Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0005657

Physical Location & Seq

Genomic Coordinates Forward (+)

43970193 .. 43972119

Gene Structure 1927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G030930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGAGGTCTTTGAAGCCTCTGCAACTCCGGCGACTCCTACTCCGCTGTGTCTCCACCTCTTCTTCTCCAACCCTCATCCCATTTCCCTCAACCAAACCCACCCACCAAATCCCCAACTCAATCACCACCACCTCTCACTTTCTCTCTCTACCCCATTTCTCTCTCCCCAAATCCTTCTCTTCTTCCTCATCCCCACCACCCCCCGACGAATCCCAACTAGCCCAATCCATCTCCTCTCACCTTCTCCACCACCAACCCGACTCCTCCTCCGATCCCTTCTCCGTCGCCCAAGCCCTCCAATCCACCTTCCCTCACGTCACCCCCACCCCTTCTCTGCTCATCGCCGTCCTCAACCTCTCCGCCGAAGCCGGCCGCACCGTCCTAGGCTTCAACCACTGGCTCATCCAGAACCCTGATTTCCACCACACCGACGACACCCTCTCCTACTTTGTCGACTACTTCGGCAGGAGGAAGGATTTCAAGGCCGCCCATGACGTCATTCTCACTGCACCGCGTGACGTTGCCGGGCCCAAGACCTTGGCCGCCTCCATTGACAGGCTGGTGAGAGCTGGGAGGCCGGCGCAGGCGGTCTCTTTCTTTGAGAAGATGGAGGAGGACTATGGGCTCAAGAGGGACAAGGCGGCGCTTCGATTGGTTGTGGAGAAGCTCTGCGAGAATGGTTCTGCCAGCAATGCTGAGAAGATGGTGAAAGGTTTGGTTAATGAGTTTTTCCCTGATGAGTATATTTGCGATTTGCTTATTAAGGGGTGGTGTGTGGATGGGAAGCTTGACGAGGCTAGGAGATTGGCTGGGGAGATGTATAGGGGAGGGTTTGAGATTGGGACTAGTGCCTTCAATGCCATTCTTGATTGTGTGTGTAAGCTTTGCAGGAAAAAGGACCCCTTTCGGCTTCATTCCGAGGCTGAGCAGATTTTGGTGGATATGGACTTCCATGGGGTGCCGAGAAATGTGGAGACTTTCAATGTGCTGATTACTAATTTGTGTAAGATTAGGAAGACCGAGGACGCGATGAATTTGTTTCATAGAATGGGGGAGTGGGGGTGTTCTCCTAACGAGACTACGTTTCTTGAATTGGTCAGGAGCTTGTATCAGGCAGCTAGGGTTGGGGAGGGAGATGAAATGATTGATAGGATGAAATCAGCGGGGTTCGGGGAGGCTCTTGATAAGAAGGCCTATTTTGGGTTTCTGAAGATTTTGTGCGGCATTGAGAGGATTGATCATGCTTTGTCTGTTTTCAAGAAAATGAAGCAGGATGGATGTGAGCCCGGGGTCAAGAGTTATGATCTGCTGATGGGAAAATTGTATGCTCACAACCGTGCTGACAGAGCCACTGCCCTGTTTAATGAGGCCCAAAAGAAAGGGGTGCCTGTGACACACAAGACATACCAGGTGGATCCGAAATACTTGAAGAAGCCAAAGGCTAAGAAGGAGAATATGAGGGAAACACTTCCTGAGAAGATGGCAAGGAAGAGGAGGCGTCTTAAGCAAATTCGGTTGAGCTTCGTAAAGAAGCCCAAAAAGGGGATGCGCCGAGCCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

520

Amino Acids

58.66

Weight (kDa)

9.39

Isoelectric Point (pI)

39.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	311 - 362	2.7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	323 - 367	1.7e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60960
fragaria_vesca	FvH4_5g29994 FvH4_5g29994 FvH4_5g29994 FvH4_7g15150
malus_domestica	MD06G1203500.v1.1 MD14G1214300.v1.1
prunus_persica	Prupe.5G207600_v2.0.a1
pyrus_communis	pycom06g18160 pycom14g17770 pycom16g18740
rosa_chinensis	RchiOBHm_Chr7g0224161 RchiOBHm_Chr7g0224171
rosa_laevigata	RLG00000001915
rosa_multiflora	Rmu_co8487915.1_g000001 Rmu_sc0008008.1_g000001 Rmu_sc0023501.1_g000005
rosa_roxburghii	Rroxscaffold_3G00235130 Rroxscaffold_3G00235140 Rroxscaffold_3G00235150
rosa_rugosa	Rorug07G0199800 Rorug07G0221500
rosa_samantha	Rh7AG365400 Rh7BG357100 Rh7CG384300 Rh7DG360200
rosa_wichuraiana	Rw7G030930 Rw7G030940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	498
AccB1I	GGYRCC	2 cut(s)	958, 1384
AccI	GTMKAC	1 cut(s)	453
AccII	CGCG	2 cut(s)	514, 1028
AclWI	GGATC	3 cut(s)	266, 1409, 1422
AcoI	YGGCCR	2 cut(s)	370, 540
AcsI	RAATTY	2 cut(s)	1033, 1509
AcuI	CTGAAG	1 cut(s)	1229
AcyI	GRCGYC	2 cut(s)	495, 1498
AdeI	CACNNNGTG	1 cut(s)	515
AfiI	CCNNNNNNNGG	4 cut(s)	555, 1200, 1541, 1542
AflII	CTTAAG	1 cut(s)	1502
AgsI	TTSAA	8 cut(s)	13, 391, 481, 856, 982, 1091, 1258, 1429
AhlI	ACTAGT	1 cut(s)	845
AjiI	CACGTC	1 cut(s)	316
AjnI	CCWGG	1 cut(s)	1407
AleI	CACNNNNGTG	1 cut(s)	1335
AluBI	AGCT	7 cut(s)	569, 667, 787, 883, 1104, 1118, 1521
AluI	AGCT	7 cut(s)	569, 667, 787, 883, 1104, 1118, 1521
Alw26I	GTCTC	4 cut(s)	55, 595, 968, 1070
AlwI	GGATC	3 cut(s)	266, 1409, 1422
Ama87I	CYCGRG	1 cut(s)	1286
AoxI	GGCC	7 cut(s)	370, 483, 527, 540, 575, 1191, 1368
ApaI	GGGCCC	1 cut(s)	531
ApeKI	GCWGC	1 cut(s)	1115
ApoI	RAATTY	2 cut(s)	1033, 1509
Asp700I	GAANNNNTTC	2 cut(s)	476, 1467
AspA2I	CCTAGG	1 cut(s)	382
AspLEI	GCGC	3 cut(s)	583, 646, 1551
AspS9I	GGNCC	4 cut(s)	527, 528, 898, 1369
AsuC2I	CCSGG	3 cut(s)	526, 1287, 1288
AsuHPI	GGTGA	5 cut(s)	115, 230, 310, 574, 718
AvaI	CYCGRG	1 cut(s)	1286
AvaII	GGWCC	1 cut(s)	898
AvrII	CCTAGG	1 cut(s)	382
BaeGI	GKGCMC	1 cut(s)	531
BamHI	GGATCC	1 cut(s)	1414
BanI	GGYRCC	2 cut(s)	958, 1384
BanII	GRGCYC	3 cut(s)	531, 627, 1287
BbsI	GAAGAC	1 cut(s)	1022
BbvI	GCAGC	1 cut(s)	1127
BccI	CCATC	7 cut(s)	236, 601, 697, 773, 1268, 1306, 1474
BceAI	ACGGC	1 cut(s)	329
BciT130I	CCWGG	1 cut(s)	1409
BclI	TGATCA	1 cut(s)	1237
BcnI	CCSGG	3 cut(s)	526, 1287, 1288
BcoDI	GTCTC	4 cut(s)	55, 595, 968, 1070
BcuI	ACTAGT	1 cut(s)	845
BfaI	CTAG	5 cut(s)	218, 383, 798, 846, 1119
BfoI	RGCGCY	1 cut(s)	647
BfrI	CTTAAG	1 cut(s)	1502
BisI	GCNGC	6 cut(s)	373, 486, 543, 642, 1116, 1222
BlnI	CCTAGG	1 cut(s)	382
BlpI	GCTNAGC	1 cut(s)	924
BlsI	GCNGC	6 cut(s)	374, 487, 544, 643, 1117, 1223
Bme1390I	CCNGG	4 cut(s)	526, 1287, 1288, 1409
Bme18I	GGWCC	1 cut(s)	898
BmeT110I	CYCGRG	1 cut(s)	1286
BmgBI	CACGTC	1 cut(s)	316
BmgT120I	GGNCC	4 cut(s)	527, 528, 898, 1369
BmiI	GGNNCC	5 cut(s)	529, 900, 960, 1386, 1416
BmrFI	CCNGG	4 cut(s)	526, 1287, 1288, 1409
BmsI	GCATC	1 cut(s)	1536
BpiI	GAAGAC	1 cut(s)	1022
Bpu1102I	GCTNAGC	1 cut(s)	924
BpuEI	CTTGAG	1 cut(s)	611
BpuMI	CCSGG	3 cut(s)	526, 1287, 1288
BsaHI	GRCGYC	2 cut(s)	495, 1498
BsaI	GGTCTC	1 cut(s)	595
BsaJI	CCNNGG	7 cut(s)	382, 537, 918, 952, 1020, 1286, 1287
BsaXI	ACNNNNNCTCC	8 cut(s)	24, 54, 251, 281, 425, 455, 1046, 1076
Bsc4I	CCNNNNNNNGG	4 cut(s)	555, 1200, 1541, 1542
Bse118I	RCCGGY	2 cut(s)	368, 577
Bse1I	ACTGG	1 cut(s)	401
Bse3DI	GCAATG	1 cut(s)	697
BseBI	CCWGG	1 cut(s)	1409
BseDI	CCNNGG	7 cut(s)	382, 537, 918, 952, 1020, 1286, 1287
BseGI	GGATG	8 cut(s)	75, 188, 402, 784, 1158, 1279, 1283, 1551
BseLI	CCNNNNNNNGG	4 cut(s)	555, 1200, 1541, 1542
BseMI	GCAATG	1 cut(s)	697
BseMII	CTCAG	3 cut(s)	687, 915, 1464
BseNI	ACTGG	1 cut(s)	401
BseRI	GAGGAG	5 cut(s)	223, 253, 256, 626, 1507
BseSI	GKGCMC	1 cut(s)	531
BseX3I	CGGCCG	1 cut(s)	370
BseXI	GCAGC	1 cut(s)	1127
BseYI	CCCAGC	2 cut(s)	569, 809
BsgI	GTGCAG	1 cut(s)	492
Bsh1236I	CGCG	2 cut(s)	514, 1028
Bsh1285I	CGRYCG	1 cut(s)	373
BshFI	GGCC	7 cut(s)	372, 485, 529, 542, 577, 1193, 1370
BshNI	GGYRCC	2 cut(s)	958, 1384
BsiEI	CGRYCG	1 cut(s)	373
BsiHKCI	CYCGRG	1 cut(s)	1286
BsiSI	CCGG	5 cut(s)	28, 369, 525, 578, 1287
BslFI	GGGAC	2 cut(s)	647, 856
BslI	CCNNNNNNNGG	4 cut(s)	555, 1200, 1541, 1542
BsmAI	GTCTC	4 cut(s)	55, 595, 968, 1070
BsmFI	GGGAC	2 cut(s)	647, 856
BsnI	GGCC	7 cut(s)	372, 485, 529, 542, 577, 1193, 1370
Bso31I	GGTCTC	1 cut(s)	595
BsoBI	CYCGRG	1 cut(s)	1286
Bsp120I	GGGCCC	1 cut(s)	527
Bsp1286I	GDGCHC	3 cut(s)	531, 627, 1287
Bsp143I	GATC	4 cut(s)	271, 1237, 1303, 1414
Bsp1720I	GCTNAGC	1 cut(s)	924
Bsp19I	CCATGG	1 cut(s)	952
BspANI	GGCC	7 cut(s)	372, 485, 529, 542, 577, 1193, 1370
BspCNI	CTCAG	3 cut(s)	688, 916, 1465
BspFNI	CGCG	2 cut(s)	514, 1028
BspLI	GGNNCC	5 cut(s)	529, 900, 960, 1386, 1416
BspPI	GGATC	3 cut(s)	266, 1409, 1422
BspT107I	GGYRCC	2 cut(s)	958, 1384
BspTI	CTTAAG	1 cut(s)	1502
BspTNI	GGTCTC	1 cut(s)	595
BsrDI	GCAATG	1 cut(s)	697
BsrFI	RCCGGY	2 cut(s)	368, 577
BsrI	ACTGG	1 cut(s)	401
BssAI	RCCGGY	2 cut(s)	368, 577
BssECI	CCNNGG	7 cut(s)	382, 537, 918, 952, 1020, 1286, 1287
BssMI	GATC	4 cut(s)	271, 1237, 1303, 1414
BssNI	GRCGYC	2 cut(s)	495, 1498
BssT1I	CCWWGG	3 cut(s)	382, 537, 952
Bst2UI	CCWGG	1 cut(s)	1409
Bst4CI	ACNGT	2 cut(s)	379, 1337
Bst6I	CTCTTC	3 cut(s)	64, 184, 1484
BstACI	GRCGYC	2 cut(s)	495, 1498
BstAFI	CTTAAG	1 cut(s)	1502
BstC8I	GCNNGC	4 cut(s)	370, 579, 585, 688
BstDEI	CTNAG	4 cut(s)	696, 924, 1443, 1473
BstDSI	CCRYGG	1 cut(s)	952
BstF5I	GGATG	8 cut(s)	75, 188, 402, 784, 1158, 1279, 1283, 1551
BstFNI	CGCG	2 cut(s)	514, 1028
BstH2I	RGCGCY	1 cut(s)	647
BstHHI	GCGC	3 cut(s)	583, 646, 1551
BstKTI	GATC	4 cut(s)	274, 1240, 1306, 1417
BstMAI	GTCTC	4 cut(s)	55, 595, 968, 1070
BstMBI	GATC	4 cut(s)	271, 1237, 1303, 1414
BstMCI	CGRYCG	1 cut(s)	373
BstMWI	GCNNNNNNNGC	5 cut(s)	28, 692, 857, 1346, 1504
BstNI	CCWGG	1 cut(s)	1409
BstSCI	CCNGG	4 cut(s)	524, 1285, 1286, 1407
BstSLI	GKGCMC	1 cut(s)	531
BstUI	CGCG	2 cut(s)	514, 1028
BstV1I	GCAGC	1 cut(s)	1127
BstV2I	GAAGAC	1 cut(s)	1022
BstX2I	RGATCY	1 cut(s)	1414
BstXI	CCANNNNNNTGG	1 cut(s)	538
BstYI	RGATCY	1 cut(s)	1414
BstZI	CGGCCG	1 cut(s)	370
BsuRI	GGCC	7 cut(s)	372, 485, 529, 542, 577, 1193, 1370
BtgI	CCRYGG	1 cut(s)	952
BtgZI	GCGATG	2 cut(s)	325, 1043
BtrI	CACGTC	1 cut(s)	316
BtsCI	GGATG	8 cut(s)	75, 188, 402, 784, 1158, 1279, 1283, 1551
BtsI	GCAGTG	2 cut(s)	504, 1350
BtsIMutI	CAGTG	3 cut(s)	394, 504, 1350
Cac8I	GCNNGC	4 cut(s)	370, 579, 585, 688
CfoI	GCGC	3 cut(s)	583, 646, 1551
Cfr10I	RCCGGY	2 cut(s)	368, 577
Cfr13I	GGNCC	4 cut(s)	527, 528, 898, 1369
Cfr9I	CCCGGG	1 cut(s)	1286
CseI	GACGC	2 cut(s)	1034, 1487
CsiI	ACCWGGT	1 cut(s)	1407
CviAII	CATG	3 cut(s)	491, 953, 1241
DdeI	CTNAG	4 cut(s)	696, 924, 1443, 1473
DpnI	GATC	4 cut(s)	273, 1239, 1305, 1416
DpnII	GATC	4 cut(s)	271, 1237, 1303, 1414
DraIII	CACNNNGTG	1 cut(s)	515
EaeI	YGGCCR	2 cut(s)	370, 540
EagI	CGGCCG	1 cut(s)	370
Eam1104I	CTCTTC	3 cut(s)	64, 184, 1484
EarI	CTCTTC	3 cut(s)	64, 184, 1484
EciI	GGCGGA	1 cut(s)	349
EclXI	CGGCCG	1 cut(s)	370
Eco130I	CCWWGG	3 cut(s)	382, 537, 952
Eco147I	AGGCCT	1 cut(s)	1193
Eco24I	GRGCYC	3 cut(s)	531, 627, 1287
Eco31I	GGTCTC	1 cut(s)	595
Eco47I	GGWCC	1 cut(s)	898
Eco52I	CGGCCG	1 cut(s)	370
Eco57I	CTGAAG	1 cut(s)	1229
Eco88I	CYCGRG	1 cut(s)	1286
EcoO109I	RGGNCCY	1 cut(s)	898
EcoRII	CCWGG	1 cut(s)	1407
EcoT14I	CCWWGG	3 cut(s)	382, 537, 952
EcoT38I	GRGCYC	3 cut(s)	531, 627, 1287
ErhI	CCWWGG	3 cut(s)	382, 537, 952
FaeI	CATG	3 cut(s)	494, 956, 1244
FalI	AAGNNNNNCTT	2 cut(s)	887, 919
FaqI	GGGAC	2 cut(s)	647, 856
FatI	CATG	3 cut(s)	490, 952, 1240
FauI	CCCGC	1 cut(s)	1156
FbaI	TGATCA	1 cut(s)	1237
FblI	GTMKAC	1 cut(s)	453
Fnu4HI	GCNGC	6 cut(s)	373, 486, 543, 642, 1116, 1222
FokI	GGATG	8 cut(s)	62, 175, 389, 791, 1165, 1286, 1290, 1558
FriOI	GRGCYC	3 cut(s)	531, 627, 1287
Fsp4HI	GCNGC	6 cut(s)	373, 486, 543, 642, 1116, 1222
FspBI	CTAG	5 cut(s)	218, 383, 798, 846, 1119
GlaI	GCGC	3 cut(s)	582, 645, 1550
GluI	GCNGC	6 cut(s)	373, 486, 543, 642, 1116, 1222
GsaI	CCCAGC	2 cut(s)	573, 813
HaeII	RGCGCY	1 cut(s)	647
HaeIII	GGCC	7 cut(s)	372, 485, 529, 542, 577, 1193, 1370
HapII	CCGG	5 cut(s)	28, 369, 525, 578, 1287
HgaI	GACGC	2 cut(s)	1034, 1487
HhaI	GCGC	3 cut(s)	583, 646, 1551
Hin1I	GRCGYC	2 cut(s)	495, 1498
Hin1II	CATG	3 cut(s)	494, 956, 1244
Hin6I	GCGC	3 cut(s)	581, 644, 1549
HinP1I	GCGC	3 cut(s)	581, 644, 1549
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	2 cut(s)	785, 881
HinfI	GANTC	3 cut(s)	33, 209, 260
HpaII	CCGG	5 cut(s)	28, 369, 525, 578, 1287
HphI	GGTGA	5 cut(s)	115, 230, 310, 574, 718
Hpy166II	GTNNAC	1 cut(s)	454
Hpy188I	TCNGA	4 cut(s)	271, 919, 1209, 1419
Hpy188III	TCNNGA	9 cut(s)	406, 628, 866, 1088, 1099, 1181, 1258, 1294, 1472
Hpy8I	GTNNAC	1 cut(s)	454
Hpy99I	CGWCG	3 cut(s)	209, 287, 434
HpyAV	CCTTC	9 cut(s)	184, 251, 286, 316, 339, 466, 862, 1183, 1441
HpyCH4III	ACNGT	2 cut(s)	379, 1337
HpyCH4IV	ACGT	4 cut(s)	315, 495, 519, 1082
HpyCH4V	TGCA	3 cut(s)	22, 509, 888
HpyF10VI	GCNNNNNNNGC	5 cut(s)	28, 692, 857, 1346, 1504
HpyF3I	CTNAG	4 cut(s)	696, 924, 1443, 1473
HpySE526I	ACGT	4 cut(s)	315, 495, 519, 1082
Hsp92I	GRCGYC	2 cut(s)	495, 1498
Hsp92II	CATG	3 cut(s)	494, 956, 1244
HspAI	GCGC	3 cut(s)	581, 644, 1549
KroI	GCCGGC	2 cut(s)	368, 577
KroNI	GCCGGC	2 cut(s)	370, 579
Ksp22I	TGATCA	1 cut(s)	1237
Kzo9I	GATC	4 cut(s)	271, 1237, 1303, 1414
LmnI	GCTCC	1 cut(s)	1101
Lsp1109I	GCAGC	1 cut(s)	1127
LweI	GCATC	1 cut(s)	1536
MabI	ACCWGGT	1 cut(s)	1407
MaeI	CTAG	5 cut(s)	218, 383, 798, 846, 1119
MaeII	ACGT	4 cut(s)	315, 495, 519, 1082
MaeIII	GTNAC	3 cut(s)	316, 515, 1390
MalI	GATC	4 cut(s)	273, 1239, 1305, 1416
MboI	GATC	4 cut(s)	271, 1237, 1303, 1414
MflI	RGATCY	1 cut(s)	1414
MhlI	GDGCHC	3 cut(s)	531, 627, 1287
MluCI	AATT	5 cut(s)	997, 1033, 1091, 1319, 1509
MlyI	GAGTC	2 cut(s)	27, 254
MmeI	TCCRAC	1 cut(s)	92
MroNI	GCCGGC	2 cut(s)	368, 577
MroXI	GAANNNNTTC	2 cut(s)	476, 1467
MseI	TTAA	4 cut(s)	720, 762, 1362, 1503
MslI	CAYNNNNRTG	1 cut(s)	1335
MspA1I	CMGCKG	2 cut(s)	45, 1163
MspCI	CTTAAG	1 cut(s)	1502
MspI	CCGG	5 cut(s)	28, 369, 525, 578, 1287
MspR9I	CCNGG	4 cut(s)	526, 1287, 1288, 1409
MvaI	CCWGG	1 cut(s)	1409
MvnI	CGCG	2 cut(s)	514, 1028
MwoI	GCNNNNNNNGC	5 cut(s)	28, 692, 857, 1346, 1504
NaeI	GCCGGC	2 cut(s)	370, 579
NciI	CCSGG	3 cut(s)	526, 1287, 1288
NcoI	CCATGG	1 cut(s)	952
NdeII	GATC	4 cut(s)	271, 1237, 1303, 1414
NgoMIV	GCCGGC	2 cut(s)	368, 577
NlaIII	CATG	3 cut(s)	494, 956, 1244
NlaIV	GGNNCC	5 cut(s)	529, 900, 960, 1386, 1416
NmeAIII	GCCGAG	1 cut(s)	987
NmuCI	GTSAC	3 cut(s)	316, 515, 1390
OliI	CACNNNNGTG	1 cut(s)	1335
PceI	AGGCCT	1 cut(s)	1193
PdiI	GCCGGC	2 cut(s)	370, 579
PdmI	GAANNNNTTC	2 cut(s)	476, 1467
PfeI	GAWTC	1 cut(s)	209
PkrI	GCNGC	6 cut(s)	374, 487, 544, 643, 1117, 1223
PleI	GAGTC	2 cut(s)	27, 254
PpsI	GAGTC	2 cut(s)	27, 254
PpuMI	RGGWCCY	1 cut(s)	898
Psp5II	RGGWCCY	1 cut(s)	898
Psp6I	CCWGG	1 cut(s)	1407
PspFI	CCCAGC	2 cut(s)	569, 809
PspGI	CCWGG	1 cut(s)	1407
PspN4I	GGNNCC	5 cut(s)	529, 900, 960, 1386, 1416
PspOMI	GGGCCC	1 cut(s)	527
PspPI	GGNCC	4 cut(s)	527, 528, 898, 1369
PspPPI	RGGWCCY	1 cut(s)	898
PsuI	RGATCY	1 cut(s)	1414
RseI	CAYNNNNRTG	1 cut(s)	1335
SalI	GTCGAC	1 cut(s)	452
SaqAI	TTAA	4 cut(s)	720, 762, 1362, 1503
SatI	GCNGC	6 cut(s)	373, 486, 543, 642, 1116, 1222
Sau3AI	GATC	4 cut(s)	271, 1237, 1303, 1414
Sau96I	GGNCC	4 cut(s)	527, 528, 898, 1369
SchI	GAGTC	2 cut(s)	27, 254
ScrFI	CCNGG	4 cut(s)	526, 1287, 1288, 1409
SduI	GDGCHC	3 cut(s)	531, 627, 1287
SexAI	ACCWGGT	1 cut(s)	1407
SfaNI	GCATC	1 cut(s)	1536
SinI	GGWCC	1 cut(s)	898
SmaI	CCCGGG	1 cut(s)	1288
SmiMI	CAYNNNNRTG	1 cut(s)	1335
SmlI	CTYRAG	2 cut(s)	626, 1502
SmoI	CTYRAG	2 cut(s)	626, 1502
SpeI	ACTAGT	1 cut(s)	845
Sse9I	AATT	5 cut(s)	997, 1033, 1091, 1319, 1509
SseBI	AGGCCT	1 cut(s)	1193
SspMI	CTAG	5 cut(s)	218, 383, 798, 846, 1119
StuI	AGGCCT	1 cut(s)	1193
StyD4I	CCNGG	4 cut(s)	524, 1285, 1286, 1407
StyI	CCWWGG	3 cut(s)	382, 537, 952
TaaI	ACNGT	2 cut(s)	379, 1337
TaiI	ACGT	4 cut(s)	318, 498, 522, 1085
TaqI	TCGA	2 cut(s)	453, 649
TaqII	GACCGA	1 cut(s)	1034
TasI	AATT	5 cut(s)	997, 1033, 1091, 1319, 1509
TauI	GCSGC	5 cut(s)	375, 488, 545, 644, 1224
TfiI	GAWTC	1 cut(s)	209
Tru1I	TTAA	4 cut(s)	720, 762, 1362, 1503
Tru9I	TTAA	4 cut(s)	720, 762, 1362, 1503
TscAI	CASTG	3 cut(s)	401, 511, 1357
TseFI	GTSAC	3 cut(s)	316, 515, 1390
TseI	GCWGC	1 cut(s)	1115
Tsp45I	GTSAC	3 cut(s)	316, 515, 1390
TspDTI	ATGAA	6 cut(s)	902, 1031, 1046, 1152, 1169, 1280
TspGWI	ACGGA	1 cut(s)	271
TspMI	CCCGGG	1 cut(s)	1286
TspRI	CASTG	3 cut(s)	401, 511, 1357
Vha464I	CTTAAG	1 cut(s)	1502
VpaK11BI	GGWCC	1 cut(s)	898
XapI	RAATTY	2 cut(s)	1033, 1509
XcmI	CCANNNNNNNNNTGG	1 cut(s)	556
XmaI	CCCGGG	1 cut(s)	1286
XmaJI	CCTAGG	1 cut(s)	382
XmiI	GTMKAC	1 cut(s)	453
XmnI	GAANNNNTTC	2 cut(s)	476, 1467
XspI	CTAG	5 cut(s)	218, 383, 798, 846, 1119
ZraI	GACGTC	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.