Proton-conducting membrane transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1004500.v1.1 MD01G1004600.v1.1 MD06G1091100.v1.1 |
| pyrus_communis | pycom12397g00070 pycom12397g00130 pycom17g22000 |
| rosa_chinensis | RchiOBHm_Chr2g0118391 RchiOBHm_Chr5g0051091 RchiOBHm_CPg0501751 RchiOBHm_CPg0502661 RchiOBHm_MTg0498521 |
| rosa_laevigata | RLG00000000002 RLG00000000005 RLG00000000029 RLG00000000038 RLG00000000061 RLG00000000096 RLG00000000103 RLG00000000183 RLG00000000212 RLG00000000241 RLG00000000302 RLG00000000304 RLG00000037094 RLG00000037113 RLG00000037117 |
| rosa_multiflora | Rmu_sc0006632.1_g000001 |
| rosa_rugosa | RorugMtG0003100.1 RorugMtG0003300.1 |
| rosa_samantha | Rh1CG032100 Rh5BG348000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 714 |
| AciI | CCGC | 2 cut(s) | 378, 727 |
| AcsI | RAATTY | 2 cut(s) | 214, 630 |
| AfaI | GTAC | 3 cut(s) | 299, 310, 468 |
| AjnI | CCWGG | 1 cut(s) | 625 |
| AluBI | AGCT | 6 cut(s) | 204, 353, 410, 516, 577, 676 |
| AluI | AGCT | 6 cut(s) | 204, 353, 410, 516, 577, 676 |
| AoxI | GGCC | 2 cut(s) | 67, 165 |
| ApoI | RAATTY | 2 cut(s) | 214, 630 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 230, 243 |
| AspLEI | GCGC | 1 cut(s) | 643 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| AsuC2I | CCSGG | 1 cut(s) | 562 |
| BccI | CCATC | 2 cut(s) | 23, 174 |
| BceAI | ACGGC | 1 cut(s) | 180 |
| BciT130I | CCWGG | 1 cut(s) | 627 |
| BciVI | GTATCC | 1 cut(s) | 65 |
| BclI | TGATCA | 1 cut(s) | 103 |
| BcnI | CCSGG | 1 cut(s) | 562 |
| BfaI | CTAG | 2 cut(s) | 359, 683 |
| BfmI | CTRYAG | 1 cut(s) | 657 |
| BfuI | GTATCC | 1 cut(s) | 65 |
| Bme1390I | CCNGG | 2 cut(s) | 562, 627 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| BmrFI | CCNGG | 2 cut(s) | 562, 627 |
| BpmI | CTGGAG | 1 cut(s) | 396 |
| BpuMI | CCSGG | 1 cut(s) | 562 |
| Bsa29I | ATCGAT | 1 cut(s) | 90 |
| BsaJI | CCNNGG | 3 cut(s) | 119, 561, 625 |
| BseBI | CCWGG | 1 cut(s) | 627 |
| BseCI | ATCGAT | 1 cut(s) | 90 |
| BseDI | CCNNGG | 3 cut(s) | 119, 561, 625 |
| BseGI | GGATG | 1 cut(s) | 557 |
| BshFI | GGCC | 2 cut(s) | 69, 167 |
| BshVI | ATCGAT | 1 cut(s) | 90 |
| BsiSI | CCGG | 1 cut(s) | 561 |
| BsnI | GGCC | 2 cut(s) | 69, 167 |
| Bsp1407I | TGTACA | 1 cut(s) | 308 |
| Bsp143I | GATC | 3 cut(s) | 87, 103, 570 |
| BspACI | CCGC | 2 cut(s) | 378, 727 |
| BspANI | GGCC | 2 cut(s) | 69, 167 |
| BspDI | ATCGAT | 1 cut(s) | 90 |
| BspQI | GCTCTTC | 1 cut(s) | 523 |
| BsrGI | TGTACA | 1 cut(s) | 308 |
| BssECI | CCNNGG | 3 cut(s) | 119, 561, 625 |
| BssMI | GATC | 3 cut(s) | 87, 103, 570 |
| BssNAI | GTATAC | 1 cut(s) | 715 |
| BssT1I | CCWWGG | 1 cut(s) | 119 |
| Bst1107I | GTATAC | 1 cut(s) | 715 |
| Bst2UI | CCWGG | 1 cut(s) | 627 |
| Bst4CI | ACNGT | 3 cut(s) | 471, 536, 658 |
| Bst6I | CTCTTC | 3 cut(s) | 29, 142, 523 |
| BstAUI | TGTACA | 1 cut(s) | 308 |
| BstC8I | GCNNGC | 1 cut(s) | 514 |
| BstF5I | GGATG | 1 cut(s) | 557 |
| BstHHI | GCGC | 1 cut(s) | 643 |
| BstKTI | GATC | 3 cut(s) | 90, 106, 573 |
| BstMBI | GATC | 3 cut(s) | 87, 103, 570 |
| BstNI | CCWGG | 1 cut(s) | 627 |
| BstSCI | CCNGG | 2 cut(s) | 560, 625 |
| BstSFI | CTRYAG | 1 cut(s) | 657 |
| BstZ17I | GTATAC | 1 cut(s) | 715 |
| Bsu15I | ATCGAT | 1 cut(s) | 90 |
| BsuI | GTATCC | 1 cut(s) | 65 |
| BsuRI | GGCC | 2 cut(s) | 69, 167 |
| BsuTUI | ATCGAT | 1 cut(s) | 90 |
| BtsCI | GGATG | 1 cut(s) | 557 |
| BtsIMutI | CAGTG | 1 cut(s) | 654 |
| Cac8I | GCNNGC | 1 cut(s) | 514 |
| CfoI | GCGC | 1 cut(s) | 643 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| ClaI | ATCGAT | 1 cut(s) | 90 |
| Csp6I | GTAC | 3 cut(s) | 298, 309, 467 |
| CviAII | CATG | 1 cut(s) | 502 |
| CviQI | GTAC | 3 cut(s) | 298, 309, 467 |
| DpnI | GATC | 3 cut(s) | 89, 105, 572 |
| DpnII | GATC | 3 cut(s) | 87, 103, 570 |
| Eam1104I | CTCTTC | 3 cut(s) | 29, 142, 523 |
| EarI | CTCTTC | 3 cut(s) | 29, 142, 523 |
| Eco130I | CCWWGG | 1 cut(s) | 119 |
| EcoRII | CCWGG | 1 cut(s) | 625 |
| EcoT14I | CCWWGG | 1 cut(s) | 119 |
| ErhI | CCWWGG | 1 cut(s) | 119 |
| FaeI | CATG | 1 cut(s) | 505 |
| FatI | CATG | 1 cut(s) | 501 |
| FbaI | TGATCA | 1 cut(s) | 103 |
| FblI | GTMKAC | 1 cut(s) | 714 |
| FokI | GGATG | 1 cut(s) | 544 |
| FspBI | CTAG | 2 cut(s) | 359, 683 |
| GlaI | GCGC | 1 cut(s) | 642 |
| GsuI | CTGGAG | 1 cut(s) | 396 |
| HaeIII | GGCC | 2 cut(s) | 69, 167 |
| HapII | CCGG | 1 cut(s) | 561 |
| HhaI | GCGC | 1 cut(s) | 643 |
| Hin1II | CATG | 1 cut(s) | 505 |
| Hin6I | GCGC | 1 cut(s) | 641 |
| HinP1I | GCGC | 1 cut(s) | 641 |
| HindIII | AAGCTT | 1 cut(s) | 674 |
| HinfI | GANTC | 2 cut(s) | 92, 703 |
| HpaII | CCGG | 1 cut(s) | 561 |
| Hpy166II | GTNNAC | 2 cut(s) | 532, 715 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 103, 179 |
| Hpy188III | TCNNGA | 5 cut(s) | 210, 413, 447, 581, 707 |
| Hpy8I | GTNNAC | 2 cut(s) | 532, 715 |
| HpyAV | CCTTC | 2 cut(s) | 699, 713 |
| HpyCH4III | ACNGT | 3 cut(s) | 471, 536, 658 |
| HpyCH4IV | ACGT | 1 cut(s) | 711 |
| HpySE526I | ACGT | 1 cut(s) | 711 |
| Hsp92II | CATG | 1 cut(s) | 505 |
| HspAI | GCGC | 1 cut(s) | 641 |
| Ksp22I | TGATCA | 1 cut(s) | 103 |
| Kzo9I | GATC | 3 cut(s) | 87, 103, 570 |
| LguI | GCTCTTC | 1 cut(s) | 523 |
| LmnI | GCTCC | 2 cut(s) | 415, 437 |
| LpnPI | CCDG | 8 cut(s) | 60, 426, 432, 512, 574, 612, 639, 720 |
| MaeI | CTAG | 2 cut(s) | 359, 683 |
| MaeII | ACGT | 1 cut(s) | 711 |
| MalI | GATC | 3 cut(s) | 89, 105, 572 |
| MboI | GATC | 3 cut(s) | 87, 103, 570 |
| MboII | GAAGA | 6 cut(s) | 16, 68, 71, 129, 200, 510 |
| MfeI | CAATTG | 1 cut(s) | 636 |
| MluCI | AATT | 8 cut(s) | 60, 72, 214, 229, 248, 630, 636, 663 |
| MlyI | GAGTC | 1 cut(s) | 697 |
| MnlI | CCTC | 4 cut(s) | 109, 294, 356, 472 |
| MroXI | GAANNNNTTC | 2 cut(s) | 230, 243 |
| MseI | TTAA | 2 cut(s) | 347, 392 |
| MspI | CCGG | 1 cut(s) | 561 |
| MspR9I | CCNGG | 2 cut(s) | 562, 627 |
| MunI | CAATTG | 1 cut(s) | 636 |
| MvaI | CCWGG | 1 cut(s) | 627 |
| NciI | CCSGG | 1 cut(s) | 562 |
| NdeII | GATC | 3 cut(s) | 87, 103, 570 |
| NlaIII | CATG | 1 cut(s) | 505 |
| PciSI | GCTCTTC | 1 cut(s) | 523 |
| PdmI | GAANNNNTTC | 2 cut(s) | 230, 243 |
| PfeI | GAWTC | 1 cut(s) | 92 |
| PleI | GAGTC | 1 cut(s) | 697 |
| PpsI | GAGTC | 1 cut(s) | 697 |
| Psp6I | CCWGG | 1 cut(s) | 625 |
| PspGI | CCWGG | 1 cut(s) | 625 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| RsaI | GTAC | 3 cut(s) | 299, 310, 468 |
| RsaNI | GTAC | 3 cut(s) | 298, 309, 467 |
| SapI | GCTCTTC | 1 cut(s) | 523 |
| SaqAI | TTAA | 2 cut(s) | 347, 392 |
| Sau3AI | GATC | 3 cut(s) | 87, 103, 570 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| SchI | GAGTC | 1 cut(s) | 697 |
| ScrFI | CCNGG | 2 cut(s) | 562, 627 |
| SfcI | CTRYAG | 1 cut(s) | 657 |
| Sse9I | AATT | 8 cut(s) | 60, 72, 214, 229, 248, 630, 636, 663 |
| SsiI | CCGC | 2 cut(s) | 378, 727 |
| SspMI | CTAG | 2 cut(s) | 359, 683 |
| StyD4I | CCNGG | 2 cut(s) | 560, 625 |
| StyI | CCWWGG | 1 cut(s) | 119 |
| TaaI | ACNGT | 3 cut(s) | 471, 536, 658 |
| TaiI | ACGT | 1 cut(s) | 714 |
| TaqI | TCGA | 4 cut(s) | 27, 90, 573, 736 |
| TasI | AATT | 8 cut(s) | 60, 72, 214, 229, 248, 630, 636, 663 |
| TatI | WGTACW | 2 cut(s) | 297, 308 |
| TfiI | GAWTC | 1 cut(s) | 92 |
| Tru1I | TTAA | 2 cut(s) | 347, 392 |
| Tru9I | TTAA | 2 cut(s) | 347, 392 |
| TscAI | CASTG | 1 cut(s) | 661 |
| TspDTI | ATGAA | 4 cut(s) | 17, 121, 546, 640 |
| TspGWI | ACGGA | 1 cut(s) | 280 |
| TspRI | CASTG | 1 cut(s) | 661 |
| XapI | RAATTY | 2 cut(s) | 214, 630 |
| XmiI | GTMKAC | 1 cut(s) | 714 |
| XmnI | GAANNNNTTC | 2 cut(s) | 230, 243 |
| XspI | CTAG | 2 cut(s) | 359, 683 |