Rh5DG175500

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000192
Physical Location & Seq
Reverse (-)
18910399 .. 18914455
4057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG175500.1

Sequence Viewer

Length: 1620 bp
ATGTGTATAAAACAATTGTGTGTGGGCAGCCCACAACCAAGGAAAACAAGAGAAGAGAGGCCAGAGAGCATGGAGCTGGACTACTTAATCCTTGCTGTGCTCGTCTTTGTTTCTCTTTACTATCTTTTTCGTTTGTTGAATGTTAATATTAAATCCAGGCTTAAGCGCGACAGTGGCACCAAAAGTGAACTACTAGGGCTTGAGCTACCACCAGGAAGCACCGGTTGGCCGATCATCGGCGAAACCCTCGAGTATCTACGCACAGCAAAACAGGGTGTCCCTGAAAAGTTCATAGCAGACAGGAGAAACAAGCACTCGTCATCATTATCATGCAAGGTTTTCAAGACCTCTTTGCTACGCGAATCTATGGCCGTGCTGTGCACTGCTGCAGGGAACAAATTTCTGTTTTCGAACGAGAACAAACTGGTCAAGTCTTGGTGGCCTGCAAACTTTGAGAAGATCTTTGCCAACACTGAGAAAACAGACACCACCCAAGAGTCGATTCGGTTGCGCAAAGTCTTGTCCCCATTTCTCAAGCCTGATGCTCTTCACAGGTACATAGGGGTCATGGACGAGGTCACCAAACAACATCTGGACTTGTATTGGTCATCCTCCTCTTCCTCGTCGGTTGATTATGTAAAAGAAAAGGATCAGAAAGTGATTATCATAGTCTACCCATTAGCCAAGAAGTACACCTTCACTTTAGCATGTAGACTCTTCTTAAACATTGAGGATCCAAAGCTAGTTGCCAAACTAGAGGAGTCAATTCGGCATATATCTTCGGGCTTCATTTCGCTACCAATAGATTTGCCAGGCACGAAATTCAACCGAGCCATTCGAGCATCCAAGCAAATCAAGAAGGAAATTGAGGAGATGGTTAAGCAGAGGAGGACAGATCTACATCTTCATCTTTTGGAGACTAGTAGTAACCATCATCAAGATTTGTTGTCTAGGTTGCTCATGGAGACATATAGCGATGGGAAAGAGCTGATGAAGGAATCAGACATTGCCAACAAGTTGTATGGTCTAATAGTCGGTGCTTACGACAATATAAGTACCACCTTGGTGTCGATTATCATGTTTCTGTCGCAGCTTCCTCATGTTTATGATGCCGTCCTTAAAGAGCAAATGGAGATTGCAGAATCAAAGGCAGAAGGGGAGTTGCTGAACTGGGATGACTTGCAGAAGATGAAATATTCATGGAGCGTGGCATGTGAAGCATTGAGATTGTTGCCACCAATTCTCGGAACTTTTAGAGAGGCCATTACCGACTTTGCGTACGAAGGATACATGATTCCAAAAGGAATGAAGTTACACTGGAATATGTATGCCACACATAAAAACCCGGAATACTTCCCAGATCCAGAGAAGTTCGACCCGTCAAGGTTCCAAGGACAAGGACCAGCTCCTTATTCATATGTTCCTTTTGGAGGAGGACCTCGAATGTGTCCAGGAAAAGAATATGCTCGGTTCAAGATATTGGTTTTCATGCATAATGTTGTCACTAGATTTAAATGGGAGATGGTTTTTCCAGACGAAAAAATGATCATGGACCCGGTTCTTATTCCTACAAAAGGACTTCCTATTCGCCTTTTTCCTCATCAATCATCATCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

539

Amino Acids

61.91

Weight (kDa)

8.96

Isoelectric Point (pI)

51.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 70 - 526 7.1e-58 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 512
AccB1I GGYRCC 1 cut(s) 176
AccI GTMKAC 2 cut(s) 672, 712
AccII CGCG 2 cut(s) 168, 360
AclWI GGATC 4 cut(s) 657, 728, 741, 1355
AcoI YGGCCR 2 cut(s) 227, 369
AcsI RAATTY 2 cut(s) 398, 821
AfaI GTAC 4 cut(s) 557, 692, 1057, 1280
AfiI CCNNNNNNNGG 4 cut(s) 236, 1244, 1430, 1574
AflII CTTAAG 1 cut(s) 161
AgeI ACCGGT 1 cut(s) 221
AgsI TTSAA 4 cut(s) 139, 343, 826, 1474
AhlI ACTAGT 1 cut(s) 920
AjnI CCWGG 4 cut(s) 155, 211, 811, 1450
AjuI GAANNNNNNNTTGG 4 cut(s) 208, 240, 486, 518
AleI CACNNNNGTG 1 cut(s) 1064
AluBI AGCT 6 cut(s) 76, 205, 742, 988, 1093, 1406
AluI AGCT 6 cut(s) 76, 205, 742, 988, 1093, 1406
Alw21I GWGCWC 2 cut(s) 102, 383
Alw26I GTCTC 2 cut(s) 911, 959
Alw44I GTGCAC 1 cut(s) 379
AlwI GGATC 4 cut(s) 657, 728, 741, 1355
Ama87I CYCGRG 1 cut(s) 248
AoxI GGCC 5 cut(s) 59, 227, 369, 440, 1260
ApaLI GTGCAC 1 cut(s) 379
ApeKI GCWGC 3 cut(s) 27, 386, 1090
ApoI RAATTY 2 cut(s) 398, 821
ArsI GACNNNNNNTTYG 2 cut(s) 1569, 1601
AsiGI ACCGGT 1 cut(s) 221
AspLEI GCGC 2 cut(s) 168, 513
AspS9I GGNCC 3 cut(s) 1400, 1436, 1552
AsuC2I CCSGG 2 cut(s) 1346, 1556
AsuHPI GGTGA 1 cut(s) 571
AsuII TTCGAA 1 cut(s) 410
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 3 cut(s) 1400, 1436, 1552
BaeGI GKGCMC 1 cut(s) 383
BamHI GGATCC 1 cut(s) 733
BanI GGYRCC 1 cut(s) 176
Bbv12I GWGCWC 2 cut(s) 102, 383
BbvI GCAGC 3 cut(s) 39, 373, 1102
BccI CCATC 4 cut(s) 868, 939, 971, 1516
BceAI ACGGC 2 cut(s) 356, 1097
BcgI CGANNNNNNTGC 2 cut(s) 490, 524
BciT130I CCWGG 4 cut(s) 157, 213, 813, 1452
BciVI GTATCC 1 cut(s) 1280
BclI TGATCA 1 cut(s) 1545
BcnI CCSGG 2 cut(s) 1346, 1556
BcoDI GTCTC 2 cut(s) 911, 959
BcuI ACTAGT 1 cut(s) 920
BfaI CTAG 6 cut(s) 194, 743, 755, 921, 951, 1506
BfmI CTRYAG 1 cut(s) 387
BfrI CTTAAG 1 cut(s) 161
BfuI GTATCC 1 cut(s) 1280
BglII AGATCT 2 cut(s) 459, 895
BisI GCNGC 3 cut(s) 28, 387, 1091
BlsI GCNGC 3 cut(s) 29, 388, 1092
Bme1390I CCNGG 6 cut(s) 157, 213, 813, 1346, 1452, 1556
Bme18I GGWCC 3 cut(s) 1400, 1436, 1552
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 3 cut(s) 1400, 1436, 1552
BmiI GGNNCC 4 cut(s) 178, 735, 1388, 1554
BmrFI CCNGG 6 cut(s) 157, 213, 813, 1346, 1452, 1556
BmrI ACTGGG 1 cut(s) 1180
BmsI GCATC 3 cut(s) 532, 851, 1099
BmuI ACTGGG 1 cut(s) 1180
Bpu14I TTCGAA 1 cut(s) 410
BpuEI CTTGAG 2 cut(s) 221, 518
BpuMI CCSGG 2 cut(s) 1346, 1556
BsaBI GATNNNNATC 1 cut(s) 900
BsaJI CCNNGG 3 cut(s) 38, 1062, 1390
BsaWI WCCGGW 1 cut(s) 221
Bsc4I CCNNNNNNNGG 4 cut(s) 236, 1244, 1430, 1574
Bse118I RCCGGY 1 cut(s) 221
Bse1I ACTGG 3 cut(s) 429, 1175, 1322
Bse3DI GCAATG 1 cut(s) 1005
Bse8I GATNNNNATC 1 cut(s) 900
BseBI CCWGG 4 cut(s) 157, 213, 813, 1452
BseDI CCNNGG 3 cut(s) 38, 1062, 1390
BseGI GGATG 4 cut(s) 608, 842, 1180, 1610
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 4 cut(s) 236, 1244, 1430, 1574
BseMI GCAATG 1 cut(s) 1005
BseMII CTCAG 1 cut(s) 465
BseNI ACTGG 3 cut(s) 429, 1175, 1322
BseRI GAGGAG 5 cut(s) 604, 773, 884, 901, 1446
BseSI GKGCMC 1 cut(s) 383
BseXI GCAGC 3 cut(s) 39, 373, 1102
Bsh1236I CGCG 2 cut(s) 168, 360
BshFI GGCC 5 cut(s) 61, 229, 371, 442, 1262
BshNI GGYRCC 1 cut(s) 176
BshTI ACCGGT 1 cut(s) 221
BsiHKAI GWGCWC 2 cut(s) 102, 383
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 3 cut(s) 222, 1346, 1556
BsiWI CGTACG 1 cut(s) 1278
BslFI GGGAC 2 cut(s) 263, 508
BslI CCNNNNNNNGG 4 cut(s) 236, 1244, 1430, 1574
BsmAI GTCTC 2 cut(s) 911, 959
BsmFI GGGAC 2 cut(s) 263, 508
BsnI GGCC 5 cut(s) 61, 229, 371, 442, 1262
BsoBI CYCGRG 1 cut(s) 248
Bsp119I TTCGAA 1 cut(s) 410
Bsp1286I GDGCHC 2 cut(s) 102, 383
Bsp143I GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
BspANI GGCC 5 cut(s) 61, 229, 371, 442, 1262
BspCNI CTCAG 1 cut(s) 466
BspFNI CGCG 2 cut(s) 168, 360
BspHI TCATGA 1 cut(s) 1616
BspLI GGNNCC 4 cut(s) 178, 735, 1388, 1554
BspMAI CTGCAG 1 cut(s) 391
BspPI GGATC 4 cut(s) 657, 728, 741, 1355
BspQI GCTCTTC 1 cut(s) 552
BspT104I TTCGAA 1 cut(s) 410
BspT107I GGYRCC 1 cut(s) 176
BspTI CTTAAG 1 cut(s) 161
BsrDI GCAATG 1 cut(s) 1005
BsrFI RCCGGY 1 cut(s) 221
BsrI ACTGG 3 cut(s) 429, 1175, 1322
BssAI RCCGGY 1 cut(s) 221
BssECI CCNNGG 3 cut(s) 38, 1062, 1390
BssMI GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
BssT1I CCWWGG 3 cut(s) 38, 1062, 1390
Bst2UI CCWGG 4 cut(s) 157, 213, 813, 1452
Bst4CI ACNGT 1 cut(s) 173
Bst6I CTCTTC 4 cut(s) 48, 552, 622, 722
BstAFI CTTAAG 1 cut(s) 161
BstBI TTCGAA 1 cut(s) 410
BstC8I GCNNGC 1 cut(s) 444
BstDEI CTNAG 1 cut(s) 474
BstEII GGTNACC 1 cut(s) 577
BstENI CCTNNNNNAGG 2 cut(s) 1428, 1572
BstF5I GGATG 4 cut(s) 608, 842, 1180, 1610
BstFNI CGCG 2 cut(s) 168, 360
BstHHI GCGC 2 cut(s) 168, 513
BstKTI GATC 7 cut(s) 234, 462, 652, 736, 898, 1363, 1548
BstMAI GTCTC 2 cut(s) 911, 959
BstMBI GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
BstMWI GCNNNNNNNGC 3 cut(s) 174, 839, 1217
BstNI CCWGG 4 cut(s) 157, 213, 813, 1452
BstNSI RCATGY 2 cut(s) 711, 1215
BstPI GGTNACC 1 cut(s) 577
BstSCI CCNGG 6 cut(s) 155, 211, 811, 1344, 1450, 1554
BstSFI CTRYAG 1 cut(s) 387
BstSLI GKGCMC 1 cut(s) 383
BstUI CGCG 2 cut(s) 168, 360
BstV1I GCAGC 3 cut(s) 39, 373, 1102
BstX2I RGATCY 4 cut(s) 459, 733, 895, 1360
BstYI RGATCY 4 cut(s) 459, 733, 895, 1360
BsuI GTATCC 1 cut(s) 1280
BsuRI GGCC 5 cut(s) 61, 229, 371, 442, 1262
BtgZI GCGATG 1 cut(s) 990
BtsCI GGATG 4 cut(s) 608, 842, 1180, 1610
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 4 cut(s) 178, 381, 471, 1315
Cac8I GCNNGC 1 cut(s) 444
CciI TCATGA 1 cut(s) 1616
CfoI GCGC 2 cut(s) 168, 513
Cfr10I RCCGGY 1 cut(s) 221
Cfr13I GGNCC 3 cut(s) 1400, 1436, 1552
Csp6I GTAC 4 cut(s) 556, 691, 1056, 1279
CspAI ACCGGT 1 cut(s) 221
CviQI GTAC 4 cut(s) 556, 691, 1056, 1279
DdeI CTNAG 1 cut(s) 474
DpnI GATC 7 cut(s) 233, 461, 651, 735, 897, 1362, 1547
DpnII GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
DraI TTTAAA 1 cut(s) 1513
EaeI YGGCCR 2 cut(s) 227, 369
Eam1104I CTCTTC 4 cut(s) 48, 552, 622, 722
EarI CTCTTC 4 cut(s) 48, 552, 622, 722
Eco130I CCWWGG 3 cut(s) 38, 1062, 1390
Eco47I GGWCC 3 cut(s) 1400, 1436, 1552
Eco88I CYCGRG 1 cut(s) 248
Eco91I GGTNACC 1 cut(s) 577
EcoNI CCTNNNNNAGG 2 cut(s) 1428, 1572
EcoO109I RGGNCCY 1 cut(s) 1436
EcoO65I GGTNACC 1 cut(s) 577
EcoRII CCWGG 4 cut(s) 155, 211, 811, 1450
EcoT14I CCWWGG 3 cut(s) 38, 1062, 1390
EcoT22I ATGCAT 1 cut(s) 1494
ErhI CCWWGG 3 cut(s) 38, 1062, 1390
FalI AAGNNNNNCTT 2 cut(s) 680, 712
FaqI GGGAC 2 cut(s) 263, 508
FauNDI CATATG 1 cut(s) 1417
FbaI TGATCA 1 cut(s) 1545
FblI GTMKAC 2 cut(s) 672, 712
Fnu4HI GCNGC 3 cut(s) 28, 387, 1091
FokI GGATG 4 cut(s) 595, 829, 1187, 1597
Fsp4HI GCNGC 3 cut(s) 28, 387, 1091
FspBI CTAG 6 cut(s) 194, 743, 755, 921, 951, 1506
FspI TGCGCA 1 cut(s) 512
GlaI GCGC 2 cut(s) 167, 512
GluI GCNGC 3 cut(s) 28, 387, 1091
HaeIII GGCC 5 cut(s) 61, 229, 371, 442, 1262
HapII CCGG 3 cut(s) 222, 1346, 1556
HhaI GCGC 2 cut(s) 168, 513
Hin6I GCGC 2 cut(s) 166, 511
HinP1I GCGC 2 cut(s) 166, 511
HinfI GANTC 8 cut(s) 362, 497, 502, 714, 761, 998, 1142, 1294
HpaII CCGG 3 cut(s) 222, 1346, 1556
HphI GGTGA 1 cut(s) 571
Hpy166II GTNNAC 5 cut(s) 188, 381, 673, 693, 713
Hpy188I TCNGA 3 cut(s) 654, 1003, 1247
Hpy188III TCNNGA 8 cut(s) 343, 593, 856, 938, 1364, 1474, 1532, 1617
Hpy8I GTNNAC 5 cut(s) 188, 381, 673, 693, 713
Hpy99I CGWCG 1 cut(s) 628
HpyAV CCTTC 5 cut(s) 706, 853, 988, 1148, 1277
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 7 cut(s) 333, 381, 389, 446, 1139, 1183, 1492
HpyF10VI GCNNNNNNNGC 3 cut(s) 174, 839, 1217
HpyF3I CTNAG 1 cut(s) 474
HspAI GCGC 2 cut(s) 166, 511
Ksp22I TGATCA 1 cut(s) 1545
Kzo9I GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
LguI GCTCTTC 1 cut(s) 552
LmnI GCTCC 3 cut(s) 73, 1203, 1411
Lsp1109I GCAGC 3 cut(s) 39, 373, 1102
LweI GCATC 3 cut(s) 532, 851, 1099
MaeI CTAG 6 cut(s) 194, 743, 755, 921, 951, 1506
MaeIII GTNAC 4 cut(s) 577, 926, 1311, 1501
MalI GATC 7 cut(s) 233, 461, 651, 735, 897, 1362, 1547
MboI GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
MboII GAAGA 8 cut(s) 65, 469, 539, 609, 709, 771, 896, 1198
MfeI CAATTG 1 cut(s) 14
MflI RGATCY 4 cut(s) 459, 733, 895, 1360
MhlI GDGCHC 2 cut(s) 102, 383
MluCI AATT 6 cut(s) 14, 398, 765, 821, 864, 1239
MlyI GAGTC 3 cut(s) 506, 708, 770
Mph1103I ATGCAT 1 cut(s) 1494
MseI TTAA 8 cut(s) 86, 144, 150, 162, 722, 879, 1119, 1512
MslI CAYNNNNRTG 4 cut(s) 328, 1064, 1104, 1615
MspCI CTTAAG 1 cut(s) 161
MspI CCGG 3 cut(s) 222, 1346, 1556
MspR9I CCNGG 6 cut(s) 157, 213, 813, 1346, 1452, 1556
MunI CAATTG 1 cut(s) 14
MvaI CCWGG 4 cut(s) 157, 213, 813, 1452
MvnI CGCG 2 cut(s) 168, 360
MwoI GCNNNNNNNGC 3 cut(s) 174, 839, 1217
NciI CCSGG 2 cut(s) 1346, 1556
NdeI CATATG 1 cut(s) 1417
NdeII GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
NlaIV GGNNCC 4 cut(s) 178, 735, 1388, 1554
NmuCI GTSAC 2 cut(s) 577, 1501
NsbI TGCGCA 1 cut(s) 512
NsiI ATGCAT 1 cut(s) 1494
NspI RCATGY 2 cut(s) 711, 1215
NspV TTCGAA 1 cut(s) 410
OliI CACNNNNGTG 1 cut(s) 1064
PaeR7I CTCGAG 1 cut(s) 248
PagI TCATGA 1 cut(s) 1616
PciSI GCTCTTC 1 cut(s) 552
PcsI WCGNNNNNNNCGW 1 cut(s) 1041
PfeI GAWTC 5 cut(s) 362, 502, 998, 1142, 1294
Pfl23II CGTACG 1 cut(s) 1278
PflFI GACNNNGTC 1 cut(s) 575
PfoI TCCNGGA 1 cut(s) 1450
PinAI ACCGGT 1 cut(s) 221
PkrI GCNGC 3 cut(s) 29, 388, 1092
PleI GAGTC 3 cut(s) 505, 708, 769
PpsI GAGTC 3 cut(s) 505, 708, 769
PpuMI RGGWCCY 1 cut(s) 1436
Psp5II RGGWCCY 1 cut(s) 1436
Psp6I CCWGG 4 cut(s) 155, 211, 811, 1450
PspEI GGTNACC 1 cut(s) 577
PspGI CCWGG 4 cut(s) 155, 211, 811, 1450
PspLI CGTACG 1 cut(s) 1278
PspN4I GGNNCC 4 cut(s) 178, 735, 1388, 1554
PspPI GGNCC 3 cut(s) 1400, 1436, 1552
PspPPI RGGWCCY 1 cut(s) 1436
PspXI VCTCGAGB 1 cut(s) 248
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 4 cut(s) 459, 733, 895, 1360
PsyI GACNNNGTC 1 cut(s) 575
RsaI GTAC 4 cut(s) 557, 692, 1057, 1280
RsaNI GTAC 4 cut(s) 556, 691, 1056, 1279
RseI CAYNNNNRTG 4 cut(s) 328, 1064, 1104, 1615
SapI GCTCTTC 1 cut(s) 552
SaqAI TTAA 8 cut(s) 86, 144, 150, 162, 722, 879, 1119, 1512
SatI GCNGC 3 cut(s) 28, 387, 1091
Sau3AI GATC 7 cut(s) 231, 459, 649, 733, 895, 1360, 1545
Sau96I GGNCC 3 cut(s) 1400, 1436, 1552
SchI GAGTC 3 cut(s) 506, 708, 770
ScrFI CCNGG 6 cut(s) 157, 213, 813, 1346, 1452, 1556
SduI GDGCHC 2 cut(s) 102, 383
SfaNI GCATC 3 cut(s) 532, 851, 1099
SfcI CTRYAG 1 cut(s) 387
Sfr274I CTCGAG 1 cut(s) 248
SfuI TTCGAA 1 cut(s) 410
SinI GGWCC 3 cut(s) 1400, 1436, 1552
SlaI CTCGAG 1 cut(s) 248
SmiI ATTTAAAT 1 cut(s) 1513
SmiMI CAYNNNNRTG 4 cut(s) 328, 1064, 1104, 1615
SmlI CTYRAG 4 cut(s) 161, 200, 248, 533
SmoI CTYRAG 4 cut(s) 161, 200, 248, 533
SpeI ACTAGT 1 cut(s) 920
Sse9I AATT 6 cut(s) 14, 398, 765, 821, 864, 1239
SspI AATATT 2 cut(s) 148, 1196
SspMI CTAG 6 cut(s) 194, 743, 755, 921, 951, 1506
StyD4I CCNGG 6 cut(s) 155, 211, 811, 1344, 1450, 1554
StyI CCWWGG 3 cut(s) 38, 1062, 1390
SwaI ATTTAAAT 1 cut(s) 1513
TaaI ACNGT 1 cut(s) 173
TaqI TCGA 7 cut(s) 249, 410, 500, 838, 1070, 1374, 1441
TasI AATT 6 cut(s) 14, 398, 765, 821, 864, 1239
TatI WGTACW 1 cut(s) 690
TfiI GAWTC 5 cut(s) 362, 502, 998, 1142, 1294
Tru1I TTAA 8 cut(s) 86, 144, 150, 162, 722, 879, 1119, 1512
Tru9I TTAA 8 cut(s) 86, 144, 150, 162, 722, 879, 1119, 1512
TscAI CASTG 4 cut(s) 178, 388, 478, 1322
TseFI GTSAC 2 cut(s) 577, 1501
TseI GCWGC 3 cut(s) 27, 386, 1090
Tsp45I GTSAC 2 cut(s) 577, 1501
TspDTI ATGAA 9 cut(s) 280, 778, 896, 1007, 1188, 1205, 1322, 1404, 1477
TspRI CASTG 4 cut(s) 178, 388, 478, 1322
Tth111I GACNNNGTC 1 cut(s) 575
Vha464I CTTAAG 1 cut(s) 161
VneI GTGCAC 1 cut(s) 379
VpaK11BI GGWCC 3 cut(s) 1400, 1436, 1552
XagI CCTNNNNNAGG 2 cut(s) 1428, 1572
XapI RAATTY 2 cut(s) 398, 821
XceI RCATGY 2 cut(s) 711, 1215
XcmI CCANNNNNNNNNTGG 1 cut(s) 589
XhoI CTCGAG 1 cut(s) 248
XmiI GTMKAC 2 cut(s) 672, 712
XspI CTAG 6 cut(s) 194, 743, 755, 921, 951, 1506
Zsp2I ATGCAT 1 cut(s) 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.