224, 278, 319
MhlI GDGCHC 2 cut(s) 104, 646
MlsI TGGCCA 1 cut(s) 41
MluNI TGGCCA 1 cut(s) 41
MlyI GAGTC 5 cut(s) 41, 943, 1030, 1450, 1491
MmeI TCCRAC 2 cut(s) 317, 347
Mox20I TGGCCA 1 cut(s) 41
Mph1103I ATGCAT 1 cut(s) 928
MscI TGGCCA 1 cut(s) 41
MslI CAYNNNNRTG 4 cut(s) 81, 122, 1289, 1697
Msp20I TGGCCA 1 cut(s) 41
MspA1I CMGCKG 2 cut(s) 138, 317
MspI CCGG 3 cut(s) 274, 302, 385
MspR9I CCNGG 7 cut(s) 193, 274, 302, 386, 1239, 1569, 1924
MunI CAATTG 2 cut(s) 840, 937
MvaI CCWGG 4 cut(s) 193, 1239, 1569, 1924
MvnI CGCG 3 cut(s) 146, 317, 774
MwoI GCNNNNNNNGC 6 cut(s) 650, 730, 1385, 1578, 1685, 1843
NciI CCSGG 3 cut(s) 274, 302, 386
NcoI CCATGG 1 cut(s) 725
NdeI CATATG 1 cut(s) 763
NdeII GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
NlaIII CATG 2 cut(s) 729, 1553
NlaIV GGNNCC 3 cut(s) 300, 321, 352
NmeAIII GCCGAG 1 cut(s) 132
NmuCI GTSAC 2 cut(s) 946, 1176
NruI TCGCGA 1 cut(s) 146
NsiI ATGCAT 1 cut(s) 928
NspI RCATGY 1 cut(s) 1553
PaeI GCATGC 1 cut(s) 1553
PciSI GCTCTTC 1 cut(s) 1467
PcsI WCGNNNNNNNCGW 2 cut(s) 177, 290
PfeI GAWTC 5 cut(s) 197, 410, 696, 1193, 1887
Pfl23II CGTACG 1 cut(s) 212
PflFI GACNNNGTC 1 cut(s) 1054
PkrI GCNGC 5 cut(s) 652, 667, 1030, 1687, 1690
PleI GAGTC 5 cut(s) 40, 943, 1029, 1449, 1491
PpsI GAGTC 5 cut(s) 40, 943, 1029, 1449, 1491
PshBI ATTAAT 1 cut(s) 1881
Psp124BI GAGCTC 1 cut(s) 104
Psp6I CCWGG 4 cut(s) 191, 1237, 1567, 1922
PspEI GGTNACC 2 cut(s) 1352, 1936
PspFI CCCAGC 1 cut(s) 588
PspGI CCWGG 4 cut(s) 191, 1237, 1567, 1922
PspLI CGTACG 1 cut(s) 212
PspN4I GGNNCC 3 cut(s) 300, 321, 352
PspPI GGNCC 3 cut(s) 298, 568, 738
PsrI GAACNNNNNNTAC 2 cut(s) 855, 887
PstI CTGCAG 1 cut(s) 1033
PsuI RGATCY 3 cut(s) 224, 278, 319
PsyI GACNNNGTC 1 cut(s) 1054
RruI TCGCGA 1 cut(s) 146
RsaI GTAC 4 cut(s) 214, 965, 986, 1910
RsaNI GTAC 4 cut(s) 213, 964, 985, 1909
RseI CAYNNNNRTG 4 cut(s) 81, 122, 1289, 1697
SacI GAGCTC 1 cut(s) 104
SacII CCGCGG 1 cut(s) 318
SalI GTCGAC 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 1467
SatI GCNGC 5 cut(s) 651, 666, 1029, 1686, 1689
Sau3AI GATC 9 cut(s) 91, 130, 224, 278, 319, 466, 487, 810, 1101
Sau96I GGNCC 3 cut(s) 298, 568, 738
SchI GAGTC 5 cut(s) 41, 943, 1030, 1450, 1491
ScrFI CCNGG 7 cut(s) 193, 274, 302, 386, 1239, 1569, 1924
SduI GDGCHC 2 cut(s) 104, 646
SexAI ACCWGGT 1 cut(s) 1237
SfaNI GCATC 3 cut(s) 73, 557, 1917
SfcI CTRYAG 1 cut(s) 1029
Sfr303I CCGCGG 1 cut(s) 318
SgrBI CCGCGG 1 cut(s) 318
SmiMI CAYNNNNRTG 4 cut(s) 81, 122, 1289, 1697
SmlI CTYRAG 1 cut(s) 1422
SmoI CTYRAG 1 cut(s) 1422
SpeI ACTAGT 1 cut(s) 1525
SphI GCATGC 1 cut(s) 1553
SsiI CCGC 7 cut(s) 136, 315, 317, 333, 607, 1224, 1905
SspMI CTAG 6 cut(s) 1059, 1074, 1266, 1380, 1526, 1838
SstI GAGCTC 1 cut(s) 104
StyD4I CCNGG 7 cut(s) 191, 272, 300, 384, 1237, 1567, 1922
StyI CCWWGG 3 cut(s) 162, 725, 2015
TaaI ACNGT 7 cut(s) 601, 994, 1054, 1432, 1708, 1720, 1738
TaiI ACGT 5 cut(s) 63, 174, 183, 965, 1299
TaqI TCGA 7 cut(s) 94, 269, 345, 413, 1196, 1214, 1767
TfiI GAWTC 5 cut(s) 197, 410, 696, 1193, 1887
TscAI CASTG 2 cut(s) 469, 999
TseFI GTSAC 2 cut(s) 946, 1176
TseI GCWGC 5 cut(s) 650, 665, 1028, 1685, 1688
Tsp45I GTSAC 2 cut(s) 946, 1176
TspDTI ATGAA 5 cut(s) 493, 804, 1187, 1671, 1817
TspRI CASTG 2 cut(s) 469, 999
Tth111I GACNNNGTC 1 cut(s) 1054
VspI ATTAAT 1 cut(s) 1881
XapI RAATTY 2 cut(s) 364, 791
XceI RCATGY 1 cut(s) 1553
XcmI CCANNNNNNNNNTGG 2 cut(s) 732, 1669
XmiI GTMKAC 4 cut(s) 168, 183, 269, 1186
XspI CTAG 6 cut(s) 1059, 1074, 1266, 1380, 1526, 1838
ZraI GACGTC 1 cut(s) 1297
Zsp2I ATGCAT 1 cut(s) 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.