FvH4_5g18260

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000192
Physical Location & Seq
Forward (+)
10507430 .. 10509904
2475 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g18260.t1

Sequence Viewer

Length: 1536 bp
ATGGAGATGGAGATGCTCATCCTTTTTTTGCTGCTTCCCTTTGTTCCTCTCTATCTTTTTCGTTTGTTGAACAGTAATGCCCGCAAAAGTATTACTGAAGTTGATCATCACCATCAGCTCCAGCTCCCACCAGGAAGCTCAGGTTGGCCCATCATCGGTGAAGGCCTTGCTTTTCTGATGACAGCCAAAAGGGGTGTCCCGGAGAAGTTCATCGGAGATAGGAGGATCAAATTTTCGTCATCTTCACATTCCAAAAGCAGCATCTGCAAAGTGTTCACCACATCGTTGCTACGTGAATCAGTGGCGGTTCTGTGTACTGCCGCCGGAAACAAGTTCCTGTTTTCAAACGAGAACAAACTCGTCCACTCATGGTGGCCTGAAAACATCTACACCATCTTTGCCGGCTCCGACAGACCTGAATCCCACGAGGAGTCCATTCGACTTCGCAAAGTTCTGTCTCCATTTTTCAGCCCCAACTGTCTCCAAAAGTACGTAGGGATCATGGATGCCTTCACTAAACGTCATCTGGACGTGTTTTGGTCGGATAAAAAACAAGTCAAAGTTCTAGCCCTAACAAAGATGCACACCTTCGCATTGGTGTGTAAAATCTTCTTAAACGTGGAGGATCCATCAGTGATTGCCAAACTAGAGGAGCCGATTCAGCATATCGCAGCAGGCTTCATTGCGTTGCCGATAAATCTGCCTGGCACAGCGTTCAACCGAGCCATCAAAGCATCCATGCAAGTCCGGAAGGATCTTGAAGAAATGGTTCAACAGAGGAGAATCGATCTAGATCGATTTCGACAGACGGCTACTGCATCAGATGTAAATGAGAATAGTAATTATCAAGATTTGATGTCTAAGTTGCTGATGGACACATATAGCGACGGCCGACAGATGAAGGAAACCGACATCGCCGACATCGCCAACAAGTTAAATGGTCTACTCATTGCTGCTTATGACAACGTGTTCATCACCTTGTGTTCTATTGTCATGTATTTATCCGAGCTTTCTACAGTTTATGATGCCGTCCTGAAAGAGCAAATGGAGATAGCAAGTTCATCAAAAGCAGAAGGAGAGTTGCTCAACTGGGGTGACATACAAAAAATGAAATATACATGGAACGTCGTATGTGAAGTGTTGAGATTGGAGCCGCCAAATCCTGGAACTTTTAGAGAGGCAATGTCCGACTTTGTTTATGAAGGATATCTGATTCCAAAAGGAATGAAGTTATACTGGAGTGTGTTTTCGACACATAAAGACCCAGAGTACTTCCCAGATCCAAAGAAGTTCGACCCATCAAGGTTCGACGGAGGAGGACCGGCACCTTATTCGTATGTTCCATTTGGAGGAGGACCTCGGATGTGCCCTGGAAGAGAATATGCTCGTTTAACGATTCTGGTTTTCATGCATAACTTGATCACTAGATTCAGGTGGGAGAAGGTTTTTCCTGACGAGAAAATGGTGATGACCCCATTTCTTCTTCCTACCAAAGGACTTCCGGTTCGCCTTTATCCCCATACATCATCATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

512

Amino Acids

58.32

Weight (kDa)

8.47

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 90 - 499 3.8e-50 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000192)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1324
AccB7I CCANNNNNTGG 1 cut(s) 1163
AccI GTMKAC 1 cut(s) 943
AccIII TCCGGA 1 cut(s) 747
AciI CCGC 4 cut(s) 82, 305, 321, 1154
AclWI GGATC 6 cut(s) 233, 506, 620, 633, 762, 1274
AcoI YGGCCR 1 cut(s) 889
AcsI RAATTY 1 cut(s) 230
AcuI CTGAAG 1 cut(s) 117
AdeI CACNNNGTG 1 cut(s) 981
AfaI GTAC 3 cut(s) 316, 491, 1271
AfiI CCNNNNNNNGG 4 cut(s) 155, 1163, 1349, 1493
AflIII ACRYGT 2 cut(s) 531, 966
AgsI TTSAA 5 cut(s) 70, 345, 718, 761, 773
AjiI CACGTC 1 cut(s) 532
AjnI CCWGG 4 cut(s) 130, 703, 1162, 1369
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AloI GAACNNNNNNTCC 2 cut(s) 1488, 1520
AluBI AGCT 4 cut(s) 118, 124, 138, 1009
AluI AGCT 4 cut(s) 118, 124, 138, 1009
Alw26I GTCTC 2 cut(s) 462, 485
AlwI GGATC 6 cut(s) 233, 506, 620, 633, 762, 1274
AlwNI CAGNNNCTG 1 cut(s) 264
Aor13HI TCCGGA 1 cut(s) 747
AoxI GGCC 4 cut(s) 146, 163, 374, 889
ApeKI GCWGC 4 cut(s) 31, 258, 671, 953
ApoI RAATTY 1 cut(s) 230
ArsI GACNNNNNNTTYG 4 cut(s) 180, 212, 1488, 1520
Asp700I GAANNNNTTC 1 cut(s) 768
AspS9I GGNCC 3 cut(s) 147, 1319, 1355
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 6 cut(s) 101, 170, 268, 967, 1106, 1477
AvaII GGWCC 2 cut(s) 1319, 1355
BaeGI GKGCMC 1 cut(s) 1370
BamHI GGATCC 1 cut(s) 625
BanI GGYRCC 1 cut(s) 1324
BauI CACGAG 1 cut(s) 425
BbvI GCAGC 4 cut(s) 18, 270, 683, 940
BccI CCATC 7 cut(s) 120, 158, 401, 637, 734, 865, 1306
BceAI ACGGC 3 cut(s) 825, 904, 1013
BcgI CGANNNNNNTGC 4 cut(s) 682, 716, 1314, 1348
BciT130I CCWGG 4 cut(s) 132, 705, 1164, 1371
BclI TGATCA 2 cut(s) 103, 1419
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 2 cut(s) 462, 485
BfaI CTAG 4 cut(s) 566, 647, 791, 1425
BfmI CTRYAG 1 cut(s) 1014
BisI GCNGC 6 cut(s) 32, 259, 321, 672, 954, 1154
BlsI GCNGC 6 cut(s) 33, 260, 322, 673, 955, 1155
BmcAI AGTACT 1 cut(s) 1271
Bme1390I CCNGG 5 cut(s) 132, 200, 705, 1164, 1371
Bme18I GGWCC 2 cut(s) 1319, 1355
BmgBI CACGTC 1 cut(s) 532
BmgT120I GGNCC 3 cut(s) 147, 1319, 1355
BmiI GGNNCC 5 cut(s) 406, 627, 654, 1152, 1326
BmrFI CCNGG 5 cut(s) 132, 200, 705, 1164, 1371
BmrI ACTGGG 1 cut(s) 1099
BmsI GCATC 7 cut(s) 3, 270, 496, 570, 743, 827, 1015
BmuI ACTGGG 1 cut(s) 1099
BplI GAGNNNNNCTC 2 cut(s) 1068, 1100
BpmI CTGGAG 2 cut(s) 104, 1258
Bpu10I CCTNAGC 1 cut(s) 139
BpuMI CCSGG 1 cut(s) 200
Bsa29I ATCGAT 2 cut(s) 786, 796
BsaAI YACGTR 2 cut(s) 293, 493
BsaBI GATNNNNATC 2 cut(s) 17, 792
BsaJI CCNNGG 2 cut(s) 1358, 1369
BsaWI WCCGGW 2 cut(s) 747, 1501
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 1163, 1349, 1493
Bse118I RCCGGY 2 cut(s) 401, 1321
Bse1I ACTGG 2 cut(s) 1094, 1241
Bse3DI GCAATG 3 cut(s) 681, 948, 1188
Bse8I GATNNNNATC 2 cut(s) 17, 792
BseAI TCCGGA 1 cut(s) 747
BseBI CCWGG 4 cut(s) 132, 705, 1164, 1371
BseCI ATCGAT 2 cut(s) 786, 796
BseDI CCNNGG 2 cut(s) 1358, 1369
BseGI GGATG 4 cut(s) 18, 511, 734, 1368
BseJI GATNNNNATC 2 cut(s) 17, 792
BseLI CCNNNNNNNGG 4 cut(s) 155, 1163, 1349, 1493
BseMI GCAATG 3 cut(s) 681, 948, 1188
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 2 cut(s) 1094, 1241
BseRI GAGGAG 5 cut(s) 443, 665, 793, 1329, 1365
BseSI GKGCMC 1 cut(s) 1370
BseX3I CGGCCG 1 cut(s) 889
BseXI GCAGC 4 cut(s) 18, 270, 683, 940
Bsh1285I CGRYCG 1 cut(s) 892
BshFI GGCC 4 cut(s) 148, 165, 376, 891
BshNI GGYRCC 1 cut(s) 1324
BshVI ATCGAT 2 cut(s) 786, 796
BsiEI CGRYCG 1 cut(s) 892
BsiSI CCGG 6 cut(s) 200, 324, 402, 748, 1322, 1502
BslFI GGGAC 1 cut(s) 182
BslI CCNNNNNNNGG 4 cut(s) 155, 1163, 1349, 1493
BsmAI GTCTC 2 cut(s) 462, 485
BsmFI GGGAC 1 cut(s) 182
BsnI GGCC 4 cut(s) 148, 165, 376, 891
Bsp1286I GDGCHC 1 cut(s) 1370
Bsp13I TCCGGA 1 cut(s) 747
Bsp143I GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
BspACI CCGC 4 cut(s) 82, 305, 321, 1154
BspANI GGCC 4 cut(s) 148, 165, 376, 891
BspCNI CTCAG 1 cut(s) 152
BspDI ATCGAT 2 cut(s) 786, 796
BspEI TCCGGA 1 cut(s) 747
BspLI GGNNCC 5 cut(s) 406, 627, 654, 1152, 1326
BspPI GGATC 6 cut(s) 233, 506, 620, 633, 762, 1274
BspT107I GGYRCC 1 cut(s) 1324
BsrDI GCAATG 3 cut(s) 681, 948, 1188
BsrFI RCCGGY 2 cut(s) 401, 1321
BsrI ACTGG 2 cut(s) 1094, 1241
BssAI RCCGGY 2 cut(s) 401, 1321
BssECI CCNNGG 2 cut(s) 1358, 1369
BssMI GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
BssSI CACGAG 1 cut(s) 425
Bst2BI CACGAG 1 cut(s) 425
Bst2UI CCWGG 4 cut(s) 132, 705, 1164, 1371
Bst4CI ACNGT 3 cut(s) 74, 479, 1018
Bst6I CTCTTC 1 cut(s) 1369
BstAPI GCANNNNNTGC 1 cut(s) 264
BstBAI YACGTR 2 cut(s) 293, 493
BstC8I GCNNGC 3 cut(s) 82, 403, 676
BstDEI CTNAG 2 cut(s) 139, 861
BstENI CCTNNNNNAGG 1 cut(s) 1491
BstF5I GGATG 4 cut(s) 18, 511, 734, 1368
BstKTI GATC 9 cut(s) 106, 228, 501, 628, 757, 790, 796, 1282, 1422
BstMAI GTCTC 2 cut(s) 462, 485
BstMBI GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
BstMCI CGRYCG 1 cut(s) 892
BstMWI GCNNNNNNNGC 4 cut(s) 264, 661, 731, 923
BstNI CCWGG 4 cut(s) 132, 705, 1164, 1371
BstSCI CCNGG 5 cut(s) 130, 198, 703, 1162, 1369
BstSFI CTRYAG 1 cut(s) 1014
BstSLI GKGCMC 1 cut(s) 1370
BstSNI TACGTA 1 cut(s) 493
BstV1I GCAGC 4 cut(s) 18, 270, 683, 940
BstX2I RGATCY 3 cut(s) 625, 754, 1279
BstYI RGATCY 3 cut(s) 625, 754, 1279
BstZI CGGCCG 1 cut(s) 889
Bsu15I ATCGAT 2 cut(s) 786, 796
BsuRI GGCC 4 cut(s) 148, 165, 376, 891
BsuTUI ATCGAT 2 cut(s) 786, 796
BtgZI GCGATG 2 cut(s) 898, 907
BtrI CACGTC 1 cut(s) 532
BtsCI GGATG 4 cut(s) 18, 511, 734, 1368
BtsIMutI CAGTG 2 cut(s) 306, 639
Cac8I GCNNGC 3 cut(s) 82, 403, 676
CaiI CAGNNNCTG 1 cut(s) 264
Cfr10I RCCGGY 2 cut(s) 401, 1321
Cfr13I GGNCC 3 cut(s) 147, 1319, 1355
ClaI ATCGAT 2 cut(s) 786, 796
Csp6I GTAC 3 cut(s) 315, 490, 1270
CviAII CATG 6 cut(s) 369, 502, 739, 994, 1119, 1408
CviQI GTAC 3 cut(s) 315, 490, 1270
DdeI CTNAG 2 cut(s) 139, 861
DpnI GATC 9 cut(s) 105, 227, 500, 627, 756, 789, 795, 1281, 1421
DpnII GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
DraIII CACNNNGTG 1 cut(s) 981
EaeI YGGCCR 1 cut(s) 889
EagI CGGCCG 1 cut(s) 889
Eam1104I CTCTTC 1 cut(s) 1369
EarI CTCTTC 1 cut(s) 1369
EclXI CGGCCG 1 cut(s) 889
Eco105I TACGTA 1 cut(s) 493
Eco147I AGGCCT 1 cut(s) 165
Eco32I GATATC 1 cut(s) 1208
Eco47I GGWCC 2 cut(s) 1319, 1355
Eco52I CGGCCG 1 cut(s) 889
Eco57I CTGAAG 1 cut(s) 117
EcoNI CCTNNNNNAGG 1 cut(s) 1491
EcoO109I RGGNCCY 1 cut(s) 1355
EcoRII CCWGG 4 cut(s) 130, 703, 1162, 1369
EcoRV GATATC 1 cut(s) 1208
EcoT22I ATGCAT 1 cut(s) 1413
FaeI CATG 6 cut(s) 372, 505, 742, 997, 1122, 1411
FaqI GGGAC 1 cut(s) 182
FatI CATG 6 cut(s) 368, 501, 738, 993, 1118, 1407
FauI CCCGC 1 cut(s) 89
FbaI TGATCA 2 cut(s) 103, 1419
FblI GTMKAC 1 cut(s) 943
Fnu4HI GCNGC 6 cut(s) 32, 259, 321, 672, 954, 1154
FokI GGATG 4 cut(s) 5, 518, 721, 1375
Fsp4HI GCNGC 6 cut(s) 32, 259, 321, 672, 954, 1154
FspBI CTAG 4 cut(s) 566, 647, 791, 1425
GluI GCNGC 6 cut(s) 32, 259, 321, 672, 954, 1154
GsuI CTGGAG 2 cut(s) 104, 1258
HaeIII GGCC 4 cut(s) 148, 165, 376, 891
HapII CCGG 6 cut(s) 200, 324, 402, 748, 1322, 1502
Hin1II CATG 6 cut(s) 372, 505, 742, 997, 1122, 1411
HinfI GANTC 8 cut(s) 296, 419, 431, 658, 783, 1213, 1396, 1428
HpaII CCGG 6 cut(s) 200, 324, 402, 748, 1322, 1502
HphI GGTGA 6 cut(s) 101, 170, 268, 967, 1106, 1477
Hpy166II GTNNAC 4 cut(s) 276, 315, 364, 944
Hpy188I TCNGA 9 cut(s) 177, 215, 409, 544, 823, 1006, 1189, 1212, 1362
Hpy188III TCNNGA 7 cut(s) 527, 748, 758, 791, 848, 1033, 1451
Hpy8I GTNNAC 4 cut(s) 276, 315, 364, 944
Hpy99I CGWCG 3 cut(s) 890, 1130, 1313
HpyAV CCTTC 8 cut(s) 155, 520, 598, 745, 895, 1067, 1196, 1435
HpyCH4III ACNGT 3 cut(s) 74, 479, 1018
HpyCH4IV ACGT 7 cut(s) 292, 492, 520, 531, 618, 966, 1125
HpyCH4V TGCA 5 cut(s) 267, 583, 742, 818, 1411
HpyF10VI GCNNNNNNNGC 4 cut(s) 264, 661, 731, 923
HpyF3I CTNAG 2 cut(s) 139, 861
HpySE526I ACGT 7 cut(s) 292, 492, 520, 531, 618, 966, 1125
Hsp92II CATG 6 cut(s) 372, 505, 742, 997, 1122, 1411
Kpn2I TCCGGA 1 cut(s) 747
KroI GCCGGC 1 cut(s) 401
KroNI GCCGGC 1 cut(s) 403
Ksp22I TGATCA 2 cut(s) 103, 1419
Kzo9I GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
LmnI GCTCC 5 cut(s) 123, 129, 410, 652, 1150
Lsp1109I GCAGC 4 cut(s) 18, 270, 683, 940
LweI GCATC 7 cut(s) 3, 270, 496, 570, 743, 827, 1015
MaeI CTAG 4 cut(s) 566, 647, 791, 1425
MaeII ACGT 7 cut(s) 292, 492, 520, 531, 618, 966, 1125
MaeIII GTNAC 1 cut(s) 1094
MalI GATC 9 cut(s) 105, 227, 500, 627, 756, 789, 795, 1281, 1421
MboI GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
MboII GAAGA 6 cut(s) 234, 601, 773, 1386, 1472, 1475
MflI RGATCY 3 cut(s) 625, 754, 1279
MhlI GDGCHC 1 cut(s) 1370
MluCI AATT 2 cut(s) 230, 841
MlyI GAGTC 1 cut(s) 440
MmeI TCCRAC 3 cut(s) 432, 522, 1212
Mph1103I ATGCAT 1 cut(s) 1413
MroI TCCGGA 1 cut(s) 747
MroNI GCCGGC 1 cut(s) 401
MroXI GAANNNNTTC 1 cut(s) 768
MseI TTAA 3 cut(s) 614, 935, 1391
MslI CAYNNNNRTG 2 cut(s) 598, 1531
MspI CCGG 6 cut(s) 200, 324, 402, 748, 1322, 1502
MspR9I CCNGG 5 cut(s) 132, 200, 705, 1164, 1371
MvaI CCWGG 4 cut(s) 132, 705, 1164, 1371
MwoI GCNNNNNNNGC 4 cut(s) 264, 661, 731, 923
NaeI GCCGGC 1 cut(s) 403
NciI CCSGG 1 cut(s) 200
NdeII GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
NgoMIV GCCGGC 1 cut(s) 401
NlaIII CATG 6 cut(s) 372, 505, 742, 997, 1122, 1411
NlaIV GGNNCC 5 cut(s) 406, 627, 654, 1152, 1326
NmuCI GTSAC 1 cut(s) 1094
NsiI ATGCAT 1 cut(s) 1413
PceI AGGCCT 1 cut(s) 165
PdiI GCCGGC 1 cut(s) 403
PdmI GAANNNNTTC 1 cut(s) 768
PfeI GAWTC 7 cut(s) 296, 419, 658, 783, 1213, 1396, 1428
PflMI CCANNNNNTGG 1 cut(s) 1163
PfoI TCCNGGA 2 cut(s) 198, 1162
PkrI GCNGC 6 cut(s) 33, 260, 322, 673, 955, 1155
PleI GAGTC 1 cut(s) 439
PpsI GAGTC 1 cut(s) 439
Ppu21I YACGTR 2 cut(s) 293, 493
PpuMI RGGWCCY 1 cut(s) 1355
Psp5II RGGWCCY 1 cut(s) 1355
Psp6I CCWGG 4 cut(s) 130, 703, 1162, 1369
PspGI CCWGG 4 cut(s) 130, 703, 1162, 1369
PspN4I GGNNCC 5 cut(s) 406, 627, 654, 1152, 1326
PspPI GGNCC 3 cut(s) 147, 1319, 1355
PspPPI RGGWCCY 1 cut(s) 1355
PstNI CAGNNNCTG 1 cut(s) 264
PsuI RGATCY 3 cut(s) 625, 754, 1279
RsaI GTAC 3 cut(s) 316, 491, 1271
RsaNI GTAC 3 cut(s) 315, 490, 1270
RseI CAYNNNNRTG 2 cut(s) 598, 1531
SaqAI TTAA 3 cut(s) 614, 935, 1391
SatI GCNGC 6 cut(s) 32, 259, 321, 672, 954, 1154
Sau3AI GATC 9 cut(s) 103, 225, 498, 625, 754, 787, 793, 1279, 1419
Sau96I GGNCC 3 cut(s) 147, 1319, 1355
ScaI AGTACT 1 cut(s) 1271
SchI GAGTC 1 cut(s) 440
ScrFI CCNGG 5 cut(s) 132, 200, 705, 1164, 1371
SduI GDGCHC 1 cut(s) 1370
SfaNI GCATC 7 cut(s) 3, 270, 496, 570, 743, 827, 1015
SfcI CTRYAG 1 cut(s) 1014
SinI GGWCC 2 cut(s) 1319, 1355
SmiMI CAYNNNNRTG 2 cut(s) 598, 1531
SnaBI TACGTA 1 cut(s) 493
Sse9I AATT 2 cut(s) 230, 841
SseBI AGGCCT 1 cut(s) 165
SsiI CCGC 4 cut(s) 82, 305, 321, 1154
SspMI CTAG 4 cut(s) 566, 647, 791, 1425
StuI AGGCCT 1 cut(s) 165
StyD4I CCNGG 5 cut(s) 130, 198, 703, 1162, 1369
TaaI ACNGT 3 cut(s) 74, 479, 1018
TaiI ACGT 7 cut(s) 295, 495, 523, 534, 621, 969, 1128
TaqI TCGA 7 cut(s) 439, 786, 796, 802, 1250, 1293, 1308
TasI AATT 2 cut(s) 230, 841
TatI WGTACW 2 cut(s) 314, 1269
TauI GCSGC 2 cut(s) 323, 1156
TfiI GAWTC 7 cut(s) 296, 419, 658, 783, 1213, 1396, 1428
Tru1I TTAA 3 cut(s) 614, 935, 1391
Tru9I TTAA 3 cut(s) 614, 935, 1391
TscAI CASTG 2 cut(s) 306, 639
TseFI GTSAC 1 cut(s) 1094
TseI GCWGC 4 cut(s) 31, 258, 671, 953
Tsp45I GTSAC 1 cut(s) 1094
TspDTI ATGAA 9 cut(s) 199, 670, 914, 961, 1050, 1124, 1215, 1241, 1396
TspGWI ACGGA 1 cut(s) 1326
TspRI CASTG 2 cut(s) 306, 639
Van91I CCANNNNNTGG 1 cut(s) 1163
VpaK11BI GGWCC 2 cut(s) 1319, 1355
XagI CCTNNNNNAGG 1 cut(s) 1491
XapI RAATTY 1 cut(s) 230
XbaI TCTAGA 1 cut(s) 790
XmiI GTMKAC 1 cut(s) 943
XmnI GAANNNNTTC 1 cut(s) 768
XspI CTAG 4 cut(s) 566, 647, 791, 1425
ZrmI AGTACT 1 cut(s) 1271
Zsp2I ATGCAT 1 cut(s) 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.