RchiOBHm_Chr7g0217661

Apoptosis inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004487
Physical Location & Seq
Reverse (-)
35574028 .. 35580772
6745 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19479

Sequence Viewer

Length: 978 bp
ATGTGCAAGCTATTCGGGGGCTTTCCCCTTTTCTGCAAGGACAACGTCTCGAAGATTGTAGACATTCTTGTGCAACTCCTTCAAGCTGATGAGTTTGTGGAGTGTGATGCTGTGCGTAAGGCTCTTATGGCCCTTTTGAGGCAGGATGTGAAAGCTTCTTTGAAAGCCTTGTTCAAGCACATTGGAAGCGTTGATGAACCAAGCCAAGACGATGTTATTCTTGAGAAATTCCTAAGCTTTATCAGAGATAAGGTATTTCCTACTAAAGCTGAACTTTTGAAGCCTCAGGAGGACATGGAGAGGCATATTACTGACTTGATAAAAAAGAGTTTAGAAGATGTAACTGGAGCAGAATTTAGAATGTTTTTGGACCTTTTAAAAGGTTTGAGCATCTTTGGGGATAAAGCTCCGAAAGAACGGAGGGTAGAACTTGTTGGAATTATTGAAGGACAGGCTGATTTAGATGCTCAATTCGATGTTTCAGACGCAGACCATATCGCCAGGTTGATATCTTGCCTATTTATGGCTCTGCCATTTATTGTGAGAGGTGCACCAAGCAGCAAATTCCTCAACTATCTGAACAAACACATCCTTCCTGTTTCGGATAAGTTTTTTTTGGCTAGATTTGCTGAAGGCCCTTGCAGAAGTGGCACCATTCACCACACCACAAGATTCACGTCAGATTCTACCTTCTGTGGTTCAGCTGTTAAAGAAAAACATGCCTCGGAGAAAGATGGAGAGGAGTTCAACTTCACTTATGTCGAATGCTTGTTGTACGCATTTCACCATCTTGCTCACAAGGTTCCAAATGCTACCAACAGTTTATGCGGCTACAAGATGGTAACTGGACAACCATCAGATATGCTTGGTGAGGACTTTACAGAGCAGTATATATGTTCATGTTATTGTCATTTCAAAGAAGCGTCTGCGAAGATTGAAGTCCCTAGGAAACATGTTGCTGTTTCAATTCCTAGTTAA

Protein Analysis

325

Amino Acids

36.54

Weight (kDa)

6.07

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
API5 PF05918 7 - 297 1.1e-109 Apoptosis inhibitory protein 5 (API5)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 650
AccI GTMKAC 1 cut(s) 60
AciI CCGC 1 cut(s) 828
AcsI RAATTY 3 cut(s) 227, 353, 563
AcuI CTGAAG 1 cut(s) 651
AfaI GTAC 1 cut(s) 776
AfiI CCNNNNNNNGG 2 cut(s) 138, 523
AflIII ACRYGT 1 cut(s) 952
AgsI TTSAA 9 cut(s) 83, 163, 175, 280, 446, 748, 916, 938, 966
AjiI CACGTC 1 cut(s) 678
AjnI CCWGG 1 cut(s) 500
AluBI AGCT 7 cut(s) 10, 86, 155, 237, 269, 407, 704
AluI AGCT 7 cut(s) 10, 86, 155, 237, 269, 407, 704
Alw21I GWGCWC 1 cut(s) 553
Alw26I GTCTC 1 cut(s) 52
Alw44I GTGCAC 1 cut(s) 549
AoxI GGCC 2 cut(s) 129, 634
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 1 cut(s) 558
ApoI RAATTY 3 cut(s) 227, 353, 563
AspA2I CCTAGG 1 cut(s) 944
AspS9I GGNCC 3 cut(s) 130, 370, 635
AsuHPI GGTGA 3 cut(s) 650, 776, 881
AvaII GGWCC 1 cut(s) 370
AvrII CCTAGG 1 cut(s) 944
AxyI CCTNAGG 1 cut(s) 285
BaeGI GKGCMC 1 cut(s) 553
BanI GGYRCC 1 cut(s) 650
Bbv12I GWGCWC 1 cut(s) 553
BbvI GCAGC 1 cut(s) 570
BccI CCATC 4 cut(s) 728, 795, 832, 862
BcgI CGANNNNNNTGC 1 cut(s) 29
BciT130I CCWGG 1 cut(s) 502
BcoDI GTCTC 1 cut(s) 52
BfaI CTAG 3 cut(s) 621, 945, 972
BisI GCNGC 2 cut(s) 559, 829
BlnI CCTAGG 1 cut(s) 944
BlsI GCNGC 2 cut(s) 560, 830
Bme1390I CCNGG 1 cut(s) 502
Bme18I GGWCC 1 cut(s) 370
BmgBI CACGTC 1 cut(s) 678
BmgT120I GGNCC 3 cut(s) 130, 370, 635
BmiI GGNNCC 2 cut(s) 652, 804
BmrFI CCNGG 1 cut(s) 502
BmsI GCATC 3 cut(s) 97, 399, 454
BpmI CTGGAG 1 cut(s) 366
Bpu10I CCTNAGC 1 cut(s) 233
BpuEI CTTGAG 1 cut(s) 242
BsaJI CCNNGG 2 cut(s) 723, 944
Bsc4I CCNNNNNNNGG 2 cut(s) 138, 523
Bse1I ACTGG 2 cut(s) 349, 850
Bse21I CCTNAGG 1 cut(s) 285
BseBI CCWGG 1 cut(s) 502
BseDI CCNNGG 2 cut(s) 723, 944
BseGI GGATG 2 cut(s) 151, 588
BseLI CCNNNNNNNGG 2 cut(s) 138, 523
BseMII CTCAG 1 cut(s) 299
BseNI ACTGG 2 cut(s) 349, 850
BseRI GAGGAG 1 cut(s) 755
BseSI GKGCMC 1 cut(s) 553
BseXI GCAGC 1 cut(s) 570
BshFI GGCC 2 cut(s) 131, 636
BshNI GGYRCC 1 cut(s) 650
BsiHKAI GWGCWC 1 cut(s) 553
BslFI GGGAC 1 cut(s) 926
BslI CCNNNNNNNGG 2 cut(s) 138, 523
BsmAI GTCTC 1 cut(s) 52
BsmBI CGTCTC 1 cut(s) 52
BsmFI GGGAC 1 cut(s) 926
BsmI GAATGC 1 cut(s) 770
BsnI GGCC 2 cut(s) 131, 636
Bsp1286I GDGCHC 1 cut(s) 553
BspACI CCGC 1 cut(s) 828
BspANI GGCC 2 cut(s) 131, 636
BspCNI CTCAG 1 cut(s) 298
BspLI GGNNCC 2 cut(s) 652, 804
BspT107I GGYRCC 1 cut(s) 650
BsrI ACTGG 2 cut(s) 349, 850
BssECI CCNNGG 2 cut(s) 723, 944
BssT1I CCWWGG 1 cut(s) 944
Bst2UI CCWGG 1 cut(s) 502
Bst4CI ACNGT 1 cut(s) 821
BstC8I GCNNGC 1 cut(s) 8
BstDEI CTNAG 2 cut(s) 233, 285
BstF5I GGATG 2 cut(s) 151, 588
BstMAI GTCTC 1 cut(s) 52
BstMWI GCNNNNNNNGC 3 cut(s) 128, 626, 648
BstNI CCWGG 1 cut(s) 502
BstNSI RCATGY 2 cut(s) 722, 956
BstSCI CCNGG 1 cut(s) 500
BstSLI GKGCMC 1 cut(s) 553
BstV1I GCAGC 1 cut(s) 570
Bsu36I CCTNAGG 1 cut(s) 285
BsuRI GGCC 2 cut(s) 131, 636
BtrI CACGTC 1 cut(s) 678
BtsCI GGATG 2 cut(s) 151, 588
Cac8I GCNNGC 1 cut(s) 8
Cfr13I GGNCC 3 cut(s) 130, 370, 635
CseI GACGC 2 cut(s) 494, 912
Csp6I GTAC 1 cut(s) 775
CviAII CATG 4 cut(s) 295, 719, 900, 953
CviQI GTAC 1 cut(s) 775
DdeI CTNAG 2 cut(s) 233, 285
DraI TTTAAA 1 cut(s) 378
Eco130I CCWWGG 1 cut(s) 944
Eco32I GATATC 1 cut(s) 510
Eco47I GGWCC 1 cut(s) 370
Eco57I CTGAAG 1 cut(s) 651
Eco81I CCTNAGG 1 cut(s) 285
EcoO109I RGGNCCY 1 cut(s) 635
EcoRII CCWGG 1 cut(s) 500
EcoRV GATATC 1 cut(s) 510
EcoT14I CCWWGG 1 cut(s) 944
ErhI CCWWGG 1 cut(s) 944
Esp3I CGTCTC 1 cut(s) 52
FaeI CATG 4 cut(s) 298, 722, 903, 956
FalI AAGNNNNNCTT 2 cut(s) 258, 290
FaqI GGGAC 1 cut(s) 926
FatI CATG 4 cut(s) 294, 718, 899, 952
FblI GTMKAC 1 cut(s) 60
Fnu4HI GCNGC 2 cut(s) 559, 829
FokI GGATG 2 cut(s) 158, 575
Fsp4HI GCNGC 2 cut(s) 559, 829
FspBI CTAG 3 cut(s) 621, 945, 972
GluI GCNGC 2 cut(s) 559, 829
GsuI CTGGAG 1 cut(s) 366
HaeIII GGCC 2 cut(s) 131, 636
HgaI GACGC 2 cut(s) 494, 912
Hin1II CATG 4 cut(s) 298, 722, 903, 956
HindIII AAGCTT 2 cut(s) 153, 235
HinfI GANTC 2 cut(s) 672, 683
HphI GGTGA 3 cut(s) 650, 776, 881
Hpy166II GTNNAC 2 cut(s) 61, 551
Hpy188I TCNGA 8 cut(s) 245, 411, 484, 579, 604, 682, 727, 859
Hpy188III TCNNGA 3 cut(s) 49, 221, 287
Hpy8I GTNNAC 2 cut(s) 61, 551
HpyAV CCTTC 5 cut(s) 89, 440, 602, 626, 700
HpyCH4III ACNGT 1 cut(s) 821
HpyCH4IV ACGT 2 cut(s) 45, 677
HpyCH4V TGCA 5 cut(s) 6, 36, 73, 551, 642
HpyF10VI GCNNNNNNNGC 3 cut(s) 128, 626, 648
HpyF3I CTNAG 2 cut(s) 233, 285
HpySE526I ACGT 2 cut(s) 45, 677
Hsp92II CATG 4 cut(s) 298, 722, 903, 956
LmnI GCTCC 2 cut(s) 347, 412
LpnPI CCDG 8 cut(s) 128, 272, 330, 437, 487, 514, 609, 831
Lsp1109I GCAGC 1 cut(s) 570
LweI GCATC 3 cut(s) 97, 399, 454
MaeI CTAG 3 cut(s) 621, 945, 972
MaeII ACGT 2 cut(s) 45, 677
MaeIII GTNAC 2 cut(s) 340, 841
MboII GAAGA 3 cut(s) 64, 347, 943
MhlI GDGCHC 1 cut(s) 553
MluCI AATT 6 cut(s) 227, 353, 438, 470, 563, 966
MmeI TCCRAC 1 cut(s) 415
MseI TTAA 3 cut(s) 377, 708, 976
MslI CAYNNNNRTG 1 cut(s) 68
MspA1I CMGCKG 1 cut(s) 704
MspR9I CCNGG 1 cut(s) 502
Mva1269I GAATGC 1 cut(s) 770
MvaI CCWGG 1 cut(s) 502
MwoI GCNNNNNNNGC 3 cut(s) 128, 626, 648
NlaIII CATG 4 cut(s) 298, 722, 903, 956
NlaIV GGNNCC 2 cut(s) 652, 804
NspI RCATGY 2 cut(s) 722, 956
PciI ACATGT 1 cut(s) 952
PctI GAATGC 1 cut(s) 770
PfeI GAWTC 2 cut(s) 672, 683
PflFI GACNNNGTC 1 cut(s) 44
PkrI GCNGC 2 cut(s) 560, 830
PscI ACATGT 1 cut(s) 952
Psp6I CCWGG 1 cut(s) 500
PspGI CCWGG 1 cut(s) 500
PspN4I GGNNCC 2 cut(s) 652, 804
PspPI GGNCC 3 cut(s) 130, 370, 635
PsyI GACNNNGTC 1 cut(s) 44
PvuII CAGCTG 1 cut(s) 704
RsaI GTAC 1 cut(s) 776
RsaNI GTAC 1 cut(s) 775
RseI CAYNNNNRTG 1 cut(s) 68
SaqAI TTAA 3 cut(s) 377, 708, 976
SatI GCNGC 2 cut(s) 559, 829
Sau96I GGNCC 3 cut(s) 130, 370, 635
ScrFI CCNGG 1 cut(s) 502
SduI GDGCHC 1 cut(s) 553
SfaNI GCATC 3 cut(s) 97, 399, 454
SinI GGWCC 1 cut(s) 370
SmiMI CAYNNNNRTG 1 cut(s) 68
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 6 cut(s) 227, 353, 438, 470, 563, 966
SsiI CCGC 1 cut(s) 828
SspMI CTAG 3 cut(s) 621, 945, 972
StyD4I CCNGG 1 cut(s) 500
StyI CCWWGG 1 cut(s) 944
TaaI ACNGT 1 cut(s) 821
TaiI ACGT 2 cut(s) 48, 680
TaqI TCGA 3 cut(s) 50, 474, 762
TasI AATT 6 cut(s) 227, 353, 438, 470, 563, 966
TauI GCSGC 1 cut(s) 831
TfiI GAWTC 2 cut(s) 672, 683
Tru1I TTAA 3 cut(s) 377, 708, 976
Tru9I TTAA 3 cut(s) 377, 708, 976
TseI GCWGC 1 cut(s) 558
TspDTI ATGAA 2 cut(s) 210, 888
TspGWI ACGGA 1 cut(s) 433
Tth111I GACNNNGTC 1 cut(s) 44
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 1 cut(s) 370
XapI RAATTY 3 cut(s) 227, 353, 563
XceI RCATGY 2 cut(s) 722, 956
XmaJI CCTAGG 1 cut(s) 944
XmiI GTMKAC 1 cut(s) 60
XspI CTAG 3 cut(s) 621, 945, 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.