Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0000192

Physical Location & Seq

Genomic Coordinates Reverse (-)

43047191 .. 43049781

Gene Structure 2591 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1284800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGAGCACTTCTATCTGACCCTCCTCTTAGGGTTTGTCTCCTTCATCACTCTTTCTCTCTCCGTGCTCTTTTACCGGCACAGAGCGCAGTTCGTCGGCACCAACCTGCCGCCTGGCAAAGTTGGTTACCCAGTGATCGGCGAGACCTACCAGTTCCTAGCCACAGGATGGAAAGGTCACCCGGAGAAATTCATCTTCGACCGCATGACCAAGTACTCCTCCGAAGTGTTCAAGACCTCACTCATGGGCGAGAAGGCCGCCATCTTCTGCGGTGCAGCCTGCAACAAGTTCTTGTTCTCCAACGAGAACAAGCTCGTCACTGCATGGTGGCCCAGCTCAGTCAACAAGGTCTTCCCTTCTTCTTTGGAGACTTCTGCCAAGGAGGAGGCCAAGAAGATGAGAAAGATGCTTCCCAACTTCATGAAGCCCGAGGCTCTCCAGCGATACATCGGCATCATGGACACCGTCGCCCGACGCCACTTCGCTGAGGGCTGGGAAAACAAGAAGGAAGTTGAAGTCTTTCCCCTCGCCAAGAACTATACCTTTTGGCTTGCTGCACGGTTGTTTGTGAGCCTGGAGGACTCGGTTGAGATCGCCAAGTTAGGCGACCCGTTCGCAGTTTTGGCCTCGGGAATCATATCGATGCCTCTGGATTTCCCGGGGACTCCGTTTTACAAAGCGATCAAGGCGTCCAACTTCATCAGGGAGGAGCTGACGAAGATCATCAAGCAGAGGAAGATAGACTTGGCGGAGGGCAAAGCGTCGCCAACGCAAGATATATTGTCTCACATGTTGTTGTTGTGCGACGAGCACGGAAGTCACATGAAGGAACACGATATCGCGGATAAGATTTTGGGGCTGCTGATCGGTGGCCATGACACTGCTAGCGCTACCTGCACTTTTATTGTTAAGTATCTTGCCGAGCTTCCTCACATTTATGACGAAGTCTACAAGGAGCAAATGGAGGTCCTAAGCGCAAAAGCACCAGGGGACTTGTTGAACTGGGATGACCTACAGAAGATGAAATACTCATGGAACGTAGCTCAGGAAGTTCTCAGATTGGCTCCACCTCTTCAAGGAGCTTTCAGGGAAGCCTTATCTGACTTTGTCTTCAATGGTTTCACCATTCCAAAAGGCTGGAAGTTGTATTGGAGTGCAAATTCAACACACAAGAACGCAGCTTACTTCCCGGAACCATTCAAATTCGACCCTACAAGATTCGAAGGAAATGGTCCAGCACCATACACGTTTGTGCCCTTTGGAGGAGGTCCTAGGATGTGCCCCGGCAAAGAGTACGCCCGATTGGAAATCCTAGTGTTCATGCACAACTTGGTGAAGAGGTTCAAATGGGAAAAAGTTCTTCCCGACGAGCAGATCGTAGTTGACCCACTGCCCATGCCCGCCAAGGGACTCCCCGTCCGCCTTTTCCCTCACCCTAAGACAGCCACAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009987 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016134 GO:0016135 GO:0016137 GO:0016138 GO:0016491 GO:0016705 GO:0016709 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044237 GO:0044238 GO:0044255 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

485

Amino Acids

54.92

Weight (kDa)

8.77

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	37 - 452	1.3e-58	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36110 AT5G36110 AT5G36130 AT5G36140
fragaria_vesca	FvH4_2g39160 FvH4_3g15030 FvH4_3g38021 FvH4_3g38080 FvH4_4g00250 FvH4_4g01400 FvH4_5g18260 FvH4_5g18260 FvH4_5g29490 FvH4_7g03260 FvH4_7g12550 FvH4_7g12560 FvH4_7g14310 FvH4_7g14330
malus_domestica	MD04G1002500.v1.1 MD11G1006100.v1.1 MD11G1157200.v1.1 MD11G1157300.v1.1 MD13G1116400.v1.1 MD13G1219600.v1.1 MD13G1284800.v1.1 MD16G1278300.v1.1 MD17G1219500.v1.1
prunus_persica	Prupe.1G002500_v2.0.a1 Prupe.6G120400_v2.0.a1
pyrus_communis	pycom04g00270 pycom10g20130 pycom11g12750 pycom16g24900 pycom17g22420 pycom420g00590
rosa_chinensis	RchiOBHm_Chr1g0325391 RchiOBHm_Chr1g0340921 RchiOBHm_Chr1g0355301 RchiOBHm_Chr1g0355311 RchiOBHm_Chr1g0355331 RchiOBHm_Chr1g0355341 RchiOBHm_Chr2g0153901 RchiOBHm_Chr4g0384961 RchiOBHm_Chr4g0384991 RchiOBHm_Chr4g0393781 RchiOBHm_Chr4g0433801 RchiOBHm_Chr5g0024681 RchiOBHm_Chr5g0024711 RchiOBHm_Chr5g0024721 RchiOBHm_Chr5g0024791 RchiOBHm_Chr7g0177321 RchiOBHm_Chr7g0177351 RchiOBHm_Chr7g0177361
rosa_laevigata	RLG00000001838 RLG00000005543 RLG00000010261 RLG00000028154 RLG00000028157 RLG00000028158 RLG00000028162 RLG00000030142 RLG00000032812 RLG00000032813 RLG00000032814
rosa_multiflora	Rmu_co8235405.1_g000001 Rmu_co8395679.1_g000001 Rmu_co8439995.1_g000001 Rmu_sc0000999.1_g000011 Rmu_sc0001171.1_g000026 Rmu_sc0002766.1_g000009 Rmu_sc0003822.1_g000014 Rmu_sc0004135.1_g000001 Rmu_sc0004135.1_g000004 Rmu_sc0004135.1_g000006 Rmu_sc0004135.1_g000012 Rmu_sc0004135.1_g000017 Rmu_sc0004135.1_g000020 Rmu_sc0004637.1_g000001 Rmu_sc0005310.1_g000005 Rmu_sc0006151.1_g000002 Rmu_sc0007192.1_g000013 Rmu_sc0008633.1_g000002 Rmu_sc0020285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00054590 Rroxscaffold_2G00098180 Rroxscaffold_3G00234050 Rroxscaffold_3G00236820 Rroxscaffold_3G00275940 Rroxscaffold_4G00300500 Rroxscaffold_4G00300510 Rroxscaffold_5G00332950 Rroxscaffold_7G00188110
rosa_rugosa	Rorug01G0051800 Rorug01G0051900 Rorug01G0052200 Rorug01G0052300 Rorug01G0052300 Rorug01G0246500 Rorug01G0246500 Rorug01G0246600 Rorug02G0411000 Rorug03G0298400 Rorug03G0298400 Rorug06G0404900 Rorug06G0405200 Rorug07G0209500 Rorug07G0227800
rosa_samantha	Rh1AG066900 Rh1AG258800 Rh1AG259000 Rh1BG055200 Rh1BG055300 Rh1BG228400 Rh1BG228500 Rh1BG228600 Rh1BG228700 Rh1CG068300 Rh1CG242400 Rh1CG242600 Rh1CG242800 Rh1CG242900 Rh1CG243000 Rh1DG073000 Rh1DG256200 Rh1DG256300 Rh1DG256400 Rh1DG256500 Rh4AG002300 Rh4AG326300 Rh4BG001800 Rh4CG002200 Rh4DG001800 Rh5BG173900 Rh5CG190900 Rh5DG175500 Rh7AG004800 Rh7AG004900 Rh7AG349600 Rh7AG375800 Rh7BG004900 Rh7BG362800 Rh7CG004700 Rh7CG366800 Rh7CG394300 Rh7DG004600 Rh7DG004700 Rh7DG374000
rosa_wichuraiana	Rw0G008010 Rw0G008840 Rw1G022840 Rw1G022850 Rw4G000710 Rw4G028240 Rw4G028290 Rw5G015960 Rw7G000400 Rw7G029670 Rw7G031540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	114, 902
AccB1I	GGYRCC	1 cut(s)	98
AccB7I	CCANNNNNTGG	1 cut(s)	168
AccI	GTMKAC	1 cut(s)	948
AccII	CGCG	1 cut(s)	842
AciI	CCGC	8 cut(s)	110, 202, 258, 270, 749, 842, 1401, 1420
AcoI	YGGCCR	1 cut(s)	871
AcsI	RAATTY	3 cut(s)	188, 1159, 1202
AcyI	GRCGYC	2 cut(s)	475, 689
AfaI	GTAC	2 cut(s)	215, 1295
AfeI	AGCGCT	1 cut(s)	889
AfiI	CCNNNNNNNGG	5 cut(s)	137, 168, 1076, 1262, 1406
AflIII	ACRYGT	2 cut(s)	789, 1245
AgsI	TTSAA	8 cut(s)	232, 515, 1000, 1076, 1114, 1164, 1201, 1345
AhdI	GACNNNNNGTC	1 cut(s)	1415
AjnI	CCWGG	3 cut(s)	112, 573, 985
AjuI	GAANNNNNNNTTGG	2 cut(s)	728, 760
AleI	CACNNNNGTG	1 cut(s)	1250
AluBI	AGCT	7 cut(s)	313, 336, 712, 925, 1043, 1082, 1181
AluI	AGCT	7 cut(s)	313, 336, 712, 925, 1043, 1082, 1181
Alw21I	GWGCWC	3 cut(s)	9, 69, 813
Alw26I	GTCTC	4 cut(s)	43, 137, 362, 789
Ama87I	CYCGRG	3 cut(s)	428, 628, 658
Aor51HI	AGCGCT	1 cut(s)	889
AoxI	GGCC	5 cut(s)	255, 329, 387, 624, 871
ApeKI	GCWGC	4 cut(s)	275, 554, 859, 1178
ApoI	RAATTY	3 cut(s)	188, 1159, 1202
Asp700I	GAANNNNTTC	3 cut(s)	519, 1340, 1356
AspA2I	CCTAGG	1 cut(s)	1271
AspLEI	GCGC	3 cut(s)	88, 890, 977
AspS9I	GGNCC	4 cut(s)	330, 967, 1232, 1268
AsuC2I	CCSGG	5 cut(s)	182, 659, 660, 1190, 1284
AsuHPI	GGTGA	4 cut(s)	170, 1114, 1345, 1424
AsuII	TTCGAA	1 cut(s)	1221
AsuNHI	GCTAGC	1 cut(s)	884
AvaI	CYCGRG	3 cut(s)	428, 628, 658
AvaII	GGWCC	3 cut(s)	967, 1232, 1268
AvrII	CCTAGG	1 cut(s)	1271
BaeGI	GKGCMC	2 cut(s)	1257, 1283
BalI	TGGCCA	1 cut(s)	873
BanI	GGYRCC	1 cut(s)	98
BarI	GAAGNNNNNNTAC	2 cut(s)	1010, 1042
BbsI	GAAGAC	2 cut(s)	343, 1102
Bbv12I	GWGCWC	3 cut(s)	9, 69, 813
BbvCI	CCTCAGC	1 cut(s)	486
BbvI	GCAGC	4 cut(s)	287, 541, 846, 1190
BccI	CCATC	2 cut(s)	162, 269
BciT130I	CCWGG	3 cut(s)	114, 575, 987
BcnI	CCSGG	5 cut(s)	182, 659, 660, 1190, 1284
BcoDI	GTCTC	4 cut(s)	43, 137, 362, 789
BfaI	CTAG	4 cut(s)	158, 885, 1272, 1313
BfmI	CTRYAG	1 cut(s)	1013
BfoI	RGCGCY	1 cut(s)	891
BfuAI	ACCTGC	2 cut(s)	114, 902
BisI	GCNGC	6 cut(s)	110, 258, 276, 555, 860, 1179
BlnI	CCTAGG	1 cut(s)	1271
BlsI	GCNGC	6 cut(s)	111, 259, 277, 556, 861, 1180
BmcAI	AGTACT	1 cut(s)	215
Bme1390I	CCNGG	8 cut(s)	114, 182, 575, 659, 660, 987, 1190, 1284
Bme18I	GGWCC	3 cut(s)	967, 1232, 1268
BmeRI	GACNNNNNGTC	1 cut(s)	1415
BmeT110I	CYCGRG	3 cut(s)	428, 628, 658
BmgT120I	GGNCC	4 cut(s)	330, 967, 1232, 1268
BmiI	GGNNCC	3 cut(s)	100, 1065, 1194
BmrFI	CCNGG	8 cut(s)	114, 182, 575, 659, 660, 987, 1190, 1284
BmrI	ACTGGG	2 cut(s)	125, 1012
BmsI	GCATC	3 cut(s)	396, 462, 633
BmtI	GCTAGC	1 cut(s)	888
BmuI	ACTGGG	2 cut(s)	125, 1012
BpiI	GAAGAC	2 cut(s)	343, 1102
BpmI	CTGGAG	2 cut(s)	422, 596
Bpu10I	CCTNAGC	3 cut(s)	486, 971, 1044
Bpu14I	TTCGAA	1 cut(s)	1221
BpuMI	CCSGG	5 cut(s)	182, 659, 660, 1190, 1284
Bsa29I	ATCGAT	1 cut(s)	641
BsaHI	GRCGYC	2 cut(s)	475, 689
BsaI	GGTCTC	1 cut(s)	137
BsaJI	CCNNGG	9 cut(s)	378, 429, 627, 658, 659, 986, 1271, 1282, 1404
Bsc4I	CCNNNNNNNGG	5 cut(s)	137, 168, 1076, 1262, 1406
Bse118I	RCCGGY	1 cut(s)	75
Bse1I	ACTGG	3 cut(s)	131, 151, 1007
BseBI	CCWGG	3 cut(s)	114, 575, 987
BseCI	ATCGAT	1 cut(s)	641
BseDI	CCNNGG	9 cut(s)	378, 429, 627, 658, 659, 986, 1271, 1282, 1404
BseGI	GGATG	3 cut(s)	173, 1012, 1281
BseLI	CCNNNNNNNGG	5 cut(s)	137, 168, 1076, 1262, 1406
BseMII	CTCAG	4 cut(s)	351, 477, 1058, 1069
BseNI	ACTGG	3 cut(s)	131, 151, 1007
BseRI	GAGGAG	5 cut(s)	14, 208, 398, 722, 1278
BseSI	GKGCMC	2 cut(s)	1257, 1283
BseXI	GCAGC	4 cut(s)	287, 541, 846, 1190
BseYI	CCCAGC	2 cut(s)	332, 492
BsgI	GTGCAG	3 cut(s)	294, 540, 880
Bsh1236I	CGCG	1 cut(s)	842
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	5 cut(s)	257, 331, 389, 626, 873
BshNI	GGYRCC	1 cut(s)	98
BshVI	ATCGAT	1 cut(s)	641
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	3 cut(s)	9, 69, 813
BsiHKCI	CYCGRG	3 cut(s)	428, 628, 658
BsiSI	CCGG	5 cut(s)	76, 182, 659, 1190, 1284
BslFI	GGGAC	3 cut(s)	676, 1004, 1422
BslI	CCNNNNNNNGG	5 cut(s)	137, 168, 1076, 1262, 1406
BsmAI	GTCTC	4 cut(s)	43, 137, 362, 789
BsmFI	GGGAC	3 cut(s)	676, 1004, 1422
BsnI	GGCC	5 cut(s)	257, 331, 389, 626, 873
Bso31I	GGTCTC	1 cut(s)	137
BsoBI	CYCGRG	3 cut(s)	428, 628, 658
Bsp119I	TTCGAA	1 cut(s)	1221
Bsp1286I	GDGCHC	5 cut(s)	9, 69, 813, 1257, 1283
Bsp143I	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
BspACI	CCGC	8 cut(s)	110, 202, 258, 270, 749, 842, 1401, 1420
BspANI	GGCC	5 cut(s)	257, 331, 389, 626, 873
BspCNI	CTCAG	4 cut(s)	350, 478, 1057, 1068
BspDI	ATCGAT	1 cut(s)	641
BspFNI	CGCG	1 cut(s)	842
BspHI	TCATGA	1 cut(s)	420
BspLI	GGNNCC	3 cut(s)	100, 1065, 1194
BspMI	ACCTGC	2 cut(s)	114, 902
BspOI	GCTAGC	1 cut(s)	888
BspT104I	TTCGAA	1 cut(s)	1221
BspT107I	GGYRCC	1 cut(s)	98
BspTNI	GGTCTC	1 cut(s)	137
BsrFI	RCCGGY	1 cut(s)	75
BsrI	ACTGG	3 cut(s)	131, 151, 1007
BssAI	RCCGGY	1 cut(s)	75
BssECI	CCNNGG	9 cut(s)	378, 429, 627, 658, 659, 986, 1271, 1282, 1404
BssMI	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
BssNI	GRCGYC	2 cut(s)	475, 689
BssT1I	CCWWGG	3 cut(s)	378, 1271, 1404
Bst2UI	CCWGG	3 cut(s)	114, 575, 987
Bst4CI	ACNGT	2 cut(s)	466, 561
Bst6I	CTCTTC	2 cut(s)	1077, 1331
BstACI	GRCGYC	2 cut(s)	475, 689
BstBI	TTCGAA	1 cut(s)	1221
BstC8I	GCNNGC	4 cut(s)	280, 552, 886, 1401
BstDEI	CTNAG	7 cut(s)	28, 337, 486, 971, 1044, 1055, 1437
BstEII	GGTNACC	2 cut(s)	125, 176
BstENI	CCTNNNNNAGG	1 cut(s)	1074
BstF5I	GGATG	3 cut(s)	173, 1012, 1281
BstFNI	CGCG	1 cut(s)	842
BstH2I	RGCGCY	1 cut(s)	891
BstHHI	GCGC	3 cut(s)	88, 890, 977
BstKTI	GATC	6 cut(s)	138, 594, 684, 723, 867, 1377
BstMAI	GTCTC	4 cut(s)	43, 137, 362, 789
BstMBI	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	4 cut(s)	85, 623, 686, 894
BstNI	CCWGG	3 cut(s)	114, 575, 987
BstNSI	RCATGY	1 cut(s)	793
BstPI	GGTNACC	2 cut(s)	125, 176
BstSCI	CCNGG	8 cut(s)	112, 180, 573, 657, 658, 985, 1188, 1282
BstSFI	CTRYAG	1 cut(s)	1013
BstSLI	GKGCMC	2 cut(s)	1257, 1283
BstUI	CGCG	1 cut(s)	842
BstV1I	GCAGC	4 cut(s)	287, 541, 846, 1190
BstV2I	GAAGAC	2 cut(s)	343, 1102
BstXI	CCANNNNNNTGG	1 cut(s)	1137
Bsu15I	ATCGAT	1 cut(s)	641
BsuRI	GGCC	5 cut(s)	257, 331, 389, 626, 873
BsuTUI	ATCGAT	1 cut(s)	641
BtsCI	GGATG	3 cut(s)	173, 1012, 1281
BtsI	GCAGTG	3 cut(s)	318, 879, 1388
BtsIMutI	CAGTG	4 cut(s)	138, 318, 879, 1388
BveI	ACCTGC	2 cut(s)	114, 902
Cac8I	GCNNGC	4 cut(s)	280, 552, 886, 1401
CciI	TCATGA	1 cut(s)	420
CfoI	GCGC	3 cut(s)	88, 890, 977
Cfr10I	RCCGGY	1 cut(s)	75
Cfr13I	GGNCC	4 cut(s)	330, 967, 1232, 1268
Cfr9I	CCCGGG	1 cut(s)	658
ClaI	ATCGAT	1 cut(s)	641
CseI	GACGC	3 cut(s)	483, 678, 750
Csp6I	GTAC	2 cut(s)	214, 1294
CviQI	GTAC	2 cut(s)	214, 1294
DdeI	CTNAG	7 cut(s)	28, 337, 486, 971, 1044, 1055, 1437
DpnI	GATC	6 cut(s)	137, 593, 683, 722, 866, 1376
DpnII	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
DriI	GACNNNNNGTC	1 cut(s)	1415
EaeI	YGGCCR	1 cut(s)	871
Eam1104I	CTCTTC	2 cut(s)	1077, 1331
Eam1105I	GACNNNNNGTC	1 cut(s)	1415
EarI	CTCTTC	2 cut(s)	1077, 1331
EciI	GGCGGA	2 cut(s)	764, 1409
Eco130I	CCWWGG	3 cut(s)	378, 1271, 1404
Eco31I	GGTCTC	1 cut(s)	137
Eco32I	GATATC	1 cut(s)	838
Eco47I	GGWCC	3 cut(s)	967, 1232, 1268
Eco47III	AGCGCT	1 cut(s)	889
Eco88I	CYCGRG	3 cut(s)	428, 628, 658
Eco91I	GGTNACC	2 cut(s)	125, 176
EcoNI	CCTNNNNNAGG	1 cut(s)	1074
EcoO109I	RGGNCCY	2 cut(s)	967, 1268
EcoO65I	GGTNACC	2 cut(s)	125, 176
EcoRII	CCWGG	3 cut(s)	112, 573, 985
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	3 cut(s)	378, 1271, 1404
ErhI	CCWWGG	3 cut(s)	378, 1271, 1404
FalI	AAGNNNNNCTT	2 cut(s)	728, 760
FaqI	GGGAC	3 cut(s)	676, 1004, 1422
FauI	CCCGC	1 cut(s)	1408
FblI	GTMKAC	1 cut(s)	948
Fnu4HI	GCNGC	6 cut(s)	110, 258, 276, 555, 860, 1179
FokI	GGATG	3 cut(s)	180, 1019, 1288
Fsp4HI	GCNGC	6 cut(s)	110, 258, 276, 555, 860, 1179
FspBI	CTAG	4 cut(s)	158, 885, 1272, 1313
GlaI	GCGC	3 cut(s)	87, 889, 976
GluI	GCNGC	6 cut(s)	110, 258, 276, 555, 860, 1179
GsaI	CCCAGC	2 cut(s)	336, 496
GsuI	CTGGAG	2 cut(s)	422, 596
HaeII	RGCGCY	1 cut(s)	891
HaeIII	GGCC	5 cut(s)	257, 331, 389, 626, 873
HapII	CCGG	5 cut(s)	76, 182, 659, 1190, 1284
HgaI	GACGC	3 cut(s)	483, 678, 750
HhaI	GCGC	3 cut(s)	88, 890, 977
Hin1I	GRCGYC	2 cut(s)	475, 689
Hin6I	GCGC	3 cut(s)	86, 888, 975
HinP1I	GCGC	3 cut(s)	86, 888, 975
HincII	GTYRAC	2 cut(s)	343, 1384
HindII	GTYRAC	2 cut(s)	343, 1384
HinfI	GANTC	5 cut(s)	581, 633, 664, 1218, 1410
HpaII	CCGG	5 cut(s)	76, 182, 659, 1190, 1284
HphI	GGTGA	4 cut(s)	170, 1114, 1345, 1424
Hpy166II	GTNNAC	3 cut(s)	343, 949, 1384
Hpy188I	TCNGA	4 cut(s)	18, 223, 1058, 1102
Hpy188III	TCNNGA	6 cut(s)	232, 421, 630, 650, 1046, 1364
Hpy8I	GTNNAC	3 cut(s)	343, 949, 1384
Hpy99I	CGWCG	6 cut(s)	98, 470, 477, 766, 809, 1370
HpyAV	CCTTC	6 cut(s)	52, 247, 366, 499, 820, 1217
HpyCH4III	ACNGT	2 cut(s)	466, 561
HpyCH4IV	ACGT	2 cut(s)	1038, 1247
HpyCH4V	TGCA	7 cut(s)	275, 282, 323, 557, 897, 1157, 1324
HpyF10VI	GCNNNNNNNGC	4 cut(s)	85, 623, 686, 894
HpyF3I	CTNAG	7 cut(s)	28, 337, 486, 971, 1044, 1055, 1437
HpySE526I	ACGT	2 cut(s)	1038, 1247
Hsp92I	GRCGYC	2 cut(s)	475, 689
HspAI	GCGC	3 cut(s)	86, 888, 975
Kzo9I	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
LmnI	GCTCC	5 cut(s)	4, 709, 955, 1069, 1079
Lsp1109I	GCAGC	4 cut(s)	287, 541, 846, 1190
LweI	GCATC	3 cut(s)	396, 462, 633
MaeI	CTAG	4 cut(s)	158, 885, 1272, 1313
MaeII	ACGT	2 cut(s)	1038, 1247
MaeIII	GTNAC	4 cut(s)	125, 176, 316, 818
MalI	GATC	6 cut(s)	137, 593, 683, 722, 866, 1376
MboI	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
MhlI	GDGCHC	5 cut(s)	9, 69, 813, 1257, 1283
MlsI	TGGCCA	1 cut(s)	873
MluCI	AATT	3 cut(s)	188, 1159, 1202
MluNI	TGGCCA	1 cut(s)	873
MlyI	GAGTC	3 cut(s)	575, 658, 1404
MmeI	TCCRAC	2 cut(s)	324, 717
Mox20I	TGGCCA	1 cut(s)	873
MroXI	GAANNNNTTC	3 cut(s)	519, 1340, 1356
MscI	TGGCCA	1 cut(s)	873
MseI	TTAA	2 cut(s)	909, 1453
MslI	CAYNNNNRTG	3 cut(s)	641, 936, 1250
Msp20I	TGGCCA	1 cut(s)	873
MspI	CCGG	5 cut(s)	76, 182, 659, 1190, 1284
MspR9I	CCNGG	8 cut(s)	114, 182, 575, 659, 660, 987, 1190, 1284
MvaI	CCWGG	3 cut(s)	114, 575, 987
MvnI	CGCG	1 cut(s)	842
MwoI	GCNNNNNNNGC	4 cut(s)	85, 623, 686, 894
NciI	CCSGG	5 cut(s)	182, 659, 660, 1190, 1284
NdeII	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
NheI	GCTAGC	1 cut(s)	884
NlaIV	GGNNCC	3 cut(s)	100, 1065, 1194
NmeAIII	GCCGAG	1 cut(s)	946
NmuCI	GTSAC	3 cut(s)	176, 316, 818
NspI	RCATGY	1 cut(s)	793
NspV	TTCGAA	1 cut(s)	1221
OliI	CACNNNNGTG	1 cut(s)	1250
PagI	TCATGA	1 cut(s)	420
PciI	ACATGT	1 cut(s)	789
PcsI	WCGNNNNNNNCGW	1 cut(s)	1374
PdmI	GAANNNNTTC	3 cut(s)	519, 1340, 1356
PfeI	GAWTC	2 cut(s)	633, 1218
PflFI	GACNNNGTC	3 cut(s)	464, 944, 1106
PflMI	CCANNNNNTGG	1 cut(s)	168
PfoI	TCCNGGA	1 cut(s)	1188
PkrI	GCNGC	6 cut(s)	111, 259, 277, 556, 861, 1180
PleI	GAGTC	3 cut(s)	575, 658, 1404
PpsI	GAGTC	3 cut(s)	575, 658, 1404
PpuMI	RGGWCCY	2 cut(s)	967, 1268
PscI	ACATGT	1 cut(s)	789
Psp5II	RGGWCCY	2 cut(s)	967, 1268
Psp6I	CCWGG	3 cut(s)	112, 573, 985
PspEI	GGTNACC	2 cut(s)	125, 176
PspFI	CCCAGC	2 cut(s)	332, 492
PspGI	CCWGG	3 cut(s)	112, 573, 985
PspN4I	GGNNCC	3 cut(s)	100, 1065, 1194
PspPI	GGNCC	4 cut(s)	330, 967, 1232, 1268
PspPPI	RGGWCCY	2 cut(s)	967, 1268
PsrI	GAACNNNNNNTAC	2 cut(s)	1166, 1198
PsyI	GACNNNGTC	3 cut(s)	464, 944, 1106
RsaI	GTAC	2 cut(s)	215, 1295
RsaNI	GTAC	2 cut(s)	214, 1294
RseI	CAYNNNNRTG	3 cut(s)	641, 936, 1250
SaqAI	TTAA	2 cut(s)	909, 1453
SatI	GCNGC	6 cut(s)	110, 258, 276, 555, 860, 1179
Sau3AI	GATC	6 cut(s)	135, 591, 681, 720, 864, 1374
Sau96I	GGNCC	4 cut(s)	330, 967, 1232, 1268
ScaI	AGTACT	1 cut(s)	215
SchI	GAGTC	3 cut(s)	575, 658, 1404
ScrFI	CCNGG	8 cut(s)	114, 182, 575, 659, 660, 987, 1190, 1284
SduI	GDGCHC	5 cut(s)	9, 69, 813, 1257, 1283
SfaNI	GCATC	3 cut(s)	396, 462, 633
SfcI	CTRYAG	1 cut(s)	1013
SfuI	TTCGAA	1 cut(s)	1221
SinI	GGWCC	3 cut(s)	967, 1232, 1268
SmaI	CCCGGG	1 cut(s)	660
SmiMI	CAYNNNNRTG	3 cut(s)	641, 936, 1250
Sse9I	AATT	3 cut(s)	188, 1159, 1202
SsiI	CCGC	8 cut(s)	110, 202, 258, 270, 749, 842, 1401, 1420
SspMI	CTAG	4 cut(s)	158, 885, 1272, 1313
StyD4I	CCNGG	8 cut(s)	112, 180, 573, 657, 658, 985, 1188, 1282
StyI	CCWWGG	3 cut(s)	378, 1271, 1404
TaaI	ACNGT	2 cut(s)	466, 561
TaiI	ACGT	2 cut(s)	1041, 1250
TaqI	TCGA	4 cut(s)	198, 641, 1206, 1221
TasI	AATT	3 cut(s)	188, 1159, 1202
TatI	WGTACW	1 cut(s)	213
TauI	GCSGC	2 cut(s)	112, 260
TfiI	GAWTC	2 cut(s)	633, 1218
Tru1I	TTAA	2 cut(s)	909, 1453
Tru9I	TTAA	2 cut(s)	909, 1453
TscAI	CASTG	4 cut(s)	138, 325, 886, 1395
TseFI	GTSAC	3 cut(s)	176, 316, 818
TseI	GCWGC	4 cut(s)	275, 554, 859, 1178
Tsp45I	GTSAC	3 cut(s)	176, 316, 818
TspDTI	ATGAA	8 cut(s)	34, 181, 409, 437, 688, 839, 1037, 1309
TspGWI	ACGGA	3 cut(s)	52, 657, 828
TspMI	CCCGGG	1 cut(s)	658
TspRI	CASTG	4 cut(s)	138, 325, 886, 1395
Tth111I	GACNNNGTC	3 cut(s)	464, 944, 1106
Van91I	CCANNNNNTGG	1 cut(s)	168
VpaK11BI	GGWCC	3 cut(s)	967, 1232, 1268
XagI	CCTNNNNNAGG	1 cut(s)	1074
XapI	RAATTY	3 cut(s)	188, 1159, 1202
XceI	RCATGY	1 cut(s)	793
XmaI	CCCGGG	1 cut(s)	658
XmaJI	CCTAGG	1 cut(s)	1271
XmiI	GTMKAC	1 cut(s)	948
XmnI	GAANNNNTTC	3 cut(s)	519, 1340, 1356
XspI	CTAG	4 cut(s)	158, 885, 1272, 1313
ZrmI	AGTACT	1 cut(s)	215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.