Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005657

Physical Location & Seq

Genomic Coordinates Forward (+)

46013732 .. 46015713

Gene Structure 1982 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20071

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGAGGTCTTTGAAGCCTCTGCAACTCCGGCGACTCCTACTCCGCTGTGTCTCCACCTCTTCTTCTCCAACCCTCCAAACCCTCATCCCATTTCCCTCAACCAAACCCACCCACCATATCCCCAGCTCAATCACCACCACCTCTCACTTTCTCTCTCTACCCCATTTCTCTCTCCCCAAATCCTTCTCTTCTTCCTCATCTCCACCACCCCCCGACGAATCCCAACTAGCCCAATCCATCTCCTCCCACCTTCTCCAACACCAACCCGACTCCTCCTCCGATCCCTTCTCCGTCGCCCAAGCCCTCCAATCCACCTTCCCTCACGTCACCCCCACCCCTTCTCTGCTCCTCTCCGTCCTCAACCTCTCCGCCGAAGCCGGCCGCACCGTCCTAGGCTTCAACCAATGGCTCATCCAGAATCCTGATTTCCACCACACCGACAACACCCTCTCCTACTTTGTCGACTACTTCGGCAGAAGGAAGGATTTCAAGGCCGCCCATGACGTCATTCTCACTGCGCCGCGTGACGTTGCTGGGCCCAAGACCTTGGCCGCCTCCATTGACAGGCTGGTGAGAGCTGGGAGGCCGGTGCAGGCGGTCTCTTTCTTTGAGAAGATGGAGGAGGACTATGGGCTCAAGAGGGACAAGGCGGCGCTTCGATTGGTTGTGGAGAAGCTCTGCGAGAATGGGTTTGCCAGCAATGCTGAAAAGATGGTGAAAGGTTTGGTTAATGAGTTTTTCCCTGATGAGTATGTTTGCGATTTGCTTATTAAGGGGTGGTGTGTGGATGGGAAGCTTGACGAGGCTAGGAGATTGGCTGGGGAGATGTACAGGGGAGGGTTTGAGATTGGGACTAGTGCTTTCAATGCCATTCTTGATTGCGTGTGTAAGCTTTGCAGGAAAAAGGACCCCTTTCGCCTTCATTCCGAGGCTGAGCAGATTTTGGTGGATATGGACTTTCATGGGGTGCCGAGAAATGTGGAGACTTTCAATTTGCTGATTACTAATTTGTGTAAGATTAGGAAGACCGAGGATGCGCTGAATTTGTTTCATAGAATGGGGGAGTGGGGGTGTTCTCCAAACGAGACTACGTTTCTTGAATTGATCAGGAGCTTGTATCAGGCAGCTAGGGTTGGGGAGGGAGATGAAATGATTGATAGGATGAAATCAGCGGGGTTCGGGGAGGCTCTTGATAAGAAAGCCTATTTTGGGTTTCTGAAGATTTTGTGCGGCATTGAGAGGATTGATCATGCTTTGTCTGTTTTCAAGAAAATGAAGCAGGATGGATGTGAGCCCGGGGTCAAGAGTTATGATCTGCTGATGGGAAAATTGTATGCTCACAACCGTGCTGACAGAGCCACTGCCCTGTTTAATGAGGCCCAAAAGAAAGGGGTGCCTGTGACACACAAGACGTACCAGGTGGATCTGAAATACTTGAAGAAGCCAAAGGCTAAGAAGGAGAATATGAGGGAAACGCTTCCTGAGAAGATGGCAAGGAAGAGGAGACGTCTTAAGCAAATTCGGTTGAGCTTCGTAAAGAAGCCCAAAAAGGGGATGCGCCGAGCCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

523

Amino Acids

59.08

Weight (kDa)

9.43

Isoelectric Point (pI)

41.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	314 - 369	3.7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	326 - 372	1.4e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60960
fragaria_vesca	FvH4_5g29994 FvH4_5g29994 FvH4_5g29994 FvH4_7g15150
malus_domestica	MD06G1203500.v1.1 MD14G1214300.v1.1
prunus_persica	Prupe.5G207600_v2.0.a1
pyrus_communis	pycom06g18160 pycom14g17770 pycom16g18740
rosa_chinensis	RchiOBHm_Chr7g0224161 RchiOBHm_Chr7g0224171
rosa_laevigata	RLG00000001915
rosa_multiflora	Rmu_co8487915.1_g000001 Rmu_sc0008008.1_g000001 Rmu_sc0023501.1_g000005
rosa_roxburghii	Rroxscaffold_3G00235130 Rroxscaffold_3G00235140 Rroxscaffold_3G00235150
rosa_rugosa	Rorug07G0199800 Rorug07G0221500
rosa_samantha	Rh7AG365400 Rh7BG357100 Rh7CG384300 Rh7DG360200
rosa_wichuraiana	Rw7G030930 Rw7G030940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	507, 1510
AccB1I	GGYRCC	2 cut(s)	967, 1393
AccI	GTMKAC	1 cut(s)	462
AccII	CGCG	1 cut(s)	523
AclWI	GGATC	2 cut(s)	275, 1431
AcoI	YGGCCR	2 cut(s)	379, 549
AcsI	RAATTY	2 cut(s)	1042, 1518
AcuI	CTGAAG	1 cut(s)	1238
AcyI	GRCGYC	2 cut(s)	504, 1507
AfaI	GTAC	2 cut(s)	830, 1415
AfiI	CCNNNNNNNGG	4 cut(s)	564, 1209, 1550, 1551
AflII	CTTAAG	1 cut(s)	1511
AgsI	TTSAA	8 cut(s)	13, 400, 490, 865, 991, 1100, 1267, 1438
AhlI	ACTAGT	1 cut(s)	854
AjiI	CACGTC	1 cut(s)	325
AjnI	CCWGG	1 cut(s)	1416
AleI	CACNNNNGTG	1 cut(s)	1344
AluBI	AGCT	8 cut(s)	126, 578, 676, 796, 892, 1113, 1127, 1530
AluI	AGCT	8 cut(s)	126, 578, 676, 796, 892, 1113, 1127, 1530
Alw26I	GTCTC	5 cut(s)	55, 604, 977, 1079, 1498
AlwI	GGATC	2 cut(s)	275, 1431
Ama87I	CYCGRG	1 cut(s)	1295
AoxI	GGCC	6 cut(s)	379, 492, 536, 549, 584, 1377
ApaI	GGGCCC	1 cut(s)	540
ApeKI	GCWGC	1 cut(s)	1124
ApoI	RAATTY	2 cut(s)	1042, 1518
ArsI	GACNNNNNNTTYG	2 cut(s)	976, 1008
Asp700I	GAANNNNTTC	2 cut(s)	485, 1476
AspA2I	CCTAGG	1 cut(s)	391
AspLEI	GCGC	4 cut(s)	520, 655, 1039, 1560
AspS9I	GGNCC	4 cut(s)	536, 537, 907, 1378
AsuC2I	CCSGG	2 cut(s)	1296, 1297
AsuHPI	GGTGA	4 cut(s)	124, 319, 583, 727
AvaI	CYCGRG	1 cut(s)	1295
AvaII	GGWCC	1 cut(s)	907
AvrII	CCTAGG	1 cut(s)	391
BaeGI	GKGCMC	1 cut(s)	540
BanI	GGYRCC	2 cut(s)	967, 1393
BanII	GRGCYC	3 cut(s)	540, 636, 1296
BbsI	GAAGAC	1 cut(s)	1031
BbvI	GCAGC	1 cut(s)	1136
BccI	CCATC	7 cut(s)	245, 610, 706, 782, 1277, 1315, 1483
BciT130I	CCWGG	1 cut(s)	1418
BclI	TGATCA	2 cut(s)	1104, 1246
BcnI	CCSGG	2 cut(s)	1296, 1297
BcoDI	GTCTC	5 cut(s)	55, 604, 977, 1079, 1498
BcuI	ACTAGT	1 cut(s)	854
BfaI	CTAG	5 cut(s)	227, 392, 807, 855, 1128
BfoI	RGCGCY	1 cut(s)	656
BfrI	CTTAAG	1 cut(s)	1511
BisI	GCNGC	7 cut(s)	382, 495, 521, 552, 651, 1125, 1231
BlnI	CCTAGG	1 cut(s)	391
BlpI	GCTNAGC	1 cut(s)	933
BlsI	GCNGC	7 cut(s)	383, 496, 522, 553, 652, 1126, 1232
Bme1390I	CCNGG	3 cut(s)	1296, 1297, 1418
Bme18I	GGWCC	1 cut(s)	907
BmeT110I	CYCGRG	1 cut(s)	1295
BmgBI	CACGTC	1 cut(s)	325
BmgT120I	GGNCC	4 cut(s)	536, 537, 907, 1378
BmiI	GGNNCC	4 cut(s)	538, 909, 969, 1395
BmrFI	CCNGG	3 cut(s)	1296, 1297, 1418
BmsI	GCATC	2 cut(s)	1024, 1545
BpiI	GAAGAC	1 cut(s)	1031
Bpu1102I	GCTNAGC	1 cut(s)	933
BpuEI	CTTGAG	1 cut(s)	620
BpuMI	CCSGG	2 cut(s)	1296, 1297
BsaHI	GRCGYC	2 cut(s)	504, 1507
BsaI	GGTCTC	1 cut(s)	604
BsaJI	CCNNGG	6 cut(s)	391, 546, 927, 1029, 1295, 1296
BsaXI	ACNNNNNCTCC	8 cut(s)	24, 54, 260, 290, 434, 464, 1055, 1085
Bsc4I	CCNNNNNNNGG	4 cut(s)	564, 1209, 1550, 1551
Bse118I	RCCGGY	2 cut(s)	377, 586
Bse3DI	GCAATG	1 cut(s)	706
BseBI	CCWGG	1 cut(s)	1418
BseDI	CCNNGG	6 cut(s)	391, 546, 927, 1029, 1295, 1296
BseGI	GGATG	8 cut(s)	84, 411, 793, 1039, 1167, 1288, 1292, 1560
BseLI	CCNNNNNNNGG	4 cut(s)	564, 1209, 1550, 1551
BseMI	GCAATG	1 cut(s)	706
BseMII	CTCAG	2 cut(s)	924, 1473
BseRI	GAGGAG	6 cut(s)	232, 262, 265, 338, 635, 1516
BseSI	GKGCMC	1 cut(s)	540
BseX3I	CGGCCG	1 cut(s)	379
BseXI	GCAGC	1 cut(s)	1136
BseYI	CCCAGC	4 cut(s)	122, 533, 578, 818
BsgI	GTGCAG	1 cut(s)	611
Bsh1236I	CGCG	1 cut(s)	523
Bsh1285I	CGRYCG	1 cut(s)	382
BshFI	GGCC	6 cut(s)	381, 494, 538, 551, 586, 1379
BshNI	GGYRCC	2 cut(s)	967, 1393
BsiEI	CGRYCG	1 cut(s)	382
BsiHKCI	CYCGRG	1 cut(s)	1295
BsiSI	CCGG	4 cut(s)	28, 378, 587, 1296
BslFI	GGGAC	2 cut(s)	656, 865
BslI	CCNNNNNNNGG	4 cut(s)	564, 1209, 1550, 1551
BsmAI	GTCTC	5 cut(s)	55, 604, 977, 1079, 1498
BsmBI	CGTCTC	1 cut(s)	1498
BsmFI	GGGAC	2 cut(s)	656, 865
BsnI	GGCC	6 cut(s)	381, 494, 538, 551, 586, 1379
Bso31I	GGTCTC	1 cut(s)	604
BsoBI	CYCGRG	1 cut(s)	1295
Bsp120I	GGGCCC	1 cut(s)	536
Bsp1286I	GDGCHC	3 cut(s)	540, 636, 1296
Bsp1407I	TGTACA	1 cut(s)	828
Bsp143I	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
Bsp1720I	GCTNAGC	1 cut(s)	933
BspANI	GGCC	6 cut(s)	381, 494, 538, 551, 586, 1379
BspCNI	CTCAG	2 cut(s)	925, 1474
BspFNI	CGCG	1 cut(s)	523
BspLI	GGNNCC	4 cut(s)	538, 909, 969, 1395
BspPI	GGATC	2 cut(s)	275, 1431
BspT107I	GGYRCC	2 cut(s)	967, 1393
BspTI	CTTAAG	1 cut(s)	1511
BspTNI	GGTCTC	1 cut(s)	604
BsrDI	GCAATG	1 cut(s)	706
BsrFI	RCCGGY	2 cut(s)	377, 586
BsrGI	TGTACA	1 cut(s)	828
BssAI	RCCGGY	2 cut(s)	377, 586
BssECI	CCNNGG	6 cut(s)	391, 546, 927, 1029, 1295, 1296
BssMI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
BssNI	GRCGYC	2 cut(s)	504, 1507
BssT1I	CCWWGG	2 cut(s)	391, 546
Bst2UI	CCWGG	1 cut(s)	1418
Bst4CI	ACNGT	2 cut(s)	388, 1346
Bst6I	CTCTTC	3 cut(s)	64, 193, 1493
BstACI	GRCGYC	2 cut(s)	504, 1507
BstAFI	CTTAAG	1 cut(s)	1511
BstAUI	TGTACA	1 cut(s)	828
BstC8I	GCNNGC	3 cut(s)	379, 594, 697
BstDEI	CTNAG	3 cut(s)	933, 1452, 1482
BstF5I	GGATG	8 cut(s)	84, 411, 793, 1039, 1167, 1288, 1292, 1560
BstFNI	CGCG	1 cut(s)	523
BstH2I	RGCGCY	1 cut(s)	656
BstHHI	GCGC	4 cut(s)	520, 655, 1039, 1560
BstKTI	GATC	5 cut(s)	283, 1107, 1249, 1315, 1426
BstMAI	GTCTC	5 cut(s)	55, 604, 977, 1079, 1498
BstMBI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
BstMCI	CGRYCG	1 cut(s)	382
BstMWI	GCNNNNNNNGC	4 cut(s)	28, 701, 866, 1355
BstNI	CCWGG	1 cut(s)	1418
BstSCI	CCNGG	3 cut(s)	1294, 1295, 1416
BstSLI	GKGCMC	1 cut(s)	540
BstUI	CGCG	1 cut(s)	523
BstV1I	GCAGC	1 cut(s)	1136
BstV2I	GAAGAC	1 cut(s)	1031
BstX2I	RGATCY	1 cut(s)	1423
BstXI	CCANNNNNNTGG	1 cut(s)	547
BstYI	RGATCY	1 cut(s)	1423
BstZI	CGGCCG	1 cut(s)	379
BsuRI	GGCC	6 cut(s)	381, 494, 538, 551, 586, 1379
BtrI	CACGTC	1 cut(s)	325
BtsCI	GGATG	8 cut(s)	84, 411, 793, 1039, 1167, 1288, 1292, 1560
BtsI	GCAGTG	2 cut(s)	513, 1359
BtsIMutI	CAGTG	2 cut(s)	513, 1359
Cac8I	GCNNGC	3 cut(s)	379, 594, 697
CfoI	GCGC	4 cut(s)	520, 655, 1039, 1560
Cfr10I	RCCGGY	2 cut(s)	377, 586
Cfr13I	GGNCC	4 cut(s)	536, 537, 907, 1378
Cfr9I	CCCGGG	1 cut(s)	1295
CsiI	ACCWGGT	1 cut(s)	1416
Csp6I	GTAC	2 cut(s)	829, 1414
CviAII	CATG	3 cut(s)	500, 962, 1250
CviQI	GTAC	2 cut(s)	829, 1414
DdeI	CTNAG	3 cut(s)	933, 1452, 1482
DpnI	GATC	5 cut(s)	282, 1106, 1248, 1314, 1425
DpnII	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
EaeI	YGGCCR	2 cut(s)	379, 549
EagI	CGGCCG	1 cut(s)	379
Eam1104I	CTCTTC	3 cut(s)	64, 193, 1493
EarI	CTCTTC	3 cut(s)	64, 193, 1493
EciI	GGCGGA	1 cut(s)	358
EclXI	CGGCCG	1 cut(s)	379
Eco130I	CCWWGG	2 cut(s)	391, 546
Eco24I	GRGCYC	3 cut(s)	540, 636, 1296
Eco31I	GGTCTC	1 cut(s)	604
Eco47I	GGWCC	1 cut(s)	907
Eco52I	CGGCCG	1 cut(s)	379
Eco57I	CTGAAG	1 cut(s)	1238
Eco88I	CYCGRG	1 cut(s)	1295
EcoO109I	RGGNCCY	1 cut(s)	907
EcoRII	CCWGG	1 cut(s)	1416
EcoT14I	CCWWGG	2 cut(s)	391, 546
EcoT38I	GRGCYC	3 cut(s)	540, 636, 1296
ErhI	CCWWGG	2 cut(s)	391, 546
Esp3I	CGTCTC	1 cut(s)	1498
FaeI	CATG	3 cut(s)	503, 965, 1253
FalI	AAGNNNNNCTT	2 cut(s)	896, 928
FaqI	GGGAC	2 cut(s)	656, 865
FatI	CATG	3 cut(s)	499, 961, 1249
FauI	CCCGC	1 cut(s)	1165
FbaI	TGATCA	2 cut(s)	1104, 1246
FblI	GTMKAC	1 cut(s)	462
Fnu4HI	GCNGC	7 cut(s)	382, 495, 521, 552, 651, 1125, 1231
FokI	GGATG	8 cut(s)	71, 398, 800, 1046, 1174, 1295, 1299, 1567
FriOI	GRGCYC	3 cut(s)	540, 636, 1296
Fsp4HI	GCNGC	7 cut(s)	382, 495, 521, 552, 651, 1125, 1231
FspBI	CTAG	5 cut(s)	227, 392, 807, 855, 1128
GlaI	GCGC	4 cut(s)	519, 654, 1038, 1559
GluI	GCNGC	7 cut(s)	382, 495, 521, 552, 651, 1125, 1231
GsaI	CCCAGC	4 cut(s)	126, 537, 582, 822
HaeII	RGCGCY	1 cut(s)	656
HaeIII	GGCC	6 cut(s)	381, 494, 538, 551, 586, 1379
HapII	CCGG	4 cut(s)	28, 378, 587, 1296
HhaI	GCGC	4 cut(s)	520, 655, 1039, 1560
Hin1I	GRCGYC	2 cut(s)	504, 1507
Hin1II	CATG	3 cut(s)	503, 965, 1253
Hin6I	GCGC	4 cut(s)	518, 653, 1037, 1558
HinP1I	GCGC	4 cut(s)	518, 653, 1037, 1558
HincII	GTYRAC	1 cut(s)	463
HindII	GTYRAC	1 cut(s)	463
HindIII	AAGCTT	2 cut(s)	794, 890
HinfI	GANTC	4 cut(s)	33, 218, 269, 418
HpaII	CCGG	4 cut(s)	28, 378, 587, 1296
HphI	GGTGA	4 cut(s)	124, 319, 583, 727
Hpy166II	GTNNAC	1 cut(s)	463
Hpy188I	TCNGA	4 cut(s)	280, 928, 1218, 1428
Hpy8I	GTNNAC	1 cut(s)	463
Hpy99I	CGWCG	2 cut(s)	218, 296
HpyAV	CCTTC	9 cut(s)	193, 260, 295, 325, 348, 471, 475, 929, 1450
HpyCH4III	ACNGT	2 cut(s)	388, 1346
HpyCH4IV	ACGT	6 cut(s)	324, 504, 528, 1091, 1412, 1507
HpyCH4V	TGCA	3 cut(s)	22, 592, 897
HpyF10VI	GCNNNNNNNGC	4 cut(s)	28, 701, 866, 1355
HpyF3I	CTNAG	3 cut(s)	933, 1452, 1482
HpySE526I	ACGT	6 cut(s)	324, 504, 528, 1091, 1412, 1507
Hsp92I	GRCGYC	2 cut(s)	504, 1507
Hsp92II	CATG	3 cut(s)	503, 965, 1253
HspAI	GCGC	4 cut(s)	518, 653, 1037, 1558
KroI	GCCGGC	1 cut(s)	377
KroNI	GCCGGC	1 cut(s)	379
Ksp22I	TGATCA	2 cut(s)	1104, 1246
Kzo9I	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
LmnI	GCTCC	2 cut(s)	351, 1110
Lsp1109I	GCAGC	1 cut(s)	1136
LweI	GCATC	2 cut(s)	1024, 1545
MabI	ACCWGGT	1 cut(s)	1416
MaeI	CTAG	5 cut(s)	227, 392, 807, 855, 1128
MaeII	ACGT	6 cut(s)	324, 504, 528, 1091, 1412, 1507
MaeIII	GTNAC	3 cut(s)	325, 524, 1399
MalI	GATC	5 cut(s)	282, 1106, 1248, 1314, 1425
MboI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
MflI	RGATCY	1 cut(s)	1423
MhlI	GDGCHC	3 cut(s)	540, 636, 1296
MluCI	AATT	6 cut(s)	991, 1006, 1042, 1100, 1328, 1518
MlyI	GAGTC	2 cut(s)	27, 263
MmeI	TCCRAC	2 cut(s)	92, 280
MroNI	GCCGGC	1 cut(s)	377
MroXI	GAANNNNTTC	2 cut(s)	485, 1476
MseI	TTAA	4 cut(s)	729, 771, 1371, 1512
MslI	CAYNNNNRTG	1 cut(s)	1344
MspA1I	CMGCKG	2 cut(s)	45, 1172
MspCI	CTTAAG	1 cut(s)	1511
MspI	CCGG	4 cut(s)	28, 378, 587, 1296
MspR9I	CCNGG	3 cut(s)	1296, 1297, 1418
MvaI	CCWGG	1 cut(s)	1418
MvnI	CGCG	1 cut(s)	523
MwoI	GCNNNNNNNGC	4 cut(s)	28, 701, 866, 1355
NaeI	GCCGGC	1 cut(s)	379
NciI	CCSGG	2 cut(s)	1296, 1297
NdeII	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
NgoMIV	GCCGGC	1 cut(s)	377
NlaIII	CATG	3 cut(s)	503, 965, 1253
NlaIV	GGNNCC	4 cut(s)	538, 909, 969, 1395
NmeAIII	GCCGAG	1 cut(s)	996
NmuCI	GTSAC	3 cut(s)	325, 524, 1399
OliI	CACNNNNGTG	1 cut(s)	1344
PdiI	GCCGGC	1 cut(s)	379
PdmI	GAANNNNTTC	2 cut(s)	485, 1476
PfeI	GAWTC	2 cut(s)	218, 418
PkrI	GCNGC	7 cut(s)	383, 496, 522, 553, 652, 1126, 1232
PleI	GAGTC	2 cut(s)	27, 263
PpsI	GAGTC	2 cut(s)	27, 263
PpuMI	RGGWCCY	1 cut(s)	907
Psp5II	RGGWCCY	1 cut(s)	907
Psp6I	CCWGG	1 cut(s)	1416
PspFI	CCCAGC	4 cut(s)	122, 533, 578, 818
PspGI	CCWGG	1 cut(s)	1416
PspN4I	GGNNCC	4 cut(s)	538, 909, 969, 1395
PspOMI	GGGCCC	1 cut(s)	536
PspPI	GGNCC	4 cut(s)	536, 537, 907, 1378
PspPPI	RGGWCCY	1 cut(s)	907
PsuI	RGATCY	1 cut(s)	1423
RsaI	GTAC	2 cut(s)	830, 1415
RsaNI	GTAC	2 cut(s)	829, 1414
RseI	CAYNNNNRTG	1 cut(s)	1344
SalI	GTCGAC	1 cut(s)	461
SaqAI	TTAA	4 cut(s)	729, 771, 1371, 1512
SatI	GCNGC	7 cut(s)	382, 495, 521, 552, 651, 1125, 1231
Sau3AI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
Sau96I	GGNCC	4 cut(s)	536, 537, 907, 1378
SchI	GAGTC	2 cut(s)	27, 263
ScrFI	CCNGG	3 cut(s)	1296, 1297, 1418
SduI	GDGCHC	3 cut(s)	540, 636, 1296
SexAI	ACCWGGT	1 cut(s)	1416
SfaNI	GCATC	2 cut(s)	1024, 1545
SinI	GGWCC	1 cut(s)	907
SmaI	CCCGGG	1 cut(s)	1297
SmiMI	CAYNNNNRTG	1 cut(s)	1344
SmlI	CTYRAG	2 cut(s)	635, 1511
SmoI	CTYRAG	2 cut(s)	635, 1511
SpeI	ACTAGT	1 cut(s)	854
Sse9I	AATT	6 cut(s)	991, 1006, 1042, 1100, 1328, 1518
SspMI	CTAG	5 cut(s)	227, 392, 807, 855, 1128
StyD4I	CCNGG	3 cut(s)	1294, 1295, 1416
StyI	CCWWGG	2 cut(s)	391, 546
TaaI	ACNGT	2 cut(s)	388, 1346
TaiI	ACGT	6 cut(s)	327, 507, 531, 1094, 1415, 1510
TaqI	TCGA	2 cut(s)	462, 658
TaqII	GACCGA	1 cut(s)	1043
TasI	AATT	6 cut(s)	991, 1006, 1042, 1100, 1328, 1518
TatI	WGTACW	1 cut(s)	828
TauI	GCSGC	6 cut(s)	384, 497, 523, 554, 653, 1233
TfiI	GAWTC	2 cut(s)	218, 418
Tru1I	TTAA	4 cut(s)	729, 771, 1371, 1512
Tru9I	TTAA	4 cut(s)	729, 771, 1371, 1512
TscAI	CASTG	2 cut(s)	520, 1366
TseFI	GTSAC	3 cut(s)	325, 524, 1399
TseI	GCWGC	1 cut(s)	1124
Tsp45I	GTSAC	3 cut(s)	325, 524, 1399
TspDTI	ATGAA	6 cut(s)	911, 950, 1040, 1161, 1178, 1289
TspGWI	ACGGA	2 cut(s)	280, 343
TspMI	CCCGGG	1 cut(s)	1295
TspRI	CASTG	2 cut(s)	520, 1366
Vha464I	CTTAAG	1 cut(s)	1511
VpaK11BI	GGWCC	1 cut(s)	907
XapI	RAATTY	2 cut(s)	1042, 1518
XcmI	CCANNNNNNNNNTGG	1 cut(s)	565
XmaI	CCCGGG	1 cut(s)	1295
XmaJI	CCTAGG	1 cut(s)	391
XmiI	GTMKAC	1 cut(s)	462
XmnI	GAANNNNTTC	2 cut(s)	485, 1476
XspI	CTAG	5 cut(s)	227, 392, 807, 855, 1128
ZraI	GACGTC	2 cut(s)	505, 1508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.