Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005657

Physical Location & Seq

Genomic Coordinates Reverse (-)

21957571 .. 21959071

Gene Structure 1501 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00235140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGAGGTCTTTGAAGCCTCTGCAACTCCGGCGACTCCTACTCCGCTGTGTCTCCACCTCTTCTTCTCCAACCCTCCAAACCCTCATCCCATTTCCCTCAACCAAACCCACCCACCAAATCCCCAACTCAATCGCCACTACCTCTCACTTTCTCTCTCTACCCCACTTCTCTCTCCCCAAATCCTTCTCTTCTTCCTCAACCCCACCACCCGTCGACGAATCCCAACTAGCCCAATCCATCTCCTCCCACCTTCTTCAACACCAACCCGACTCCTCCTCCGTCGCCCAATCCCTCCAATCCACCTTCCCTCACGTCACCCCCACCCCTTCTCTGCTTCTCTCCGTCCTCAACCTCTCCGCCGAAGCCAGCCGCACCGTCCTAGGGAGGAAGGATTTCAAGGCCGCCCATGACGTCATTCTCAGTGCGCCGCTTGACGTTGCGGGGCCCAAGACCTTGGCCGCCTCCATTGACAGGCTGGTGAGAGCCGGGAGGCCGGCGCAGGCGGTCTCTTTCTTTGAGAAGATGGAGGAGGACTATGGGCTCAAGAGGGACAAGGCCGCGCTTCGATTGGTAGTGGAGAAGCTCTGCGAGAATGGTTCTGCCAGCAATGCTGAGAAGATGAGATTGGCTGGGGAGATGTATCGGGGAGGGTTTGAGATTGGGACTAGTGCTTTCAATGCCATTCTTGATTGCGTGTGTAAGCTTTGCAGGAAAAAGGACCCCTTTCGGCTGCATTCTGAGGTTGAGCAGATTTTGGTGGATATGGACTTCCATGGGGTGCCGAGAAATGTGGAGACTTTCAATGTGCTGATTACTAATTTGTGTAAGATTAGGAAGACCGAGGACGCGTTGAATTTGTTTCATAGAATGGGGGAGTGGGGGTGTTCTCCTAACGAGACTACGTTTCTTGAATTGATCAGGAGCTTGTATCAGGCAGCTAGGGTTGGGGAGGGAGATGAAATGATCGATAGGATGAAATCAGCAGGGTTCGGGGAGGCTCTTGATAAGAAGGCCTATTTTGGGTTTCTGAAGATTTTGTGCAGCATTGAGAGGATTGATCATGCTTTGTCTGTTTTCAAGAAAATGAAGCAGGATGGATGTGAGCCCAGGGTCAAGAGTTATGATCTGCTGATGGGAAAATTGTATGCTCACAACCATGCTGATAGAGCCACTGCCCTGTTTAATGAGGCCCAAAAGAAAGGGGTGCCTGTGACACACAAGACATACCAGGTGGATCCGAAATACTTGAAGAAGCCAAAGGCTAAGAAGGAGAATACGAGGGAAACACTTCCTGAGAAGATGGCAAGGAAGAGGAGACGTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

441

Amino Acids

49.29

Weight (kDa)

9.48

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	251 - 306	2e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	263 - 309	4.8e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60960
fragaria_vesca	FvH4_5g29994 FvH4_5g29994 FvH4_5g29994 FvH4_7g15150
malus_domestica	MD06G1203500.v1.1 MD14G1214300.v1.1
prunus_persica	Prupe.5G207600_v2.0.a1
pyrus_communis	pycom06g18160 pycom14g17770 pycom16g18740
rosa_chinensis	RchiOBHm_Chr7g0224161 RchiOBHm_Chr7g0224171
rosa_laevigata	RLG00000001915
rosa_multiflora	Rmu_co8487915.1_g000001 Rmu_sc0008008.1_g000001 Rmu_sc0023501.1_g000005
rosa_roxburghii	Rroxscaffold_3G00235130 Rroxscaffold_3G00235140 Rroxscaffold_3G00235150
rosa_rugosa	Rorug07G0199800 Rorug07G0221500
rosa_samantha	Rh7AG365400 Rh7BG357100 Rh7CG384300 Rh7DG360200
rosa_wichuraiana	Rw7G030930 Rw7G030940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	414, 1321
AccB1I	GGYRCC	2 cut(s)	778, 1204
AccI	GTMKAC	1 cut(s)	213
AccII	CGCG	2 cut(s)	560, 848
AciI	CCGC	9 cut(s)	43, 357, 370, 402, 428, 440, 459, 503, 558
AclWI	GGATC	2 cut(s)	1229, 1242
AcoI	YGGCCR	1 cut(s)	456
AcsI	RAATTY	1 cut(s)	853
AcuI	CTGAAG	1 cut(s)	1049
AcyI	GRCGYC	2 cut(s)	411, 1318
AfiI	CCNNNNNNNGG	3 cut(s)	381, 471, 1020
AflIII	ACRYGT	1 cut(s)	846
AgsI	TTSAA	9 cut(s)	13, 257, 397, 676, 802, 853, 911, 1078, 1249
AhlI	ACTAGT	1 cut(s)	665
AjiI	CACGTC	1 cut(s)	313
AjnI	CCWGG	2 cut(s)	1106, 1227
AjuI	GAANNNNNNNTTGG	2 cut(s)	608, 640
AluBI	AGCT	4 cut(s)	583, 703, 924, 938
AluI	AGCT	4 cut(s)	583, 703, 924, 938
Alw26I	GTCTC	5 cut(s)	55, 511, 788, 890, 1309
AlwI	GGATC	2 cut(s)	1229, 1242
AoxI	GGCC	7 cut(s)	399, 443, 456, 491, 555, 1011, 1188
ApaI	GGGCCC	1 cut(s)	447
ApeKI	GCWGC	3 cut(s)	730, 935, 1041
ApoI	RAATTY	1 cut(s)	853
Asp700I	GAANNNNTTC	2 cut(s)	392, 1287
AspA2I	CCTAGG	1 cut(s)	379
AspLEI	GCGC	3 cut(s)	427, 499, 562
AspS9I	GGNCC	4 cut(s)	443, 444, 718, 1189
AsuC2I	CCSGG	1 cut(s)	487
AsuHPI	GGTGA	2 cut(s)	307, 490
AvaII	GGWCC	1 cut(s)	718
AvrII	CCTAGG	1 cut(s)	379
BaeGI	GKGCMC	1 cut(s)	447
BamHI	GGATCC	1 cut(s)	1234
BanI	GGYRCC	2 cut(s)	778, 1204
BanII	GRGCYC	3 cut(s)	447, 543, 1107
BbsI	GAAGAC	1 cut(s)	842
BbvI	GCAGC	3 cut(s)	717, 947, 1053
BccI	CCATC	5 cut(s)	245, 517, 1088, 1126, 1294
BciT130I	CCWGG	2 cut(s)	1108, 1229
BclI	TGATCA	2 cut(s)	915, 1057
BcnI	CCSGG	1 cut(s)	487
BcoDI	GTCTC	5 cut(s)	55, 511, 788, 890, 1309
BcuI	ACTAGT	1 cut(s)	665
BfaI	CTAG	4 cut(s)	227, 380, 666, 939
BisI	GCNGC	8 cut(s)	370, 402, 428, 459, 558, 731, 936, 1042
BlnI	CCTAGG	1 cut(s)	379
BlsI	GCNGC	8 cut(s)	371, 403, 429, 460, 559, 732, 937, 1043
Bme1390I	CCNGG	3 cut(s)	487, 1108, 1229
Bme18I	GGWCC	1 cut(s)	718
BmgBI	CACGTC	1 cut(s)	313
BmgT120I	GGNCC	4 cut(s)	443, 444, 718, 1189
BmiI	GGNNCC	6 cut(s)	444, 445, 720, 780, 1206, 1236
BmrFI	CCNGG	3 cut(s)	487, 1108, 1229
BpiI	GAAGAC	1 cut(s)	842
BpuEI	CTTGAG	1 cut(s)	527
BpuMI	CCSGG	1 cut(s)	487
Bsa29I	ATCGAT	1 cut(s)	966
BsaHI	GRCGYC	2 cut(s)	411, 1318
BsaI	GGTCTC	1 cut(s)	511
BsaJI	CCNNGG	6 cut(s)	379, 453, 772, 840, 1106, 1107
BsaXI	ACNNNNNCTCC	6 cut(s)	24, 54, 260, 290, 866, 896
Bsc4I	CCNNNNNNNGG	3 cut(s)	381, 471, 1020
Bse118I	RCCGGY	1 cut(s)	493
Bse3DI	GCAATG	1 cut(s)	613
BseBI	CCWGG	2 cut(s)	1108, 1229
BseCI	ATCGAT	1 cut(s)	966
BseDI	CCNNGG	6 cut(s)	379, 453, 772, 840, 1106, 1107
BseGI	GGATG	4 cut(s)	84, 978, 1099, 1103
BseLI	CCNNNNNNNGG	3 cut(s)	381, 471, 1020
BseMI	GCAATG	1 cut(s)	613
BseMII	CTCAG	4 cut(s)	433, 603, 729, 1284
BseRI	GAGGAG	4 cut(s)	232, 262, 265, 542
BseSI	GKGCMC	1 cut(s)	447
BseXI	GCAGC	3 cut(s)	717, 947, 1053
BseYI	CCCAGC	1 cut(s)	629
BsgI	GTGCAG	1 cut(s)	1060
Bsh1236I	CGCG	2 cut(s)	560, 848
BshFI	GGCC	7 cut(s)	401, 445, 458, 493, 557, 1013, 1190
BshNI	GGYRCC	2 cut(s)	778, 1204
BshVI	ATCGAT	1 cut(s)	966
BsiSI	CCGG	3 cut(s)	28, 486, 494
BslFI	GGGAC	2 cut(s)	563, 676
BslI	CCNNNNNNNGG	3 cut(s)	381, 471, 1020
BsmAI	GTCTC	5 cut(s)	55, 511, 788, 890, 1309
BsmBI	CGTCTC	1 cut(s)	1309
BsmFI	GGGAC	2 cut(s)	563, 676
BsmI	GAATGC	1 cut(s)	733
BsnI	GGCC	7 cut(s)	401, 445, 458, 493, 557, 1013, 1190
Bso31I	GGTCTC	1 cut(s)	511
Bsp120I	GGGCCC	1 cut(s)	443
Bsp1286I	GDGCHC	3 cut(s)	447, 543, 1107
Bsp143I	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
Bsp19I	CCATGG	1 cut(s)	772
BspACI	CCGC	9 cut(s)	43, 357, 370, 402, 428, 440, 459, 503, 558
BspANI	GGCC	7 cut(s)	401, 445, 458, 493, 557, 1013, 1190
BspCNI	CTCAG	4 cut(s)	432, 604, 730, 1285
BspDI	ATCGAT	1 cut(s)	966
BspFNI	CGCG	2 cut(s)	560, 848
BspLI	GGNNCC	6 cut(s)	444, 445, 720, 780, 1206, 1236
BspPI	GGATC	2 cut(s)	1229, 1242
BspT107I	GGYRCC	2 cut(s)	778, 1204
BspTNI	GGTCTC	1 cut(s)	511
BsrDI	GCAATG	1 cut(s)	613
BsrFI	RCCGGY	1 cut(s)	493
BssAI	RCCGGY	1 cut(s)	493
BssECI	CCNNGG	6 cut(s)	379, 453, 772, 840, 1106, 1107
BssMI	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
BssNI	GRCGYC	2 cut(s)	411, 1318
BssT1I	CCWWGG	3 cut(s)	379, 453, 772
Bst2UI	CCWGG	2 cut(s)	1108, 1229
Bst4CI	ACNGT	1 cut(s)	376
Bst6I	CTCTTC	3 cut(s)	64, 193, 1304
BstACI	GRCGYC	2 cut(s)	411, 1318
BstC8I	GCNNGC	4 cut(s)	367, 495, 501, 604
BstDEI	CTNAG	5 cut(s)	419, 612, 738, 1263, 1293
BstDSI	CCRYGG	1 cut(s)	772
BstF5I	GGATG	4 cut(s)	84, 978, 1099, 1103
BstFNI	CGCG	2 cut(s)	560, 848
BstHHI	GCGC	3 cut(s)	427, 499, 562
BstKTI	GATC	5 cut(s)	918, 966, 1060, 1126, 1237
BstMAI	GTCTC	5 cut(s)	55, 511, 788, 890, 1309
BstMBI	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
BstMWI	GCNNNNNNNGC	4 cut(s)	28, 608, 677, 1166
BstNI	CCWGG	2 cut(s)	1108, 1229
BstSCI	CCNGG	3 cut(s)	485, 1106, 1227
BstSLI	GKGCMC	1 cut(s)	447
BstUI	CGCG	2 cut(s)	560, 848
BstV1I	GCAGC	3 cut(s)	717, 947, 1053
BstV2I	GAAGAC	1 cut(s)	842
BstX2I	RGATCY	1 cut(s)	1234
BstXI	CCANNNNNNTGG	1 cut(s)	454
BstYI	RGATCY	1 cut(s)	1234
Bsu15I	ATCGAT	1 cut(s)	966
BsuRI	GGCC	7 cut(s)	401, 445, 458, 493, 557, 1013, 1190
BsuTUI	ATCGAT	1 cut(s)	966
BtgI	CCRYGG	1 cut(s)	772
BtrI	CACGTC	1 cut(s)	313
BtsCI	GGATG	4 cut(s)	84, 978, 1099, 1103
BtsI	GCAGTG	1 cut(s)	1170
BtsIMutI	CAGTG	2 cut(s)	427, 1170
Cac8I	GCNNGC	4 cut(s)	367, 495, 501, 604
CfoI	GCGC	3 cut(s)	427, 499, 562
Cfr10I	RCCGGY	1 cut(s)	493
Cfr13I	GGNCC	4 cut(s)	443, 444, 718, 1189
ClaI	ATCGAT	1 cut(s)	966
CseI	GACGC	1 cut(s)	854
CsiI	ACCWGGT	1 cut(s)	1227
CviAII	CATG	4 cut(s)	407, 773, 1061, 1157
DdeI	CTNAG	5 cut(s)	419, 612, 738, 1263, 1293
DpnI	GATC	5 cut(s)	917, 965, 1059, 1125, 1236
DpnII	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
EaeI	YGGCCR	1 cut(s)	456
Eam1104I	CTCTTC	3 cut(s)	64, 193, 1304
EarI	CTCTTC	3 cut(s)	64, 193, 1304
EciI	GGCGGA	1 cut(s)	346
Eco130I	CCWWGG	3 cut(s)	379, 453, 772
Eco147I	AGGCCT	1 cut(s)	1013
Eco24I	GRGCYC	3 cut(s)	447, 543, 1107
Eco31I	GGTCTC	1 cut(s)	511
Eco47I	GGWCC	1 cut(s)	718
Eco57I	CTGAAG	1 cut(s)	1049
EcoO109I	RGGNCCY	2 cut(s)	443, 718
EcoRII	CCWGG	2 cut(s)	1106, 1227
EcoT14I	CCWWGG	3 cut(s)	379, 453, 772
EcoT38I	GRGCYC	3 cut(s)	447, 543, 1107
ErhI	CCWWGG	3 cut(s)	379, 453, 772
Esp3I	CGTCTC	1 cut(s)	1309
FaeI	CATG	4 cut(s)	410, 776, 1064, 1160
FalI	AAGNNNNNCTT	2 cut(s)	707, 739
FaqI	GGGAC	2 cut(s)	563, 676
FatI	CATG	4 cut(s)	406, 772, 1060, 1156
FauI	CCCGC	1 cut(s)	433
FbaI	TGATCA	2 cut(s)	915, 1057
FblI	GTMKAC	1 cut(s)	213
Fnu4HI	GCNGC	8 cut(s)	370, 402, 428, 459, 558, 731, 936, 1042
FokI	GGATG	4 cut(s)	71, 985, 1106, 1110
FriOI	GRGCYC	3 cut(s)	447, 543, 1107
Fsp4HI	GCNGC	8 cut(s)	370, 402, 428, 459, 558, 731, 936, 1042
FspBI	CTAG	4 cut(s)	227, 380, 666, 939
GlaI	GCGC	3 cut(s)	426, 498, 561
GluI	GCNGC	8 cut(s)	370, 402, 428, 459, 558, 731, 936, 1042
GsaI	CCCAGC	1 cut(s)	633
HaeIII	GGCC	7 cut(s)	401, 445, 458, 493, 557, 1013, 1190
HapII	CCGG	3 cut(s)	28, 486, 494
HgaI	GACGC	1 cut(s)	854
HhaI	GCGC	3 cut(s)	427, 499, 562
Hin1I	GRCGYC	2 cut(s)	411, 1318
Hin1II	CATG	4 cut(s)	410, 776, 1064, 1160
Hin6I	GCGC	3 cut(s)	425, 497, 560
HinP1I	GCGC	3 cut(s)	425, 497, 560
HincII	GTYRAC	1 cut(s)	214
HindII	GTYRAC	1 cut(s)	214
HindIII	AAGCTT	1 cut(s)	701
HinfI	GANTC	3 cut(s)	33, 218, 269
HpaII	CCGG	3 cut(s)	28, 486, 494
HphI	GGTGA	2 cut(s)	307, 490
Hpy166II	GTNNAC	1 cut(s)	214
Hpy188I	TCNGA	3 cut(s)	739, 1029, 1239
Hpy188III	TCNNGA	8 cut(s)	544, 686, 908, 919, 1001, 1078, 1114, 1292
Hpy8I	GTNNAC	1 cut(s)	214
Hpy99I	CGWCG	3 cut(s)	215, 218, 284
HpyAV	CCTTC	7 cut(s)	193, 260, 313, 336, 382, 1003, 1261
HpyCH4III	ACNGT	1 cut(s)	376
HpyCH4IV	ACGT	5 cut(s)	312, 411, 435, 902, 1318
HpyCH4V	TGCA	4 cut(s)	22, 708, 733, 1041
HpyF10VI	GCNNNNNNNGC	4 cut(s)	28, 608, 677, 1166
HpyF3I	CTNAG	5 cut(s)	419, 612, 738, 1263, 1293
HpySE526I	ACGT	5 cut(s)	312, 411, 435, 902, 1318
Hsp92I	GRCGYC	2 cut(s)	411, 1318
Hsp92II	CATG	4 cut(s)	410, 776, 1064, 1160
HspAI	GCGC	3 cut(s)	425, 497, 560
KroI	GCCGGC	1 cut(s)	493
KroNI	GCCGGC	1 cut(s)	495
Ksp22I	TGATCA	2 cut(s)	915, 1057
Kzo9I	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
LmnI	GCTCC	1 cut(s)	921
Lsp1109I	GCAGC	3 cut(s)	717, 947, 1053
MabI	ACCWGGT	1 cut(s)	1227
MaeI	CTAG	4 cut(s)	227, 380, 666, 939
MaeII	ACGT	5 cut(s)	312, 411, 435, 902, 1318
MaeIII	GTNAC	2 cut(s)	313, 1210
MalI	GATC	5 cut(s)	917, 965, 1059, 1125, 1236
MboI	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
MflI	RGATCY	1 cut(s)	1234
MhlI	GDGCHC	3 cut(s)	447, 543, 1107
MluCI	AATT	4 cut(s)	817, 853, 911, 1139
MluI	ACGCGT	1 cut(s)	846
MlyI	GAGTC	2 cut(s)	27, 263
MmeI	TCCRAC	1 cut(s)	92
MroNI	GCCGGC	1 cut(s)	493
MroXI	GAANNNNTTC	2 cut(s)	392, 1287
MseI	TTAA	1 cut(s)	1182
MslI	CAYNNNNRTG	1 cut(s)	1155
MspA1I	CMGCKG	1 cut(s)	45
MspI	CCGG	3 cut(s)	28, 486, 494
MspR9I	CCNGG	3 cut(s)	487, 1108, 1229
Mva1269I	GAATGC	1 cut(s)	733
MvaI	CCWGG	2 cut(s)	1108, 1229
MvnI	CGCG	2 cut(s)	560, 848
MwoI	GCNNNNNNNGC	4 cut(s)	28, 608, 677, 1166
NaeI	GCCGGC	1 cut(s)	495
NciI	CCSGG	1 cut(s)	487
NcoI	CCATGG	1 cut(s)	772
NdeII	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
NgoMIV	GCCGGC	1 cut(s)	493
NlaIII	CATG	4 cut(s)	410, 776, 1064, 1160
NlaIV	GGNNCC	6 cut(s)	444, 445, 720, 780, 1206, 1236
NmeAIII	GCCGAG	1 cut(s)	807
NmuCI	GTSAC	2 cut(s)	313, 1210
PasI	CCCWGGG	1 cut(s)	1107
PceI	AGGCCT	1 cut(s)	1013
PctI	GAATGC	1 cut(s)	733
PdiI	GCCGGC	1 cut(s)	495
PdmI	GAANNNNTTC	2 cut(s)	392, 1287
PfeI	GAWTC	1 cut(s)	218
PkrI	GCNGC	8 cut(s)	371, 403, 429, 460, 559, 732, 937, 1043
PleI	GAGTC	2 cut(s)	27, 263
PpsI	GAGTC	2 cut(s)	27, 263
PpuMI	RGGWCCY	1 cut(s)	718
Psp5II	RGGWCCY	1 cut(s)	718
Psp6I	CCWGG	2 cut(s)	1106, 1227
PspFI	CCCAGC	1 cut(s)	629
PspGI	CCWGG	2 cut(s)	1106, 1227
PspN4I	GGNNCC	6 cut(s)	444, 445, 720, 780, 1206, 1236
PspOMI	GGGCCC	1 cut(s)	443
PspPI	GGNCC	4 cut(s)	443, 444, 718, 1189
PspPPI	RGGWCCY	1 cut(s)	718
PsuI	RGATCY	1 cut(s)	1234
RseI	CAYNNNNRTG	1 cut(s)	1155
SalI	GTCGAC	1 cut(s)	212
SaqAI	TTAA	1 cut(s)	1182
SatI	GCNGC	8 cut(s)	370, 402, 428, 459, 558, 731, 936, 1042
Sau3AI	GATC	5 cut(s)	915, 963, 1057, 1123, 1234
Sau96I	GGNCC	4 cut(s)	443, 444, 718, 1189
SchI	GAGTC	2 cut(s)	27, 263
ScrFI	CCNGG	3 cut(s)	487, 1108, 1229
SduI	GDGCHC	3 cut(s)	447, 543, 1107
SexAI	ACCWGGT	1 cut(s)	1227
SgrDI	CGTCGACG	1 cut(s)	212
SinI	GGWCC	1 cut(s)	718
SmiMI	CAYNNNNRTG	1 cut(s)	1155
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
SpeI	ACTAGT	1 cut(s)	665
Sse9I	AATT	4 cut(s)	817, 853, 911, 1139
SseBI	AGGCCT	1 cut(s)	1013
SsiI	CCGC	9 cut(s)	43, 357, 370, 402, 428, 440, 459, 503, 558
SspMI	CTAG	4 cut(s)	227, 380, 666, 939
StuI	AGGCCT	1 cut(s)	1013
StyD4I	CCNGG	3 cut(s)	485, 1106, 1227
StyI	CCWWGG	3 cut(s)	379, 453, 772
TaaI	ACNGT	1 cut(s)	376
TaiI	ACGT	5 cut(s)	315, 414, 438, 905, 1321
TaqI	TCGA	3 cut(s)	213, 565, 966
TaqII	GACCGA	1 cut(s)	854
TasI	AATT	4 cut(s)	817, 853, 911, 1139
TauI	GCSGC	5 cut(s)	372, 404, 430, 461, 560
TfiI	GAWTC	1 cut(s)	218
Tru1I	TTAA	1 cut(s)	1182
Tru9I	TTAA	1 cut(s)	1182
TscAI	CASTG	2 cut(s)	427, 1177
TseFI	GTSAC	2 cut(s)	313, 1210
TseI	GCWGC	3 cut(s)	730, 935, 1041
Tsp45I	GTSAC	2 cut(s)	313, 1210
TspDTI	ATGAA	4 cut(s)	851, 972, 989, 1100
TspGWI	ACGGA	2 cut(s)	268, 331
TspRI	CASTG	2 cut(s)	427, 1177
VpaK11BI	GGWCC	1 cut(s)	718
XapI	RAATTY	1 cut(s)	853
XcmI	CCANNNNNNNNNTGG	1 cut(s)	472
XmaJI	CCTAGG	1 cut(s)	379
XmiI	GTMKAC	1 cut(s)	213
XmnI	GAANNNNTTC	2 cut(s)	392, 1287
XspI	CTAG	4 cut(s)	227, 380, 666, 939
ZraI	GACGTC	2 cut(s)	412, 1319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.