Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0012698

Physical Location & Seq

Genomic Coordinates Reverse (-)

12339129 .. 12345298

Gene Structure 6170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG152800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGAAACGAAAACAGAGAGGTTGGTTCCGCATCCGCATCCGCATCAGGGTGATTTTTTTGCATCGAACGCAAACATGGACAGCATGGAGGTGGACGGTTCCGGCCCTTCAAAGACCTCCTACGCGCCTTATGTATCCGATGCGATGCGCCATTGGTTGAGGTCTCTTAAAGCTCAGGACCGCAAGAAGATATTGGCCTACGAGCAGAAGGAGGCGGAGATGTTGGCCCTCATGGAGAAGGAGGCGGGGATGTTGGCCCGCATGGAGACGGCGAGGTTGGCCCGCCTGGATACGGCGAGGGAGATGGAGACTGGCGGCCCTGCTGGTGGCGCGTTTGGAGTGACCTCTTTCACTAACTTCTTCCCCAAAGAACGAGCATCAAAGATGCTGCAAGCCTGGCCTATGCTGGAATCTTCCTTACAAGACTTTGGCATTTCAAGCTCTCTCAATAGCGCAAACAATTCCATCACCGTTTCAACAACCGCAAGGACTAAGGACGCATATGCTATTGACAAGGCCCAGTGTCTGCTTGAACTTTTGTCTGCAACTGATGTTCCGCCGTCCATGGCATTAGAAACATTCACTGGCAGTAGGCAGTACAGCCTCGTTAAGATCGGGGACATATGCTCAAAATACGGGCTCCAAAAGGAGGAATATCTTCAATGGTTGGAACGCCCCTTCCATTTTCTAGAGGTGCCTTCCACAGTGTATCCCTTTCATCTCTTTCTTAACGTAGACACAATTACTGCTGTGTCTGCCGTGGGCGATTCATCTACACTTCCTCGCCTCAGCCCTGGGGAGTATTTAGAAATTTTCATTACCAGTATTTTGCCTTCAATGGATGATATTGGGGACGAGATGGAGAAGTCTTGCCCTTTGATGAACGAAGGTGACCTGCTTGAAGCTTCCTCTCTATATTCCTTATTGGATGAAAAACAAGCAAAAAGGTTACAAGAAACTTGGCCTTTGGTGGAGTCTTTCTTAAAAGAGTATGGTATTTCATGCTCTCTGAATGTGGCTGAGCGTCACATGACATTCTCAACAACAAGAAGGACCACAGAACCATATATTAGTGACAAGGCTTGGTGTCTTCTTGAACTTTTGTCAACAACTCATGTTCCAGTGCCTACGGCAATAGATATAATAGATGGCAGCGTGAAACATGATTACATCAAGATTGGTTTTCAAGAAGGTGGGCTTTGCTCAATACATGGGATCAAGGAGGAGGAGTACTGTAAACGATGGAATTGTCTTCGCTGGTCACTACATGCACTTTCAGAACTGAAGGGTTGTGATCTGTTTCTTAATGCACACACTGTTACTGCTGTGGGGACTTCACGTGAAGTAAGTCGTTTGATCAGGTTGATTGTGGAAGACTGCATCATTTCCAATGTGTGTCCTGCAACTGCTGCCAGGAATGTGAGTGATAACTTATTCGAAACATACCGACCAACTGAAAACACAGAGGACCCACACGTCGCGCACATGAAGATGAAGTATGACGGCATGGCTGAGATCACCTGTTTCTGTAGGTTATACGCTAATGCGACCGTGTTGGAAAAAGATTGGCAGATGTTGCAGTCGTGTTTGAAGGATTACAGCAATATTTCATGCACACTGGTTGCGAACGACTGTGGCATGACGGTCTCAATAGCCAGAAGCATTGGGGATTCAGATATTGTTGGGAAGGGTTGGGATCTTCTTCGACTCATGGCAGCAACTAAAGTTCCGGTTCTTGTGGCAGAGATGATACTGAAAGGCACTCTGCATTGTGTCTTCATCAAGACTGGGTATGACGGTGGCCTTTGCTCAAAAATTGGGATCGAGATGCGTCAATTTTATCAAGTACTGCTGCCACGTCTTGAGTGCATCTTGAAGAATGCTGCAAGCCGAGCAGGTTGCAAGCTTTTGTTCAAGGATGAAACTATAATTGTGTTGGGGAAAGATCCTGCAGTCTTAAATTTGTTCGAGATGAGTGCACGGAAATGGCTGGAAGAACACAAGGATGATAAGGATGATTATGAAAGTCGCAAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00590 ko00790 ko00980 ko01100 ko05204 map00590 map00790 map00980 map01100 map05204

Pfam Domains

Protein Families

adh_short

Protein Analysis

679

Amino Acids

76.05

Weight (kDa)

5.39

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	116 - 182	5.6e-09	Krr1 KH1 domain
KH_KRR1_1st	PF17903	311 - 382	5.9e-09	Krr1 KH1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012698)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0195631 RchiOBHm_Chr7g0195641 RchiOBHm_Chr7g0211811
rosa_multiflora	Rmu_sc0003314.1_g000004 Rmu_sc0010418.1_g000006
rosa_roxburghii	Rroxscaffold_3G00260270 Rroxscaffold_4G00308620
rosa_rugosa	Rorug07G0025200 Rorug07G0025300
rosa_samantha	Rh4AG083700 Rh4CG090800 Rh7AG152800 Rh7BG154300 Rh7CG158000 Rh7CG158100 Rh7CG158200 Rh7DG153800
rosa_wichuraiana	Rw7G013060 Rw7G013070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1475
Acc36I	ACCTGC	2 cut(s)	903, 1886
AccB1I	GGYRCC	1 cut(s)	694
AccI	GTMKAC	1 cut(s)	735
AccII	CGCG	3 cut(s)	125, 332, 1481
AclWI	GGATC	4 cut(s)	1223, 1704, 1829, 1940
AcsI	RAATTY	2 cut(s)	810, 1960
AcuI	CTGAAG	1 cut(s)	1304
AcvI	CACGTG	1 cut(s)	1340
AfaI	GTAC	3 cut(s)	599, 1232, 1848
AfiI	CCNNNNNNNGG	4 cut(s)	47, 292, 326, 649
AflIII	ACRYGT	1 cut(s)	1474
AjiI	CACGTC	2 cut(s)	1477, 1859
AjnI	CCWGG	4 cut(s)	285, 395, 793, 1412
AloI	GAACNNNNNNTCC	2 cut(s)	663, 695
AluBI	AGCT	4 cut(s)	173, 441, 905, 1906
AluI	AGCT	4 cut(s)	173, 441, 905, 1906
Alw21I	GWGCWC	1 cut(s)	1981
Alw26I	GTCTC	4 cut(s)	168, 260, 302, 1651
Alw44I	GTGCAC	1 cut(s)	1977
AlwI	GGATC	4 cut(s)	1223, 1704, 1829, 1940
AlwNI	CAGNNNCTG	1 cut(s)	526
ApaLI	GTGCAC	1 cut(s)	1977
ApeKI	GCWGC	6 cut(s)	388, 1152, 1409, 1715, 1852, 1883
ApoI	RAATTY	2 cut(s)	810, 1960
Asp700I	GAANNNNTTC	1 cut(s)	657
AspLEI	GCGC	5 cut(s)	127, 150, 332, 455, 1483
AspS9I	GGNCC	9 cut(s)	104, 178, 226, 256, 280, 317, 517, 1053, 1468
AsuHPI	GGTGA	4 cut(s)	62, 460, 902, 1510
AsuII	TTCGAA	1 cut(s)	1437
AvaII	GGWCC	3 cut(s)	178, 1053, 1468
BaeGI	GKGCMC	1 cut(s)	1981
BanI	GGYRCC	1 cut(s)	694
BanII	GRGCYC	1 cut(s)	642
BarI	GAAGNNNNNNTAC	2 cut(s)	817, 849
BbrPI	CACGTG	1 cut(s)	1340
BbsI	GAAGAC	4 cut(s)	1082, 1244, 1380, 1768
Bbv12I	GWGCWC	1 cut(s)	1981
BbvCI	CCTCAGC	1 cut(s)	788
BbvI	GCAGC	6 cut(s)	375, 1164, 1396, 1727, 1839, 1870
BccI	CCATC	5 cut(s)	298, 473, 853, 1142, 1236
BceAI	ACGGC	6 cut(s)	285, 309, 544, 743, 1146, 1519
BcgI	CGANNNNNNTGC	4 cut(s)	1881, 1915, 1958, 1992
BciT130I	CCWGG	4 cut(s)	287, 397, 795, 1414
BciVI	GTATCC	3 cut(s)	145, 283, 720
BclI	TGATCA	1 cut(s)	1356
BcoDI	GTCTC	4 cut(s)	168, 260, 302, 1651
BfaI	CTAG	1 cut(s)	689
BfmI	CTRYAG	2 cut(s)	1528, 1950
BfuAI	ACCTGC	2 cut(s)	903, 1886
BfuI	GTATCC	3 cut(s)	145, 283, 720
BisI	GCNGC	7 cut(s)	316, 389, 1153, 1410, 1716, 1853, 1884
BlpI	GCTNAGC	1 cut(s)	1020
BlsI	GCNGC	7 cut(s)	317, 390, 1154, 1411, 1717, 1854, 1885
BmcAI	AGTACT	2 cut(s)	1232, 1848
Bme1390I	CCNGG	4 cut(s)	287, 397, 795, 1414
Bme18I	GGWCC	3 cut(s)	178, 1053, 1468
BmgBI	CACGTC	2 cut(s)	1477, 1859
BmgT120I	GGNCC	9 cut(s)	104, 178, 226, 256, 280, 317, 517, 1053, 1468
BmiI	GGNNCC	5 cut(s)	27, 100, 641, 696, 1470
BmrFI	CCNGG	4 cut(s)	287, 397, 795, 1414
BmrI	ACTGGG	2 cut(s)	514, 1797
BmuI	ACTGGG	2 cut(s)	514, 1797
BpiI	GAAGAC	4 cut(s)	1082, 1244, 1380, 1768
Bpu10I	CCTNAGC	2 cut(s)	174, 788
Bpu1102I	GCTNAGC	1 cut(s)	1020
Bpu14I	TTCGAA	1 cut(s)	1437
BpuEI	CTTGAG	1 cut(s)	1883
BsaAI	YACGTR	1 cut(s)	1340
BsaI	GGTCTC	2 cut(s)	168, 1651
BsaJI	CCNNGG	4 cut(s)	564, 759, 793, 794
BsaWI	WCCGGW	1 cut(s)	1729
BsaXI	ACNNNNNCTCC	2 cut(s)	1214, 1244
Bsc4I	CCNNNNNNNGG	4 cut(s)	47, 292, 326, 649
Bse1I	ACTGG	7 cut(s)	316, 520, 589, 822, 1121, 1623, 1792
BseBI	CCWGG	4 cut(s)	287, 397, 795, 1414
BseDI	CCNNGG	4 cut(s)	564, 759, 793, 794
BseGI	GGATG	8 cut(s)	31, 37, 255, 847, 934, 1924, 2011, 2020
BseLI	CCNNNNNNNGG	4 cut(s)	47, 292, 326, 649
BseMII	CTCAG	4 cut(s)	188, 802, 1011, 1503
BseNI	ACTGG	7 cut(s)	316, 520, 589, 822, 1121, 1623, 1792
BseRI	GAGGAG	2 cut(s)	1238, 1241
BseSI	GKGCMC	1 cut(s)	1981
BseXI	GCAGC	6 cut(s)	375, 1164, 1396, 1727, 1839, 1870
Bsh1236I	CGCG	3 cut(s)	125, 332, 1481
Bsh1285I	CGRYCG	1 cut(s)	1551
BshNI	GGYRCC	1 cut(s)	694
BsiEI	CGRYCG	1 cut(s)	1551
BsiHKAI	GWGCWC	1 cut(s)	1981
BsiSI	CCGG	2 cut(s)	102, 1730
BslFI	GGGAC	3 cut(s)	632, 866, 1345
BslI	CCNNNNNNNGG	4 cut(s)	47, 292, 326, 649
BsmAI	GTCTC	4 cut(s)	168, 260, 302, 1651
BsmBI	CGTCTC	1 cut(s)	260
BsmFI	GGGAC	3 cut(s)	632, 866, 1345
BsmI	GAATGC	1 cut(s)	1885
Bso31I	GGTCTC	2 cut(s)	168, 1651
Bsp119I	TTCGAA	1 cut(s)	1437
Bsp1286I	GDGCHC	2 cut(s)	642, 1981
Bsp143I	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
Bsp1720I	GCTNAGC	1 cut(s)	1020
Bsp19I	CCATGG	1 cut(s)	564
BspCNI	CTCAG	4 cut(s)	187, 801, 1012, 1504
BspFNI	CGCG	3 cut(s)	125, 332, 1481
BspLI	GGNNCC	5 cut(s)	27, 100, 641, 696, 1470
BspMAI	CTGCAG	1 cut(s)	1954
BspMI	ACCTGC	2 cut(s)	903, 1886
BspPI	GGATC	4 cut(s)	1223, 1704, 1829, 1940
BspT104I	TTCGAA	1 cut(s)	1437
BspT107I	GGYRCC	1 cut(s)	694
BspTNI	GGTCTC	2 cut(s)	168, 1651
BsrI	ACTGG	7 cut(s)	316, 520, 589, 822, 1121, 1623, 1792
BssECI	CCNNGG	4 cut(s)	564, 759, 793, 794
BssMI	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
BssT1I	CCWWGG	1 cut(s)	564
Bst2UI	CCWGG	4 cut(s)	287, 397, 795, 1414
Bst4CI	ACNGT	9 cut(s)	98, 472, 706, 1235, 1318, 1552, 1634, 1645, 1799
BstAPI	GCANNNNNTGC	2 cut(s)	1409, 1576
BstBAI	YACGTR	1 cut(s)	1340
BstBI	TTCGAA	1 cut(s)	1437
BstC8I	GCNNGC	5 cut(s)	259, 283, 393, 1888, 1904
BstDEI	CTNAG	5 cut(s)	174, 492, 788, 1020, 1512
BstDSI	CCRYGG	2 cut(s)	564, 759
BstEII	GGTNACC	1 cut(s)	890
BstF5I	GGATG	8 cut(s)	31, 37, 255, 847, 934, 1924, 2011, 2020
BstFNI	CGCG	3 cut(s)	125, 332, 1481
BstHHI	GCGC	5 cut(s)	127, 150, 332, 455, 1483
BstKTI	GATC	8 cut(s)	615, 1218, 1297, 1359, 1518, 1699, 1824, 1948
BstMAI	GTCTC	4 cut(s)	168, 260, 302, 1651
BstMBI	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
BstMCI	CGRYCG	1 cut(s)	1551
BstMWI	GCNNNNNNNGC	9 cut(s)	68, 278, 329, 397, 438, 755, 1409, 1576, 1892
BstNI	CCWGG	4 cut(s)	287, 397, 795, 1414
BstNSI	RCATGY	1 cut(s)	1271
BstPI	GGTNACC	1 cut(s)	890
BstSCI	CCNGG	4 cut(s)	285, 395, 793, 1412
BstSFI	CTRYAG	2 cut(s)	1528, 1950
BstSLI	GKGCMC	1 cut(s)	1981
BstUI	CGCG	3 cut(s)	125, 332, 1481
BstV1I	GCAGC	6 cut(s)	375, 1164, 1396, 1727, 1839, 1870
BstV2I	GAAGAC	4 cut(s)	1082, 1244, 1380, 1768
BstX2I	RGATCY	2 cut(s)	1696, 1945
BstYI	RGATCY	2 cut(s)	1696, 1945
BsuI	GTATCC	3 cut(s)	145, 283, 720
BtgI	CCRYGG	2 cut(s)	564, 759
BtgZI	GCGATG	1 cut(s)	158
BtrI	CACGTC	2 cut(s)	1477, 1859
BtsCI	GGATG	8 cut(s)	31, 37, 255, 847, 934, 1924, 2011, 2020
BtsIMutI	CAGTG	6 cut(s)	527, 582, 711, 1128, 1314, 1616
BveI	ACCTGC	2 cut(s)	903, 1886
Cac8I	GCNNGC	5 cut(s)	259, 283, 393, 1888, 1904
CaiI	CAGNNNCTG	1 cut(s)	526
CfoI	GCGC	5 cut(s)	127, 150, 332, 455, 1483
Cfr13I	GGNCC	9 cut(s)	104, 178, 226, 256, 280, 317, 517, 1053, 1468
CseI	GACGC	3 cut(s)	506, 1013, 1820
Csp6I	GTAC	3 cut(s)	598, 1231, 1847
CviQI	GTAC	3 cut(s)	598, 1231, 1847
DdeI	CTNAG	5 cut(s)	174, 492, 788, 1020, 1512
DpnI	GATC	8 cut(s)	614, 1217, 1296, 1358, 1517, 1698, 1823, 1947
DpnII	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
DrdI	GACNNNNNNGTC	1 cut(s)	1475
DseDI	GACNNNNNNGTC	1 cut(s)	1475
EciI	GGCGGA	2 cut(s)	230, 546
Eco130I	CCWWGG	1 cut(s)	564
Eco24I	GRGCYC	1 cut(s)	642
Eco31I	GGTCTC	2 cut(s)	168, 1651
Eco47I	GGWCC	3 cut(s)	178, 1053, 1468
Eco57I	CTGAAG	1 cut(s)	1304
Eco72I	CACGTG	1 cut(s)	1340
Eco91I	GGTNACC	1 cut(s)	890
EcoO109I	RGGNCCY	1 cut(s)	1468
EcoO65I	GGTNACC	1 cut(s)	890
EcoRII	CCWGG	4 cut(s)	285, 395, 793, 1412
EcoT14I	CCWWGG	1 cut(s)	564
EcoT38I	GRGCYC	1 cut(s)	642
ErhI	CCWWGG	1 cut(s)	564
Esp3I	CGTCTC	1 cut(s)	260
FalI	AAGNNNNNCTT	2 cut(s)	1182, 1214
FaqI	GGGAC	3 cut(s)	632, 866, 1345
FauI	CCCGC	3 cut(s)	238, 266, 290
FauNDI	CATATG	2 cut(s)	502, 623
FbaI	TGATCA	1 cut(s)	1356
FblI	GTMKAC	1 cut(s)	735
Fnu4HI	GCNGC	7 cut(s)	316, 389, 1153, 1410, 1716, 1853, 1884
FokI	GGATG	8 cut(s)	18, 24, 262, 854, 941, 1931, 2018, 2027
FriOI	GRGCYC	1 cut(s)	642
Fsp4HI	GCNGC	7 cut(s)	316, 389, 1153, 1410, 1716, 1853, 1884
FspBI	CTAG	1 cut(s)	689
GlaI	GCGC	5 cut(s)	126, 149, 331, 454, 1482
GluI	GCNGC	7 cut(s)	316, 389, 1153, 1410, 1716, 1853, 1884
HapII	CCGG	2 cut(s)	102, 1730
HgaI	GACGC	3 cut(s)	506, 1013, 1820
HhaI	GCGC	5 cut(s)	127, 150, 332, 455, 1483
Hin6I	GCGC	5 cut(s)	125, 148, 330, 453, 1481
HinP1I	GCGC	5 cut(s)	125, 148, 330, 453, 1481
HincII	GTYRAC	1 cut(s)	1107
HindII	GTYRAC	1 cut(s)	1107
HindIII	AAGCTT	2 cut(s)	903, 1904
HinfI	GANTC	5 cut(s)	410, 767, 974, 1670, 1707
HpaII	CCGG	2 cut(s)	102, 1730
HphI	GGTGA	4 cut(s)	62, 460, 902, 1510
Hpy166II	GTNNAC	5 cut(s)	94, 736, 1107, 1238, 1979
Hpy188I	TCNGA	4 cut(s)	139, 1011, 1279, 1675
Hpy8I	GTNNAC	5 cut(s)	94, 736, 1107, 1238, 1979
Hpy99I	CGWCG	1 cut(s)	1481
HpyCH4III	ACNGT	9 cut(s)	98, 472, 706, 1235, 1318, 1552, 1634, 1645, 1799
HpyCH4IV	ACGT	4 cut(s)	732, 1339, 1476, 1858
HpyF10VI	GCNNNNNNNGC	9 cut(s)	68, 278, 329, 397, 438, 755, 1409, 1576, 1892
HpyF3I	CTNAG	5 cut(s)	174, 492, 788, 1020, 1512
HpySE526I	ACGT	4 cut(s)	732, 1339, 1476, 1858
HspAI	GCGC	5 cut(s)	125, 148, 330, 453, 1481
Ksp22I	TGATCA	1 cut(s)	1356
Kzo9I	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
LmnI	GCTCC	1 cut(s)	645
Lsp1109I	GCAGC	6 cut(s)	375, 1164, 1396, 1727, 1839, 1870
MaeI	CTAG	1 cut(s)	689
MaeII	ACGT	4 cut(s)	732, 1339, 1476, 1858
MaeIII	GTNAC	7 cut(s)	340, 890, 948, 1025, 1073, 1260, 1318
MalI	GATC	8 cut(s)	614, 1217, 1296, 1358, 1517, 1698, 1823, 1947
MboI	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
MflI	RGATCY	2 cut(s)	1696, 1945
MhlI	GDGCHC	2 cut(s)	642, 1981
MluCI	AATT	8 cut(s)	460, 741, 810, 1246, 1815, 1835, 1929, 1960
MlyI	GAGTC	2 cut(s)	983, 1701
MmeI	TCCRAC	2 cut(s)	648, 1536
MroXI	GAANNNNTTC	1 cut(s)	657
MseI	TTAA	6 cut(s)	168, 609, 729, 983, 1305, 1958
MslI	CAYNNNNRTG	5 cut(s)	48, 89, 1490, 1984, 2004
MspI	CCGG	2 cut(s)	102, 1730
MspR9I	CCNGG	4 cut(s)	287, 397, 795, 1414
Mva1269I	GAATGC	1 cut(s)	1885
MvaI	CCWGG	4 cut(s)	287, 397, 795, 1414
MvnI	CGCG	3 cut(s)	125, 332, 1481
MwoI	GCNNNNNNNGC	9 cut(s)	68, 278, 329, 397, 438, 755, 1409, 1576, 1892
NcoI	CCATGG	1 cut(s)	564
NdeI	CATATG	2 cut(s)	502, 623
NdeII	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
NlaIV	GGNNCC	5 cut(s)	27, 100, 641, 696, 1470
NmeAIII	GCCGAG	1 cut(s)	1916
NmuCI	GTSAC	5 cut(s)	340, 890, 1025, 1073, 1260
NspI	RCATGY	1 cut(s)	1271
NspV	TTCGAA	1 cut(s)	1437
PasI	CCCWGGG	1 cut(s)	794
PctI	GAATGC	1 cut(s)	1885
PdmI	GAANNNNTTC	1 cut(s)	657
PfeI	GAWTC	3 cut(s)	410, 767, 1670
PkrI	GCNGC	7 cut(s)	317, 390, 1154, 1411, 1717, 1854, 1885
PleI	GAGTC	2 cut(s)	982, 1701
PmaCI	CACGTG	1 cut(s)	1340
PmlI	CACGTG	1 cut(s)	1340
PpsI	GAGTC	2 cut(s)	982, 1701
Ppu21I	YACGTR	1 cut(s)	1340
PpuMI	RGGWCCY	1 cut(s)	1468
Psp5II	RGGWCCY	1 cut(s)	1468
Psp6I	CCWGG	4 cut(s)	285, 395, 793, 1412
PspCI	CACGTG	1 cut(s)	1340
PspEI	GGTNACC	1 cut(s)	890
PspGI	CCWGG	4 cut(s)	285, 395, 793, 1412
PspN4I	GGNNCC	5 cut(s)	27, 100, 641, 696, 1470
PspPI	GGNCC	9 cut(s)	104, 178, 226, 256, 280, 317, 517, 1053, 1468
PspPPI	RGGWCCY	1 cut(s)	1468
PstI	CTGCAG	1 cut(s)	1954
PstNI	CAGNNNCTG	1 cut(s)	526
PsuI	RGATCY	2 cut(s)	1696, 1945
RsaI	GTAC	3 cut(s)	599, 1232, 1848
RsaNI	GTAC	3 cut(s)	598, 1231, 1847
RseI	CAYNNNNRTG	5 cut(s)	48, 89, 1490, 1984, 2004
SaqAI	TTAA	6 cut(s)	168, 609, 729, 983, 1305, 1958
SatI	GCNGC	7 cut(s)	316, 389, 1153, 1410, 1716, 1853, 1884
Sau3AI	GATC	8 cut(s)	612, 1215, 1294, 1356, 1515, 1696, 1821, 1945
Sau96I	GGNCC	9 cut(s)	104, 178, 226, 256, 280, 317, 517, 1053, 1468
ScaI	AGTACT	2 cut(s)	1232, 1848
SchI	GAGTC	2 cut(s)	983, 1701
ScrFI	CCNGG	4 cut(s)	287, 397, 795, 1414
SduI	GDGCHC	2 cut(s)	642, 1981
SfcI	CTRYAG	2 cut(s)	1528, 1950
SfuI	TTCGAA	1 cut(s)	1437
SinI	GGWCC	3 cut(s)	178, 1053, 1468
SmiMI	CAYNNNNRTG	5 cut(s)	48, 89, 1490, 1984, 2004
SmlI	CTYRAG	1 cut(s)	1862
SmoI	CTYRAG	1 cut(s)	1862
Sse9I	AATT	8 cut(s)	460, 741, 810, 1246, 1815, 1835, 1929, 1960
SspI	AATATT	1 cut(s)	1606
SspMI	CTAG	1 cut(s)	689
StyD4I	CCNGG	4 cut(s)	285, 395, 793, 1412
StyI	CCWWGG	1 cut(s)	564
TaaI	ACNGT	9 cut(s)	98, 472, 706, 1235, 1318, 1552, 1634, 1645, 1799
TaiI	ACGT	4 cut(s)	735, 1342, 1479, 1861
TaqI	TCGA	5 cut(s)	65, 1437, 1705, 1824, 1968
TasI	AATT	8 cut(s)	460, 741, 810, 1246, 1815, 1835, 1929, 1960
TatI	WGTACW	3 cut(s)	597, 1230, 1846
TauI	GCSGC	1 cut(s)	318
TfiI	GAWTC	3 cut(s)	410, 767, 1670
Tru1I	TTAA	6 cut(s)	168, 609, 729, 983, 1305, 1958
Tru9I	TTAA	6 cut(s)	168, 609, 729, 983, 1305, 1958
TscAI	CASTG	6 cut(s)	527, 589, 711, 1128, 1321, 1623
TseFI	GTSAC	5 cut(s)	340, 890, 1025, 1073, 1260
TseI	GCWGC	6 cut(s)	388, 1152, 1409, 1715, 1852, 1883
Tsp45I	GTSAC	5 cut(s)	340, 890, 1025, 1073, 1260
TspGWI	ACGGA	1 cut(s)	1996
TspRI	CASTG	6 cut(s)	527, 589, 711, 1128, 1321, 1623
VneI	GTGCAC	1 cut(s)	1977
VpaK11BI	GGWCC	3 cut(s)	178, 1053, 1468
XapI	RAATTY	2 cut(s)	810, 1960
XbaI	TCTAGA	1 cut(s)	688
XceI	RCATGY	1 cut(s)	1271
XmiI	GTMKAC	1 cut(s)	735
XmnI	GAANNNNTTC	1 cut(s)	657
XspI	CTAG	1 cut(s)	689
ZrmI	AGTACT	2 cut(s)	1232, 1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.