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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32920 |
| malus_domestica | MD15G1067700.v1.1 |
| prunus_persica | Prupe.1G421600_v2.0.a1 |
| pyrus_communis | pycom08g06650 pycom15g06420 |
| rosa_chinensis | RchiOBHm_Chr6g0309801 |
| rosa_laevigata | RLG00000010535 |
| rosa_multiflora | Rmu_co8328543.1_g000001 Rmu_ssc0000373.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159170 |
| rosa_rugosa | Rorug06G0374700 Rorug06G0374800 Rorug06G0374900 |
| rosa_samantha | Rh6AG488200 Rh6BG497800 Rh6CG502600 Rh6DG488700 |
| rosa_wichuraiana | Rw6G042520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 54 |
| AccB1I | GGYRCC | 2 cut(s) | 54, 995 |
| AccBSI | CCGCTC | 2 cut(s) | 52, 232 |
| AclWI | GGATC | 2 cut(s) | 168, 279 |
| AcoI | YGGCCR | 3 cut(s) | 368, 392, 416 |
| AcsI | RAATTY | 1 cut(s) | 721 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AcyI | GRCGYC | 2 cut(s) | 321, 974 |
| AfaI | GTAC | 1 cut(s) | 56 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 1684 |
| AflII | CTTAAG | 1 cut(s) | 826 |
| AgsI | TTSAA | 3 cut(s) | 599, 707, 1730 |
| AjnI | CCWGG | 2 cut(s) | 998, 1677 |
| AluBI | AGCT | 5 cut(s) | 43, 223, 659, 716, 1015 |
| AluI | AGCT | 5 cut(s) | 43, 223, 659, 716, 1015 |
| AlwI | GGATC | 2 cut(s) | 168, 279 |
| ApoI | RAATTY | 1 cut(s) | 721 |
| Asp718I | GGTACC | 1 cut(s) | 54 |
| AspLEI | GCGC | 2 cut(s) | 169, 280 |
| AspS9I | GGNCC | 6 cut(s) | 70, 1160, 1244, 1328, 1412, 1436 |
| AsuC2I | CCSGG | 1 cut(s) | 74 |
| AvaII | GGWCC | 2 cut(s) | 70, 1436 |
| BanI | GGYRCC | 2 cut(s) | 54, 995 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbsI | GAAGAC | 1 cut(s) | 804 |
| BbvCI | CCTCAGC | 4 cut(s) | 1070, 1154, 1238, 1322 |
| BccI | CCATC | 4 cut(s) | 826, 830, 1058, 1703 |
| BceAI | ACGGC | 2 cut(s) | 334, 539 |
| BciT130I | CCWGG | 2 cut(s) | 1000, 1679 |
| BcnI | CCSGG | 1 cut(s) | 74 |
| BfaI | CTAG | 1 cut(s) | 717 |
| BfrI | CTTAAG | 1 cut(s) | 826 |
| BisI | GCNGC | 1 cut(s) | 479 |
| BlsI | GCNGC | 1 cut(s) | 480 |
| Bme1390I | CCNGG | 3 cut(s) | 74, 1000, 1679 |
| Bme18I | GGWCC | 2 cut(s) | 70, 1436 |
| BmgT120I | GGNCC | 6 cut(s) | 70, 1160, 1244, 1328, 1412, 1436 |
| BmiI | GGNNCC | 8 cut(s) | 6, 56, 236, 895, 997, 1161, 1245, 1329 |
| BmrFI | CCNGG | 3 cut(s) | 74, 1000, 1679 |
| BmrI | ACTGGG | 2 cut(s) | 1545, 1647 |
| BmuI | ACTGGG | 2 cut(s) | 1545, 1647 |
| BpiI | GAAGAC | 1 cut(s) | 804 |
| BpmI | CTGGAG | 2 cut(s) | 23, 203 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1070, 1154, 1238, 1322 |
| BpuMI | CCSGG | 1 cut(s) | 74 |
| BsaHI | GRCGYC | 2 cut(s) | 321, 974 |
| BsaJI | CCNNGG | 3 cut(s) | 897, 999, 1621 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1591, 1621 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 1684 |
| Bse118I | RCCGGY | 4 cut(s) | 16, 370, 394, 418 |
| Bse1I | ACTGG | 3 cut(s) | 1468, 1540, 1642 |
| Bse3DI | GCAATG | 1 cut(s) | 1720 |
| BseBI | CCWGG | 2 cut(s) | 1000, 1679 |
| BseDI | CCNNGG | 3 cut(s) | 897, 999, 1621 |
| BseGI | GGATG | 6 cut(s) | 760, 837, 841, 939, 1534, 1591 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 1684 |
| BseMI | GCAATG | 1 cut(s) | 1720 |
| BseMII | CTCAG | 5 cut(s) | 1061, 1145, 1229, 1313, 1560 |
| BseNI | ACTGG | 3 cut(s) | 1468, 1540, 1642 |
| BseX3I | CGGCCG | 3 cut(s) | 368, 392, 416 |
| Bsh1285I | CGRYCG | 3 cut(s) | 371, 395, 419 |
| BshNI | GGYRCC | 2 cut(s) | 54, 995 |
| BsiEI | CGRYCG | 3 cut(s) | 371, 395, 419 |
| BsiSI | CCGG | 6 cut(s) | 17, 73, 371, 395, 419, 482 |
| BslFI | GGGAC | 3 cut(s) | 836, 938, 1040 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 1684 |
| BsmBI | CGTCTC | 1 cut(s) | 938 |
| BsmFI | GGGAC | 3 cut(s) | 836, 938, 1040 |
| Bsp143I | GATC | 4 cut(s) | 160, 271, 352, 424 |
| BspCNI | CTCAG | 5 cut(s) | 1062, 1146, 1230, 1314, 1561 |
| BspLI | GGNNCC | 8 cut(s) | 6, 56, 236, 895, 997, 1161, 1245, 1329 |
| BspPI | GGATC | 2 cut(s) | 168, 279 |
| BspQI | GCTCTTC | 2 cut(s) | 461, 649 |
| BspT107I | GGYRCC | 2 cut(s) | 54, 995 |
| BspTI | CTTAAG | 1 cut(s) | 826 |
| BsrBI | CCGCTC | 2 cut(s) | 52, 232 |
| BsrDI | GCAATG | 1 cut(s) | 1720 |
| BsrFI | RCCGGY | 4 cut(s) | 16, 370, 394, 418 |
| BsrI | ACTGG | 3 cut(s) | 1468, 1540, 1642 |
| BssAI | RCCGGY | 4 cut(s) | 16, 370, 394, 418 |
| BssECI | CCNNGG | 3 cut(s) | 897, 999, 1621 |
| BssMI | GATC | 4 cut(s) | 160, 271, 352, 424 |
| BssNI | GRCGYC | 2 cut(s) | 321, 974 |
| BssT1I | CCWWGG | 1 cut(s) | 897 |
| Bst2UI | CCWGG | 2 cut(s) | 1000, 1679 |
| Bst4CI | ACNGT | 2 cut(s) | 1622, 1668 |
| Bst6I | CTCTTC | 4 cut(s) | 288, 461, 649, 897 |
| BstACI | GRCGYC | 2 cut(s) | 321, 974 |
| BstAFI | CTTAAG | 1 cut(s) | 826 |
| BstC8I | GCNNGC | 3 cut(s) | 18, 261, 1675 |
| BstDEI | CTNAG | 5 cut(s) | 1070, 1154, 1238, 1322, 1569 |
| BstDSI | CCRYGG | 1 cut(s) | 1621 |
| BstF5I | GGATG | 6 cut(s) | 760, 837, 841, 939, 1534, 1591 |
| BstHHI | GCGC | 2 cut(s) | 169, 280 |
| BstKTI | GATC | 4 cut(s) | 163, 274, 355, 427 |
| BstMBI | GATC | 4 cut(s) | 160, 271, 352, 424 |
| BstMCI | CGRYCG | 3 cut(s) | 371, 395, 419 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 13, 49, 229, 973, 1159, 1243, 1327, 1411, 1679 |
| BstNI | CCWGG | 2 cut(s) | 1000, 1679 |
| BstSCI | CCNGG | 3 cut(s) | 72, 998, 1677 |
| BstV2I | GAAGAC | 1 cut(s) | 804 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1516 |
| BstZI | CGGCCG | 3 cut(s) | 368, 392, 416 |
| BtgI | CCRYGG | 1 cut(s) | 1621 |
| BtsCI | GGATG | 6 cut(s) | 760, 837, 841, 939, 1534, 1591 |
| BtsIMutI | CAGTG | 2 cut(s) | 444, 1673 |
| Cac8I | GCNNGC | 3 cut(s) | 18, 261, 1675 |
| CfoI | GCGC | 2 cut(s) | 169, 280 |
| Cfr10I | RCCGGY | 4 cut(s) | 16, 370, 394, 418 |
| Cfr13I | GGNCC | 6 cut(s) | 70, 1160, 1244, 1328, 1412, 1436 |
| CseI | GACGC | 2 cut(s) | 310, 982 |
| Csp6I | GTAC | 1 cut(s) | 55 |
| CviAII | CATG | 3 cut(s) | 1127, 1295, 1379 |
| CviQI | GTAC | 1 cut(s) | 55 |
| DdeI | CTNAG | 5 cut(s) | 1070, 1154, 1238, 1322, 1569 |
| DpnI | GATC | 4 cut(s) | 162, 273, 354, 426 |
| DpnII | GATC | 4 cut(s) | 160, 271, 352, 424 |
| EaeI | YGGCCR | 3 cut(s) | 368, 392, 416 |
| EagI | CGGCCG | 3 cut(s) | 368, 392, 416 |
| Eam1104I | CTCTTC | 4 cut(s) | 288, 461, 649, 897 |
| EarI | CTCTTC | 4 cut(s) | 288, 461, 649, 897 |
| EciI | GGCGGA | 2 cut(s) | 541, 880 |
| EclXI | CGGCCG | 3 cut(s) | 368, 392, 416 |
| Eco130I | CCWWGG | 1 cut(s) | 897 |
| Eco47I | GGWCC | 2 cut(s) | 70, 1436 |
| Eco52I | CGGCCG | 3 cut(s) | 368, 392, 416 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRII | CCWGG | 2 cut(s) | 998, 1677 |
| EcoT14I | CCWWGG | 1 cut(s) | 897 |
| ErhI | CCWWGG | 1 cut(s) | 897 |
| Esp3I | CGTCTC | 1 cut(s) | 938 |
| FaeI | CATG | 3 cut(s) | 1130, 1298, 1382 |
| FaiI | YATR | 4 cut(s) | 1128, 1296, 1380, 1550 |
| FaqI | GGGAC | 3 cut(s) | 836, 938, 1040 |
| FatI | CATG | 3 cut(s) | 1126, 1294, 1378 |
| Fnu4HI | GCNGC | 1 cut(s) | 479 |
| FokI | GGATG | 6 cut(s) | 767, 844, 848, 946, 1541, 1598 |
| Fsp4HI | GCNGC | 1 cut(s) | 479 |
| FspBI | CTAG | 1 cut(s) | 717 |
| GlaI | GCGC | 2 cut(s) | 168, 279 |
| GluI | GCNGC | 1 cut(s) | 479 |
| GsuI | CTGGAG | 2 cut(s) | 23, 203 |
| HapII | CCGG | 6 cut(s) | 17, 73, 371, 395, 419, 482 |
| HgaI | GACGC | 2 cut(s) | 310, 982 |
| HhaI | GCGC | 2 cut(s) | 169, 280 |
| Hin1I | GRCGYC | 2 cut(s) | 321, 974 |
| Hin1II | CATG | 3 cut(s) | 1130, 1298, 1382 |
| Hin6I | GCGC | 2 cut(s) | 167, 278 |
| HinP1I | GCGC | 2 cut(s) | 167, 278 |
| HinfI | GANTC | 2 cut(s) | 364, 1553 |
| HpaII | CCGG | 6 cut(s) | 17, 73, 371, 395, 419, 482 |
| Hpy166II | GTNNAC | 1 cut(s) | 1436 |
| Hpy188I | TCNGA | 7 cut(s) | 357, 381, 405, 429, 632, 1615, 1708 |
| Hpy188III | TCNNGA | 2 cut(s) | 238, 599 |
| Hpy8I | GTNNAC | 1 cut(s) | 1436 |
| Hpy99I | CGWCG | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 2 cut(s) | 1622, 1668 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 207 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 13, 49, 229, 973, 1159, 1243, 1327, 1411, 1679 |
| HpyF3I | CTNAG | 5 cut(s) | 1070, 1154, 1238, 1322, 1569 |
| HpySE526I | ACGT | 2 cut(s) | 27, 207 |
| Hsp92I | GRCGYC | 2 cut(s) | 321, 974 |
| Hsp92II | CATG | 3 cut(s) | 1130, 1298, 1382 |
| HspAI | GCGC | 2 cut(s) | 167, 278 |
| KpnI | GGTACC | 1 cut(s) | 58 |
| KroI | GCCGGC | 1 cut(s) | 16 |
| KroNI | GCCGGC | 1 cut(s) | 18 |
| Kzo9I | GATC | 4 cut(s) | 160, 271, 352, 424 |
| LguI | GCTCTTC | 2 cut(s) | 461, 649 |
| LmnI | GCTCC | 8 cut(s) | 4, 42, 49, 76, 121, 184, 250, 893 |
| MaeI | CTAG | 1 cut(s) | 717 |
| MaeII | ACGT | 2 cut(s) | 27, 207 |
| MaeIII | GTNAC | 4 cut(s) | 28, 208, 1459, 1643 |
| MalI | GATC | 4 cut(s) | 162, 273, 354, 426 |
| MbiI | CCGCTC | 2 cut(s) | 52, 232 |
| MboI | GATC | 4 cut(s) | 160, 271, 352, 424 |
| MluCI | AATT | 3 cut(s) | 302, 721, 1451 |
| MlyI | GAGTC | 1 cut(s) | 1547 |
| MroNI | GCCGGC | 1 cut(s) | 16 |
| MseI | TTAA | 3 cut(s) | 375, 399, 827 |
| MspA1I | CMGCKG | 1 cut(s) | 43 |
| MspCI | CTTAAG | 1 cut(s) | 826 |
| MspI | CCGG | 6 cut(s) | 17, 73, 371, 395, 419, 482 |
| MspR9I | CCNGG | 3 cut(s) | 74, 1000, 1679 |
| MvaI | CCWGG | 2 cut(s) | 1000, 1679 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 13, 49, 229, 973, 1159, 1243, 1327, 1411, 1679 |
| NaeI | GCCGGC | 1 cut(s) | 18 |
| NciI | CCSGG | 1 cut(s) | 74 |
| NdeII | GATC | 4 cut(s) | 160, 271, 352, 424 |
| NgoMIV | GCCGGC | 1 cut(s) | 16 |
| NlaIII | CATG | 3 cut(s) | 1130, 1298, 1382 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 56, 236, 895, 997, 1161, 1245, 1329 |
| NmuCI | GTSAC | 3 cut(s) | 28, 208, 1459 |
| PciSI | GCTCTTC | 2 cut(s) | 461, 649 |
| PdiI | GCCGGC | 1 cut(s) | 18 |
| PfeI | GAWTC | 1 cut(s) | 364 |
| PflFI | GACNNNGTC | 1 cut(s) | 320 |
| PkrI | GCNGC | 1 cut(s) | 480 |
| PleI | GAGTC | 1 cut(s) | 1547 |
| PpsI | GAGTC | 1 cut(s) | 1547 |
| Psp6I | CCWGG | 2 cut(s) | 998, 1677 |
| PspGI | CCWGG | 2 cut(s) | 998, 1677 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 56, 236, 895, 997, 1161, 1245, 1329 |
| PspPI | GGNCC | 6 cut(s) | 70, 1160, 1244, 1328, 1412, 1436 |
| PsyI | GACNNNGTC | 1 cut(s) | 320 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 56 |
| RsaNI | GTAC | 1 cut(s) | 55 |
| SapI | GCTCTTC | 2 cut(s) | 461, 649 |
| SaqAI | TTAA | 3 cut(s) | 375, 399, 827 |
| SatI | GCNGC | 1 cut(s) | 479 |
| Sau3AI | GATC | 4 cut(s) | 160, 271, 352, 424 |
| Sau96I | GGNCC | 6 cut(s) | 70, 1160, 1244, 1328, 1412, 1436 |
| SchI | GAGTC | 1 cut(s) | 1547 |
| ScrFI | CCNGG | 3 cut(s) | 74, 1000, 1679 |
| SinI | GGWCC | 2 cut(s) | 70, 1436 |
| SmlI | CTYRAG | 1 cut(s) | 826 |
| SmoI | CTYRAG | 1 cut(s) | 826 |
| Sse9I | AATT | 3 cut(s) | 302, 721, 1451 |
| SspI | AATATT | 1 cut(s) | 538 |
| SspMI | CTAG | 1 cut(s) | 717 |
| StyD4I | CCNGG | 3 cut(s) | 72, 998, 1677 |
| StyI | CCWWGG | 1 cut(s) | 897 |
| TaaI | ACNGT | 2 cut(s) | 1622, 1668 |
| TaiI | ACGT | 2 cut(s) | 30, 210 |
| TaqI | TCGA | 7 cut(s) | 163, 274, 1034, 1121, 1205, 1289, 1373 |
| TasI | AATT | 3 cut(s) | 302, 721, 1451 |
| TauI | GCSGC | 1 cut(s) | 481 |
| TfiI | GAWTC | 1 cut(s) | 364 |
| Tru1I | TTAA | 3 cut(s) | 375, 399, 827 |
| Tru9I | TTAA | 3 cut(s) | 375, 399, 827 |
| TscAI | CASTG | 2 cut(s) | 444, 1673 |
| TseFI | GTSAC | 3 cut(s) | 28, 208, 1459 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 208, 1459 |
| TspDTI | ATGAA | 4 cut(s) | 950, 1052, 1577, 1602 |
| TspGWI | ACGGA | 2 cut(s) | 121, 962 |
| TspRI | CASTG | 2 cut(s) | 444, 1673 |
| Tth111I | GACNNNGTC | 1 cut(s) | 320 |
| Vha464I | CTTAAG | 1 cut(s) | 826 |
| VpaK11BI | GGWCC | 2 cut(s) | 70, 1436 |
| XapI | RAATTY | 1 cut(s) | 721 |
| XspI | CTAG | 1 cut(s) | 717 |