Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0005657

Physical Location & Seq

Genomic Coordinates Reverse (-)

47978249 .. 47979820

Gene Structure 1572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG360200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGAGGTCTTTGAAGCCTCTGCAACTCCGGCGACTCCTACTCCGCTCTCTTTCCACCTCTTCTTCTCCAACCATCCAAACCCTCATCCCATTTCCCTCAACCAAACCCACCCACCATATCCCCAGCTCAATCACCACCACCTCTCACTTTCTCTCTCTACCCCATTTCTCTCTCCTCAAATCCTTCTCTTCTTCCTCATCCCCACCACCCCTCGACGAATCCCAACTGGCCCAATCCATCTCCTCCCACCTTCTCCACCACCAACCCCACTCCTCCTCCGATCCCCTCTCCGTCGCCCAAGCCCTCCAATCCACCTTCCCTCACGTCACCCCCACCCCTTCTCTGCTCCTCGCCGTCCTCAACCTCTCCGCCGAAGCCGGCCGCACCGTCCTAGGCTTCAACCACTGGCTCATCCAGAACCCTAATTTCCACCACACCGACGACACCCTCTCCTACTTTGTCGACTACTTCGGCAGAAGGAAGGATTTCAAGGCCGCCCATGACGTCATTCTCACTGCGCCGCGTGACGTTGCCGGGCCCAAGACCTTGGCCGCCTCCATTGACAGGCTGGTGAGAGCCGGGAGGCCGGCGCAGGCGGTCTCTTTCTTTGAGAAGATGGAGGAGGACTATGGGCTCAAGAGGGACAAGGCGGCGCATCGATTGGTTGTGGAGAAGCTCTGCGAGAATGGGTTTGCCAGCAATGCTGAGAAGATGGTGAAAGGTTTGGTGAATGAGTTTTTCCCTGATGAGTATGTTTGCGATTTGCTTATTAAGGGGTGGTGTGTGGATGGGAAGCTTGAGGAGGCTAGGAGATTGGCTGGGGAGATGTATAGGGGAGGGTTTGAGATTGGGACTAGTGCTTTCAATGCCATTCTTGATTGCGTGTGTAAGCTTTGCAGGAAAAAGGACCCCTTTCGGCTGCATTCCGAGGCTGAGCAGATTTTGGTGGATATGGACTTCCATGGGGTGCCGAGAAATGTGGAGACTTTCAATGTGCTGATTACTAATTTGTGTAAGATTAGGAAGACCGAGGATGCGTTGAATTTGTTTCATAGAATGGGGGAGTGGGGTTGTTCTCCTAACGAGACTACGTTTCTTGAATTGATCAGGAGCTTGTATCAGGCAGCTAGGGTTGGGGAGGGAGATGAAATGATTGATAGGATGAAATCAGCGGGGTTCGGGGAGGCTCTTGATAAGAAAGCCTATTTTGGGTTTCTGAAGATTTTGTGCGGCATTGAGAGGATTGATCATGCTTTGTCTGTTTTCAAGAAATTGAAGCAGGATGGATGTGAGCCCGGGGTCAAGAGTTATGATCTGCTGATGGGAAAATTGTATGCTCACAACCGTGCTGATAGAGCCACTGCCCTGTTTAATGAGGCCCAAAAGAAAGGGGTGCCTCTGACACACAAGACATACCAGGTGGATCCAAAATACTTGAAGAAGCCAAAGGCTAAGAAGGAGAATACAAGGGAAACACTTCCTGAGAAGATGGCAAGGAAGAGGAGACGTCTTAAGCAAATTCGATTGAGCTTTGTTAAGAAGCCCAAAAAGGGAATGCGCCGAGCCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

523

Amino Acids

59.05

Weight (kDa)

9.49

Isoelectric Point (pI)

39.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	314 - 369	2.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	326 - 372	6.1e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60960
fragaria_vesca	FvH4_5g29994 FvH4_5g29994 FvH4_5g29994 FvH4_7g15150
malus_domestica	MD06G1203500.v1.1 MD14G1214300.v1.1
prunus_persica	Prupe.5G207600_v2.0.a1
pyrus_communis	pycom06g18160 pycom14g17770 pycom16g18740
rosa_chinensis	RchiOBHm_Chr7g0224161 RchiOBHm_Chr7g0224171
rosa_laevigata	RLG00000001915
rosa_multiflora	Rmu_co8487915.1_g000001 Rmu_sc0008008.1_g000001 Rmu_sc0023501.1_g000005
rosa_roxburghii	Rroxscaffold_3G00235130 Rroxscaffold_3G00235140 Rroxscaffold_3G00235150
rosa_rugosa	Rorug07G0199800 Rorug07G0221500
rosa_samantha	Rh7AG365400 Rh7BG357100 Rh7CG384300 Rh7DG360200
rosa_wichuraiana	Rw7G030930 Rw7G030940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	507, 1510
AccB1I	GGYRCC	2 cut(s)	967, 1393
AccBSI	CCGCTC	1 cut(s)	45
AccI	GTMKAC	1 cut(s)	462
AccII	CGCG	1 cut(s)	523
AclWI	GGATC	3 cut(s)	275, 1418, 1431
AcoI	YGGCCR	2 cut(s)	379, 549
AcsI	RAATTY	2 cut(s)	1042, 1518
AcuI	CTGAAG	1 cut(s)	1238
AcyI	GRCGYC	2 cut(s)	504, 1507
AfiI	CCNNNNNNNGG	3 cut(s)	564, 1209, 1550
AflII	CTTAAG	1 cut(s)	1511
AhlI	ACTAGT	1 cut(s)	854
AjiI	CACGTC	1 cut(s)	325
AjnI	CCWGG	1 cut(s)	1416
AleI	CACNNNNGTG	1 cut(s)	1344
AluBI	AGCT	7 cut(s)	126, 676, 796, 892, 1113, 1127, 1530
AluI	AGCT	7 cut(s)	126, 676, 796, 892, 1113, 1127, 1530
Alw26I	GTCTC	4 cut(s)	604, 977, 1079, 1498
AlwI	GGATC	3 cut(s)	275, 1418, 1431
Ama87I	CYCGRG	1 cut(s)	1295
AoxI	GGCC	7 cut(s)	228, 379, 492, 536, 549, 584, 1377
ApaI	GGGCCC	1 cut(s)	540
ApeKI	GCWGC	2 cut(s)	919, 1124
ApoI	RAATTY	2 cut(s)	1042, 1518
Asp700I	GAANNNNTTC	2 cut(s)	485, 1476
AspA2I	CCTAGG	1 cut(s)	391
AspLEI	GCGC	4 cut(s)	520, 592, 655, 1560
AspS9I	GGNCC	5 cut(s)	229, 536, 537, 907, 1378
AsuC2I	CCSGG	4 cut(s)	535, 580, 1296, 1297
AsuHPI	GGTGA	5 cut(s)	124, 319, 583, 727, 739
AvaI	CYCGRG	1 cut(s)	1295
AvaII	GGWCC	1 cut(s)	907
AvrII	CCTAGG	1 cut(s)	391
BaeGI	GKGCMC	1 cut(s)	540
BamHI	GGATCC	1 cut(s)	1423
BanI	GGYRCC	2 cut(s)	967, 1393
BanII	GRGCYC	3 cut(s)	540, 636, 1296
BbsI	GAAGAC	1 cut(s)	1031
BbvI	GCAGC	2 cut(s)	906, 1136
BccI	CCATC	8 cut(s)	80, 245, 610, 706, 782, 1277, 1315, 1483
BceAI	ACGGC	1 cut(s)	338
BciT130I	CCWGG	1 cut(s)	1418
BclI	TGATCA	2 cut(s)	1104, 1246
BcnI	CCSGG	4 cut(s)	535, 580, 1296, 1297
BcoDI	GTCTC	4 cut(s)	604, 977, 1079, 1498
BcuI	ACTAGT	1 cut(s)	854
BfaI	CTAG	4 cut(s)	392, 807, 855, 1128
BfrI	CTTAAG	1 cut(s)	1511
BisI	GCNGC	8 cut(s)	382, 495, 521, 552, 651, 920, 1125, 1231
BlnI	CCTAGG	1 cut(s)	391
BlpI	GCTNAGC	1 cut(s)	933
BlsI	GCNGC	8 cut(s)	383, 496, 522, 553, 652, 921, 1126, 1232
Bme1390I	CCNGG	5 cut(s)	535, 580, 1296, 1297, 1418
Bme18I	GGWCC	1 cut(s)	907
BmeT110I	CYCGRG	1 cut(s)	1295
BmgBI	CACGTC	1 cut(s)	325
BmgT120I	GGNCC	5 cut(s)	229, 536, 537, 907, 1378
BmiI	GGNNCC	5 cut(s)	538, 909, 969, 1395, 1425
BmrFI	CCNGG	5 cut(s)	535, 580, 1296, 1297, 1418
BmsI	GCATC	2 cut(s)	664, 1024
BpiI	GAAGAC	1 cut(s)	1031
Bpu1102I	GCTNAGC	1 cut(s)	933
BpuEI	CTTGAG	2 cut(s)	620, 818
BpuMI	CCSGG	4 cut(s)	535, 580, 1296, 1297
Bsa29I	ATCGAT	1 cut(s)	658
BsaHI	GRCGYC	2 cut(s)	504, 1507
BsaI	GGTCTC	1 cut(s)	604
BsaJI	CCNNGG	7 cut(s)	391, 546, 927, 961, 1029, 1295, 1296
BsaXI	ACNNNNNCTCC	6 cut(s)	24, 54, 260, 290, 434, 464
Bsc4I	CCNNNNNNNGG	3 cut(s)	564, 1209, 1550
Bse118I	RCCGGY	2 cut(s)	377, 586
Bse1I	ACTGG	2 cut(s)	231, 410
Bse3DI	GCAATG	1 cut(s)	706
BseBI	CCWGG	1 cut(s)	1418
BseCI	ATCGAT	1 cut(s)	658
BseDI	CCNNGG	7 cut(s)	391, 546, 927, 961, 1029, 1295, 1296
BseGI	GGATG	9 cut(s)	72, 84, 197, 411, 793, 1039, 1167, 1288, 1292
BseLI	CCNNNNNNNGG	3 cut(s)	564, 1209, 1550
BseMI	GCAATG	1 cut(s)	706
BseMII	CTCAG	3 cut(s)	696, 924, 1473
BseNI	ACTGG	2 cut(s)	231, 410
BseRI	GAGGAG	8 cut(s)	164, 232, 262, 265, 338, 635, 815, 1516
BseSI	GKGCMC	1 cut(s)	540
BseX3I	CGGCCG	1 cut(s)	379
BseXI	GCAGC	2 cut(s)	906, 1136
BseYI	CCCAGC	2 cut(s)	122, 818
Bsh1236I	CGCG	1 cut(s)	523
Bsh1285I	CGRYCG	1 cut(s)	382
BshFI	GGCC	7 cut(s)	230, 381, 494, 538, 551, 586, 1379
BshNI	GGYRCC	2 cut(s)	967, 1393
BshVI	ATCGAT	1 cut(s)	658
BsiEI	CGRYCG	1 cut(s)	382
BsiHKCI	CYCGRG	1 cut(s)	1295
BsiSI	CCGG	6 cut(s)	28, 378, 534, 579, 587, 1296
BslFI	GGGAC	2 cut(s)	656, 865
BslI	CCNNNNNNNGG	3 cut(s)	564, 1209, 1550
BsmAI	GTCTC	4 cut(s)	604, 977, 1079, 1498
BsmBI	CGTCTC	1 cut(s)	1498
BsmFI	GGGAC	2 cut(s)	656, 865
BsmI	GAATGC	2 cut(s)	922, 1560
BsnI	GGCC	7 cut(s)	230, 381, 494, 538, 551, 586, 1379
Bso31I	GGTCTC	1 cut(s)	604
BsoBI	CYCGRG	1 cut(s)	1295
Bsp120I	GGGCCC	1 cut(s)	536
Bsp1286I	GDGCHC	3 cut(s)	540, 636, 1296
Bsp143I	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
Bsp1720I	GCTNAGC	1 cut(s)	933
Bsp19I	CCATGG	1 cut(s)	961
BspANI	GGCC	7 cut(s)	230, 381, 494, 538, 551, 586, 1379
BspCNI	CTCAG	3 cut(s)	697, 925, 1474
BspDI	ATCGAT	1 cut(s)	658
BspFNI	CGCG	1 cut(s)	523
BspLI	GGNNCC	5 cut(s)	538, 909, 969, 1395, 1425
BspPI	GGATC	3 cut(s)	275, 1418, 1431
BspT107I	GGYRCC	2 cut(s)	967, 1393
BspTI	CTTAAG	1 cut(s)	1511
BspTNI	GGTCTC	1 cut(s)	604
BsrBI	CCGCTC	1 cut(s)	45
BsrDI	GCAATG	1 cut(s)	706
BsrFI	RCCGGY	2 cut(s)	377, 586
BsrI	ACTGG	2 cut(s)	231, 410
BssAI	RCCGGY	2 cut(s)	377, 586
BssECI	CCNNGG	7 cut(s)	391, 546, 927, 961, 1029, 1295, 1296
BssMI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
BssNI	GRCGYC	2 cut(s)	504, 1507
BssT1I	CCWWGG	3 cut(s)	391, 546, 961
Bst2UI	CCWGG	1 cut(s)	1418
Bst4CI	ACNGT	2 cut(s)	388, 1346
Bst6I	CTCTTC	3 cut(s)	64, 193, 1493
BstACI	GRCGYC	2 cut(s)	504, 1507
BstAFI	CTTAAG	1 cut(s)	1511
BstC8I	GCNNGC	4 cut(s)	379, 588, 594, 697
BstDEI	CTNAG	4 cut(s)	705, 933, 1452, 1482
BstDSI	CCRYGG	1 cut(s)	961
BstF5I	GGATG	9 cut(s)	72, 84, 197, 411, 793, 1039, 1167, 1288, 1292
BstFNI	CGCG	1 cut(s)	523
BstHHI	GCGC	4 cut(s)	520, 592, 655, 1560
BstKTI	GATC	5 cut(s)	283, 1107, 1249, 1315, 1426
BstMAI	GTCTC	4 cut(s)	604, 977, 1079, 1498
BstMBI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
BstMCI	CGRYCG	1 cut(s)	382
BstMWI	GCNNNNNNNGC	4 cut(s)	28, 701, 866, 1355
BstNI	CCWGG	1 cut(s)	1418
BstSCI	CCNGG	5 cut(s)	533, 578, 1294, 1295, 1416
BstSLI	GKGCMC	1 cut(s)	540
BstUI	CGCG	1 cut(s)	523
BstV1I	GCAGC	2 cut(s)	906, 1136
BstV2I	GAAGAC	1 cut(s)	1031
BstX2I	RGATCY	1 cut(s)	1423
BstXI	CCANNNNNNTGG	1 cut(s)	547
BstYI	RGATCY	1 cut(s)	1423
BstZI	CGGCCG	1 cut(s)	379
Bsu15I	ATCGAT	1 cut(s)	658
BsuRI	GGCC	7 cut(s)	230, 381, 494, 538, 551, 586, 1379
BsuTUI	ATCGAT	1 cut(s)	658
BtgI	CCRYGG	1 cut(s)	961
BtrI	CACGTC	1 cut(s)	325
BtsCI	GGATG	9 cut(s)	72, 84, 197, 411, 793, 1039, 1167, 1288, 1292
BtsI	GCAGTG	2 cut(s)	513, 1359
BtsIMutI	CAGTG	3 cut(s)	403, 513, 1359
Cac8I	GCNNGC	4 cut(s)	379, 588, 594, 697
CfoI	GCGC	4 cut(s)	520, 592, 655, 1560
Cfr10I	RCCGGY	2 cut(s)	377, 586
Cfr13I	GGNCC	5 cut(s)	229, 536, 537, 907, 1378
Cfr9I	CCCGGG	1 cut(s)	1295
ClaI	ATCGAT	1 cut(s)	658
CsiI	ACCWGGT	1 cut(s)	1416
CviAII	CATG	3 cut(s)	500, 962, 1250
DdeI	CTNAG	4 cut(s)	705, 933, 1452, 1482
DpnI	GATC	5 cut(s)	282, 1106, 1248, 1314, 1425
DpnII	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
EaeI	YGGCCR	2 cut(s)	379, 549
EagI	CGGCCG	1 cut(s)	379
Eam1104I	CTCTTC	3 cut(s)	64, 193, 1493
EarI	CTCTTC	3 cut(s)	64, 193, 1493
EciI	GGCGGA	1 cut(s)	358
EclXI	CGGCCG	1 cut(s)	379
Eco130I	CCWWGG	3 cut(s)	391, 546, 961
Eco24I	GRGCYC	3 cut(s)	540, 636, 1296
Eco31I	GGTCTC	1 cut(s)	604
Eco47I	GGWCC	1 cut(s)	907
Eco52I	CGGCCG	1 cut(s)	379
Eco57I	CTGAAG	1 cut(s)	1238
Eco88I	CYCGRG	1 cut(s)	1295
EcoO109I	RGGNCCY	1 cut(s)	907
EcoRII	CCWGG	1 cut(s)	1416
EcoT14I	CCWWGG	3 cut(s)	391, 546, 961
EcoT38I	GRGCYC	3 cut(s)	540, 636, 1296
ErhI	CCWWGG	3 cut(s)	391, 546, 961
Esp3I	CGTCTC	1 cut(s)	1498
FaeI	CATG	3 cut(s)	503, 965, 1253
FalI	AAGNNNNNCTT	2 cut(s)	896, 928
FaqI	GGGAC	2 cut(s)	656, 865
FatI	CATG	3 cut(s)	499, 961, 1249
FauI	CCCGC	1 cut(s)	1165
FbaI	TGATCA	2 cut(s)	1104, 1246
FblI	GTMKAC	1 cut(s)	462
Fnu4HI	GCNGC	8 cut(s)	382, 495, 521, 552, 651, 920, 1125, 1231
FokI	GGATG	9 cut(s)	59, 71, 184, 398, 800, 1046, 1174, 1295, 1299
FriOI	GRGCYC	3 cut(s)	540, 636, 1296
Fsp4HI	GCNGC	8 cut(s)	382, 495, 521, 552, 651, 920, 1125, 1231
FspBI	CTAG	4 cut(s)	392, 807, 855, 1128
GlaI	GCGC	4 cut(s)	519, 591, 654, 1559
GluI	GCNGC	8 cut(s)	382, 495, 521, 552, 651, 920, 1125, 1231
GsaI	CCCAGC	2 cut(s)	126, 822
HaeIII	GGCC	7 cut(s)	230, 381, 494, 538, 551, 586, 1379
HapII	CCGG	6 cut(s)	28, 378, 534, 579, 587, 1296
HhaI	GCGC	4 cut(s)	520, 592, 655, 1560
Hin1I	GRCGYC	2 cut(s)	504, 1507
Hin1II	CATG	3 cut(s)	503, 965, 1253
Hin6I	GCGC	4 cut(s)	518, 590, 653, 1558
HinP1I	GCGC	4 cut(s)	518, 590, 653, 1558
HincII	GTYRAC	1 cut(s)	463
HindII	GTYRAC	1 cut(s)	463
HindIII	AAGCTT	2 cut(s)	794, 890
HinfI	GANTC	2 cut(s)	33, 218
HpaII	CCGG	6 cut(s)	28, 378, 534, 579, 587, 1296
HphI	GGTGA	5 cut(s)	124, 319, 583, 727, 739
Hpy166II	GTNNAC	1 cut(s)	463
Hpy188I	TCNGA	4 cut(s)	280, 928, 1218, 1401
Hpy188III	TCNNGA	9 cut(s)	415, 637, 875, 1097, 1108, 1190, 1267, 1303, 1481
Hpy8I	GTNNAC	1 cut(s)	463
Hpy99I	CGWCG	3 cut(s)	218, 296, 443
HpyAV	CCTTC	7 cut(s)	193, 260, 325, 348, 471, 475, 1450
HpyCH4III	ACNGT	2 cut(s)	388, 1346
HpyCH4IV	ACGT	5 cut(s)	324, 504, 528, 1091, 1507
HpyCH4V	TGCA	3 cut(s)	22, 897, 922
HpyF10VI	GCNNNNNNNGC	4 cut(s)	28, 701, 866, 1355
HpyF3I	CTNAG	4 cut(s)	705, 933, 1452, 1482
HpySE526I	ACGT	5 cut(s)	324, 504, 528, 1091, 1507
Hsp92I	GRCGYC	2 cut(s)	504, 1507
Hsp92II	CATG	3 cut(s)	503, 965, 1253
HspAI	GCGC	4 cut(s)	518, 590, 653, 1558
KroI	GCCGGC	2 cut(s)	377, 586
KroNI	GCCGGC	2 cut(s)	379, 588
Ksp22I	TGATCA	2 cut(s)	1104, 1246
Kzo9I	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
LmnI	GCTCC	2 cut(s)	351, 1110
Lsp1109I	GCAGC	2 cut(s)	906, 1136
LweI	GCATC	2 cut(s)	664, 1024
MabI	ACCWGGT	1 cut(s)	1416
MaeI	CTAG	4 cut(s)	392, 807, 855, 1128
MaeII	ACGT	5 cut(s)	324, 504, 528, 1091, 1507
MaeIII	GTNAC	2 cut(s)	325, 524
MalI	GATC	5 cut(s)	282, 1106, 1248, 1314, 1425
MbiI	CCGCTC	1 cut(s)	45
MboI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
MflI	RGATCY	1 cut(s)	1423
MhlI	GDGCHC	3 cut(s)	540, 636, 1296
MluCI	AATT	7 cut(s)	424, 1006, 1042, 1100, 1271, 1328, 1518
MlyI	GAGTC	1 cut(s)	27
MmeI	TCCRAC	1 cut(s)	92
MroNI	GCCGGC	2 cut(s)	377, 586
MroXI	GAANNNNTTC	2 cut(s)	485, 1476
MseI	TTAA	4 cut(s)	771, 1371, 1512, 1536
MslI	CAYNNNNRTG	1 cut(s)	1344
MspA1I	CMGCKG	1 cut(s)	1172
MspCI	CTTAAG	1 cut(s)	1511
MspI	CCGG	6 cut(s)	28, 378, 534, 579, 587, 1296
MspR9I	CCNGG	5 cut(s)	535, 580, 1296, 1297, 1418
Mva1269I	GAATGC	2 cut(s)	922, 1560
MvaI	CCWGG	1 cut(s)	1418
MvnI	CGCG	1 cut(s)	523
MwoI	GCNNNNNNNGC	4 cut(s)	28, 701, 866, 1355
NaeI	GCCGGC	2 cut(s)	379, 588
NciI	CCSGG	4 cut(s)	535, 580, 1296, 1297
NcoI	CCATGG	1 cut(s)	961
NdeII	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
NgoMIV	GCCGGC	2 cut(s)	377, 586
NlaIII	CATG	3 cut(s)	503, 965, 1253
NlaIV	GGNNCC	5 cut(s)	538, 909, 969, 1395, 1425
NmeAIII	GCCGAG	1 cut(s)	996
NmuCI	GTSAC	2 cut(s)	325, 524
OliI	CACNNNNGTG	1 cut(s)	1344
PctI	GAATGC	2 cut(s)	922, 1560
PdiI	GCCGGC	2 cut(s)	379, 588
PdmI	GAANNNNTTC	2 cut(s)	485, 1476
PfeI	GAWTC	1 cut(s)	218
PkrI	GCNGC	8 cut(s)	383, 496, 522, 553, 652, 921, 1126, 1232
PleI	GAGTC	1 cut(s)	27
PpsI	GAGTC	1 cut(s)	27
PpuMI	RGGWCCY	1 cut(s)	907
Psp5II	RGGWCCY	1 cut(s)	907
Psp6I	CCWGG	1 cut(s)	1416
PspFI	CCCAGC	2 cut(s)	122, 818
PspGI	CCWGG	1 cut(s)	1416
PspN4I	GGNNCC	5 cut(s)	538, 909, 969, 1395, 1425
PspOMI	GGGCCC	1 cut(s)	536
PspPI	GGNCC	5 cut(s)	229, 536, 537, 907, 1378
PspPPI	RGGWCCY	1 cut(s)	907
PsuI	RGATCY	1 cut(s)	1423
RseI	CAYNNNNRTG	1 cut(s)	1344
SalI	GTCGAC	1 cut(s)	461
SaqAI	TTAA	4 cut(s)	771, 1371, 1512, 1536
SatI	GCNGC	8 cut(s)	382, 495, 521, 552, 651, 920, 1125, 1231
Sau3AI	GATC	5 cut(s)	280, 1104, 1246, 1312, 1423
Sau96I	GGNCC	5 cut(s)	229, 536, 537, 907, 1378
SchI	GAGTC	1 cut(s)	27
ScrFI	CCNGG	5 cut(s)	535, 580, 1296, 1297, 1418
SduI	GDGCHC	3 cut(s)	540, 636, 1296
SexAI	ACCWGGT	1 cut(s)	1416
SfaNI	GCATC	2 cut(s)	664, 1024
SinI	GGWCC	1 cut(s)	907
SmaI	CCCGGG	1 cut(s)	1297
SmiMI	CAYNNNNRTG	1 cut(s)	1344
SmlI	CTYRAG	3 cut(s)	635, 797, 1511
SmoI	CTYRAG	3 cut(s)	635, 797, 1511
SpeI	ACTAGT	1 cut(s)	854
Sse9I	AATT	7 cut(s)	424, 1006, 1042, 1100, 1271, 1328, 1518
SspMI	CTAG	4 cut(s)	392, 807, 855, 1128
StyD4I	CCNGG	5 cut(s)	533, 578, 1294, 1295, 1416
StyI	CCWWGG	3 cut(s)	391, 546, 961
TaaI	ACNGT	2 cut(s)	388, 1346
TaiI	ACGT	5 cut(s)	327, 507, 531, 1094, 1510
TaqI	TCGA	4 cut(s)	213, 462, 658, 1522
TaqII	GACCGA	1 cut(s)	1043
TasI	AATT	7 cut(s)	424, 1006, 1042, 1100, 1271, 1328, 1518
TauI	GCSGC	6 cut(s)	384, 497, 523, 554, 653, 1233
TfiI	GAWTC	1 cut(s)	218
Tru1I	TTAA	4 cut(s)	771, 1371, 1512, 1536
Tru9I	TTAA	4 cut(s)	771, 1371, 1512, 1536
TscAI	CASTG	3 cut(s)	410, 520, 1366
TseFI	GTSAC	2 cut(s)	325, 524
TseI	GCWGC	2 cut(s)	919, 1124
Tsp45I	GTSAC	2 cut(s)	325, 524
TspDTI	ATGAA	3 cut(s)	1040, 1161, 1178
TspGWI	ACGGA	1 cut(s)	280
TspMI	CCCGGG	1 cut(s)	1295
TspRI	CASTG	3 cut(s)	410, 520, 1366
Vha464I	CTTAAG	1 cut(s)	1511
VpaK11BI	GGWCC	1 cut(s)	907
XapI	RAATTY	2 cut(s)	1042, 1518
XcmI	CCANNNNNNNNNTGG	1 cut(s)	565
XmaI	CCCGGG	1 cut(s)	1295
XmaJI	CCTAGG	1 cut(s)	391
XmiI	GTMKAC	1 cut(s)	462
XmnI	GAANNNNTTC	2 cut(s)	485, 1476
XspI	CTAG	4 cut(s)	392, 807, 855, 1128
ZraI	GACGTC	2 cut(s)	505, 1508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.