Rorug07G0025300

Belongs to the short-chain dehydrogenases reductases (SDR) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0012698
Physical Location & Seq
Reverse (-)
1802128 .. 1805938
3811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0025300.1

Sequence Viewer

Length: 1806 bp
ATGGAGTTTCATTCAGGTCGAACTGTCCCAGAAGCATCCCAGACGGGTCCAAATTCCTCTGATGACAGGCCACTGTGCGCAGTTGGGTGTTGCCGGGCTTCGAGAATGTCGCAGAAGAGACACCAGGATGATGGCAAGGGGAGTTATCGATCAGAAGGGACGACTGGTAGTCCGGGGGATAAGCGCCGGAGGACTACTTTTCAGAATGTGGTTTCGGAAATAATGAAGTTGCACACTGTCCAGCATTTGCTGGAGCCAATTCTTGAGCCTTTGATTCGCAGAGTGGTCAGAGAGGAAGTAGAATTGGCCCTAAGGAAACATTTGAACAATATGAAACAGAATTGTGAGAAAGAGACTCAACCTTCTGAATCAAGAATCTTAAAGCTACAGTTCTTAAACAGTCTGTCTCTTCCGGTATTTACTGGAGCTCGGATTGAAGGAGAAGAGAGTTCCAGTATCCAAGTAGCTTTGATTGATTGCTTTACTGGCCAAATAGTTAAATCTGGCCCTGAATCCGCAGCTAAAGTGGAAATTGTTGTCCTTGAGGGTGATTTTGATGGTGAGGAGGGTGACAATTGGACCCCTGAAGAGTTCAAGAATAACATTGTAAGAGAGAGGGAAGGCAAAAAACCTCTTCTAACAGGGGAAGCAGTCATCAATCTTAATGATGGAGTTGTTTCTGTGAGTGAGATTTCTTTTACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGTTAGGAGCAAGAGTTGTAGATAATTTTGATGGAACTAGAGTGAGAGAAGCAAAGACAGAATCCTTTATTGTCAGGGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCATCTCTGCTTGATGAAGTATGGCGACTAGAAAAGATTGGAAAGGATGGAGCTTTCCATAAGCGTTTGACTCGGGAAAACATCCGCACCGTGAAGGATTTCCTCACCCTACTCTTCATAAACCCTCCAAGGCTCCGCCATATCCTTGGCACAGGTATGTCTACTAAGATGTGGGAAGTCACAGTGGAGCATGCTCAGACATGCATACTTGATAAGAGGATATACTTGTACTGCCCTCCCAGTTCACAACAGAGAACTGGTGTGGTCTTCAACGTTGTAGGACAAGTAACATACCTACTTTTGGAATGCGAATATATTCCTCTCAGTAAGCTTTCTGAAACACAAAAGGTTGATGCCCAGAACTTGGTACTTTCTGCATTTGAACACTGGGGAGAAGTAGTCTCATTTGATGATGAGGCTTCTCTTTTGGGTGGGGGCTCATCCAATGTTCATCAGACATCAAGTTCACCAAGAGGAGAGGAGTTTACTGGAAGCAAGTTTATGACTACTCAAAAAATTGGCGGATTTGATTATACACAGGCATCCGCCTCTTCTCCTGATATCATTTCATCCATGTATTCTGTGGGGGGCACAAGTGGCTTGGATGATTATGCCTTGCACAACATTGATGGAATGGGTCTTAGATATGACCAGAGTTTAAGCTTCCCAGGTCAAGTTGGGAATTCCCTGATCTGTGACCCAGATTCAATAGCTGCATTTTGTGATGATCATCTACAGTTTTTTGATACTGATCTTCAGTCCCAGAGCATGCTTCCAGAGTCACCAGCAGATCTACAAAGCGCTGTAGATGGCTTCTTGTTGGCACAACGTTCGACTGCTGCTGTTGCCGCCATAGATAAGGCTCAGAGGAGATGGACAAAACTATTCAGTGTCCTCAAGTGGTTCTCAATTCAGAGGAGCGTGCGGAACCGGGTTCGAGACATTCCAAGATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00590 ko00790 ko00980 ko01100 ko05204 map00590 map00790 map00980 map01100 map05204
Pfam Domains
Protein Families
adh_short

Protein Analysis

601

Amino Acids

67.33

Weight (kDa)

6.15

Isoelectric Point (pI)

49.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Calmodulin_bind PF07887 127 - 273 2.2e-61 Calmodulin binding protein-like N-terminal domain
Calmod_bind_M PF20451 286 - 351 4.9e-32 Calmodulin binding protein central domain
Calmod_bind_C PF20452 357 - 418 6.7e-17 Calmodulin binding protein C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 79
AccB7I CCANNNNNTGG 1 cut(s) 1213
AccI GTMKAC 1 cut(s) 1010
AciI CCGC 7 cut(s) 516, 934, 985, 1371, 1395, 1698, 1774
AclI AACGTT 2 cut(s) 1122, 1678
AclWI GGATC 1 cut(s) 822
AcoI YGGCCR 1 cut(s) 487
AcsI RAATTY 2 cut(s) 52, 1531
AcuI CTGAAG 2 cut(s) 606, 1589
AfaI GTAC 3 cut(s) 833, 1079, 1218
AfeI AGCGCT 1 cut(s) 1651
AfiI CCNNNNNNNGG 2 cut(s) 1150, 1213
AgsI TTSAA 7 cut(s) 325, 437, 595, 711, 1120, 1232, 1557
AhdI GACNNNNNGTC 1 cut(s) 168
AjnI CCWGG 2 cut(s) 123, 1516
AluBI AGCT 9 cut(s) 385, 428, 467, 521, 714, 902, 1180, 1512, 1562
AluI AGCT 9 cut(s) 385, 428, 467, 521, 714, 902, 1180, 1512, 1562
Alw21I GWGCWC 1 cut(s) 430
Alw26I GTCTC 5 cut(s) 112, 347, 411, 1255, 1782
AlwI GGATC 1 cut(s) 822
Ama87I CYCGRG 1 cut(s) 921
Aor51HI AGCGCT 1 cut(s) 1651
AoxI GGCC 4 cut(s) 68, 306, 487, 505
ApeKI GCWGC 3 cut(s) 518, 1562, 1688
ApoI RAATTY 2 cut(s) 52, 1531
Asp700I GAANNNNTTC 2 cut(s) 947, 1164
AspLEI GCGC 3 cut(s) 80, 186, 1652
AspS9I GGNCC 4 cut(s) 47, 307, 506, 579
AsuC2I CCSGG 3 cut(s) 95, 174, 1781
AsuHPI GGTGA 7 cut(s) 560, 572, 581, 809, 946, 1308, 1623
AvaI CYCGRG 1 cut(s) 921
AvaII GGWCC 2 cut(s) 47, 579
AxyI CCTNAGG 1 cut(s) 311
BaeGI GKGCMC 1 cut(s) 1442
BalI TGGCCA 1 cut(s) 489
BanII GRGCYC 2 cut(s) 430, 1289
BbsI GAAGAC 1 cut(s) 1108
Bbv12I GWGCWC 1 cut(s) 430
BbvI GCAGC 3 cut(s) 530, 1549, 1675
BccI CCATC 9 cut(s) 125, 551, 662, 761, 859, 890, 1472, 1652, 1716
BceAI ACGGC 1 cut(s) 711
BcgI CGANNNNNNTGC 2 cut(s) 1662, 1696
BciT130I CCWGG 2 cut(s) 125, 1518
BciVI GTATCC 1 cut(s) 467
BclI TGATCA 1 cut(s) 1576
BcnI CCSGG 3 cut(s) 95, 174, 1781
BcoDI GTCTC 5 cut(s) 112, 347, 411, 1255, 1782
BfaI CTAG 3 cut(s) 774, 878, 1804
BfmI CTRYAG 3 cut(s) 386, 1583, 1653
BfoI RGCGCY 2 cut(s) 187, 1653
BfuI GTATCC 1 cut(s) 467
BglII AGATCT 1 cut(s) 1639
BisI GCNGC 4 cut(s) 519, 1563, 1689, 1698
BlsI GCNGC 4 cut(s) 520, 1564, 1690, 1699
Bme1390I CCNGG 5 cut(s) 95, 125, 174, 1518, 1781
Bme18I GGWCC 2 cut(s) 47, 579
BmeRI GACNNNNNGTC 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 921
BmgT120I GGNCC 4 cut(s) 47, 307, 506, 579
BmiI GGNNCC 6 cut(s) 48, 255, 581, 725, 983, 1778
BmrFI CCNGG 5 cut(s) 95, 125, 174, 1518, 1781
BmrI ACTGGG 2 cut(s) 1083, 1246
BmsI GCATC 3 cut(s) 44, 1192, 1400
BmuI ACTGGG 2 cut(s) 1083, 1246
BpiI GAAGAC 1 cut(s) 1108
BpmI CTGGAG 2 cut(s) 272, 444
BpuEI CTTGAG 3 cut(s) 284, 563, 1730
BpuMI CCSGG 3 cut(s) 95, 174, 1781
Bsa29I ATCGAT 1 cut(s) 148
BsaBI GATNNNNATC 2 cut(s) 1578, 1599
BsaJI CCNNGG 5 cut(s) 173, 820, 977, 994, 1516
BsaWI WCCGGW 1 cut(s) 412
BsaXI ACNNNNNCTCC 4 cut(s) 735, 765, 1233, 1263
Bsc4I CCNNNNNNNGG 2 cut(s) 1150, 1213
Bse1I ACTGG 8 cut(s) 169, 427, 453, 490, 1089, 1111, 1241, 1342
Bse21I CCTNAGG 1 cut(s) 311
Bse8I GATNNNNATC 2 cut(s) 1578, 1599
BseBI CCWGG 2 cut(s) 125, 1518
BseCI ATCGAT 1 cut(s) 148
BseDI CCNNGG 5 cut(s) 173, 820, 977, 994, 1516
BseGI GGATG 8 cut(s) 35, 133, 901, 930, 1289, 1391, 1418, 1459
BseJI GATNNNNATC 2 cut(s) 1578, 1599
BseLI CCNNNNNNNGG 2 cut(s) 1150, 1213
BseMII CTCAG 3 cut(s) 1058, 1186, 1727
BseNI ACTGG 8 cut(s) 169, 427, 453, 490, 1089, 1111, 1241, 1342
BseRI GAGGAG 5 cut(s) 578, 1338, 1343, 1732, 1780
BseSI GKGCMC 1 cut(s) 1442
BseXI GCAGC 3 cut(s) 530, 1549, 1675
BshFI GGCC 4 cut(s) 70, 308, 489, 507
BshVI ATCGAT 1 cut(s) 148
BsiHKAI GWGCWC 1 cut(s) 430
BsiHKCI CYCGRG 1 cut(s) 921
BsiSI CCGG 5 cut(s) 94, 173, 187, 413, 1780
BslFI GGGAC 3 cut(s) 11, 172, 1594
BslI CCNNNNNNNGG 2 cut(s) 1150, 1213
BsmAI GTCTC 5 cut(s) 112, 347, 411, 1255, 1782
BsmFI GGGAC 3 cut(s) 11, 172, 1594
BsmI GAATGC 1 cut(s) 1160
BsnI GGCC 4 cut(s) 70, 308, 489, 507
BsoBI CYCGRG 1 cut(s) 921
Bsp1286I GDGCHC 3 cut(s) 430, 1289, 1442
Bsp1407I TGTACA 1 cut(s) 831
Bsp143I GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
BspACI CCGC 7 cut(s) 516, 934, 985, 1371, 1395, 1698, 1774
BspANI GGCC 4 cut(s) 70, 308, 489, 507
BspCNI CTCAG 3 cut(s) 1057, 1185, 1726
BspDI ATCGAT 1 cut(s) 148
BspLI GGNNCC 6 cut(s) 48, 255, 581, 725, 983, 1778
BspPI GGATC 1 cut(s) 822
BsrGI TGTACA 1 cut(s) 831
BsrI ACTGG 8 cut(s) 169, 427, 453, 490, 1089, 1111, 1241, 1342
BssECI CCNNGG 5 cut(s) 173, 820, 977, 994, 1516
BssMI GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
BssT1I CCWWGG 2 cut(s) 977, 994
Bst2UI CCWGG 2 cut(s) 125, 1518
Bst4CI ACNGT 9 cut(s) 25, 75, 238, 390, 401, 821, 940, 1033, 1587
Bst6I CTCTTC 7 cut(s) 110, 414, 438, 582, 639, 968, 1405
BstAUI TGTACA 1 cut(s) 831
BstC8I GCNNGC 3 cut(s) 1041, 1619, 1772
BstDEI CTNAG 6 cut(s) 311, 1014, 1044, 1172, 1490, 1713
BstDSI CCRYGG 1 cut(s) 820
BstF5I GGATG 8 cut(s) 35, 133, 901, 930, 1289, 1391, 1418, 1459
BstH2I RGCGCY 2 cut(s) 187, 1653
BstHHI GCGC 3 cut(s) 80, 186, 1652
BstKTI GATC 6 cut(s) 152, 817, 1542, 1579, 1603, 1642
BstMAI GTCTC 5 cut(s) 112, 347, 411, 1255, 1782
BstMBI GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
BstMWI GCNNNNNNNGC 4 cut(s) 486, 1446, 1694, 1697
BstNI CCWGG 2 cut(s) 125, 1518
BstNSI RCATGY 3 cut(s) 1043, 1053, 1621
BstSCI CCNGG 5 cut(s) 93, 123, 172, 1516, 1779
BstSFI CTRYAG 3 cut(s) 386, 1583, 1653
BstSLI GKGCMC 1 cut(s) 1442
BstV1I GCAGC 3 cut(s) 530, 1549, 1675
BstV2I GAAGAC 1 cut(s) 1108
BstX2I RGATCY 1 cut(s) 1639
BstXI CCANNNNNNTGG 2 cut(s) 131, 995
BstYI RGATCY 1 cut(s) 1639
Bsu15I ATCGAT 1 cut(s) 148
Bsu36I CCTNAGG 1 cut(s) 311
BsuI GTATCC 1 cut(s) 467
BsuRI GGCC 4 cut(s) 70, 308, 489, 507
BsuTUI ATCGAT 1 cut(s) 148
BtgI CCRYGG 1 cut(s) 820
BtsCI GGATG 8 cut(s) 35, 133, 901, 930, 1289, 1391, 1418, 1459
BtsIMutI CAGTG 5 cut(s) 71, 234, 1038, 1234, 1744
Cac8I GCNNGC 3 cut(s) 1041, 1619, 1772
CfoI GCGC 3 cut(s) 80, 186, 1652
Cfr13I GGNCC 4 cut(s) 47, 307, 506, 579
ClaI ATCGAT 1 cut(s) 148
Csp6I GTAC 3 cut(s) 832, 1078, 1217
CviAII CATG 4 cut(s) 1040, 1050, 1423, 1618
CviQI GTAC 3 cut(s) 832, 1078, 1217
DdeI CTNAG 6 cut(s) 311, 1014, 1044, 1172, 1490, 1713
DpnI GATC 6 cut(s) 151, 816, 1541, 1578, 1602, 1641
DpnII GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
DriI GACNNNNNGTC 1 cut(s) 168
EaeI YGGCCR 1 cut(s) 487
Eam1104I CTCTTC 7 cut(s) 110, 414, 438, 582, 639, 968, 1405
Eam1105I GACNNNNNGTC 1 cut(s) 168
EarI CTCTTC 7 cut(s) 110, 414, 438, 582, 639, 968, 1405
EciI GGCGGA 3 cut(s) 974, 1384, 1386
Ecl136II GAGCTC 1 cut(s) 428
Eco130I CCWWGG 2 cut(s) 977, 994
Eco24I GRGCYC 2 cut(s) 430, 1289
Eco32I GATATC 1 cut(s) 1411
Eco47I GGWCC 2 cut(s) 47, 579
Eco47III AGCGCT 1 cut(s) 1651
Eco53kI GAGCTC 1 cut(s) 428
Eco57I CTGAAG 2 cut(s) 606, 1589
Eco81I CCTNAGG 1 cut(s) 311
Eco88I CYCGRG 1 cut(s) 921
EcoICRI GAGCTC 1 cut(s) 428
EcoRI GAATTC 1 cut(s) 1531
EcoRII CCWGG 2 cut(s) 123, 1516
EcoRV GATATC 1 cut(s) 1411
EcoT14I CCWWGG 2 cut(s) 977, 994
EcoT22I ATGCAT 1 cut(s) 1055
EcoT38I GRGCYC 2 cut(s) 430, 1289
ErhI CCWWGG 2 cut(s) 977, 994
FaeI CATG 4 cut(s) 1043, 1053, 1426, 1621
FaqI GGGAC 3 cut(s) 11, 172, 1594
FatI CATG 4 cut(s) 1039, 1049, 1422, 1617
FbaI TGATCA 1 cut(s) 1576
FblI GTMKAC 1 cut(s) 1010
Fnu4HI GCNGC 4 cut(s) 519, 1563, 1689, 1698
FokI GGATG 8 cut(s) 22, 140, 908, 917, 1276, 1378, 1405, 1466
FriOI GRGCYC 2 cut(s) 430, 1289
Fsp4HI GCNGC 4 cut(s) 519, 1563, 1689, 1698
FspBI CTAG 3 cut(s) 774, 878, 1804
FspI TGCGCA 1 cut(s) 79
GlaI GCGC 3 cut(s) 79, 185, 1651
GluI GCNGC 4 cut(s) 519, 1563, 1689, 1698
GsuI CTGGAG 2 cut(s) 272, 444
HaeII RGCGCY 2 cut(s) 187, 1653
HaeIII GGCC 4 cut(s) 70, 308, 489, 507
HapII CCGG 5 cut(s) 94, 173, 187, 413, 1780
HhaI GCGC 3 cut(s) 80, 186, 1652
Hin1II CATG 4 cut(s) 1043, 1053, 1426, 1621
Hin6I GCGC 3 cut(s) 78, 184, 1650
HinP1I GCGC 3 cut(s) 78, 184, 1650
HindIII AAGCTT 2 cut(s) 1178, 1510
HinfI GANTC 9 cut(s) 274, 355, 368, 375, 512, 797, 919, 1553, 1628
HpaII CCGG 5 cut(s) 94, 173, 187, 413, 1780
HphI GGTGA 7 cut(s) 560, 572, 581, 809, 946, 1308, 1623
Hpy166II GTNNAC 4 cut(s) 1011, 1094, 1316, 1335
Hpy188III TCNNGA 8 cut(s) 102, 263, 372, 595, 923, 1406, 1625, 1787
Hpy8I GTNNAC 4 cut(s) 1011, 1094, 1316, 1335
HpyAV CCTTC 5 cut(s) 149, 372, 431, 614, 937
HpyCH4III ACNGT 9 cut(s) 25, 75, 238, 390, 401, 821, 940, 1033, 1587
HpyCH4IV ACGT 2 cut(s) 1122, 1678
HpyCH4V TGCA 5 cut(s) 232, 1053, 1226, 1468, 1565
HpyF10VI GCNNNNNNNGC 4 cut(s) 486, 1446, 1694, 1697
HpyF3I CTNAG 6 cut(s) 311, 1014, 1044, 1172, 1490, 1713
HpySE526I ACGT 2 cut(s) 1122, 1678
Hsp92II CATG 4 cut(s) 1043, 1053, 1426, 1621
HspAI GCGC 3 cut(s) 78, 184, 1650
Ksp22I TGATCA 1 cut(s) 1576
Kzo9I GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
LmnI GCTCC 8 cut(s) 253, 425, 723, 743, 899, 987, 1036, 1767
Lsp1109I GCAGC 3 cut(s) 530, 1549, 1675
LweI GCATC 3 cut(s) 44, 1192, 1400
MaeI CTAG 3 cut(s) 774, 878, 1804
MaeII ACGT 2 cut(s) 1122, 1678
MaeIII GTNAC 5 cut(s) 569, 1027, 1135, 1544, 1629
MalI GATC 6 cut(s) 151, 816, 1541, 1578, 1602, 1641
MboI GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
MboII GAAGA 9 cut(s) 127, 401, 455, 599, 626, 955, 1108, 1392, 1595
MfeI CAATTG 1 cut(s) 574
MflI RGATCY 1 cut(s) 1639
MhlI GDGCHC 3 cut(s) 430, 1289, 1442
MlsI TGGCCA 1 cut(s) 489
MluNI TGGCCA 1 cut(s) 489
MlyI GAGTC 3 cut(s) 349, 913, 1637
Mox20I TGGCCA 1 cut(s) 489
Mph1103I ATGCAT 1 cut(s) 1055
MroXI GAANNNNTTC 2 cut(s) 947, 1164
MscI TGGCCA 1 cut(s) 489
MseI TTAA 5 cut(s) 380, 395, 498, 663, 1508
MslI CAYNNNNRTG 2 cut(s) 126, 1004
Msp20I TGGCCA 1 cut(s) 489
MspI CCGG 5 cut(s) 94, 173, 187, 413, 1780
MspR9I CCNGG 5 cut(s) 95, 125, 174, 1518, 1781
MunI CAATTG 1 cut(s) 574
Mva1269I GAATGC 1 cut(s) 1160
MvaI CCWGG 2 cut(s) 125, 1518
MwoI GCNNNNNNNGC 4 cut(s) 486, 1446, 1694, 1697
NciI CCSGG 3 cut(s) 95, 174, 1781
NdeII GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
NlaIII CATG 4 cut(s) 1043, 1053, 1426, 1621
NlaIV GGNNCC 6 cut(s) 48, 255, 581, 725, 983, 1778
NmuCI GTSAC 4 cut(s) 569, 1027, 1544, 1629
NsbI TGCGCA 1 cut(s) 79
NsiI ATGCAT 1 cut(s) 1055
NspI RCATGY 3 cut(s) 1043, 1053, 1621
PaeI GCATGC 2 cut(s) 1043, 1621
PctI GAATGC 1 cut(s) 1160
PdmI GAANNNNTTC 2 cut(s) 947, 1164
PfeI GAWTC 6 cut(s) 274, 368, 375, 512, 797, 1553
PflMI CCANNNNNTGG 1 cut(s) 1213
PkrI GCNGC 4 cut(s) 520, 1564, 1690, 1699
PleI GAGTC 3 cut(s) 349, 913, 1636
PpsI GAGTC 3 cut(s) 349, 913, 1636
Psp124BI GAGCTC 1 cut(s) 430
Psp1406I AACGTT 2 cut(s) 1122, 1678
Psp6I CCWGG 2 cut(s) 123, 1516
PspGI CCWGG 2 cut(s) 123, 1516
PspN4I GGNNCC 6 cut(s) 48, 255, 581, 725, 983, 1778
PspPI GGNCC 4 cut(s) 47, 307, 506, 579
PsuI RGATCY 1 cut(s) 1639
RsaI GTAC 3 cut(s) 833, 1079, 1218
RsaNI GTAC 3 cut(s) 832, 1078, 1217
RseI CAYNNNNRTG 2 cut(s) 126, 1004
SacI GAGCTC 1 cut(s) 430
SaqAI TTAA 5 cut(s) 380, 395, 498, 663, 1508
SatI GCNGC 4 cut(s) 519, 1563, 1689, 1698
Sau3AI GATC 6 cut(s) 149, 814, 1539, 1576, 1600, 1639
Sau96I GGNCC 4 cut(s) 47, 307, 506, 579
SchI GAGTC 3 cut(s) 349, 913, 1637
ScrFI CCNGG 5 cut(s) 95, 125, 174, 1518, 1781
SduI GDGCHC 3 cut(s) 430, 1289, 1442
SfaNI GCATC 3 cut(s) 44, 1192, 1400
SfcI CTRYAG 3 cut(s) 386, 1583, 1653
SinI GGWCC 2 cut(s) 47, 579
SmiMI CAYNNNNRTG 2 cut(s) 126, 1004
SmlI CTYRAG 3 cut(s) 263, 542, 1745
SmoI CTYRAG 3 cut(s) 263, 542, 1745
SphI GCATGC 2 cut(s) 1043, 1621
SsiI CCGC 7 cut(s) 516, 934, 985, 1371, 1395, 1698, 1774
SspMI CTAG 3 cut(s) 774, 878, 1804
SstI GAGCTC 1 cut(s) 430
StyD4I CCNGG 5 cut(s) 93, 123, 172, 1516, 1779
StyI CCWWGG 2 cut(s) 977, 994
TaaI ACNGT 9 cut(s) 25, 75, 238, 390, 401, 821, 940, 1033, 1587
TaiI ACGT 2 cut(s) 1125, 1681
TaqI TCGA 5 cut(s) 19, 101, 148, 1682, 1786
TatI WGTACW 2 cut(s) 831, 1077
TauI GCSGC 1 cut(s) 1700
TfiI GAWTC 6 cut(s) 274, 368, 375, 512, 797, 1553
Tru1I TTAA 5 cut(s) 380, 395, 498, 663, 1508
Tru9I TTAA 5 cut(s) 380, 395, 498, 663, 1508
TscAI CASTG 5 cut(s) 78, 241, 1038, 1241, 1744
TseFI GTSAC 4 cut(s) 569, 1027, 1544, 1629
TseI GCWGC 3 cut(s) 518, 1562, 1688
Tsp45I GTSAC 4 cut(s) 569, 1027, 1544, 1629
TspDTI ATGAA 6 cut(s) 239, 347, 879, 955, 1289, 1407
TspRI CASTG 5 cut(s) 78, 241, 1038, 1241, 1744
Van91I CCANNNNNTGG 1 cut(s) 1213
VpaK11BI GGWCC 2 cut(s) 47, 579
XapI RAATTY 2 cut(s) 52, 1531
XceI RCATGY 3 cut(s) 1043, 1053, 1621
XcmI CCANNNNNNNNNTGG 1 cut(s) 1429
XmiI GTMKAC 1 cut(s) 1010
XmnI GAANNNNTTC 2 cut(s) 947, 1164
XspI CTAG 3 cut(s) 774, 878, 1804
Zsp2I ATGCAT 1 cut(s) 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.