Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0195631 RchiOBHm_Chr7g0195641 RchiOBHm_Chr7g0211811 |
| rosa_multiflora | Rmu_sc0003314.1_g000004 Rmu_sc0010418.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00260270 Rroxscaffold_4G00308620 |
| rosa_rugosa | Rorug07G0025200 Rorug07G0025300 |
| rosa_samantha | Rh4AG083700 Rh4CG090800 Rh7AG152800 Rh7BG154300 Rh7CG158000 Rh7CG158100 Rh7CG158200 Rh7DG153800 |
| rosa_wichuraiana | Rw7G013060 Rw7G013070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 113 |
| AciI | CCGC | 6 cut(s) | 26, 40, 64, 96, 378, 452 |
| AfaI | GTAC | 1 cut(s) | 467 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 73, 107 |
| AgsI | TTSAA | 5 cut(s) | 219, 327, 336, 372, 428 |
| AjnI | CCWGG | 1 cut(s) | 66 |
| AluBI | AGCT | 2 cut(s) | 176, 222 |
| AluI | AGCT | 2 cut(s) | 176, 222 |
| Alw26I | GTCTC | 2 cut(s) | 41, 83 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 421 |
| AoxI | GGCC | 6 cut(s) | 6, 36, 60, 97, 179, 411 |
| ApeKI | GCWGC | 1 cut(s) | 169 |
| AspLEI | GCGC | 1 cut(s) | 113 |
| AspS9I | GGNCC | 5 cut(s) | 7, 37, 61, 98, 412 |
| AsuHPI | GGTGA | 1 cut(s) | 355 |
| BbsI | GAAGAC | 1 cut(s) | 302 |
| BbvI | GCAGC | 1 cut(s) | 156 |
| BccI | CCATC | 2 cut(s) | 79, 368 |
| BceAI | ACGGC | 3 cut(s) | 66, 90, 439 |
| BciT130I | CCWGG | 1 cut(s) | 68 |
| BciVI | GTATCC | 1 cut(s) | 64 |
| BclI | TGATCA | 1 cut(s) | 343 |
| BcoDI | GTCTC | 2 cut(s) | 41, 83 |
| BfaI | CTAG | 1 cut(s) | 522 |
| BfuI | GTATCC | 1 cut(s) | 64 |
| BisI | GCNGC | 2 cut(s) | 97, 170 |
| BlsI | GCNGC | 2 cut(s) | 98, 171 |
| Bme1390I | CCNGG | 1 cut(s) | 68 |
| BmgT120I | GGNCC | 5 cut(s) | 7, 37, 61, 98, 412 |
| BmrFI | CCNGG | 1 cut(s) | 68 |
| BmrI | ACTGGG | 1 cut(s) | 409 |
| BmsI | GCATC | 2 cut(s) | 156, 167 |
| BmuI | ACTGGG | 1 cut(s) | 409 |
| BpiI | GAAGAC | 1 cut(s) | 302 |
| BsaJI | CCNNGG | 1 cut(s) | 459 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 73, 107 |
| Bse1I | ACTGG | 2 cut(s) | 97, 415 |
| BseBI | CCWGG | 1 cut(s) | 68 |
| BseDI | CCNNGG | 1 cut(s) | 459 |
| BseGI | GGATG | 1 cut(s) | 36 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 73, 107 |
| BseNI | ACTGG | 2 cut(s) | 97, 415 |
| BseXI | GCAGC | 1 cut(s) | 156 |
| Bsh1236I | CGCG | 1 cut(s) | 113 |
| BshFI | GGCC | 6 cut(s) | 8, 38, 62, 99, 181, 413 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 73, 107 |
| BsmAI | GTCTC | 2 cut(s) | 41, 83 |
| BsmBI | CGTCTC | 1 cut(s) | 41 |
| BsnI | GGCC | 6 cut(s) | 8, 38, 62, 99, 181, 413 |
| Bsp1407I | TGTACA | 1 cut(s) | 465 |
| Bsp143I | GATC | 1 cut(s) | 343 |
| Bsp19I | CCATGG | 1 cut(s) | 459 |
| BspACI | CCGC | 6 cut(s) | 26, 40, 64, 96, 378, 452 |
| BspANI | GGCC | 6 cut(s) | 8, 38, 62, 99, 181, 413 |
| BspFNI | CGCG | 1 cut(s) | 113 |
| BsrGI | TGTACA | 1 cut(s) | 465 |
| BsrI | ACTGG | 2 cut(s) | 97, 415 |
| BssECI | CCNNGG | 1 cut(s) | 459 |
| BssMI | GATC | 1 cut(s) | 343 |
| BssT1I | CCWWGG | 1 cut(s) | 459 |
| Bst2UI | CCWGG | 1 cut(s) | 68 |
| Bst4CI | ACNGT | 1 cut(s) | 367 |
| BstAUI | TGTACA | 1 cut(s) | 465 |
| BstC8I | GCNNGC | 3 cut(s) | 40, 64, 174 |
| BstDEI | CTNAG | 2 cut(s) | 387, 505 |
| BstDSI | CCRYGG | 1 cut(s) | 459 |
| BstF5I | GGATG | 1 cut(s) | 36 |
| BstFNI | CGCG | 1 cut(s) | 113 |
| BstHHI | GCGC | 1 cut(s) | 113 |
| BstKTI | GATC | 1 cut(s) | 346 |
| BstMAI | GTCTC | 2 cut(s) | 41, 83 |
| BstMBI | GATC | 1 cut(s) | 343 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 59, 110, 178, 219 |
| BstNI | CCWGG | 1 cut(s) | 68 |
| BstSCI | CCNGG | 1 cut(s) | 66 |
| BstUI | CGCG | 1 cut(s) | 113 |
| BstV1I | GCAGC | 1 cut(s) | 156 |
| BstV2I | GAAGAC | 1 cut(s) | 302 |
| BsuI | GTATCC | 1 cut(s) | 64 |
| BsuRI | GGCC | 6 cut(s) | 8, 38, 62, 99, 181, 413 |
| BtgI | CCRYGG | 1 cut(s) | 459 |
| BtsCI | GGATG | 1 cut(s) | 36 |
| BtsIMutI | CAGTG | 1 cut(s) | 422 |
| Cac8I | GCNNGC | 3 cut(s) | 40, 64, 174 |
| CaiI | CAGNNNCTG | 1 cut(s) | 421 |
| CfoI | GCGC | 1 cut(s) | 113 |
| Cfr13I | GGNCC | 5 cut(s) | 7, 37, 61, 98, 412 |
| CseI | GACGC | 1 cut(s) | 401 |
| Csp6I | GTAC | 1 cut(s) | 466 |
| CviAII | CATG | 3 cut(s) | 13, 43, 460 |
| CviJI | RGCY | 8 cut(s) | 8, 38, 62, 99, 176, 181, 222, 413 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 38, 62, 99, 176, 181, 222, 413 |
| CviQI | GTAC | 1 cut(s) | 466 |
| DdeI | CTNAG | 2 cut(s) | 387, 505 |
| DpnI | GATC | 1 cut(s) | 345 |
| DpnII | GATC | 1 cut(s) | 343 |
| EciI | GGCGGA | 1 cut(s) | 441 |
| Eco130I | CCWWGG | 1 cut(s) | 459 |
| EcoRII | CCWGG | 1 cut(s) | 66 |
| EcoT14I | CCWWGG | 1 cut(s) | 459 |
| ErhI | CCWWGG | 1 cut(s) | 459 |
| Esp3I | CGTCTC | 1 cut(s) | 41 |
| FaeI | CATG | 3 cut(s) | 16, 46, 463 |
| FatI | CATG | 3 cut(s) | 12, 42, 459 |
| FauI | CCCGC | 3 cut(s) | 19, 47, 71 |
| FauNDI | CATATG | 1 cut(s) | 397 |
| FbaI | TGATCA | 1 cut(s) | 343 |
| Fnu4HI | GCNGC | 2 cut(s) | 97, 170 |
| FokI | GGATG | 1 cut(s) | 43 |
| Fsp4HI | GCNGC | 2 cut(s) | 97, 170 |
| FspBI | CTAG | 1 cut(s) | 522 |
| GlaI | GCGC | 1 cut(s) | 112 |
| GluI | GCNGC | 2 cut(s) | 97, 170 |
| HaeIII | GGCC | 6 cut(s) | 8, 38, 62, 99, 181, 413 |
| HgaI | GACGC | 1 cut(s) | 401 |
| HhaI | GCGC | 1 cut(s) | 113 |
| Hin1II | CATG | 3 cut(s) | 16, 46, 463 |
| Hin6I | GCGC | 1 cut(s) | 111 |
| HinP1I | GCGC | 1 cut(s) | 111 |
| HindIII | AAGCTT | 1 cut(s) | 174 |
| HinfI | GANTC | 2 cut(s) | 191, 323 |
| HphI | GGTGA | 1 cut(s) | 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 466 |
| Hpy8I | GTNNAC | 1 cut(s) | 466 |
| HpyAV | CCTTC | 2 cut(s) | 13, 483 |
| HpyCH4III | ACNGT | 1 cut(s) | 367 |
| HpyCH4V | TGCA | 2 cut(s) | 172, 440 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 59, 110, 178, 219 |
| HpyF3I | CTNAG | 2 cut(s) | 387, 505 |
| Hsp92II | CATG | 3 cut(s) | 16, 46, 463 |
| HspAI | GCGC | 1 cut(s) | 111 |
| Ksp22I | TGATCA | 1 cut(s) | 343 |
| Kzo9I | GATC | 1 cut(s) | 343 |
| LpnPI | CCDG | 9 cut(s) | 53, 78, 80, 90, 114, 173, 332, 352, 428 |
| Lsp1109I | GCAGC | 1 cut(s) | 156 |
| LweI | GCATC | 2 cut(s) | 156, 167 |
| MaeI | CTAG | 1 cut(s) | 522 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MalI | GATC | 1 cut(s) | 345 |
| MboI | GATC | 1 cut(s) | 343 |
| MboII | GAAGA | 5 cut(s) | 133, 186, 302, 468, 471 |
| MluCI | AATT | 3 cut(s) | 318, 355, 484 |
| MnlI | CCTC | 5 cut(s) | 16, 20, 48, 72, 136 |
| MseI | TTAA | 2 cut(s) | 297, 317 |
| MspR9I | CCNGG | 1 cut(s) | 68 |
| MvaI | CCWGG | 1 cut(s) | 68 |
| MvnI | CGCG | 1 cut(s) | 113 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 59, 110, 178, 219 |
| NcoI | CCATGG | 1 cut(s) | 459 |
| NdeI | CATATG | 1 cut(s) | 397 |
| NdeII | GATC | 1 cut(s) | 343 |
| NlaIII | CATG | 3 cut(s) | 16, 46, 463 |
| NmuCI | GTSAC | 1 cut(s) | 121 |
| PfeI | GAWTC | 2 cut(s) | 191, 323 |
| PkrI | GCNGC | 2 cut(s) | 98, 171 |
| Psp6I | CCWGG | 1 cut(s) | 66 |
| PspGI | CCWGG | 1 cut(s) | 66 |
| PspPI | GGNCC | 5 cut(s) | 7, 37, 61, 98, 412 |
| PstNI | CAGNNNCTG | 1 cut(s) | 421 |
| RsaI | GTAC | 1 cut(s) | 467 |
| RsaNI | GTAC | 1 cut(s) | 466 |
| SaqAI | TTAA | 2 cut(s) | 297, 317 |
| SatI | GCNGC | 2 cut(s) | 97, 170 |
| Sau3AI | GATC | 1 cut(s) | 343 |
| Sau96I | GGNCC | 5 cut(s) | 7, 37, 61, 98, 412 |
| ScrFI | CCNGG | 1 cut(s) | 68 |
| SetI | ASST | 7 cut(s) | 59, 128, 178, 224, 341, 475, 527 |
| SfaNI | GCATC | 2 cut(s) | 156, 167 |
| Sse9I | AATT | 3 cut(s) | 318, 355, 484 |
| SsiI | CCGC | 6 cut(s) | 26, 40, 64, 96, 378, 452 |
| SspI | AATATT | 1 cut(s) | 513 |
| SspMI | CTAG | 1 cut(s) | 522 |
| StyD4I | CCNGG | 1 cut(s) | 66 |
| StyI | CCWWGG | 1 cut(s) | 459 |
| TaaI | ACNGT | 1 cut(s) | 367 |
| TasI | AATT | 3 cut(s) | 318, 355, 484 |
| TatI | WGTACW | 1 cut(s) | 465 |
| TauI | GCSGC | 1 cut(s) | 99 |
| TfiI | GAWTC | 2 cut(s) | 191, 323 |
| Tru1I | TTAA | 2 cut(s) | 297, 317 |
| Tru9I | TTAA | 2 cut(s) | 297, 317 |
| TscAI | CASTG | 1 cut(s) | 422 |
| TseFI | GTSAC | 1 cut(s) | 121 |
| TseI | GCWGC | 1 cut(s) | 169 |
| Tsp45I | GTSAC | 1 cut(s) | 121 |
| TspDTI | ATGAA | 1 cut(s) | 478 |
| TspRI | CASTG | 1 cut(s) | 422 |
| XspI | CTAG | 1 cut(s) | 522 |