Rorug01G0246500

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
35351013 .. 35352419
1407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0246500.1

Sequence Viewer

Length: 297 bp
ATGATTCAACCACCTACAAAACCCTCCTCCAGCCGCCCCTACGCTGCCATCATCATCGACTCTCCCTCCCACACAGACCACAAAAAACCCTGGCGCCCCAACCCGATCTGCAAACTCCACAACCCATCTCTCCACAAAGGATCTGGAATTAGTAATTGCAAAAATTGCAGATTTGGCGAACCCGACACTCCTTCCTTTCTCATCGCCAAATTCACAGCTTCATTCTTCTTCTATTGTGTTATTGTTCATTCTTGGATGTGCTATAACTGGAGGATGGTGAAATATATCGGAAAATAG

Protein Analysis

98

Amino Acids

11.26

Weight (kDa)

9.64

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 93
AciI CCGC 1 cut(s) 34
AclWI GGATC 1 cut(s) 148
AcsI RAATTY 1 cut(s) 209
AcyI GRCGYC 1 cut(s) 94
AgsI TTSAA 1 cut(s) 8
AjnI CCWGG 1 cut(s) 89
AluBI AGCT 1 cut(s) 218
AluI AGCT 1 cut(s) 218
AlwI GGATC 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 44
ApoI RAATTY 1 cut(s) 209
AspLEI GCGC 1 cut(s) 96
AsuHPI GGTGA 1 cut(s) 289
BanI GGYRCC 1 cut(s) 93
BbvI GCAGC 1 cut(s) 31
BccI CCATC 3 cut(s) 56, 133, 268
BciT130I CCWGG 1 cut(s) 91
BfoI RGCGCY 1 cut(s) 97
BisI GCNGC 2 cut(s) 34, 45
BlsI GCNGC 2 cut(s) 35, 46
Bme1390I CCNGG 1 cut(s) 91
BmiI GGNNCC 1 cut(s) 95
BmrFI CCNGG 1 cut(s) 91
BpmI CTGGAG 2 cut(s) 13, 289
BsaHI GRCGYC 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 89
BsaXI ACNNNNNCTCC 2 cut(s) 50, 80
Bse1I ACTGG 1 cut(s) 272
BseBI CCWGG 1 cut(s) 91
BseDI CCNNGG 1 cut(s) 89
BseGI GGATG 2 cut(s) 261, 279
BseNI ACTGG 1 cut(s) 272
BseRI GAGGAG 1 cut(s) 16
BseXI GCAGC 1 cut(s) 31
BshNI GGYRCC 1 cut(s) 93
Bsp143I GATC 2 cut(s) 105, 140
BspACI CCGC 1 cut(s) 34
BspLI GGNNCC 1 cut(s) 95
BspPI GGATC 1 cut(s) 148
BspT107I GGYRCC 1 cut(s) 93
BsrI ACTGG 1 cut(s) 272
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 2 cut(s) 105, 140
BssNI GRCGYC 1 cut(s) 94
Bst2UI CCWGG 1 cut(s) 91
BstACI GRCGYC 1 cut(s) 94
BstAPI GCANNNNNTGC 1 cut(s) 165
BstF5I GGATG 2 cut(s) 261, 279
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 2 cut(s) 108, 143
BstMBI GATC 2 cut(s) 105, 140
BstMWI GCNNNNNNNGC 2 cut(s) 165, 174
BstNI CCWGG 1 cut(s) 91
BstSCI CCNGG 1 cut(s) 89
BstV1I GCAGC 1 cut(s) 31
BstX2I RGATCY 1 cut(s) 140
BstYI RGATCY 1 cut(s) 140
BtgZI GCGATG 1 cut(s) 187
BtsCI GGATG 2 cut(s) 261, 279
CfoI GCGC 1 cut(s) 96
CviJI RGCY 2 cut(s) 33, 218
CviKI_1 RGCY 2 cut(s) 33, 218
DinI GGCGCC 1 cut(s) 95
DpnI GATC 2 cut(s) 107, 142
DpnII GATC 2 cut(s) 105, 140
EcoRII CCWGG 1 cut(s) 89
EgeI GGCGCC 1 cut(s) 95
EheI GGCGCC 1 cut(s) 95
FaiI YATR 2 cut(s) 264, 285
Fnu4HI GCNGC 2 cut(s) 34, 45
FokI GGATG 2 cut(s) 268, 286
Fsp4HI GCNGC 2 cut(s) 34, 45
GlaI GCGC 1 cut(s) 95
GluI GCNGC 2 cut(s) 34, 45
GsuI CTGGAG 2 cut(s) 13, 289
HaeII RGCGCY 1 cut(s) 97
HhaI GCGC 1 cut(s) 96
Hin1I GRCGYC 1 cut(s) 94
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HinfI GANTC 2 cut(s) 4, 59
HphI GGTGA 1 cut(s) 289
Hpy188I TCNGA 1 cut(s) 290
Hpy188III TCNNGA 1 cut(s) 144
HpyAV CCTTC 1 cut(s) 201
HpyCH4V TGCA 3 cut(s) 111, 159, 168
HpyF10VI GCNNNNNNNGC 2 cut(s) 165, 174
Hsp92I GRCGYC 1 cut(s) 94
HspAI GCGC 1 cut(s) 94
KasI GGCGCC 1 cut(s) 93
Kzo9I GATC 2 cut(s) 105, 140
LpnPI CCDG 5 cut(s) 43, 76, 103, 129, 253
Lsp1109I GCAGC 1 cut(s) 31
MalI GATC 2 cut(s) 107, 142
MboI GATC 2 cut(s) 105, 140
MboII GAAGA 2 cut(s) 217, 220
MflI RGATCY 1 cut(s) 140
MluCI AATT 4 cut(s) 147, 154, 163, 209
Mly113I GGCGCC 1 cut(s) 94
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 4 cut(s) 34, 37, 76, 264
MspR9I CCNGG 1 cut(s) 91
MvaI CCWGG 1 cut(s) 91
MwoI GCNNNNNNNGC 2 cut(s) 165, 174
NarI GGCGCC 1 cut(s) 94
NdeII GATC 2 cut(s) 105, 140
NlaIV GGNNCC 1 cut(s) 95
PfeI GAWTC 1 cut(s) 4
PkrI GCNGC 2 cut(s) 35, 46
PleI GAGTC 1 cut(s) 53
PluTI GGCGCC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 53
Psp6I CCWGG 1 cut(s) 89
PspGI CCWGG 1 cut(s) 89
PspN4I GGNNCC 1 cut(s) 95
PsuI RGATCY 1 cut(s) 140
SatI GCNGC 2 cut(s) 34, 45
Sau3AI GATC 2 cut(s) 105, 140
SchI GAGTC 1 cut(s) 53
ScrFI CCNGG 1 cut(s) 91
SetI ASST 2 cut(s) 16, 220
SfoI GGCGCC 1 cut(s) 95
SgeI CNNG 8 cut(s) 42, 102, 103, 115, 156, 194, 264, 280
Sse9I AATT 4 cut(s) 147, 154, 163, 209
SsiI CCGC 1 cut(s) 34
SspDI GGCGCC 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 89
TaqI TCGA 1 cut(s) 57
TasI AATT 4 cut(s) 147, 154, 163, 209
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 1 cut(s) 4
TseI GCWGC 1 cut(s) 44
TspDTI ATGAA 2 cut(s) 210, 236
XapI RAATTY 1 cut(s) 209
XcmI CCANNNNNNNNNTGG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.