Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005657

Physical Location & Seq

Genomic Coordinates Forward (+)

17313247 .. 17317842

Gene Structure 4596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0199800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGTTTCATAGGAACTTACTACCATTGTTGTCAAAACAAGTCACCCTTCACCTTAAACCTCGTCTCACCCGAGCAATGAGCTCCCAGTTCCAGCTCCGAGTCAACCCACTCACCGGCAACTCGGAGTGGATCGTCATCGACGAAAACGAACCAGAAGGCCCAACTCCCAACACTTCCCAAAATGCCCTCCTCGCCACAACCTCGTACCTCGACATGCTCAACGACTCTCCGAGGAACAGAGCTTACCGCCAAGCCATAGACAAGACCGTAACTAAACCCTGCCGTGTTCTTGATATTGGCGCCGGAACTGGGTTGCTGTCGATGATGGCTGCGCGGGCAATGGGGTCGACGACATGTCGTATGGTGACTGCCTGTGAGTCTTACCTTCCAATGGTGAAACTAATGAAGAAGGTTCTGCGCTTGAACGACATGGAAAAGCAGATAAAACTGATCAACAAGCGTTCTGATGATCTCGAGTTGGGTGTTGATATCAATTCTCGCGCTCAAGTTGTTGTTAGTGAGATATTGGATTCAGAGTTGTTGGGTGAAGGGTTGATACCGTCTCTGCAACATGCGCATGACATGTTGTTGGTGGAGAGTCCTGAAACGGTGCCGTATAGAGCAACCACTTATGGCCAGTTGGTTGAGAGCACATTTTTGTGGAAGCTTCATGATTTACGCGGTAATGAGGCAGAAGCGTGTGATGGGATTCGTCTTGTTCCAACCGGGTTTGAGGATGTTTTGGGTGTTAAGCCGCAACAATATGCGTTTCATTGCGAGGCTATAGCAAATGAAGTGAAATTGCTGTCGGAACCCTTCAGGATCTTTGAATTTGATTTTTCGAAACGGCCAGAGAGTCGTGGAGAAACTGAGCTATCTATAAAGGCGACTAATGATGGTCGAGTTCATGCTGTAATTTCATGGTGGATACTTCAGCTTGATCGAGAAGGGACAATCTTTTATTCCACTGCCCCTAGGTGGATAAATTTGCCAGTCAACATTAGTCATGGGGATTGGTGTGACCATTGGAAACAGTGTGTTTGGTTTGTCCCTGGTGAAGGTATGTCCGTAAACAAGGATGAAGAAGTTTGTTTGCATGCTGTTCATACAGATATTAGCATCTCATATACTATCAAGAGCCCCGTATCAAGAAACAAGCGTGTGCAGTATGACTTAACTGGCAGGGATTTCAAGCTCATACTACCACCAGAAAGAATTGCAATTTATGGAGACAGTGTATGGAGGCATACCATGTTTAATGCAATAAGTAATGCGTTACAGGGAAGAGTTGATCCATTATGCATTGTTGCAGATGACAGCGTCTTCTTAACTCTACTCATTGCCCATCTTTCTAAAACATCACATGTGATATCATTTTTTCCGGGGTTGCAAGACAAGGGTTTGCAATATCTGCAAGCTGTCGCCAGTGCCAACAATTTCTCAGTGGATCGTGTAGAATATATTAAAAAGAAGAAAACTAAGTTAACTGTGCACGATACACATCAGAGAAAGGTTGACCTGTTGATTGCAGAACCTTTCTACTATGGAACAGATAGCATGCTTCCATGGCAGAATCTCCGGTTCTGGAATGAGCGGACAATGCTGGATTCTGTCCTATCAGAAGATGCATTGATAATGCCTTGTAAGGCAATATTGAAGGCTTGTGCATTGTCTATCCCTGATCTTTGGAATAGTCGTCGTAGTTTGAGTAAGATTGAAGGGTTTGACCATTCTGTTGTAAATTCCACCCTAGGGGCATGTGGTGAACTACCTGGGGAGCAAGAGGGTCCTTGTCTGCCCTATTTTATTTGGCAGTGCGGAAATGTTAAGAAACTCAGTGAAGCATTTACCGTCATGGAGTTTGATTTCTCAAAACCTATAATGCCATCTCATGGAAAAACCCAGGTTGAATTTACTGAGCCAGGGATATGCCACGGGTTTGCACTATGGATTGATTGGGTGATGGATTCAGAGAACTCCATTGTATTGTCTACAGGGCCAGATAAGAGGTATTGGAAGCAAGGAGTAAAGCTTCTGGCCAAGCCTGTGGGAGTTGGCAAAAGTTGTTCTTCTGCAGTGATTGAAGCTTCGTTTGACCCATCAAGTGGCGACCTGGACGTTAGACATGCTTTCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

712

Amino Acids

80.13

Weight (kDa)

6.16

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRMT_C	PF22528	265 - 380	4.8e-14	Arginine methyltransferase oligomerization subdomain
PRMT_C	PF22528	610 - 690	4.5e-07	Arginine methyltransferase oligomerization subdomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60960
fragaria_vesca	FvH4_5g29994 FvH4_5g29994 FvH4_5g29994 FvH4_7g15150
malus_domestica	MD06G1203500.v1.1 MD14G1214300.v1.1
prunus_persica	Prupe.5G207600_v2.0.a1
pyrus_communis	pycom06g18160 pycom14g17770 pycom16g18740
rosa_chinensis	RchiOBHm_Chr7g0224161 RchiOBHm_Chr7g0224171
rosa_laevigata	RLG00000001915
rosa_multiflora	Rmu_co8487915.1_g000001 Rmu_sc0008008.1_g000001 Rmu_sc0023501.1_g000005
rosa_roxburghii	Rroxscaffold_3G00235130 Rroxscaffold_3G00235140 Rroxscaffold_3G00235150
rosa_rugosa	Rorug07G0199800 Rorug07G0221500
rosa_samantha	Rh7AG365400 Rh7BG357100 Rh7CG384300 Rh7DG360200
rosa_wichuraiana	Rw7G030930 Rw7G030940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	576
AccB1I	GGYRCC	2 cut(s)	299, 610
AccB7I	CCANNNNNTGG	2 cut(s)	1892, 2105
AccBSI	CCGCTC	1 cut(s)	1594
AccI	GTMKAC	2 cut(s)	347, 1991
AccII	CGCG	3 cut(s)	334, 501, 681
AciI	CCGC	6 cut(s)	247, 334, 681, 755, 1594, 1818
AclWI	GGATC	4 cut(s)	137, 830, 1286, 1455
AcoI	YGGCCR	3 cut(s)	634, 848, 2037
AcsI	RAATTY	4 cut(s)	830, 985, 1741, 1910
AcuI	CTGAAG	2 cut(s)	802, 917
AcyI	GRCGYC	1 cut(s)	300
AfaI	GTAC	1 cut(s)	206
AfiI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
AflIII	ACRYGT	3 cut(s)	353, 582, 1363
AgsI	TTSAA	7 cut(s)	424, 830, 1192, 1657, 1718, 1910, 2084
AhdI	GACNNNNNGTC	1 cut(s)	354
AjnI	CCWGG	5 cut(s)	1051, 1771, 1902, 1921, 2112
Alw21I	GWGCWC	3 cut(s)	83, 653, 1494
Alw26I	GTCTC	3 cut(s)	68, 567, 1224
Alw44I	GTGCAC	1 cut(s)	1490
AlwI	GGATC	4 cut(s)	137, 830, 1286, 1455
Ama87I	CYCGRG	2 cut(s)	69, 473
AoxI	GGCC	5 cut(s)	157, 634, 848, 1997, 2037
ApaLI	GTGCAC	1 cut(s)	1490
ApeKI	GCWGC	1 cut(s)	329
ApoI	RAATTY	4 cut(s)	830, 985, 1741, 1910
AspA2I	CCTAGG	2 cut(s)	974, 1750
AspLEI	GCGC	5 cut(s)	302, 334, 420, 503, 577
AspS9I	GGNCC	3 cut(s)	158, 1787, 1997
AsuC2I	CCSGG	2 cut(s)	727, 1383
AsuII	TTCGAA	1 cut(s)	842
AvaI	CYCGRG	2 cut(s)	69, 473
AvaII	GGWCC	1 cut(s)	1787
AvrII	CCTAGG	2 cut(s)	974, 1750
BaeGI	GKGCMC	1 cut(s)	1494
BalI	TGGCCA	2 cut(s)	636, 2039
BanI	GGYRCC	2 cut(s)	299, 610
BanII	GRGCYC	2 cut(s)	83, 1142
BarI	GAAGNNNNNNTAC	2 cut(s)	540, 572
BbsI	GAAGAC	1 cut(s)	1315
Bbv12I	GWGCWC	3 cut(s)	83, 653, 1494
BbvI	GCAGC	1 cut(s)	316
BccI	CCATC	7 cut(s)	319, 698, 890, 1353, 1894, 1957, 2107
BceAI	ACGGC	3 cut(s)	267, 598, 863
BcgI	CGANNNNNNTGC	2 cut(s)	327, 361
BciT130I	CCWGG	5 cut(s)	1053, 1773, 1904, 1923, 2114
BciVI	GTATCC	1 cut(s)	921
BclI	TGATCA	1 cut(s)	450
BcnI	CCSGG	2 cut(s)	727, 1383
BcoDI	GTCTC	3 cut(s)	68, 567, 1224
BfaI	CTAG	2 cut(s)	975, 1751
BfmI	CTRYAG	3 cut(s)	783, 1992, 2073
BfoI	RGCGCY	1 cut(s)	303
BfuI	GTATCC	1 cut(s)	921
BisI	GCNGC	2 cut(s)	330, 755
BlnI	CCTAGG	2 cut(s)	974, 1750
BlsI	GCNGC	2 cut(s)	331, 756
Bme1390I	CCNGG	7 cut(s)	727, 1053, 1383, 1773, 1904, 1923, 2114
Bme18I	GGWCC	1 cut(s)	1787
BmeRI	GACNNNNNGTC	1 cut(s)	354
BmeT110I	CYCGRG	2 cut(s)	69, 473
BmgT120I	GGNCC	3 cut(s)	158, 1787, 1997
BmiI	GGNNCC	4 cut(s)	301, 612, 813, 1788
BmrFI	CCNGG	7 cut(s)	727, 1053, 1383, 1773, 1904, 1923, 2114
BmrI	ACTGGG	2 cut(s)	79, 318
BmsI	GCATC	2 cut(s)	1128, 1615
BmuI	ACTGGG	2 cut(s)	79, 318
BpiI	GAAGAC	1 cut(s)	1315
Bpu14I	TTCGAA	1 cut(s)	842
BpuEI	CTTGAG	1 cut(s)	489
BpuMI	CCSGG	2 cut(s)	727, 1383
BsaBI	GATNNNNATC	2 cut(s)	134, 1500
BsaHI	GRCGYC	1 cut(s)	300
BsaWI	WCCGGW	1 cut(s)	1578
BsaXI	ACNNNNNCTCC	2 cut(s)	1221, 1251
Bsc4I	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	6 cut(s)	85, 313, 637, 992, 1183, 1425
Bse3DI	GCAATG	4 cut(s)	81, 345, 772, 1338
Bse8I	GATNNNNATC	2 cut(s)	134, 1500
BseBI	CCWGG	5 cut(s)	1053, 1773, 1904, 1923, 2114
BseGI	GGATG	2 cut(s)	742, 1084
BseJI	GATNNNNATC	2 cut(s)	134, 1500
BseLI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
BseMI	GCAATG	4 cut(s)	81, 345, 772, 1338
BseMII	CTCAG	4 cut(s)	861, 1455, 1849, 1908
BseNI	ACTGG	6 cut(s)	85, 313, 637, 992, 1183, 1425
BseRI	GAGGAG	1 cut(s)	179
BseSI	GKGCMC	1 cut(s)	1494
BseXI	GCAGC	1 cut(s)	316
BsgI	GTGCAG	1 cut(s)	1184
Bsh1236I	CGCG	3 cut(s)	334, 501, 681
BshFI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BshNI	GGYRCC	2 cut(s)	299, 610
BsiHKAI	GWGCWC	3 cut(s)	83, 653, 1494
BsiHKCI	CYCGRG	2 cut(s)	69, 473
BsiSI	CCGG	5 cut(s)	114, 303, 726, 1382, 1579
BslFI	GGGAC	2 cut(s)	964, 1034
BslI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
BsmAI	GTCTC	3 cut(s)	68, 567, 1224
BsmBI	CGTCTC	2 cut(s)	68, 567
BsmFI	GGGAC	2 cut(s)	964, 1034
BsnI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BsoBI	CYCGRG	2 cut(s)	69, 473
Bsp119I	TTCGAA	1 cut(s)	842
Bsp1286I	GDGCHC	4 cut(s)	83, 653, 1142, 1494
Bsp143I	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
Bsp19I	CCATGG	1 cut(s)	1565
BspACI	CCGC	6 cut(s)	247, 334, 681, 755, 1594, 1818
BspANI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BspCNI	CTCAG	4 cut(s)	862, 1454, 1848, 1909
BspFNI	CGCG	3 cut(s)	334, 501, 681
BspHI	TCATGA	1 cut(s)	670
BspLI	GGNNCC	4 cut(s)	301, 612, 813, 1788
BspMAI	CTGCAG	1 cut(s)	2077
BspPI	GGATC	4 cut(s)	137, 830, 1286, 1455
BspT104I	TTCGAA	1 cut(s)	842
BspT107I	GGYRCC	2 cut(s)	299, 610
BsrBI	CCGCTC	1 cut(s)	1594
BsrDI	GCAATG	4 cut(s)	81, 345, 772, 1338
BsrFI	RCCGGY	1 cut(s)	113
BsrI	ACTGG	6 cut(s)	85, 313, 637, 992, 1183, 1425
BssAI	RCCGGY	1 cut(s)	113
BssMI	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
BssNI	GRCGYC	1 cut(s)	300
BssT1I	CCWWGG	3 cut(s)	974, 1565, 1750
Bst2UI	CCWGG	5 cut(s)	1053, 1773, 1904, 1923, 2114
Bst4CI	ACNGT	7 cut(s)	268, 561, 610, 1035, 1235, 1489, 1852
Bst6I	CTCTTC	1 cut(s)	1279
BstACI	GRCGYC	1 cut(s)	300
BstAPI	GCANNNNNTGC	1 cut(s)	1411
BstBI	TTCGAA	1 cut(s)	842
BstC8I	GCNNGC	4 cut(s)	336, 1098, 1416, 1559
BstDEI	CTNAG	5 cut(s)	870, 1441, 1479, 1835, 1917
BstDSI	CCRYGG	2 cut(s)	1565, 1933
BstENI	CCTNNNNNAGG	1 cut(s)	1056
BstF5I	GGATG	2 cut(s)	742, 1084
BstFNI	CGCG	3 cut(s)	334, 501, 681
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	5 cut(s)	302, 334, 420, 503, 577
BstKTI	GATC	8 cut(s)	132, 453, 472, 825, 943, 1294, 1450, 1684
BstMAI	GTCTC	3 cut(s)	68, 567, 1224
BstMBI	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
BstMWI	GCNNNNNNNGC	6 cut(s)	191, 335, 574, 1411, 1567, 1600
BstNI	CCWGG	5 cut(s)	1053, 1773, 1904, 1923, 2114
BstNSI	RCATGY	9 cut(s)	217, 357, 575, 586, 1100, 1367, 1561, 1761, 2129
BstSCI	CCNGG	7 cut(s)	725, 1051, 1381, 1771, 1902, 1921, 2112
BstSFI	CTRYAG	3 cut(s)	783, 1992, 2073
BstSLI	GKGCMC	1 cut(s)	1494
BstUI	CGCG	3 cut(s)	334, 501, 681
BstV1I	GCAGC	1 cut(s)	316
BstV2I	GAAGAC	1 cut(s)	1315
BstX2I	RGATCY	1 cut(s)	822
BstXI	CCANNNNNNTGG	1 cut(s)	2047
BstYI	RGATCY	1 cut(s)	822
BsuI	GTATCC	1 cut(s)	921
BsuRI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BtgI	CCRYGG	2 cut(s)	1565, 1933
BtsCI	GGATG	2 cut(s)	742, 1084
BtsI	GCAGTG	3 cut(s)	966, 1820, 2082
BtsIMutI	CAGTG	8 cut(s)	966, 1040, 1240, 1432, 1449, 1820, 1843, 2082
Cac8I	GCNNGC	4 cut(s)	336, 1098, 1416, 1559
CciI	TCATGA	1 cut(s)	670
CfoI	GCGC	5 cut(s)	302, 334, 420, 503, 577
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	3 cut(s)	158, 1787, 1997
CseI	GACGC	1 cut(s)	1309
Csp6I	GTAC	1 cut(s)	205
CviQI	GTAC	1 cut(s)	205
DdeI	CTNAG	5 cut(s)	870, 1441, 1479, 1835, 1917
DinI	GGCGCC	1 cut(s)	301
DpnI	GATC	8 cut(s)	131, 452, 471, 824, 942, 1293, 1449, 1683
DpnII	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
DriI	GACNNNNNGTC	1 cut(s)	354
EaeI	YGGCCR	3 cut(s)	634, 848, 2037
Eam1104I	CTCTTC	1 cut(s)	1279
Eam1105I	GACNNNNNGTC	1 cut(s)	354
EarI	CTCTTC	1 cut(s)	1279
Ecl136II	GAGCTC	1 cut(s)	81
Eco130I	CCWWGG	3 cut(s)	974, 1565, 1750
Eco24I	GRGCYC	2 cut(s)	83, 1142
Eco32I	GATATC	2 cut(s)	490, 1371
Eco47I	GGWCC	1 cut(s)	1787
Eco53kI	GAGCTC	1 cut(s)	81
Eco57I	CTGAAG	2 cut(s)	802, 917
Eco88I	CYCGRG	2 cut(s)	69, 473
EcoICRI	GAGCTC	1 cut(s)	81
EcoNI	CCTNNNNNAGG	1 cut(s)	1056
EcoO109I	RGGNCCY	1 cut(s)	1787
EcoRII	CCWGG	5 cut(s)	1051, 1771, 1902, 1921, 2112
EcoRV	GATATC	2 cut(s)	490, 1371
EcoT14I	CCWWGG	3 cut(s)	974, 1565, 1750
EcoT22I	ATGCAT	2 cut(s)	1304, 1630
EcoT38I	GRGCYC	2 cut(s)	83, 1142
EgeI	GGCGCC	1 cut(s)	301
EheI	GGCGCC	1 cut(s)	301
ErhI	CCWWGG	3 cut(s)	974, 1565, 1750
Esp3I	CGTCTC	2 cut(s)	68, 567
FalI	AAGNNNNNCTT	4 cut(s)	30, 62, 2053, 2085
FaqI	GGGAC	2 cut(s)	964, 1034
FauI	CCCGC	1 cut(s)	327
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	2 cut(s)	347, 1991
Fnu4HI	GCNGC	2 cut(s)	330, 755
FokI	GGATG	2 cut(s)	749, 1091
FriOI	GRGCYC	2 cut(s)	83, 1142
Fsp4HI	GCNGC	2 cut(s)	330, 755
FspAI	RTGCGCAY	1 cut(s)	576
FspBI	CTAG	2 cut(s)	975, 1751
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	5 cut(s)	301, 333, 419, 502, 576
GluI	GCNGC	2 cut(s)	330, 755
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
HapII	CCGG	5 cut(s)	114, 303, 726, 1382, 1579
HgaI	GACGC	1 cut(s)	1309
HhaI	GCGC	5 cut(s)	302, 334, 420, 503, 577
Hin1I	GRCGYC	1 cut(s)	300
Hin6I	GCGC	5 cut(s)	300, 332, 418, 501, 575
HinP1I	GCGC	5 cut(s)	300, 332, 418, 501, 575
HincII	GTYRAC	5 cut(s)	103, 348, 997, 1485, 1516
HindII	GTYRAC	5 cut(s)	103, 348, 997, 1485, 1516
HindIII	AAGCTT	3 cut(s)	665, 2030, 2085
HpaI	GTTAAC	1 cut(s)	1485
HpaII	CCGG	5 cut(s)	114, 303, 726, 1382, 1579
Hpy166II	GTNNAC	9 cut(s)	103, 348, 997, 1072, 1485, 1492, 1516, 1766, 1992
Hpy188I	TCNGA	9 cut(s)	98, 124, 231, 466, 535, 811, 1506, 1621, 1972
Hpy188III	TCNNGA	9 cut(s)	290, 473, 602, 671, 820, 944, 1135, 1149, 1585
Hpy8I	GTNNAC	9 cut(s)	103, 348, 997, 1072, 1485, 1492, 1516, 1766, 1992
Hpy99I	CGWCG	3 cut(s)	143, 352, 1701
HpyCH4III	ACNGT	7 cut(s)	268, 561, 610, 1035, 1235, 1489, 1852
HpyCH4IV	ACGT	1 cut(s)	2118
HpyF10VI	GCNNNNNNNGC	6 cut(s)	191, 335, 574, 1411, 1567, 1600
HpyF3I	CTNAG	5 cut(s)	870, 1441, 1479, 1835, 1917
HpySE526I	ACGT	1 cut(s)	2118
Hsp92I	GRCGYC	1 cut(s)	300
HspAI	GCGC	5 cut(s)	300, 332, 418, 501, 575
KasI	GGCGCC	1 cut(s)	299
Ksp22I	TGATCA	1 cut(s)	450
KspAI	GTTAAC	1 cut(s)	1485
Kzo9I	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
LmnI	GCTCC	3 cut(s)	86, 99, 1777
Lsp1109I	GCAGC	1 cut(s)	316
LweI	GCATC	2 cut(s)	1128, 1615
MaeI	CTAG	2 cut(s)	975, 1751
MaeII	ACGT	1 cut(s)	2118
MaeIII	GTNAC	5 cut(s)	40, 268, 364, 1019, 1275
MalI	GATC	8 cut(s)	131, 452, 471, 824, 942, 1293, 1449, 1683
MbiI	CCGCTC	1 cut(s)	1594
MboI	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
MboII	GAAGA	7 cut(s)	418, 1094, 1296, 1315, 1483, 1634, 2061
MflI	RGATCY	1 cut(s)	822
MhlI	GDGCHC	4 cut(s)	83, 653, 1142, 1494
MlsI	TGGCCA	2 cut(s)	636, 2039
MluNI	TGGCCA	2 cut(s)	636, 2039
Mly113I	GGCGCC	1 cut(s)	300
MlyI	GAGTC	5 cut(s)	108, 218, 386, 607, 865
MmeI	TCCRAC	2 cut(s)	746, 789
Mox20I	TGGCCA	2 cut(s)	636, 2039
Mph1103I	ATGCAT	2 cut(s)	1304, 1630
MscI	TGGCCA	2 cut(s)	636, 2039
MseI	TTAA	8 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1827
MslI	CAYNNNNRTG	2 cut(s)	576, 658
Msp20I	TGGCCA	2 cut(s)	636, 2039
MspI	CCGG	5 cut(s)	114, 303, 726, 1382, 1579
MspR9I	CCNGG	7 cut(s)	727, 1053, 1383, 1773, 1904, 1923, 2114
MvaI	CCWGG	5 cut(s)	1053, 1773, 1904, 1923, 2114
MvnI	CGCG	3 cut(s)	334, 501, 681
MwoI	GCNNNNNNNGC	6 cut(s)	191, 335, 574, 1411, 1567, 1600
NarI	GGCGCC	1 cut(s)	300
NciI	CCSGG	2 cut(s)	727, 1383
NcoI	CCATGG	1 cut(s)	1565
NdeII	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
NlaIV	GGNNCC	4 cut(s)	301, 612, 813, 1788
NmuCI	GTSAC	3 cut(s)	40, 364, 1019
NsbI	TGCGCA	1 cut(s)	576
NsiI	ATGCAT	2 cut(s)	1304, 1630
NspI	RCATGY	9 cut(s)	217, 357, 575, 586, 1100, 1367, 1561, 1761, 2129
NspV	TTCGAA	1 cut(s)	842
PaeI	GCATGC	2 cut(s)	1100, 1561
PaeR7I	CTCGAG	1 cut(s)	473
PagI	TCATGA	1 cut(s)	670
PciI	ACATGT	3 cut(s)	353, 582, 1363
PcsI	WCGNNNNNNNCGW	3 cut(s)	67, 138, 144
PfeI	GAWTC	5 cut(s)	530, 709, 1573, 1607, 1967
PflFI	GACNNNGTC	1 cut(s)	1319
PflMI	CCANNNNNTGG	2 cut(s)	1892, 2105
PkrI	GCNGC	2 cut(s)	331, 756
PleI	GAGTC	5 cut(s)	107, 218, 385, 606, 864
PluTI	GGCGCC	1 cut(s)	303
PpsI	GAGTC	5 cut(s)	107, 218, 385, 606, 864
PpuMI	RGGWCCY	1 cut(s)	1787
PscI	ACATGT	3 cut(s)	353, 582, 1363
Psp124BI	GAGCTC	1 cut(s)	83
Psp5II	RGGWCCY	1 cut(s)	1787
Psp6I	CCWGG	5 cut(s)	1051, 1771, 1902, 1921, 2112
PspGI	CCWGG	5 cut(s)	1051, 1771, 1902, 1921, 2112
PspN4I	GGNNCC	4 cut(s)	301, 612, 813, 1788
PspPI	GGNCC	3 cut(s)	158, 1787, 1997
PspPPI	RGGWCCY	1 cut(s)	1787
PsrI	GAACNNNNNNTAC	2 cut(s)	227, 259
PstI	CTGCAG	1 cut(s)	2077
PsuI	RGATCY	1 cut(s)	822
PsyI	GACNNNGTC	1 cut(s)	1319
RsaI	GTAC	1 cut(s)	206
RsaNI	GTAC	1 cut(s)	205
RseI	CAYNNNNRTG	2 cut(s)	576, 658
SacI	GAGCTC	1 cut(s)	83
SalI	GTCGAC	1 cut(s)	346
SaqAI	TTAA	8 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1827
SatI	GCNGC	2 cut(s)	330, 755
Sau3AI	GATC	8 cut(s)	129, 450, 469, 822, 940, 1291, 1447, 1681
Sau96I	GGNCC	3 cut(s)	158, 1787, 1997
SchI	GAGTC	5 cut(s)	108, 218, 386, 607, 865
ScrFI	CCNGG	7 cut(s)	727, 1053, 1383, 1773, 1904, 1923, 2114
SduI	GDGCHC	4 cut(s)	83, 653, 1142, 1494
SfaNI	GCATC	2 cut(s)	1128, 1615
SfcI	CTRYAG	3 cut(s)	783, 1992, 2073
SfoI	GGCGCC	1 cut(s)	301
Sfr274I	CTCGAG	1 cut(s)	473
SfuI	TTCGAA	1 cut(s)	842
SinI	GGWCC	1 cut(s)	1787
SlaI	CTCGAG	1 cut(s)	473
SmiMI	CAYNNNNRTG	2 cut(s)	576, 658
SmlI	CTYRAG	2 cut(s)	473, 504
SmoI	CTYRAG	2 cut(s)	473, 504
SphI	GCATGC	2 cut(s)	1100, 1561
SsiI	CCGC	6 cut(s)	247, 334, 681, 755, 1594, 1818
SspDI	GGCGCC	1 cut(s)	299
SspI	AATATT	1 cut(s)	1653
SspMI	CTAG	2 cut(s)	975, 1751
SstI	GAGCTC	1 cut(s)	83
StyD4I	CCNGG	7 cut(s)	725, 1051, 1381, 1771, 1902, 1921, 2112
StyI	CCWWGG	3 cut(s)	974, 1565, 1750
TaaI	ACNGT	7 cut(s)	268, 561, 610, 1035, 1235, 1489, 1852
TaiI	ACGT	1 cut(s)	2121
TaqI	TCGA	8 cut(s)	138, 210, 320, 347, 474, 842, 901, 943
TauI	GCSGC	1 cut(s)	757
TfiI	GAWTC	5 cut(s)	530, 709, 1573, 1607, 1967
Tru1I	TTAA	8 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1827
Tru9I	TTAA	8 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1827
TscAI	CASTG	8 cut(s)	973, 1040, 1240, 1432, 1449, 1820, 1843, 2082
TseFI	GTSAC	3 cut(s)	40, 364, 1019
TseI	GCWGC	1 cut(s)	329
Tsp45I	GTSAC	3 cut(s)	40, 364, 1019
TspDTI	ATGAA	8 cut(s)	419, 659, 761, 807, 896, 909, 1094, 1095
TspGWI	ACGGA	1 cut(s)	1057
TspRI	CASTG	8 cut(s)	973, 1040, 1240, 1432, 1449, 1820, 1843, 2082
Tth111I	GACNNNGTC	1 cut(s)	1319
Van91I	CCANNNNNTGG	2 cut(s)	1892, 2105
VneI	GTGCAC	1 cut(s)	1490
VpaK11BI	GGWCC	1 cut(s)	1787
XagI	CCTNNNNNAGG	1 cut(s)	1056
XapI	RAATTY	4 cut(s)	830, 985, 1741, 1910
XceI	RCATGY	9 cut(s)	217, 357, 575, 586, 1100, 1367, 1561, 1761, 2129
XhoI	CTCGAG	1 cut(s)	473
XmaJI	CCTAGG	2 cut(s)	974, 1750
XmiI	GTMKAC	2 cut(s)	347, 1991
XspI	CTAG	2 cut(s)	975, 1751
Zsp2I	ATGCAT	2 cut(s)	1304, 1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.