atprd3,prd3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01690 AT1G01690 AT1G01690 |
| fragaria_vesca | FvH4_7g14300 FvH4_7g14300 |
| malus_domestica | MD01G1061000.v1.1 MD07G1136800.v1.1 |
| prunus_persica | Prupe.2G170800_v2.0.a1 |
| pyrus_communis | pycom01g09110 pycom07g13450 |
| rosa_chinensis | RchiOBHm_Chr1g0355291 |
| rosa_laevigata | RLG00000001169 RLG00000007299 RLG00000013822 RLG00000017929 RLG00000028163 |
| rosa_multiflora | Rmu_sc0004135.1_g000021 |
| rosa_roxburghii | Rroxscaffold_4G00300520 |
| rosa_rugosa | Rorug01G0246500 Rorug04G0015600 |
| rosa_samantha | Rh1AG258700 Rh1BG228300 Rh1CG242300 Rh1DG256100 Rh5CG336500 |
| rosa_wichuraiana | Rw1G022830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 194 |
| AatII | GACGTC | 1 cut(s) | 451 |
| AciI | CCGC | 2 cut(s) | 22, 127 |
| AcoI | YGGCCR | 1 cut(s) | 51 |
| AcsI | RAATTY | 2 cut(s) | 464, 569 |
| AcyI | GRCGYC | 1 cut(s) | 448 |
| AfaI | GTAC | 1 cut(s) | 354 |
| AgsI | TTSAA | 4 cut(s) | 38, 307, 470, 576 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 462, 494 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 406, 438 |
| AluBI | AGCT | 2 cut(s) | 192, 238 |
| AluI | AGCT | 2 cut(s) | 192, 238 |
| Alw26I | GTCTC | 1 cut(s) | 366 |
| AoxI | GGCC | 1 cut(s) | 51 |
| ApoI | RAATTY | 2 cut(s) | 464, 569 |
| AseI | ATTAAT | 1 cut(s) | 282 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 251 |
| BalI | TGGCCA | 1 cut(s) | 53 |
| BbsI | GAAGAC | 1 cut(s) | 254 |
| BccI | CCATC | 2 cut(s) | 236, 481 |
| BcoDI | GTCTC | 1 cut(s) | 366 |
| BfaI | CTAG | 2 cut(s) | 239, 432 |
| BisI | GCNGC | 1 cut(s) | 23 |
| BlsI | GCNGC | 1 cut(s) | 24 |
| BpiI | GAAGAC | 1 cut(s) | 254 |
| BpuEI | CTTGAG | 1 cut(s) | 348 |
| BsaHI | GRCGYC | 1 cut(s) | 448 |
| BsaI | GGTCTC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 572 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseGI | GGATG | 1 cut(s) | 123 |
| BseRI | GAGGAG | 2 cut(s) | 28, 56 |
| BshFI | GGCC | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 366 |
| BsnI | GGCC | 1 cut(s) | 53 |
| Bso31I | GGTCTC | 1 cut(s) | 366 |
| Bsp1407I | TGTACA | 1 cut(s) | 352 |
| Bsp143I | GATC | 3 cut(s) | 439, 453, 516 |
| Bsp19I | CCATGG | 1 cut(s) | 48 |
| BspACI | CCGC | 2 cut(s) | 22, 127 |
| BspANI | GGCC | 1 cut(s) | 53 |
| BspTNI | GGTCTC | 1 cut(s) | 366 |
| BsrGI | TGTACA | 1 cut(s) | 352 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssMI | GATC | 3 cut(s) | 439, 453, 516 |
| BssNI | GRCGYC | 1 cut(s) | 448 |
| BssT1I | CCWWGG | 1 cut(s) | 48 |
| Bst4CI | ACNGT | 1 cut(s) | 232 |
| Bst6I | CTCTTC | 1 cut(s) | 5 |
| BstACI | GRCGYC | 1 cut(s) | 448 |
| BstAUI | TGTACA | 1 cut(s) | 352 |
| BstC8I | GCNNGC | 2 cut(s) | 27, 397 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstDSI | CCRYGG | 1 cut(s) | 48 |
| BstF5I | GGATG | 1 cut(s) | 123 |
| BstKTI | GATC | 3 cut(s) | 442, 456, 519 |
| BstMAI | GTCTC | 1 cut(s) | 366 |
| BstMBI | GATC | 3 cut(s) | 439, 453, 516 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 198 |
| BstV2I | GAAGAC | 1 cut(s) | 254 |
| BsuRI | GGCC | 1 cut(s) | 53 |
| BtgI | CCRYGG | 1 cut(s) | 48 |
| BtsCI | GGATG | 1 cut(s) | 123 |
| BtsIMutI | CAGTG | 1 cut(s) | 463 |
| Cac8I | GCNNGC | 2 cut(s) | 27, 397 |
| Csp6I | GTAC | 1 cut(s) | 353 |
| CviAII | CATG | 3 cut(s) | 49, 149, 409 |
| CviJI | RGCY | 5 cut(s) | 25, 53, 83, 192, 238 |
| CviKI_1 | RGCY | 5 cut(s) | 25, 53, 83, 192, 238 |
| CviQI | GTAC | 1 cut(s) | 353 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DpnI | GATC | 3 cut(s) | 441, 455, 518 |
| DpnII | GATC | 3 cut(s) | 439, 453, 516 |
| DraI | TTTAAA | 1 cut(s) | 220 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 194 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 194 |
| EaeI | YGGCCR | 1 cut(s) | 51 |
| Eam1104I | CTCTTC | 1 cut(s) | 5 |
| EarI | CTCTTC | 1 cut(s) | 5 |
| Eco130I | CCWWGG | 1 cut(s) | 48 |
| Eco31I | GGTCTC | 1 cut(s) | 366 |
| EcoT14I | CCWWGG | 1 cut(s) | 48 |
| ErhI | CCWWGG | 1 cut(s) | 48 |
| FaeI | CATG | 3 cut(s) | 52, 152, 412 |
| FatI | CATG | 3 cut(s) | 48, 148, 408 |
| Fnu4HI | GCNGC | 1 cut(s) | 23 |
| FokI | GGATG | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 1 cut(s) | 23 |
| FspBI | CTAG | 2 cut(s) | 239, 432 |
| GluI | GCNGC | 1 cut(s) | 23 |
| HaeIII | GGCC | 1 cut(s) | 53 |
| Hin1I | GRCGYC | 1 cut(s) | 448 |
| Hin1II | CATG | 3 cut(s) | 52, 152, 412 |
| HinfI | GANTC | 3 cut(s) | 44, 176, 524 |
| Hpy166II | GTNNAC | 2 cut(s) | 187, 269 |
| Hpy188I | TCNGA | 3 cut(s) | 439, 453, 512 |
| Hpy188III | TCNNGA | 4 cut(s) | 38, 226, 365, 532 |
| Hpy8I | GTNNAC | 2 cut(s) | 187, 269 |
| Hpy99I | CGWCG | 1 cut(s) | 450 |
| HpyCH4III | ACNGT | 1 cut(s) | 232 |
| HpyCH4IV | ACGT | 1 cut(s) | 448 |
| HpyCH4V | TGCA | 2 cut(s) | 399, 547 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 198 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| HpySE526I | ACGT | 1 cut(s) | 448 |
| Hsp92I | GRCGYC | 1 cut(s) | 448 |
| Hsp92II | CATG | 3 cut(s) | 52, 152, 412 |
| Kzo9I | GATC | 3 cut(s) | 439, 453, 516 |
| LmnI | GCTCC | 1 cut(s) | 235 |
| LpnPI | CCDG | 2 cut(s) | 211, 545 |
| MaeI | CTAG | 2 cut(s) | 239, 432 |
| MaeII | ACGT | 1 cut(s) | 448 |
| MaeIII | GTNAC | 1 cut(s) | 275 |
| MalI | GATC | 3 cut(s) | 441, 455, 518 |
| MboI | GATC | 3 cut(s) | 439, 453, 516 |
| MboII | GAAGA | 8 cut(s) | 19, 22, 112, 118, 126, 259, 397, 400 |
| MlsI | TGGCCA | 1 cut(s) | 53 |
| MluCI | AATT | 3 cut(s) | 66, 464, 569 |
| MluNI | TGGCCA | 1 cut(s) | 53 |
| MlyI | GAGTC | 1 cut(s) | 53 |
| MnlI | CCTC | 6 cut(s) | 6, 34, 148, 310, 351, 454 |
| Mox20I | TGGCCA | 1 cut(s) | 53 |
| MroXI | GAANNNNTTC | 1 cut(s) | 251 |
| MscI | TGGCCA | 1 cut(s) | 53 |
| MseI | TTAA | 4 cut(s) | 78, 219, 282, 500 |
| Msp20I | TGGCCA | 1 cut(s) | 53 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 198 |
| NcoI | CCATGG | 1 cut(s) | 48 |
| NdeII | GATC | 3 cut(s) | 439, 453, 516 |
| NlaIII | CATG | 3 cut(s) | 52, 152, 412 |
| NmuCI | GTSAC | 1 cut(s) | 275 |
| PdmI | GAANNNNTTC | 1 cut(s) | 251 |
| PfeI | GAWTC | 2 cut(s) | 176, 524 |
| PkrI | GCNGC | 1 cut(s) | 24 |
| PleI | GAGTC | 1 cut(s) | 52 |
| PpsI | GAGTC | 1 cut(s) | 52 |
| PshBI | ATTAAT | 1 cut(s) | 282 |
| RsaI | GTAC | 1 cut(s) | 354 |
| RsaNI | GTAC | 1 cut(s) | 353 |
| SaqAI | TTAA | 4 cut(s) | 78, 219, 282, 500 |
| SatI | GCNGC | 1 cut(s) | 23 |
| Sau3AI | GATC | 3 cut(s) | 439, 453, 516 |
| SchI | GAGTC | 1 cut(s) | 53 |
| SetI | ASST | 6 cut(s) | 194, 240, 302, 313, 362, 451 |
| SmlI | CTYRAG | 1 cut(s) | 363 |
| SmoI | CTYRAG | 1 cut(s) | 363 |
| Sse9I | AATT | 3 cut(s) | 66, 464, 569 |
| SsiI | CCGC | 2 cut(s) | 22, 127 |
| SspMI | CTAG | 2 cut(s) | 239, 432 |
| StyI | CCWWGG | 1 cut(s) | 48 |
| TaaI | ACNGT | 1 cut(s) | 232 |
| TaiI | ACGT | 1 cut(s) | 451 |
| TaqI | TCGA | 1 cut(s) | 445 |
| TasI | AATT | 3 cut(s) | 66, 464, 569 |
| TatI | WGTACW | 1 cut(s) | 352 |
| TauI | GCSGC | 1 cut(s) | 25 |
| TfiI | GAWTC | 2 cut(s) | 176, 524 |
| Tru1I | TTAA | 4 cut(s) | 78, 219, 282, 500 |
| Tru9I | TTAA | 4 cut(s) | 78, 219, 282, 500 |
| TscAI | CASTG | 1 cut(s) | 463 |
| TseFI | GTSAC | 1 cut(s) | 275 |
| Tsp45I | GTSAC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 3 cut(s) | 119, 334, 486 |
| TspGWI | ACGGA | 2 cut(s) | 254, 263 |
| TspRI | CASTG | 1 cut(s) | 463 |
| VspI | ATTAAT | 1 cut(s) | 282 |
| XapI | RAATTY | 2 cut(s) | 464, 569 |
| XmnI | GAANNNNTTC | 1 cut(s) | 251 |
| XspI | CTAG | 2 cut(s) | 239, 432 |
| ZraI | GACGTC | 1 cut(s) | 449 |