RLG00000002451

Apoptosis inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0004487
Physical Location & Seq
Forward (+)
34381647 .. 34386680
5034 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002451

Sequence Viewer

Length: 1212 bp
ATGAATATTACGATTATTACTGCGTTTCACAAAACTGTCGCGTTTAAGGTAAATCCAAACCCCATCAAGAAGCTCTACGAGTTCGGCGAGCGACTCAATGAGTCCAAGGACAAATCCCAGAATGTCGAGGACTATCAGGGGATTATCAGTGCGGCAAAGACGAGCATGAAGGCCAAGCAGCTCGCTGCACAGCTTATTCCCAGGTTCTTCAAGTTCTTCCCCGGGCTTTCCTTGCCAGCTATAGATACTCATCTTGATTTGATTGAAGAAGAAGAGCTACCTGACTTCATAGTGCTAATAGGTGTTGCCTATCCGTACATGGTTCGAGTGCAAGCTATTCGGGGGCTTCCCTTTTTCTGCAAGGACAACCCTGAACACGTCTCAAAGATTGTAGACATTCTTGTGCAACTCCTTCAAGCTGATGAGTTTGTGGAGTGTGATGCTGTGCATAAGGCTCTTATGGCCCTTTTGAGTCAGGATGTGAAAGCTTCTTTGAGAGCCTTGCTCAAGCACATTGGAAGCGTTGATGAACCAAGCCAAGACGATGTTATTCTTGAGAAATTCCTAAGCTTTATCAGAGATAAGGTATTTCCTACTAAAGCTGAACTTTTGAAGCGTCAGGAGGAAATGGAGAGGCATATTACTGACTTGATAAAAAAAGTTCAATTGCGGAGTTTAGAAGATGTAACTGGAGCAGAATTTAGAATGTTTATGGACCTTTTAAAAGGTTTGAGCATCTTTGGGGATAAAGCTCCGAAAGAACGGAGGGTAGAACTTGTTGGAATTATTGAAGGACAGGCTGATTTAGATGCTCAATTCAATATAAGTTCTTGTATAACTGTTTTAGACGCAGACCATATCGACAGGTTGATATCTTGCCTATTTATGGCTCTGCCATTTATTGTGAGAGGCGCACCAAGCAGCAAATTCCTCAACTATCTGAACAAACACATCCTTCCTGTTTCGGATAAGCTTCCTGATGAAAAAAGGCTAGATTTGCTGAAGGCCCTTGCAGAAGTTGCACCATTCACCACACCACAAGATTCACGTCAGATTCTACCTTCTGTGGTTCAGCTGTTAAAGAAAAACATGCCTCGGAGAAAGACGGAGAGGAGTTCAACTTCACTTATGTCGAATGCTTGTTGTACACATTTCACCATCTTGCTCACAAGGTTCCAAATGCTACCAACAGTTTATGCGGCTACAAGATAG

Protein Analysis

404

Amino Acids

45.67

Weight (kDa)

7.63

Isoelectric Point (pI)

54.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
API5 PF05918 22 - 377 4.2e-137 Apoptosis inhibitory protein 5 (API5)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 393
AccII CGCG 1 cut(s) 41
AciI CCGC 3 cut(s) 152, 670, 1199
AcsI RAATTY 3 cut(s) 560, 698, 926
AcuI CTGAAG 1 cut(s) 1022
AfaI GTAC 2 cut(s) 317, 1147
AfiI CCNNNNNNNGG 1 cut(s) 886
AflIII ACRYGT 1 cut(s) 376
AgsI TTSAA 8 cut(s) 211, 266, 416, 613, 665, 791, 820, 1119
AjiI CACGTC 2 cut(s) 379, 1049
AjnI CCWGG 1 cut(s) 200
Alw26I GTCTC 1 cut(s) 385
Ama87I CYCGRG 1 cut(s) 221
AoxI GGCC 3 cut(s) 171, 462, 1005
ApeKI GCWGC 3 cut(s) 178, 185, 921
ApoI RAATTY 3 cut(s) 560, 698, 926
AspLEI GCGC 1 cut(s) 914
AspS9I GGNCC 3 cut(s) 463, 715, 1006
AsuC2I CCSGG 2 cut(s) 222, 223
AsuHPI GGTGA 2 cut(s) 1021, 1147
AvaI CYCGRG 1 cut(s) 221
AvaII GGWCC 1 cut(s) 715
BarI GAAGNNNNNNTAC 2 cut(s) 261, 293
BbvI GCAGC 3 cut(s) 172, 190, 933
BccI CCATC 2 cut(s) 71, 1166
BcgI CGANNNNNNTGC 2 cut(s) 320, 354
BciT130I CCWGG 1 cut(s) 202
BcnI CCSGG 2 cut(s) 222, 223
BcoDI GTCTC 1 cut(s) 385
BfaI CTAG 1 cut(s) 992
BfmI CTRYAG 1 cut(s) 240
BisI GCNGC 5 cut(s) 153, 179, 186, 922, 1200
BlsI GCNGC 5 cut(s) 154, 180, 187, 923, 1201
Bme1390I CCNGG 3 cut(s) 202, 222, 223
Bme18I GGWCC 1 cut(s) 715
BmeT110I CYCGRG 1 cut(s) 221
BmgBI CACGTC 2 cut(s) 379, 1049
BmgT120I GGNCC 3 cut(s) 463, 715, 1006
BmiI GGNNCC 1 cut(s) 1175
BmrFI CCNGG 3 cut(s) 202, 222, 223
BmsI GCATC 3 cut(s) 430, 744, 799
BplI GAGNNNNNCTC 2 cut(s) 489, 521
BpmI CTGGAG 1 cut(s) 711
Bpu10I CCTNAGC 1 cut(s) 566
BpuEI CTTGAG 2 cut(s) 491, 575
BpuMI CCSGG 2 cut(s) 222, 223
BsaBI GATNNNNATC 1 cut(s) 249
BsaJI CCNNGG 5 cut(s) 105, 200, 220, 221, 1094
Bsc4I CCNNNNNNNGG 1 cut(s) 886
Bse1I ACTGG 1 cut(s) 694
Bse8I GATNNNNATC 1 cut(s) 249
BseBI CCWGG 1 cut(s) 202
BseDI CCNNGG 5 cut(s) 105, 200, 220, 221, 1094
BseGI GGATG 2 cut(s) 484, 951
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 1 cut(s) 886
BseNI ACTGG 1 cut(s) 694
BseRI GAGGAG 1 cut(s) 1126
BseXI GCAGC 3 cut(s) 172, 190, 933
BsgI GTGCAG 1 cut(s) 171
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 3 cut(s) 173, 464, 1007
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 1 cut(s) 222
BslI CCNNNNNNNGG 1 cut(s) 886
BsmAI GTCTC 1 cut(s) 385
BsmBI CGTCTC 1 cut(s) 385
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 3 cut(s) 173, 464, 1007
BsoBI CYCGRG 1 cut(s) 221
Bsp1407I TGTACA 1 cut(s) 1145
BspACI CCGC 3 cut(s) 152, 670, 1199
BspANI GGCC 3 cut(s) 173, 464, 1007
BspFNI CGCG 1 cut(s) 41
BspLI GGNNCC 1 cut(s) 1175
BspQI GCTCTTC 1 cut(s) 267
BsrGI TGTACA 1 cut(s) 1145
BsrI ACTGG 1 cut(s) 694
BssECI CCNNGG 5 cut(s) 105, 200, 220, 221, 1094
BssT1I CCWWGG 1 cut(s) 105
Bst2UI CCWGG 1 cut(s) 202
Bst4CI ACNGT 3 cut(s) 37, 841, 1192
Bst6I CTCTTC 1 cut(s) 267
BstAPI GCANNNNNTGC 1 cut(s) 1019
BstAUI TGTACA 1 cut(s) 1145
BstC8I GCNNGC 4 cut(s) 89, 183, 237, 333
BstDEI CTNAG 1 cut(s) 566
BstF5I GGATG 2 cut(s) 484, 951
BstFNI CGCG 1 cut(s) 41
BstHHI GCGC 1 cut(s) 914
BstMAI GTCTC 1 cut(s) 385
BstMWI GCNNNNNNNGC 5 cut(s) 232, 461, 918, 997, 1019
BstNI CCWGG 1 cut(s) 202
BstNSI RCATGY 1 cut(s) 1093
BstSCI CCNGG 3 cut(s) 200, 220, 221
BstSFI CTRYAG 1 cut(s) 240
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 3 cut(s) 172, 190, 933
BsuRI GGCC 3 cut(s) 173, 464, 1007
BtrI CACGTC 2 cut(s) 379, 1049
BtsCI GGATG 2 cut(s) 484, 951
BtsIMutI CAGTG 1 cut(s) 154
Cac8I GCNNGC 4 cut(s) 89, 183, 237, 333
CfoI GCGC 1 cut(s) 914
Cfr13I GGNCC 3 cut(s) 463, 715, 1006
Cfr9I CCCGGG 1 cut(s) 221
CseI GACGC 2 cut(s) 605, 857
Csp6I GTAC 2 cut(s) 316, 1146
CviAII CATG 3 cut(s) 166, 319, 1090
CviQI GTAC 2 cut(s) 316, 1146
DdeI CTNAG 1 cut(s) 566
DraI TTTAAA 1 cut(s) 723
Eam1104I CTCTTC 1 cut(s) 267
EarI CTCTTC 1 cut(s) 267
Eco130I CCWWGG 1 cut(s) 105
Eco32I GATATC 1 cut(s) 873
Eco47I GGWCC 1 cut(s) 715
Eco57I CTGAAG 1 cut(s) 1022
Eco88I CYCGRG 1 cut(s) 221
EcoO109I RGGNCCY 1 cut(s) 1006
EcoRII CCWGG 1 cut(s) 200
EcoRV GATATC 1 cut(s) 873
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
Esp3I CGTCTC 1 cut(s) 385
FaeI CATG 3 cut(s) 169, 322, 1093
FalI AAGNNNNNCTT 2 cut(s) 591, 623
FatI CATG 3 cut(s) 165, 318, 1089
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 5 cut(s) 153, 179, 186, 922, 1200
FokI GGATG 2 cut(s) 491, 938
Fsp4HI GCNGC 5 cut(s) 153, 179, 186, 922, 1200
FspBI CTAG 1 cut(s) 992
GlaI GCGC 1 cut(s) 913
GluI GCNGC 5 cut(s) 153, 179, 186, 922, 1200
GsuI CTGGAG 1 cut(s) 711
HaeIII GGCC 3 cut(s) 173, 464, 1007
HapII CCGG 1 cut(s) 222
HgaI GACGC 2 cut(s) 605, 857
HhaI GCGC 1 cut(s) 914
Hin1II CATG 3 cut(s) 169, 322, 1093
Hin6I GCGC 1 cut(s) 912
HinP1I GCGC 1 cut(s) 912
HindIII AAGCTT 3 cut(s) 486, 568, 971
HinfI GANTC 5 cut(s) 93, 101, 472, 1043, 1054
HpaII CCGG 1 cut(s) 222
HphI GGTGA 2 cut(s) 1021, 1147
Hpy166II GTNNAC 2 cut(s) 394, 1148
Hpy188I TCNGA 6 cut(s) 578, 756, 942, 967, 1053, 1098
Hpy188III TCNNGA 6 cut(s) 67, 254, 476, 554, 620, 977
Hpy8I GTNNAC 2 cut(s) 394, 1148
HpyAV CCTTC 6 cut(s) 163, 422, 785, 965, 997, 1071
HpyCH4III ACNGT 3 cut(s) 37, 841, 1192
HpyCH4IV ACGT 2 cut(s) 378, 1048
HpyCH4V TGCA 7 cut(s) 188, 331, 360, 406, 448, 1013, 1022
HpyF10VI GCNNNNNNNGC 5 cut(s) 232, 461, 918, 997, 1019
HpyF3I CTNAG 1 cut(s) 566
HpySE526I ACGT 2 cut(s) 378, 1048
Hsp92II CATG 3 cut(s) 169, 322, 1093
HspAI GCGC 1 cut(s) 912
LguI GCTCTTC 1 cut(s) 267
LmnI GCTCC 2 cut(s) 692, 757
Lsp1109I GCAGC 3 cut(s) 172, 190, 933
LweI GCATC 3 cut(s) 430, 744, 799
MaeI CTAG 1 cut(s) 992
MaeII ACGT 2 cut(s) 378, 1048
MaeIII GTNAC 1 cut(s) 685
MboII GAAGA 6 cut(s) 199, 208, 278, 281, 284, 692
MfeI CAATTG 1 cut(s) 665
MluCI AATT 6 cut(s) 560, 665, 698, 783, 815, 926
MlyI GAGTC 3 cut(s) 87, 110, 481
MmeI TCCRAC 1 cut(s) 760
MnlI CCTC 8 cut(s) 121, 616, 627, 759, 902, 941, 1104, 1104
MseI TTAA 3 cut(s) 45, 722, 1079
MslI CAYNNNNRTG 1 cut(s) 401
MspA1I CMGCKG 1 cut(s) 1075
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 3 cut(s) 202, 222, 223
MunI CAATTG 1 cut(s) 665
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 1 cut(s) 202
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 5 cut(s) 232, 461, 918, 997, 1019
NciI CCSGG 2 cut(s) 222, 223
NlaIII CATG 3 cut(s) 169, 322, 1093
NlaIV GGNNCC 1 cut(s) 1175
NspI RCATGY 1 cut(s) 1093
PciSI GCTCTTC 1 cut(s) 267
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 1 cut(s) 1141
PfeI GAWTC 2 cut(s) 1043, 1054
PkrI GCNGC 5 cut(s) 154, 180, 187, 923, 1201
PleI GAGTC 3 cut(s) 87, 109, 480
PpsI GAGTC 3 cut(s) 87, 109, 480
Psp6I CCWGG 1 cut(s) 200
PspGI CCWGG 1 cut(s) 200
PspN4I GGNNCC 1 cut(s) 1175
PspPI GGNCC 3 cut(s) 463, 715, 1006
PvuII CAGCTG 1 cut(s) 1075
RsaI GTAC 2 cut(s) 317, 1147
RsaNI GTAC 2 cut(s) 316, 1146
RseI CAYNNNNRTG 1 cut(s) 401
SapI GCTCTTC 1 cut(s) 267
SaqAI TTAA 3 cut(s) 45, 722, 1079
SatI GCNGC 5 cut(s) 153, 179, 186, 922, 1200
Sau96I GGNCC 3 cut(s) 463, 715, 1006
SchI GAGTC 3 cut(s) 87, 110, 481
ScrFI CCNGG 3 cut(s) 202, 222, 223
SfaNI GCATC 3 cut(s) 430, 744, 799
SfcI CTRYAG 1 cut(s) 240
SinI GGWCC 1 cut(s) 715
SmaI CCCGGG 1 cut(s) 223
SmiMI CAYNNNNRTG 1 cut(s) 401
SmlI CTYRAG 2 cut(s) 506, 554
SmoI CTYRAG 2 cut(s) 506, 554
Sse9I AATT 6 cut(s) 560, 665, 698, 783, 815, 926
SsiI CCGC 3 cut(s) 152, 670, 1199
SspI AATATT 1 cut(s) 7
SspMI CTAG 1 cut(s) 992
StyD4I CCNGG 3 cut(s) 200, 220, 221
StyI CCWWGG 1 cut(s) 105
TaaI ACNGT 3 cut(s) 37, 841, 1192
TaiI ACGT 2 cut(s) 381, 1051
TaqI TCGA 4 cut(s) 126, 325, 861, 1133
TasI AATT 6 cut(s) 560, 665, 698, 783, 815, 926
TatI WGTACW 1 cut(s) 1145
TauI GCSGC 2 cut(s) 155, 1202
TfiI GAWTC 2 cut(s) 1043, 1054
Tru1I TTAA 3 cut(s) 45, 722, 1079
Tru9I TTAA 3 cut(s) 45, 722, 1079
TscAI CASTG 1 cut(s) 154
TseI GCWGC 3 cut(s) 178, 185, 921
TspDTI ATGAA 5 cut(s) 17, 182, 277, 543, 996
TspGWI ACGGA 3 cut(s) 303, 778, 1121
TspMI CCCGGG 1 cut(s) 221
TspRI CASTG 1 cut(s) 154
VpaK11BI GGWCC 1 cut(s) 715
XapI RAATTY 3 cut(s) 560, 698, 926
XceI RCATGY 1 cut(s) 1093
XmaI CCCGGG 1 cut(s) 221
XmiI GTMKAC 1 cut(s) 393
XspI CTAG 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.