RLG00000001838

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000192
Physical Location & Seq
Reverse (-)
21595473 .. 21601631
6159 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001838

Sequence Viewer

Length: 1812 bp
ATGGAAATGGAGATGCTTATCCTTTCAGTGCTAGTTCTCTTTGTTTCTTTCTACTATGTTTTTCGTATGTTGAATAGAAATGCTAGCAAAAATGAAGTTCATCATCATCATCATCAGCTTCAGCTCCCACCAGGAAGCTCAGGTTGGCCCACCATCGGTGAAGGCCTTGCATTGTTGATGACAGCCAAAAGGGGTGTCCCGGAGAAGTTCATAGGAGAAAGGAGGATCAAGTACTCATCATCAGATTCCAAAAGCAAAAGCAGCAGCTGCAAGGTGTTCACCACATCGTTGCTGCGTGAATCCATGGCGGTGCTATGTTCGGCCGCTGGAAACAAGTTCCTGTTTTCGAACGAGAACAAACTCGTCAAGTCATGGTGGCCTGCTAACATCGACACCATCTTTGCCAGCTCCAACAAAACAAACACCGCCGAGGAGTCCATTCATCACCGCAAAGTTCTATCTCCGTTTCTCGGCCCCGATTCTCTCCGAAAGTACTTAGGGATCATGGATGCTGTCACCAAACGTCACCTGGACCTGTTCTGGTCGGATAAAAAACAAGTCAAAGTTCTAGCCCTAACAAAGATGCACACCTTCACATTGGTATGTAAAATCTTCTTAAACGTGGAGGATCCAGCAGTGATTGCCAAACTAGAGAAGCCAATTCAGCATATTGCAGCAGGCTTCATTTCATTGCCCATAAATCTGCCTGGCACAGCATTCAACCGAGCCATCCAGGCATCCAAGCAGGTCAGGAAGGCCCTTGAAAAAATGGTTAAACAGAGGAGAATAGATCTAGATACAGCTGTGGCAGCAGATGAAAATAATAATAATCAAGATTTAATGTCTAAGTTGCTGCTGGAGAAATATAGCGACGGCCAACAAATGAACGAAACCGACATCGCCAACAAGTTAAATGGTCTACTCATTGCTGCTTATGACAATATATTCATCACCTTGTGTTCTATCATCATGTATCTATCGGAGCTTCCTACAGTTTATGATGCCGTCCTTAAAGAGCAAATGGAGATAGCAGATTCAAAAGCAGAAGGAGAGTTGCTTAACTGGGAGGACATACAAAAAATGAAATACACATGGAATGTTGTATGTGAAGTGTTGAGATTGGAGCCGCCAAATCCTGGAACGTTTAGAGAGGCCATGACCGACTTTGTCTATGAAGGATATCTGATTCCTAAAGGAATGAAGTTATACTGGAGTGTGTTTTCGACACATAAAAACCCAGAGTACTTCCCAGATCCGAAAAAGTTCGACCCATCAAGGTTCGACAGAGGAGGACCAGCTCCTTTTTCATACGTCCCATTTGGAGGAGGACCGCGGATGTGCCCTGGAAGAGAATATGTTCGCTTTACGATTTTGGTTTTCATGCATAACTTGGTCACCAGATTTAGGTGGGAGAAGGTTTTTCCTAACGAGAAAATGGTGATGACCCCATTTCTTCTTCCTACCAAAGGACTTCCAGTTCGCCTTTATCCTCATCTATCAACATCATCACTGAAATCCGGGTGTGCACCAACTGGTGTTGCATATGCCTTGAGACCATCACGGCTCTTGCTCCCCCCACCGTCGCTATCAAGTCTTGCAGCTGTTTGGGCTGATTGCAGCAATGGCCTAAACCACGTCGTGCTTCCAGCCGACACTCTGGTCGGTCATTGCAAAATCAGGGCTCGAGTCGCCAAGGTCCTCATGGCACTCTCCGGAGGAGCTTGGGATTTCGACACTGCTGACAAGAGTTTGGAAGCGCTTGTGTTGAGGAATAAAGTTGAGATTGAGCTTAACAACCAGGGATGTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

604

Amino Acids

67.86

Weight (kDa)

9.12

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 91 - 490 4.2e-56 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1658
Acc36I ACCTGC 1 cut(s) 736
AccB7I CCANNNNNTGG 1 cut(s) 1136
AccI GTMKAC 1 cut(s) 919
AccII CGCG 1 cut(s) 1333
AccIII TCCGGA 1 cut(s) 1712
AciI CCGC 7 cut(s) 308, 324, 426, 448, 1127, 1331, 1333
AclI AACGTT 1 cut(s) 1142
AclWI GGATC 5 cut(s) 233, 509, 623, 636, 1247
AcoI YGGCCR 2 cut(s) 321, 874
AcuI CTGAAG 1 cut(s) 104
AdeI CACNNNGTG 2 cut(s) 957, 1639
AfaI GTAC 3 cut(s) 233, 494, 1244
AfeI AGCGCT 1 cut(s) 1758
AfiI CCNNNNNNNGG 6 cut(s) 155, 470, 1136, 1322, 1404, 1466
AgsI TTSAA 4 cut(s) 73, 721, 764, 1038
AjiI CACGTC 1 cut(s) 1636
AjnI CCWGG 7 cut(s) 130, 528, 706, 732, 1135, 1342, 1797
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AloI GAACNNNNNNTCC 2 cut(s) 1461, 1493
Alw21I GWGCWC 1 cut(s) 1528
Alw26I GTCTC 1 cut(s) 1546
Alw44I GTGCAC 1 cut(s) 1524
AlwI GGATC 5 cut(s) 233, 509, 623, 636, 1247
AlwNI CAGNNNCTG 1 cut(s) 267
Ama87I CYCGRG 1 cut(s) 1683
Aor13HI TCCGGA 1 cut(s) 1712
Aor51HI AGCGCT 1 cut(s) 1758
AoxI GGCC 9 cut(s) 146, 163, 321, 377, 472, 756, 874, 1152, 1624
ApaLI GTGCAC 1 cut(s) 1524
ArsI GACNNNNNNTTYG 6 cut(s) 180, 212, 383, 415, 1461, 1493
Asp700I GAANNNNTTC 2 cut(s) 1262, 1356
AspLEI GCGC 1 cut(s) 1759
AspS9I GGNCC 7 cut(s) 147, 473, 532, 757, 1292, 1328, 1696
AsuC2I CCSGG 2 cut(s) 200, 1519
AsuHPI GGTGA 8 cut(s) 170, 271, 437, 508, 518, 943, 1387, 1450
AsuII TTCGAA 1 cut(s) 347
AsuNHI GCTAGC 1 cut(s) 83
AvaI CYCGRG 1 cut(s) 1683
AvaII GGWCC 4 cut(s) 532, 1292, 1328, 1696
BaeGI GKGCMC 2 cut(s) 1343, 1528
BaeI ACNNNNGTAYC 2 cut(s) 789, 822
BamHI GGATCC 1 cut(s) 628
BanII GRGCYC 1 cut(s) 1684
Bbv12I GWGCWC 1 cut(s) 1528
BccI CCATC 5 cut(s) 161, 404, 737, 1279, 1564
BceAI ACGGC 3 cut(s) 889, 989, 1577
BciT130I CCWGG 7 cut(s) 132, 530, 708, 734, 1137, 1344, 1799
BcnI CCSGG 2 cut(s) 200, 1519
BcoDI GTCTC 1 cut(s) 1546
BfaI CTAG 6 cut(s) 32, 84, 569, 650, 794, 1810
BfmI CTRYAG 1 cut(s) 990
BfoI RGCGCY 1 cut(s) 1760
BfuAI ACCTGC 1 cut(s) 736
BglI GCCNNNNNGGC 1 cut(s) 734
BglII AGATCT 1 cut(s) 790
BmcAI AGTACT 3 cut(s) 233, 494, 1244
Bme1390I CCNGG 9 cut(s) 132, 200, 530, 708, 734, 1137, 1344, 1519, 1799
Bme18I GGWCC 4 cut(s) 532, 1292, 1328, 1696
BmeT110I CYCGRG 1 cut(s) 1683
BmgBI CACGTC 1 cut(s) 1636
BmgT120I GGNCC 7 cut(s) 147, 473, 532, 757, 1292, 1328, 1696
BmiI GGNNCC 3 cut(s) 475, 630, 1125
BmrFI CCNGG 9 cut(s) 132, 200, 530, 708, 734, 1137, 1344, 1519, 1799
BmrI ACTGGG 1 cut(s) 1072
BmsI GCATC 5 cut(s) 3, 499, 573, 746, 991
BmtI GCTAGC 1 cut(s) 87
BmuI ACTGGG 1 cut(s) 1072
BpmI CTGGAG 2 cut(s) 878, 1231
Bpu10I CCTNAGC 1 cut(s) 139
Bpu14I TTCGAA 1 cut(s) 347
BpuEI CTTGAG 1 cut(s) 1570
BpuMI CCSGG 2 cut(s) 200, 1519
BsaBI GATNNNNATC 1 cut(s) 17
BsaI GGTCTC 1 cut(s) 1546
BsaJI CCNNGG 6 cut(s) 303, 429, 1331, 1342, 1692, 1798
BsaWI WCCGGW 1 cut(s) 1712
Bsc4I CCNNNNNNNGG 6 cut(s) 155, 470, 1136, 1322, 1404, 1466
Bse1I ACTGG 4 cut(s) 1067, 1214, 1475, 1537
Bse3DI GCAATG 4 cut(s) 689, 924, 1627, 1666
Bse8I GATNNNNATC 1 cut(s) 17
BseAI TCCGGA 1 cut(s) 1712
BseBI CCWGG 7 cut(s) 132, 530, 708, 734, 1137, 1344, 1799
BseDI CCNNGG 6 cut(s) 303, 429, 1331, 1342, 1692, 1798
BseGI GGATG 5 cut(s) 514, 729, 737, 1341, 1808
BseJI GATNNNNATC 1 cut(s) 17
BseLI CCNNNNNNNGG 6 cut(s) 155, 470, 1136, 1322, 1404, 1466
BseMI GCAATG 4 cut(s) 689, 924, 1627, 1666
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 4 cut(s) 1067, 1214, 1475, 1537
BseRI GAGGAG 5 cut(s) 446, 796, 1302, 1338, 1731
BseSI GKGCMC 2 cut(s) 1343, 1528
BseX3I CGGCCG 1 cut(s) 321
Bsh1236I CGCG 1 cut(s) 1333
Bsh1285I CGRYCG 1 cut(s) 324
BshFI GGCC 9 cut(s) 148, 165, 323, 379, 474, 758, 876, 1154, 1626
BsiEI CGRYCG 1 cut(s) 324
BsiHKAI GWGCWC 1 cut(s) 1528
BsiHKCI CYCGRG 1 cut(s) 1683
BsiSI CCGG 3 cut(s) 200, 1518, 1713
BslFI GGGAC 2 cut(s) 182, 1298
BslI CCNNNNNNNGG 6 cut(s) 155, 470, 1136, 1322, 1404, 1466
BsmAI GTCTC 1 cut(s) 1546
BsmFI GGGAC 2 cut(s) 182, 1298
BsmI GAATGC 1 cut(s) 716
BsnI GGCC 9 cut(s) 148, 165, 323, 379, 474, 758, 876, 1154, 1626
Bso31I GGTCTC 1 cut(s) 1546
BsoBI CYCGRG 1 cut(s) 1683
Bsp119I TTCGAA 1 cut(s) 347
Bsp1286I GDGCHC 3 cut(s) 1343, 1528, 1684
Bsp13I TCCGGA 1 cut(s) 1712
Bsp143I GATC 5 cut(s) 225, 501, 628, 790, 1252
Bsp19I CCATGG 1 cut(s) 303
BspACI CCGC 7 cut(s) 308, 324, 426, 448, 1127, 1331, 1333
BspANI GGCC 9 cut(s) 148, 165, 323, 379, 474, 758, 876, 1154, 1626
BspCNI CTCAG 1 cut(s) 152
BspEI TCCGGA 1 cut(s) 1712
BspFNI CGCG 1 cut(s) 1333
BspLI GGNNCC 3 cut(s) 475, 630, 1125
BspMI ACCTGC 1 cut(s) 736
BspOI GCTAGC 1 cut(s) 87
BspPI GGATC 5 cut(s) 233, 509, 623, 636, 1247
BspT104I TTCGAA 1 cut(s) 347
BspTNI GGTCTC 1 cut(s) 1546
BsrDI GCAATG 4 cut(s) 689, 924, 1627, 1666
BsrI ACTGG 4 cut(s) 1067, 1214, 1475, 1537
BssECI CCNNGG 6 cut(s) 303, 429, 1331, 1342, 1692, 1798
BssMI GATC 5 cut(s) 225, 501, 628, 790, 1252
BssT1I CCWWGG 2 cut(s) 303, 1692
Bst2UI CCWGG 7 cut(s) 132, 530, 708, 734, 1137, 1344, 1799
Bst4CI ACNGT 2 cut(s) 994, 1581
Bst6I CTCTTC 1 cut(s) 1342
BstAPI GCANNNNNTGC 2 cut(s) 267, 641
BstBI TTCGAA 1 cut(s) 347
BstC8I GCNNGC 4 cut(s) 85, 381, 406, 679
BstDEI CTNAG 3 cut(s) 139, 496, 846
BstDSI CCRYGG 2 cut(s) 303, 1331
BstEII GGTNACC 1 cut(s) 1393
BstENI CCTNNNNNAGG 1 cut(s) 1464
BstF5I GGATG 5 cut(s) 514, 729, 737, 1341, 1808
BstFNI CGCG 1 cut(s) 1333
BstH2I RGCGCY 1 cut(s) 1760
BstHHI GCGC 1 cut(s) 1759
BstKTI GATC 5 cut(s) 228, 504, 631, 793, 1255
BstMAI GTCTC 1 cut(s) 1546
BstMBI GATC 5 cut(s) 225, 501, 628, 790, 1252
BstMCI CGRYCG 1 cut(s) 324
BstMWI GCNNNNNNNGC 9 cut(s) 261, 267, 641, 664, 734, 809, 1607, 1623, 1688
BstNI CCWGG 7 cut(s) 132, 530, 708, 734, 1137, 1344, 1799
BstPI GGTNACC 1 cut(s) 1393
BstSCI CCNGG 9 cut(s) 130, 198, 528, 706, 732, 1135, 1342, 1517, 1797
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 2 cut(s) 1343, 1528
BstUI CGCG 1 cut(s) 1333
BstX2I RGATCY 3 cut(s) 628, 790, 1252
BstYI RGATCY 3 cut(s) 628, 790, 1252
BstZI CGGCCG 1 cut(s) 321
BsuRI GGCC 9 cut(s) 148, 165, 323, 379, 474, 758, 876, 1154, 1626
BtgI CCRYGG 2 cut(s) 303, 1331
BtgZI GCGATG 1 cut(s) 883
BtrI CACGTC 1 cut(s) 1636
BtsCI GGATG 5 cut(s) 514, 729, 737, 1341, 1808
BtsI GCAGTG 2 cut(s) 642, 1734
BtsIMutI CAGTG 4 cut(s) 33, 642, 1508, 1734
BveI ACCTGC 1 cut(s) 736
Cac8I GCNNGC 4 cut(s) 85, 381, 406, 679
CaiI CAGNNNCTG 1 cut(s) 267
CfoI GCGC 1 cut(s) 1759
Cfr13I GGNCC 7 cut(s) 147, 473, 532, 757, 1292, 1328, 1696
Cfr42I CCGCGG 1 cut(s) 1334
Csp6I GTAC 3 cut(s) 232, 493, 1243
CviAII CATG 8 cut(s) 304, 372, 505, 970, 1092, 1156, 1381, 1702
CviQI GTAC 3 cut(s) 232, 493, 1243
DdeI CTNAG 3 cut(s) 139, 496, 846
DpnI GATC 5 cut(s) 227, 503, 630, 792, 1254
DpnII GATC 5 cut(s) 225, 501, 628, 790, 1252
DraIII CACNNNGTG 2 cut(s) 957, 1639
DrdI GACNNNNNNGTC 1 cut(s) 1658
DseDI GACNNNNNNGTC 1 cut(s) 1658
EaeI YGGCCR 2 cut(s) 321, 874
EagI CGGCCG 1 cut(s) 321
Eam1104I CTCTTC 1 cut(s) 1342
EarI CTCTTC 1 cut(s) 1342
EclXI CGGCCG 1 cut(s) 321
Eco130I CCWWGG 2 cut(s) 303, 1692
Eco147I AGGCCT 1 cut(s) 165
Eco24I GRGCYC 1 cut(s) 1684
Eco31I GGTCTC 1 cut(s) 1546
Eco32I GATATC 1 cut(s) 1181
Eco47I GGWCC 4 cut(s) 532, 1292, 1328, 1696
Eco47III AGCGCT 1 cut(s) 1758
Eco52I CGGCCG 1 cut(s) 321
Eco57I CTGAAG 1 cut(s) 104
Eco88I CYCGRG 1 cut(s) 1683
Eco91I GGTNACC 1 cut(s) 1393
EcoNI CCTNNNNNAGG 1 cut(s) 1464
EcoO109I RGGNCCY 2 cut(s) 757, 1696
EcoO65I GGTNACC 1 cut(s) 1393
EcoRII CCWGG 7 cut(s) 130, 528, 706, 732, 1135, 1342, 1797
EcoRV GATATC 1 cut(s) 1181
EcoT14I CCWWGG 2 cut(s) 303, 1692
EcoT22I ATGCAT 1 cut(s) 1386
EcoT38I GRGCYC 1 cut(s) 1684
ErhI CCWWGG 2 cut(s) 303, 1692
FaeI CATG 8 cut(s) 307, 375, 508, 973, 1095, 1159, 1384, 1705
FaqI GGGAC 2 cut(s) 182, 1298
FatI CATG 8 cut(s) 303, 371, 504, 969, 1091, 1155, 1380, 1701
FauNDI CATATG 1 cut(s) 1543
FblI GTMKAC 1 cut(s) 919
FokI GGATG 4 cut(s) 521, 716, 724, 1348
FriOI GRGCYC 1 cut(s) 1684
FspBI CTAG 6 cut(s) 32, 84, 569, 650, 794, 1810
GlaI GCGC 1 cut(s) 1758
GsuI CTGGAG 2 cut(s) 878, 1231
HaeII RGCGCY 1 cut(s) 1760
HaeIII GGCC 9 cut(s) 148, 165, 323, 379, 474, 758, 876, 1154, 1626
HapII CCGG 3 cut(s) 200, 1518, 1713
HhaI GCGC 1 cut(s) 1759
Hin1II CATG 8 cut(s) 307, 375, 508, 973, 1095, 1159, 1384, 1705
Hin6I GCGC 1 cut(s) 1757
HinP1I GCGC 1 cut(s) 1757
HinfI GANTC 7 cut(s) 245, 299, 434, 479, 1034, 1186, 1686
HpaII CCGG 3 cut(s) 200, 1518, 1713
HphI GGTGA 8 cut(s) 170, 271, 437, 508, 518, 943, 1387, 1450
Hpy166II GTNNAC 3 cut(s) 279, 920, 1526
Hpy188I TCNGA 6 cut(s) 244, 488, 547, 982, 1185, 1257
Hpy188III TCNNGA 4 cut(s) 751, 794, 833, 1713
Hpy8I GTNNAC 3 cut(s) 279, 920, 1526
Hpy99I CGWCG 3 cut(s) 875, 1585, 1640
HpyAV CCTTC 6 cut(s) 155, 601, 748, 1040, 1169, 1408
HpyCH4III ACNGT 2 cut(s) 994, 1581
HpyCH4IV ACGT 5 cut(s) 523, 621, 1142, 1311, 1635
HpyF10VI GCNNNNNNNGC 9 cut(s) 261, 267, 641, 664, 734, 809, 1607, 1623, 1688
HpyF3I CTNAG 3 cut(s) 139, 496, 846
HpySE526I ACGT 5 cut(s) 523, 621, 1142, 1311, 1635
Hsp92II CATG 8 cut(s) 307, 375, 508, 973, 1095, 1159, 1384, 1705
HspAI GCGC 1 cut(s) 1757
Kpn2I TCCGGA 1 cut(s) 1712
KspI CCGCGG 1 cut(s) 1334
Kzo9I GATC 5 cut(s) 225, 501, 628, 790, 1252
LmnI GCTCC 7 cut(s) 129, 413, 982, 1123, 1303, 1575, 1718
LweI GCATC 5 cut(s) 3, 499, 573, 746, 991
MaeI CTAG 6 cut(s) 32, 84, 569, 650, 794, 1810
MaeII ACGT 5 cut(s) 523, 621, 1142, 1311, 1635
MaeIII GTNAC 3 cut(s) 514, 524, 1393
MalI GATC 5 cut(s) 227, 503, 630, 792, 1254
MboI GATC 5 cut(s) 225, 501, 628, 790, 1252
MboII GAAGA 4 cut(s) 604, 1359, 1445, 1448
MflI RGATCY 3 cut(s) 628, 790, 1252
MhlI GDGCHC 3 cut(s) 1343, 1528, 1684
MluCI AATT 1 cut(s) 660
MlyI GAGTC 2 cut(s) 443, 1695
MmeI TCCRAC 2 cut(s) 435, 525
Mph1103I ATGCAT 1 cut(s) 1386
MroI TCCGGA 1 cut(s) 1712
MroXI GAANNNNTTC 2 cut(s) 1262, 1356
MseI TTAA 7 cut(s) 617, 774, 839, 911, 1011, 1059, 1791
MslI CAYNNNNRTG 2 cut(s) 308, 601
MspA1I CMGCKG 5 cut(s) 267, 326, 803, 1333, 1601
MspI CCGG 3 cut(s) 200, 1518, 1713
MspR9I CCNGG 9 cut(s) 132, 200, 530, 708, 734, 1137, 1344, 1519, 1799
Mva1269I GAATGC 1 cut(s) 716
MvaI CCWGG 7 cut(s) 132, 530, 708, 734, 1137, 1344, 1799
MvnI CGCG 1 cut(s) 1333
MwoI GCNNNNNNNGC 9 cut(s) 261, 267, 641, 664, 734, 809, 1607, 1623, 1688
NciI CCSGG 2 cut(s) 200, 1519
NcoI CCATGG 1 cut(s) 303
NdeI CATATG 1 cut(s) 1543
NdeII GATC 5 cut(s) 225, 501, 628, 790, 1252
NheI GCTAGC 1 cut(s) 83
NlaIII CATG 8 cut(s) 307, 375, 508, 973, 1095, 1159, 1384, 1705
NlaIV GGNNCC 3 cut(s) 475, 630, 1125
NmeAIII GCCGAG 2 cut(s) 450, 454
NmuCI GTSAC 3 cut(s) 514, 524, 1393
NsiI ATGCAT 1 cut(s) 1386
NspV TTCGAA 1 cut(s) 347
PaeR7I CTCGAG 1 cut(s) 1683
PceI AGGCCT 1 cut(s) 165
PctI GAATGC 1 cut(s) 716
PdmI GAANNNNTTC 2 cut(s) 1262, 1356
PfeI GAWTC 5 cut(s) 245, 299, 479, 1034, 1186
PflFI GACNNNGTC 1 cut(s) 1166
PflMI CCANNNNNTGG 1 cut(s) 1136
PfoI TCCNGGA 2 cut(s) 198, 1135
PleI GAGTC 2 cut(s) 442, 1694
PpsI GAGTC 2 cut(s) 442, 1694
PpuMI RGGWCCY 1 cut(s) 1696
Psp1406I AACGTT 1 cut(s) 1142
Psp5II RGGWCCY 1 cut(s) 1696
Psp6I CCWGG 7 cut(s) 130, 528, 706, 732, 1135, 1342, 1797
PspEI GGTNACC 1 cut(s) 1393
PspGI CCWGG 7 cut(s) 130, 528, 706, 732, 1135, 1342, 1797
PspN4I GGNNCC 3 cut(s) 475, 630, 1125
PspPI GGNCC 7 cut(s) 147, 473, 532, 757, 1292, 1328, 1696
PspPPI RGGWCCY 1 cut(s) 1696
PspXI VCTCGAGB 1 cut(s) 1683
PstNI CAGNNNCTG 1 cut(s) 267
PsuI RGATCY 3 cut(s) 628, 790, 1252
PsyI GACNNNGTC 1 cut(s) 1166
PvuII CAGCTG 3 cut(s) 267, 803, 1601
RsaI GTAC 3 cut(s) 233, 494, 1244
RsaNI GTAC 3 cut(s) 232, 493, 1243
RseI CAYNNNNRTG 2 cut(s) 308, 601
SacII CCGCGG 1 cut(s) 1334
SaqAI TTAA 7 cut(s) 617, 774, 839, 911, 1011, 1059, 1791
Sau3AI GATC 5 cut(s) 225, 501, 628, 790, 1252
Sau96I GGNCC 7 cut(s) 147, 473, 532, 757, 1292, 1328, 1696
ScaI AGTACT 3 cut(s) 233, 494, 1244
SchI GAGTC 2 cut(s) 443, 1695
ScrFI CCNGG 9 cut(s) 132, 200, 530, 708, 734, 1137, 1344, 1519, 1799
SduI GDGCHC 3 cut(s) 1343, 1528, 1684
SfaNI GCATC 5 cut(s) 3, 499, 573, 746, 991
SfcI CTRYAG 1 cut(s) 990
Sfr274I CTCGAG 1 cut(s) 1683
Sfr303I CCGCGG 1 cut(s) 1334
SfuI TTCGAA 1 cut(s) 347
SgrBI CCGCGG 1 cut(s) 1334
SinI GGWCC 4 cut(s) 532, 1292, 1328, 1696
SlaI CTCGAG 1 cut(s) 1683
SmiMI CAYNNNNRTG 2 cut(s) 308, 601
SmlI CTYRAG 2 cut(s) 1549, 1683
SmoI CTYRAG 2 cut(s) 1549, 1683
Sse9I AATT 1 cut(s) 660
SseBI AGGCCT 1 cut(s) 165
SsiI CCGC 7 cut(s) 308, 324, 426, 448, 1127, 1331, 1333
SspMI CTAG 6 cut(s) 32, 84, 569, 650, 794, 1810
StuI AGGCCT 1 cut(s) 165
StyD4I CCNGG 9 cut(s) 130, 198, 528, 706, 732, 1135, 1342, 1517, 1797
StyI CCWWGG 2 cut(s) 303, 1692
TaaI ACNGT 2 cut(s) 994, 1581
TaiI ACGT 5 cut(s) 526, 624, 1145, 1314, 1638
TaqI TCGA 7 cut(s) 347, 390, 1223, 1266, 1281, 1684, 1731
TaqII GACCGA 2 cut(s) 1175, 1652
TasI AATT 1 cut(s) 660
TatI WGTACW 3 cut(s) 231, 492, 1242
TauI GCSGC 2 cut(s) 326, 1129
TfiI GAWTC 5 cut(s) 245, 299, 479, 1034, 1186
Tru1I TTAA 7 cut(s) 617, 774, 839, 911, 1011, 1059, 1791
Tru9I TTAA 7 cut(s) 617, 774, 839, 911, 1011, 1059, 1791
TscAI CASTG 4 cut(s) 33, 642, 1515, 1741
TseFI GTSAC 3 cut(s) 514, 524, 1393
Tsp45I GTSAC 3 cut(s) 514, 524, 1393
TspGWI ACGGA 1 cut(s) 453
TspRI CASTG 4 cut(s) 33, 642, 1515, 1741
Tth111I GACNNNGTC 1 cut(s) 1166
Van91I CCANNNNNTGG 1 cut(s) 1136
VneI GTGCAC 1 cut(s) 1524
VpaK11BI GGWCC 4 cut(s) 532, 1292, 1328, 1696
XagI CCTNNNNNAGG 1 cut(s) 1464
XbaI TCTAGA 1 cut(s) 793
XcmI CCANNNNNNNNNTGG 2 cut(s) 526, 1699
XhoI CTCGAG 1 cut(s) 1683
XmiI GTMKAC 1 cut(s) 919
XmnI GAANNNNTTC 2 cut(s) 1262, 1356
XspI CTAG 6 cut(s) 32, 84, 569, 650, 794, 1810
ZrmI AGTACT 3 cut(s) 233, 494, 1244
Zsp2I ATGCAT 1 cut(s) 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.